scaffold_50, scaffold_50 (supercontig) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	scaffold_50
Unique Name	scaffold_50
Type	supercontig
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	135421
Alignment location	jgi.p\|Nanoce1779_2\|341440:16836..18043 -
Alignment location	jgi.p\|Nanoce1779_2\|341440:16836..18043 -
Alignment location	CDS_10209:17425..18009 -
Alignment location	CDS_10209:16927..17142 -
Alignment location	jgi.p\|Nanoce1779_2\|341564:28967..33116 +
Alignment location	jgi.p\|Nanoce1779_2\|341564:28967..33116 +
Alignment location	CDS_10214:29053..29276 +
Alignment location	CDS_10214:29412..29504 +
Alignment location	CDS_10214:29636..29917 +
Alignment location	CDS_10214:30117..30204 +
Alignment location	CDS_10214:30356..30532 +
Alignment location	CDS_10214:30679..30843 +
Alignment location	CDS_10214:30963..31190 +
Alignment location	CDS_10214:31509..31666 +
Alignment location	CDS_10214:31817..31931 +
Alignment location	CDS_10214:31971..32534 +
Alignment location	jgi.p\|Nanoce1779_2\|341914:50779..53580 +
Alignment location	jgi.p\|Nanoce1779_2\|341914:50779..53580 +
Alignment location	CDS_10222:50867..50923 +
Alignment location	CDS_10222:51285..51395 +
Alignment location	CDS_10222:51576..51707 +
Alignment location	CDS_10222:51986..52246 +
Alignment location	CDS_10222:52418..52468 +
Alignment location	CDS_10222:52800..52900 +
Alignment location	CDS_10222:53031..53063 +
Alignment location	CDS_10222:53197..53203 +
Alignment location	jgi.p\|Nanoce1779_2\|342053:68124..70904 -
Alignment location	jgi.p\|Nanoce1779_2\|342053:68124..70904 -
Alignment location	CDS_10227:70446..70808 -
Alignment location	CDS_10227:70225..70364 -
Alignment location	CDS_10227:69963..70040 -
Alignment location	CDS_10227:69587..69713 -
Alignment location	CDS_10227:69421..69467 -
Alignment location	CDS_10227:69142..69311 -
Alignment location	CDS_10227:68864..68979 -
Alignment location	CDS_10227:68597..68661 -
Alignment location	CDS_10227:68176..68434 -
Alignment location	jgi.p\|Nanoce1779_2\|342113:53258..56956 -
Alignment location	jgi.p\|Nanoce1779_2\|342113:53258..56956 -
Alignment location	CDS_10223:56761..56845 -
Alignment location	CDS_10223:56295..56557 -
Alignment location	CDS_10223:55732..55830 -
Alignment location	CDS_10223:55272..55481 -
Alignment location	CDS_10223:55014..55111 -
Alignment location	CDS_10223:54531..54835 -
Alignment location	CDS_10223:54288..54340 -
Alignment location	CDS_10223:54025..54102 -
Alignment location	jgi.p\|Nanoce1779_2\|342474:82997..83889 +
Alignment location	jgi.p\|Nanoce1779_2\|342474:82997..83889 +
Alignment location	CDS_10234:83334..83789 +
Alignment location	jgi.p\|Nanoce1779_2\|342551:80239..81815 +
Alignment location	jgi.p\|Nanoce1779_2\|342551:80239..81815 +
Alignment location	CDS_10233:80347..80740 +
Alignment location	CDS_10233:80974..81098 +
Alignment location	CDS_10233:81224..81679 +
Alignment location	jgi.p\|Nanoce1779_2\|342752:105374..106680 -
Alignment location	jgi.p\|Nanoce1779_2\|342752:105374..106680 -
Alignment location	CDS_10241:106507..106509 -
Alignment location	CDS_10241:106150..106324 -
Alignment location	CDS_10241:105579..105931 -
Alignment location	jgi.p\|Nanoce1779_2\|343096:114625..115781 +
Alignment location	jgi.p\|Nanoce1779_2\|343096:114625..115781 +
Alignment location	CDS_10244:114787..115475 +
Alignment location	CDS_10244:115595..115649 +
Alignment location	jgi.p\|Nanoce1779_2\|343135:122883..127466 +
Alignment location	jgi.p\|Nanoce1779_2\|343135:122883..127466 +
Alignment location	CDS_10248:123243..123324 +
Alignment location	CDS_10248:123505..123673 +
Alignment location	CDS_10248:123810..123894 +
Alignment location	CDS_10248:123992..124069 +
Alignment location	CDS_10248:124218..124377 +
Alignment location	CDS_10248:124569..124618 +
Alignment location	CDS_10248:124736..124828 +
Alignment location	CDS_10248:124957..125153 +
Alignment location	CDS_10248:125527..125698 +
Alignment location	CDS_10248:125822..125942 +
Alignment location	CDS_10248:126164..126365 +
Alignment location	CDS_10248:126608..126769 +
Alignment location	CDS_10248:126892..127000 +
Alignment location	CDS_10248:127161..127238 +
Alignment location	jgi.p\|Nanoce1779_2\|569709:78122..78506 +
Alignment location	jgi.p\|Nanoce1779_2\|569709:78122..78506 +
Alignment location	CDS_10232:78122..78312 +
Alignment location	CDS_10232:78356..78506 +
Alignment location	jgi.p\|Nanoce1779_2\|569710:84111..85473 +
Alignment location	jgi.p\|Nanoce1779_2\|569710:84111..85473 +
Alignment location	CDS_10235:84111..84130 +
Alignment location	CDS_10235:84340..84474 +
Alignment location	CDS_10235:84639..84728 +
Alignment location	CDS_10235:84869..85078 +
Alignment location	CDS_10235:85227..85473 +
Alignment location	jgi.p\|Nanoce1779_2\|610418:3086..4500 -
Alignment location	jgi.p\|Nanoce1779_2\|610418:3086..4500 -
Alignment location	CDS_10206:3516..3665 -
Alignment location	CDS_10206:3094..3402 -
Alignment location	jgi.p\|Nanoce1779_2\|610444:33635..34738 +
Alignment location	jgi.p\|Nanoce1779_2\|610444:33635..34738 +
Alignment location	CDS_10215:33823..33863 +
Alignment location	CDS_10215:34120..34300 +
Alignment location	jgi.p\|Nanoce1779_2\|610445:34726..36019 +
Alignment location	jgi.p\|Nanoce1779_2\|610445:34726..36019 +
Alignment location	CDS_10216:34750..34820 +
Alignment location	CDS_10216:35134..35596 +
Alignment location	jgi.p\|Nanoce1779_2\|610447:36020..38337 +
Alignment location	jgi.p\|Nanoce1779_2\|610447:36020..38337 +
Alignment location	CDS_10217:36052..38052 +
Alignment location	jgi.p\|Nanoce1779_2\|610451:38332..39873 -
Alignment location	jgi.p\|Nanoce1779_2\|610451:38332..39873 -
Alignment location	CDS_10218:38675..39292 -
Alignment location	CDS_10218:38467..38538 -
Alignment location	jgi.p\|Nanoce1779_2\|610462:44898..45348 -
Alignment location	jgi.p\|Nanoce1779_2\|610462:44898..45348 -
Alignment location	CDS_10220:44901..45335 -
Alignment location	jgi.p\|Nanoce1779_2\|610486:59283..60328 +
Alignment location	jgi.p\|Nanoce1779_2\|610486:59283..60328 +
Alignment location	CDS_10224:59289..59393 +
Alignment location	CDS_10224:59632..59727 +
Alignment location	CDS_10224:60107..60187 +
Alignment location	jgi.p\|Nanoce1779_2\|610492:64010..68391 +
Alignment location	jgi.p\|Nanoce1779_2\|610492:64010..68391 +
Alignment location	CDS_10226:64714..64760 +
Alignment location	CDS_10226:64932..65055 +
Alignment location	CDS_10226:65473..65657 +
Alignment location	CDS_10226:65841..65902 +
Alignment location	CDS_10226:66066..66163 +
Alignment location	CDS_10226:66367..66510 +
Alignment location	CDS_10226:66740..66886 +
Alignment location	CDS_10226:67108..67224 +
Alignment location	CDS_10226:67558..67669 +
Alignment location	CDS_10226:67806..67906 +
Alignment location	jgi.p\|Nanoce1779_2\|610497:70684..71220 -
Alignment location	jgi.p\|Nanoce1779_2\|610497:70684..71220 -
Alignment location	CDS_10228:70929..71129 -
Alignment location	jgi.p\|Nanoce1779_2\|610501:75515..75814 -
Alignment location	jgi.p\|Nanoce1779_2\|610501:75515..75814 -
Alignment location	CDS_10230:75536..75796 -
Alignment location	jgi.p\|Nanoce1779_2\|610505:76776..77532 -
Alignment location	jgi.p\|Nanoce1779_2\|610505:76776..77532 -
Alignment location	CDS_10231:77129..77495 -
Alignment location	CDS_10231:76842..76903 -
Alignment location	jgi.p\|Nanoce1779_2\|610518:85612..86757 -
Alignment location	jgi.p\|Nanoce1779_2\|610518:85612..86757 -
Alignment location	CDS_10236:85756..86178 -
Alignment location	jgi.p\|Nanoce1779_2\|610537:103814..105246 +
Alignment location	jgi.p\|Nanoce1779_2\|610537:103814..105246 +
Alignment location	CDS_10240:104059..105168 +
Alignment location	jgi.p\|Nanoce1779_2\|610542:112157..113802 +
Alignment location	jgi.p\|Nanoce1779_2\|610542:112157..113802 +
Alignment location	CDS_10243:112211..112318 +
Alignment location	CDS_10243:112443..112544 +
Alignment location	CDS_10243:112674..112819 +
Alignment location	CDS_10243:112958..113022 +
Alignment location	CDS_10243:113229..113308 +
Alignment location	CDS_10243:113550..113696 +
Alignment location	jgi.p\|Nanoce1779_2\|610548:116905..119284 -
Alignment location	jgi.p\|Nanoce1779_2\|610548:116905..119284 -
Alignment location	CDS_10245:118958..119109 -
Alignment location	CDS_10245:118387..118521 -
Alignment location	CDS_10245:118196..118256 -
Alignment location	CDS_10245:117866..118041 -
Alignment location	CDS_10245:117467..117659 -
Alignment location	CDS_10245:117023..117298 -
Alignment location	jgi.p\|Nanoce1779_2\|610552:119399..120106 +
Alignment location	jgi.p\|Nanoce1779_2\|610552:119399..120106 +
Alignment location	CDS_10246:119423..119735 +
Alignment location	CDS_10246:119845..119894 +
Alignment location	jgi.p\|Nanoce1779_2\|624180:94833..97851 -
Alignment location	jgi.p\|Nanoce1779_2\|624180:94833..97851 -
Alignment location	CDS_10238:97785..97851 -
Alignment location	CDS_10238:95993..96169 -
Alignment location	CDS_10238:95775..95845 -
Alignment location	CDS_10238:95258..95558 -
Alignment location	CDS_10238:94833..94852 -
Alignment location	jgi.p\|Nanoce1779_2\|633973:22902..23630 -
Alignment location	jgi.p\|Nanoce1779_2\|633973:22902..23630 -
Alignment location	CDS_10211:23423..23434 -
Alignment location	CDS_10211:22902..23249 -
Alignment location	jgi.p\|Nanoce1779_2\|633974:23970..24536 -
Alignment location	jgi.p\|Nanoce1779_2\|633974:23970..24536 -
Alignment location	CDS_10212:24370..24481 -
Alignment location	CDS_10212:23970..24253 -
Alignment location	jgi.p\|Nanoce1779_2\|633981:46501..53599 +
Alignment location	jgi.p\|Nanoce1779_2\|633981:46501..53599 +
Alignment location	CDS_10221:46773..47006 +
Alignment location	CDS_10221:47290..47375 +
Alignment location	CDS_10221:47508..47673 +
Alignment location	CDS_10221:47871..47978 +
Alignment location	CDS_10221:48148..48216 +
Alignment location	CDS_10221:48409..48510 +
Alignment location	CDS_10221:48715..48919 +
Alignment location	CDS_10221:49287..49540 +
Alignment location	jgi.p\|Nanoce1779_2\|633988:100629..103450 +
Alignment location	jgi.p\|Nanoce1779_2\|633988:100629..103450 +
Alignment location	CDS_10239:100629..100680 +
Alignment location	CDS_10239:100894..101103 +
Alignment location	CDS_10239:101208..101291 +
Alignment location	CDS_10239:101547..101662 +
Alignment location	CDS_10239:102915..103298 +
Alignment location	jgi.p\|Nanoce1779_2\|643172:60835..64371 -
Alignment location	jgi.p\|Nanoce1779_2\|643172:60835..64371 -
Alignment location	CDS_10225:64195..64371 -
Alignment location	CDS_10225:63141..63209 -
Alignment location	CDS_10225:62787..62987 -
Alignment location	CDS_10225:62237..62438 -
Alignment location	CDS_10225:61910..61971 -
Alignment location	CDS_10225:61635..61696 -
Alignment location	CDS_10225:61335..61497 -
Alignment location	CDS_10225:60835..60930 -
Alignment location	jgi.p\|Nanoce1779_2\|674655:684..2132 -
Alignment location	jgi.p\|Nanoce1779_2\|674655:684..2132 -
Alignment location	CDS_10205:1755..2118 -
Alignment location	CDS_10205:1491..1529 -
Alignment location	CDS_10205:1256..1302 -
Alignment location	CDS_10205:795..1043 -
Alignment location	jgi.p\|Nanoce1779_2\|674658:6913..13449 -
Alignment location	jgi.p\|Nanoce1779_2\|674658:6913..13449 -
Alignment location	CDS_10207:12411..12724 -
Alignment location	CDS_10207:12065..12262 -
Alignment location	CDS_10207:11768..11818 -
Alignment location	CDS_10207:11520..11584 -
Alignment location	CDS_10207:11158..11258 -
Alignment location	CDS_10207:10858..10924 -
Alignment location	CDS_10207:10588..10707 -
Alignment location	CDS_10207:10228..10384 -
Alignment location	CDS_10207:9908..10001 -
Alignment location	CDS_10207:9071..9159 -
Alignment location	CDS_10207:8902..8968 -
Alignment location	CDS_10207:8644..8712 -
Alignment location	CDS_10207:8279..8340 -
Alignment location	CDS_10207:7805..8017 -
Alignment location	CDS_10207:7601..7679 -
Alignment location	CDS_10207:7280..7407 -
Alignment location	CDS_10207:6913..7099 -
Alignment location	jgi.p\|Nanoce1779_2\|674661:21348..22607 +
Alignment location	jgi.p\|Nanoce1779_2\|674661:21348..22607 +
Alignment location	CDS_10210:21672..21764 +
Alignment location	CDS_10210:22044..22261 +
Alignment location	CDS_10210:22400..22541 +
Alignment location	jgi.p\|Nanoce1779_2\|674666:40069..42193 +
Alignment location	jgi.p\|Nanoce1779_2\|674666:40069..42193 +
Alignment location	CDS_10219:40154..40190 +
Alignment location	CDS_10219:40288..40420 +
Alignment location	CDS_10219:41264..41323 +
Alignment location	CDS_10219:41956..42037 +
Alignment location	jgi.p\|Nanoce1779_2\|674674:73128..75533 -
Alignment location	jgi.p\|Nanoce1779_2\|674674:73128..75533 -
Alignment location	CDS_10229:75283..75381 -
Alignment location	CDS_10229:75111..75210 -
Alignment location	CDS_10229:74802..74938 -
Alignment location	CDS_10229:74497..74574 -
Alignment location	CDS_10229:74172..74286 -
Alignment location	CDS_10229:73865..73947 -
Alignment location	CDS_10229:73566..73613 -
Alignment location	CDS_10229:73130..73321 -
Alignment location	jgi.p\|Nanoce1779_2\|674676:86932..89641 -
Alignment location	jgi.p\|Nanoce1779_2\|674676:86932..89641 -
Alignment location	CDS_10237:86982..88754 -
Alignment location	jgi.p\|Nanoce1779_2\|674681:110944..112006 +
Alignment location	jgi.p\|Nanoce1779_2\|674681:110944..112006 +
Alignment location	CDS_10242:110944..111058 +
Alignment location	CDS_10242:111256..111461 +
Alignment location	CDS_10242:111564..111692 +
Alignment location	CDS_10242:111824..112006 +
Alignment location	jgi.p\|Nanoce1779_2\|341440:16927..18009 -
Alignment location	jgi.p\|Nanoce1779_2\|341564:29053..32534 +
Alignment location	jgi.p\|Nanoce1779_2\|341914:50867..53203 +
Alignment location	jgi.p\|Nanoce1779_2\|342053:68176..70808 -
Alignment location	jgi.p\|Nanoce1779_2\|342113:54025..56845 -
Alignment location	jgi.p\|Nanoce1779_2\|342474:83334..83789 +
Alignment location	jgi.p\|Nanoce1779_2\|342551:80347..81679 +
Alignment location	jgi.p\|Nanoce1779_2\|342752:105579..106509 -
Alignment location	jgi.p\|Nanoce1779_2\|343096:114787..115649 +
Alignment location	jgi.p\|Nanoce1779_2\|343135:123243..127238 +
Alignment location	jgi.p\|Nanoce1779_2\|569709:78122..78506 +
Alignment location	jgi.p\|Nanoce1779_2\|569710:84111..85473 +
Alignment location	jgi.p\|Nanoce1779_2\|610418:3094..3665 -
Alignment location	jgi.p\|Nanoce1779_2\|610444:33823..34300 +
Alignment location	jgi.p\|Nanoce1779_2\|610445:34750..35596 +
Alignment location	jgi.p\|Nanoce1779_2\|610447:36052..38052 +
Alignment location	jgi.p\|Nanoce1779_2\|610451:38467..39292 -
Alignment location	jgi.p\|Nanoce1779_2\|610462:44901..45335 -
Alignment location	jgi.p\|Nanoce1779_2\|610486:59289..60187 +
Alignment location	jgi.p\|Nanoce1779_2\|610492:64714..67906 +
Alignment location	jgi.p\|Nanoce1779_2\|610497:70929..71129 -
Alignment location	jgi.p\|Nanoce1779_2\|610501:75536..75796 -
Alignment location	jgi.p\|Nanoce1779_2\|610505:76842..77495 -
Alignment location	jgi.p\|Nanoce1779_2\|610518:85756..86178 -
Alignment location	jgi.p\|Nanoce1779_2\|610537:104059..105168 +
Alignment location	jgi.p\|Nanoce1779_2\|610542:112211..113696 +
Alignment location	jgi.p\|Nanoce1779_2\|610548:117023..119109 -
Alignment location	jgi.p\|Nanoce1779_2\|610552:119423..119894 +
Alignment location	jgi.p\|Nanoce1779_2\|624180:94833..97851 -
Alignment location	jgi.p\|Nanoce1779_2\|633973:22902..23434 -
Alignment location	jgi.p\|Nanoce1779_2\|633974:23970..24481 -
Alignment location	jgi.p\|Nanoce1779_2\|633981:46773..49540 +
Alignment location	jgi.p\|Nanoce1779_2\|633988:100629..103298 +
Alignment location	jgi.p\|Nanoce1779_2\|643172:60835..64371 -
Alignment location	jgi.p\|Nanoce1779_2\|674655:795..2118 -
Alignment location	jgi.p\|Nanoce1779_2\|674658:6913..12724 -
Alignment location	jgi.p\|Nanoce1779_2\|674661:21672..22541 +
Alignment location	jgi.p\|Nanoce1779_2\|674666:40154..42037 +
Alignment location	jgi.p\|Nanoce1779_2\|674674:73130..75381 -
Alignment location	jgi.p\|Nanoce1779_2\|674676:86982..88754 -
Alignment location	jgi.p\|Nanoce1779_2\|674681:110944..112006 +
Alignment location	ncniL073:685..127466 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
jgi.p\|Nanoce1779_2\|341440	gene	jgi.p\|Nanoce1779_2\|341440:16836..18043 -
jgi.p\|Nanoce1779_2\|341440	mRNA	jgi.p\|Nanoce1779_2\|341440:16836..18043 -
CDS_10209	CDS	CDS_10209:17425..18009 -
CDS_10209	CDS	CDS_10209:16927..17142 -
jgi.p\|Nanoce1779_2\|341564	gene	jgi.p\|Nanoce1779_2\|341564:28967..33116 +
jgi.p\|Nanoce1779_2\|341564	mRNA	jgi.p\|Nanoce1779_2\|341564:28967..33116 +
CDS_10214	CDS	CDS_10214:29053..29276 +
CDS_10214	CDS	CDS_10214:29412..29504 +
CDS_10214	CDS	CDS_10214:29636..29917 +
CDS_10214	CDS	CDS_10214:30117..30204 +
CDS_10214	CDS	CDS_10214:30356..30532 +
CDS_10214	CDS	CDS_10214:30679..30843 +
CDS_10214	CDS	CDS_10214:30963..31190 +
CDS_10214	CDS	CDS_10214:31509..31666 +
CDS_10214	CDS	CDS_10214:31817..31931 +
CDS_10214	CDS	CDS_10214:31971..32534 +
jgi.p\|Nanoce1779_2\|341914	gene	jgi.p\|Nanoce1779_2\|341914:50779..53580 +
jgi.p\|Nanoce1779_2\|341914	mRNA	jgi.p\|Nanoce1779_2\|341914:50779..53580 +
CDS_10222	CDS	CDS_10222:50867..50923 +
CDS_10222	CDS	CDS_10222:51285..51395 +
CDS_10222	CDS	CDS_10222:51576..51707 +
CDS_10222	CDS	CDS_10222:51986..52246 +
CDS_10222	CDS	CDS_10222:52418..52468 +
CDS_10222	CDS	CDS_10222:52800..52900 +
CDS_10222	CDS	CDS_10222:53031..53063 +
CDS_10222	CDS	CDS_10222:53197..53203 +
jgi.p\|Nanoce1779_2\|342053	gene	jgi.p\|Nanoce1779_2\|342053:68124..70904 -
jgi.p\|Nanoce1779_2\|342053	mRNA	jgi.p\|Nanoce1779_2\|342053:68124..70904 -
CDS_10227	CDS	CDS_10227:70446..70808 -
CDS_10227	CDS	CDS_10227:70225..70364 -
CDS_10227	CDS	CDS_10227:69963..70040 -
CDS_10227	CDS	CDS_10227:69587..69713 -
CDS_10227	CDS	CDS_10227:69421..69467 -
CDS_10227	CDS	CDS_10227:69142..69311 -
CDS_10227	CDS	CDS_10227:68864..68979 -
CDS_10227	CDS	CDS_10227:68597..68661 -
CDS_10227	CDS	CDS_10227:68176..68434 -
jgi.p\|Nanoce1779_2\|342113	gene	jgi.p\|Nanoce1779_2\|342113:53258..56956 -
jgi.p\|Nanoce1779_2\|342113	mRNA	jgi.p\|Nanoce1779_2\|342113:53258..56956 -
CDS_10223	CDS	CDS_10223:56761..56845 -
CDS_10223	CDS	CDS_10223:56295..56557 -
CDS_10223	CDS	CDS_10223:55732..55830 -
CDS_10223	CDS	CDS_10223:55272..55481 -
CDS_10223	CDS	CDS_10223:55014..55111 -
CDS_10223	CDS	CDS_10223:54531..54835 -
CDS_10223	CDS	CDS_10223:54288..54340 -
CDS_10223	CDS	CDS_10223:54025..54102 -
jgi.p\|Nanoce1779_2\|342474	gene	jgi.p\|Nanoce1779_2\|342474:82997..83889 +
jgi.p\|Nanoce1779_2\|342474	mRNA	jgi.p\|Nanoce1779_2\|342474:82997..83889 +
CDS_10234	CDS	CDS_10234:83334..83789 +
jgi.p\|Nanoce1779_2\|342551	gene	jgi.p\|Nanoce1779_2\|342551:80239..81815 +
jgi.p\|Nanoce1779_2\|342551	mRNA	jgi.p\|Nanoce1779_2\|342551:80239..81815 +
CDS_10233	CDS	CDS_10233:80347..80740 +
CDS_10233	CDS	CDS_10233:80974..81098 +
CDS_10233	CDS	CDS_10233:81224..81679 +
jgi.p\|Nanoce1779_2\|342752	gene	jgi.p\|Nanoce1779_2\|342752:105374..106680 -
jgi.p\|Nanoce1779_2\|342752	mRNA	jgi.p\|Nanoce1779_2\|342752:105374..106680 -
CDS_10241	CDS	CDS_10241:106507..106509 -
CDS_10241	CDS	CDS_10241:106150..106324 -
CDS_10241	CDS	CDS_10241:105579..105931 -
jgi.p\|Nanoce1779_2\|343096	gene	jgi.p\|Nanoce1779_2\|343096:114625..115781 +
jgi.p\|Nanoce1779_2\|343096	mRNA	jgi.p\|Nanoce1779_2\|343096:114625..115781 +
CDS_10244	CDS	CDS_10244:114787..115475 +
CDS_10244	CDS	CDS_10244:115595..115649 +
jgi.p\|Nanoce1779_2\|343135	gene	jgi.p\|Nanoce1779_2\|343135:122883..127466 +
jgi.p\|Nanoce1779_2\|343135	mRNA	jgi.p\|Nanoce1779_2\|343135:122883..127466 +
CDS_10248	CDS	CDS_10248:123243..123324 +
CDS_10248	CDS	CDS_10248:123505..123673 +
CDS_10248	CDS	CDS_10248:123810..123894 +
CDS_10248	CDS	CDS_10248:123992..124069 +
CDS_10248	CDS	CDS_10248:124218..124377 +
CDS_10248	CDS	CDS_10248:124569..124618 +
CDS_10248	CDS	CDS_10248:124736..124828 +
CDS_10248	CDS	CDS_10248:124957..125153 +
CDS_10248	CDS	CDS_10248:125527..125698 +
CDS_10248	CDS	CDS_10248:125822..125942 +
CDS_10248	CDS	CDS_10248:126164..126365 +
CDS_10248	CDS	CDS_10248:126608..126769 +
CDS_10248	CDS	CDS_10248:126892..127000 +
CDS_10248	CDS	CDS_10248:127161..127238 +
jgi.p\|Nanoce1779_2\|569709	gene	jgi.p\|Nanoce1779_2\|569709:78122..78506 +
jgi.p\|Nanoce1779_2\|569709	mRNA	jgi.p\|Nanoce1779_2\|569709:78122..78506 +
CDS_10232	CDS	CDS_10232:78122..78312 +
CDS_10232	CDS	CDS_10232:78356..78506 +
jgi.p\|Nanoce1779_2\|569710	gene	jgi.p\|Nanoce1779_2\|569710:84111..85473 +
jgi.p\|Nanoce1779_2\|569710	mRNA	jgi.p\|Nanoce1779_2\|569710:84111..85473 +
CDS_10235	CDS	CDS_10235:84111..84130 +
CDS_10235	CDS	CDS_10235:84340..84474 +
CDS_10235	CDS	CDS_10235:84639..84728 +
CDS_10235	CDS	CDS_10235:84869..85078 +
CDS_10235	CDS	CDS_10235:85227..85473 +
jgi.p\|Nanoce1779_2\|610418	gene	jgi.p\|Nanoce1779_2\|610418:3086..4500 -
jgi.p\|Nanoce1779_2\|610418	mRNA	jgi.p\|Nanoce1779_2\|610418:3086..4500 -
CDS_10206	CDS	CDS_10206:3516..3665 -
CDS_10206	CDS	CDS_10206:3094..3402 -
jgi.p\|Nanoce1779_2\|610444	gene	jgi.p\|Nanoce1779_2\|610444:33635..34738 +
jgi.p\|Nanoce1779_2\|610444	mRNA	jgi.p\|Nanoce1779_2\|610444:33635..34738 +
CDS_10215	CDS	CDS_10215:33823..33863 +
CDS_10215	CDS	CDS_10215:34120..34300 +
jgi.p\|Nanoce1779_2\|610445	gene	jgi.p\|Nanoce1779_2\|610445:34726..36019 +
jgi.p\|Nanoce1779_2\|610445	mRNA	jgi.p\|Nanoce1779_2\|610445:34726..36019 +
CDS_10216	CDS	CDS_10216:34750..34820 +
CDS_10216	CDS	CDS_10216:35134..35596 +
jgi.p\|Nanoce1779_2\|610447	gene	jgi.p\|Nanoce1779_2\|610447:36020..38337 +
jgi.p\|Nanoce1779_2\|610447	mRNA	jgi.p\|Nanoce1779_2\|610447:36020..38337 +
CDS_10217	CDS	CDS_10217:36052..38052 +
jgi.p\|Nanoce1779_2\|610451	gene	jgi.p\|Nanoce1779_2\|610451:38332..39873 -
jgi.p\|Nanoce1779_2\|610451	mRNA	jgi.p\|Nanoce1779_2\|610451:38332..39873 -
CDS_10218	CDS	CDS_10218:38675..39292 -
CDS_10218	CDS	CDS_10218:38467..38538 -
jgi.p\|Nanoce1779_2\|610462	gene	jgi.p\|Nanoce1779_2\|610462:44898..45348 -
jgi.p\|Nanoce1779_2\|610462	mRNA	jgi.p\|Nanoce1779_2\|610462:44898..45348 -
CDS_10220	CDS	CDS_10220:44901..45335 -
jgi.p\|Nanoce1779_2\|610486	gene	jgi.p\|Nanoce1779_2\|610486:59283..60328 +
jgi.p\|Nanoce1779_2\|610486	mRNA	jgi.p\|Nanoce1779_2\|610486:59283..60328 +
CDS_10224	CDS	CDS_10224:59289..59393 +
CDS_10224	CDS	CDS_10224:59632..59727 +
CDS_10224	CDS	CDS_10224:60107..60187 +
jgi.p\|Nanoce1779_2\|610492	gene	jgi.p\|Nanoce1779_2\|610492:64010..68391 +
jgi.p\|Nanoce1779_2\|610492	mRNA	jgi.p\|Nanoce1779_2\|610492:64010..68391 +
CDS_10226	CDS	CDS_10226:64714..64760 +
CDS_10226	CDS	CDS_10226:64932..65055 +
CDS_10226	CDS	CDS_10226:65473..65657 +
CDS_10226	CDS	CDS_10226:65841..65902 +
CDS_10226	CDS	CDS_10226:66066..66163 +
CDS_10226	CDS	CDS_10226:66367..66510 +
CDS_10226	CDS	CDS_10226:66740..66886 +
CDS_10226	CDS	CDS_10226:67108..67224 +
CDS_10226	CDS	CDS_10226:67558..67669 +
CDS_10226	CDS	CDS_10226:67806..67906 +
jgi.p\|Nanoce1779_2\|610497	gene	jgi.p\|Nanoce1779_2\|610497:70684..71220 -
jgi.p\|Nanoce1779_2\|610497	mRNA	jgi.p\|Nanoce1779_2\|610497:70684..71220 -
CDS_10228	CDS	CDS_10228:70929..71129 -
jgi.p\|Nanoce1779_2\|610501	gene	jgi.p\|Nanoce1779_2\|610501:75515..75814 -
jgi.p\|Nanoce1779_2\|610501	mRNA	jgi.p\|Nanoce1779_2\|610501:75515..75814 -
CDS_10230	CDS	CDS_10230:75536..75796 -
jgi.p\|Nanoce1779_2\|610505	gene	jgi.p\|Nanoce1779_2\|610505:76776..77532 -
jgi.p\|Nanoce1779_2\|610505	mRNA	jgi.p\|Nanoce1779_2\|610505:76776..77532 -
CDS_10231	CDS	CDS_10231:77129..77495 -
CDS_10231	CDS	CDS_10231:76842..76903 -
jgi.p\|Nanoce1779_2\|610518	gene	jgi.p\|Nanoce1779_2\|610518:85612..86757 -
jgi.p\|Nanoce1779_2\|610518	mRNA	jgi.p\|Nanoce1779_2\|610518:85612..86757 -
CDS_10236	CDS	CDS_10236:85756..86178 -
jgi.p\|Nanoce1779_2\|610537	gene	jgi.p\|Nanoce1779_2\|610537:103814..105246 +
jgi.p\|Nanoce1779_2\|610537	mRNA	jgi.p\|Nanoce1779_2\|610537:103814..105246 +
CDS_10240	CDS	CDS_10240:104059..105168 +
jgi.p\|Nanoce1779_2\|610542	gene	jgi.p\|Nanoce1779_2\|610542:112157..113802 +
jgi.p\|Nanoce1779_2\|610542	mRNA	jgi.p\|Nanoce1779_2\|610542:112157..113802 +
CDS_10243	CDS	CDS_10243:112211..112318 +
CDS_10243	CDS	CDS_10243:112443..112544 +
CDS_10243	CDS	CDS_10243:112674..112819 +
CDS_10243	CDS	CDS_10243:112958..113022 +
CDS_10243	CDS	CDS_10243:113229..113308 +
CDS_10243	CDS	CDS_10243:113550..113696 +
jgi.p\|Nanoce1779_2\|610548	gene	jgi.p\|Nanoce1779_2\|610548:116905..119284 -
jgi.p\|Nanoce1779_2\|610548	mRNA	jgi.p\|Nanoce1779_2\|610548:116905..119284 -
CDS_10245	CDS	CDS_10245:118958..119109 -
CDS_10245	CDS	CDS_10245:118387..118521 -
CDS_10245	CDS	CDS_10245:118196..118256 -
CDS_10245	CDS	CDS_10245:117866..118041 -
CDS_10245	CDS	CDS_10245:117467..117659 -
CDS_10245	CDS	CDS_10245:117023..117298 -
jgi.p\|Nanoce1779_2\|610552	gene	jgi.p\|Nanoce1779_2\|610552:119399..120106 +
jgi.p\|Nanoce1779_2\|610552	mRNA	jgi.p\|Nanoce1779_2\|610552:119399..120106 +
CDS_10246	CDS	CDS_10246:119423..119735 +
CDS_10246	CDS	CDS_10246:119845..119894 +
jgi.p\|Nanoce1779_2\|624180	gene	jgi.p\|Nanoce1779_2\|624180:94833..97851 -
jgi.p\|Nanoce1779_2\|624180	mRNA	jgi.p\|Nanoce1779_2\|624180:94833..97851 -
CDS_10238	CDS	CDS_10238:97785..97851 -
CDS_10238	CDS	CDS_10238:95993..96169 -
CDS_10238	CDS	CDS_10238:95775..95845 -
CDS_10238	CDS	CDS_10238:95258..95558 -
CDS_10238	CDS	CDS_10238:94833..94852 -
jgi.p\|Nanoce1779_2\|633973	gene	jgi.p\|Nanoce1779_2\|633973:22902..23630 -
jgi.p\|Nanoce1779_2\|633973	mRNA	jgi.p\|Nanoce1779_2\|633973:22902..23630 -
CDS_10211	CDS	CDS_10211:23423..23434 -
CDS_10211	CDS	CDS_10211:22902..23249 -
jgi.p\|Nanoce1779_2\|633974	gene	jgi.p\|Nanoce1779_2\|633974:23970..24536 -
jgi.p\|Nanoce1779_2\|633974	mRNA	jgi.p\|Nanoce1779_2\|633974:23970..24536 -
CDS_10212	CDS	CDS_10212:24370..24481 -
CDS_10212	CDS	CDS_10212:23970..24253 -
jgi.p\|Nanoce1779_2\|633981	gene	jgi.p\|Nanoce1779_2\|633981:46501..53599 +
jgi.p\|Nanoce1779_2\|633981	mRNA	jgi.p\|Nanoce1779_2\|633981:46501..53599 +
CDS_10221	CDS	CDS_10221:46773..47006 +
CDS_10221	CDS	CDS_10221:47290..47375 +
CDS_10221	CDS	CDS_10221:47508..47673 +
CDS_10221	CDS	CDS_10221:47871..47978 +
CDS_10221	CDS	CDS_10221:48148..48216 +
CDS_10221	CDS	CDS_10221:48409..48510 +
CDS_10221	CDS	CDS_10221:48715..48919 +
CDS_10221	CDS	CDS_10221:49287..49540 +
jgi.p\|Nanoce1779_2\|633988	gene	jgi.p\|Nanoce1779_2\|633988:100629..103450 +
jgi.p\|Nanoce1779_2\|633988	mRNA	jgi.p\|Nanoce1779_2\|633988:100629..103450 +
CDS_10239	CDS	CDS_10239:100629..100680 +
CDS_10239	CDS	CDS_10239:100894..101103 +
CDS_10239	CDS	CDS_10239:101208..101291 +
CDS_10239	CDS	CDS_10239:101547..101662 +
CDS_10239	CDS	CDS_10239:102915..103298 +
jgi.p\|Nanoce1779_2\|643172	gene	jgi.p\|Nanoce1779_2\|643172:60835..64371 -
jgi.p\|Nanoce1779_2\|643172	mRNA	jgi.p\|Nanoce1779_2\|643172:60835..64371 -
CDS_10225	CDS	CDS_10225:64195..64371 -
CDS_10225	CDS	CDS_10225:63141..63209 -
CDS_10225	CDS	CDS_10225:62787..62987 -
CDS_10225	CDS	CDS_10225:62237..62438 -
CDS_10225	CDS	CDS_10225:61910..61971 -
CDS_10225	CDS	CDS_10225:61635..61696 -
CDS_10225	CDS	CDS_10225:61335..61497 -
CDS_10225	CDS	CDS_10225:60835..60930 -
jgi.p\|Nanoce1779_2\|674655	gene	jgi.p\|Nanoce1779_2\|674655:684..2132 -
jgi.p\|Nanoce1779_2\|674655	mRNA	jgi.p\|Nanoce1779_2\|674655:684..2132 -
CDS_10205	CDS	CDS_10205:1755..2118 -
CDS_10205	CDS	CDS_10205:1491..1529 -
CDS_10205	CDS	CDS_10205:1256..1302 -
CDS_10205	CDS	CDS_10205:795..1043 -
jgi.p\|Nanoce1779_2\|674658	gene	jgi.p\|Nanoce1779_2\|674658:6913..13449 -
jgi.p\|Nanoce1779_2\|674658	mRNA	jgi.p\|Nanoce1779_2\|674658:6913..13449 -
CDS_10207	CDS	CDS_10207:12411..12724 -
CDS_10207	CDS	CDS_10207:12065..12262 -
CDS_10207	CDS	CDS_10207:11768..11818 -
CDS_10207	CDS	CDS_10207:11520..11584 -
CDS_10207	CDS	CDS_10207:11158..11258 -
CDS_10207	CDS	CDS_10207:10858..10924 -
CDS_10207	CDS	CDS_10207:10588..10707 -
CDS_10207	CDS	CDS_10207:10228..10384 -
CDS_10207	CDS	CDS_10207:9908..10001 -
CDS_10207	CDS	CDS_10207:9071..9159 -
CDS_10207	CDS	CDS_10207:8902..8968 -
CDS_10207	CDS	CDS_10207:8644..8712 -
CDS_10207	CDS	CDS_10207:8279..8340 -
CDS_10207	CDS	CDS_10207:7805..8017 -
CDS_10207	CDS	CDS_10207:7601..7679 -
CDS_10207	CDS	CDS_10207:7280..7407 -
CDS_10207	CDS	CDS_10207:6913..7099 -
jgi.p\|Nanoce1779_2\|674661	gene	jgi.p\|Nanoce1779_2\|674661:21348..22607 +
jgi.p\|Nanoce1779_2\|674661	mRNA	jgi.p\|Nanoce1779_2\|674661:21348..22607 +
CDS_10210	CDS	CDS_10210:21672..21764 +
CDS_10210	CDS	CDS_10210:22044..22261 +
CDS_10210	CDS	CDS_10210:22400..22541 +
jgi.p\|Nanoce1779_2\|674666	gene	jgi.p\|Nanoce1779_2\|674666:40069..42193 +
jgi.p\|Nanoce1779_2\|674666	mRNA	jgi.p\|Nanoce1779_2\|674666:40069..42193 +
CDS_10219	CDS	CDS_10219:40154..40190 +
CDS_10219	CDS	CDS_10219:40288..40420 +
CDS_10219	CDS	CDS_10219:41264..41323 +
CDS_10219	CDS	CDS_10219:41956..42037 +
jgi.p\|Nanoce1779_2\|674674	gene	jgi.p\|Nanoce1779_2\|674674:73128..75533 -
jgi.p\|Nanoce1779_2\|674674	mRNA	jgi.p\|Nanoce1779_2\|674674:73128..75533 -
CDS_10229	CDS	CDS_10229:75283..75381 -
CDS_10229	CDS	CDS_10229:75111..75210 -
CDS_10229	CDS	CDS_10229:74802..74938 -
CDS_10229	CDS	CDS_10229:74497..74574 -
CDS_10229	CDS	CDS_10229:74172..74286 -
CDS_10229	CDS	CDS_10229:73865..73947 -
CDS_10229	CDS	CDS_10229:73566..73613 -
CDS_10229	CDS	CDS_10229:73130..73321 -
jgi.p\|Nanoce1779_2\|674676	gene	jgi.p\|Nanoce1779_2\|674676:86932..89641 -
jgi.p\|Nanoce1779_2\|674676	mRNA	jgi.p\|Nanoce1779_2\|674676:86932..89641 -
CDS_10237	CDS	CDS_10237:86982..88754 -
jgi.p\|Nanoce1779_2\|674681	gene	jgi.p\|Nanoce1779_2\|674681:110944..112006 +
jgi.p\|Nanoce1779_2\|674681	mRNA	jgi.p\|Nanoce1779_2\|674681:110944..112006 +
CDS_10242	CDS	CDS_10242:110944..111058 +
CDS_10242	CDS	CDS_10242:111256..111461 +
CDS_10242	CDS	CDS_10242:111564..111692 +
CDS_10242	CDS	CDS_10242:111824..112006 +
jgi.p\|Nanoce1779_2\|341440	polypeptide	jgi.p\|Nanoce1779_2\|341440:16927..18009 -
jgi.p\|Nanoce1779_2\|341564	polypeptide	jgi.p\|Nanoce1779_2\|341564:29053..32534 +
jgi.p\|Nanoce1779_2\|341914	polypeptide	jgi.p\|Nanoce1779_2\|341914:50867..53203 +
jgi.p\|Nanoce1779_2\|342053	polypeptide	jgi.p\|Nanoce1779_2\|342053:68176..70808 -
jgi.p\|Nanoce1779_2\|342113	polypeptide	jgi.p\|Nanoce1779_2\|342113:54025..56845 -
jgi.p\|Nanoce1779_2\|342474	polypeptide	jgi.p\|Nanoce1779_2\|342474:83334..83789 +
jgi.p\|Nanoce1779_2\|342551	polypeptide	jgi.p\|Nanoce1779_2\|342551:80347..81679 +
jgi.p\|Nanoce1779_2\|342752	polypeptide	jgi.p\|Nanoce1779_2\|342752:105579..106509 -
jgi.p\|Nanoce1779_2\|343096	polypeptide	jgi.p\|Nanoce1779_2\|343096:114787..115649 +
jgi.p\|Nanoce1779_2\|343135	polypeptide	jgi.p\|Nanoce1779_2\|343135:123243..127238 +
jgi.p\|Nanoce1779_2\|569709	polypeptide	jgi.p\|Nanoce1779_2\|569709:78122..78506 +
jgi.p\|Nanoce1779_2\|569710	polypeptide	jgi.p\|Nanoce1779_2\|569710:84111..85473 +
jgi.p\|Nanoce1779_2\|610418	polypeptide	jgi.p\|Nanoce1779_2\|610418:3094..3665 -
jgi.p\|Nanoce1779_2\|610444	polypeptide	jgi.p\|Nanoce1779_2\|610444:33823..34300 +
jgi.p\|Nanoce1779_2\|610445	polypeptide	jgi.p\|Nanoce1779_2\|610445:34750..35596 +
jgi.p\|Nanoce1779_2\|610447	polypeptide	jgi.p\|Nanoce1779_2\|610447:36052..38052 +
jgi.p\|Nanoce1779_2\|610451	polypeptide	jgi.p\|Nanoce1779_2\|610451:38467..39292 -
jgi.p\|Nanoce1779_2\|610462	polypeptide	jgi.p\|Nanoce1779_2\|610462:44901..45335 -
jgi.p\|Nanoce1779_2\|610486	polypeptide	jgi.p\|Nanoce1779_2\|610486:59289..60187 +
jgi.p\|Nanoce1779_2\|610492	polypeptide	jgi.p\|Nanoce1779_2\|610492:64714..67906 +
jgi.p\|Nanoce1779_2\|610497	polypeptide	jgi.p\|Nanoce1779_2\|610497:70929..71129 -
jgi.p\|Nanoce1779_2\|610501	polypeptide	jgi.p\|Nanoce1779_2\|610501:75536..75796 -
jgi.p\|Nanoce1779_2\|610505	polypeptide	jgi.p\|Nanoce1779_2\|610505:76842..77495 -
jgi.p\|Nanoce1779_2\|610518	polypeptide	jgi.p\|Nanoce1779_2\|610518:85756..86178 -
jgi.p\|Nanoce1779_2\|610537	polypeptide	jgi.p\|Nanoce1779_2\|610537:104059..105168 +
jgi.p\|Nanoce1779_2\|610542	polypeptide	jgi.p\|Nanoce1779_2\|610542:112211..113696 +
jgi.p\|Nanoce1779_2\|610548	polypeptide	jgi.p\|Nanoce1779_2\|610548:117023..119109 -
jgi.p\|Nanoce1779_2\|610552	polypeptide	jgi.p\|Nanoce1779_2\|610552:119423..119894 +
jgi.p\|Nanoce1779_2\|624180	polypeptide	jgi.p\|Nanoce1779_2\|624180:94833..97851 -
jgi.p\|Nanoce1779_2\|633973	polypeptide	jgi.p\|Nanoce1779_2\|633973:22902..23434 -
jgi.p\|Nanoce1779_2\|633974	polypeptide	jgi.p\|Nanoce1779_2\|633974:23970..24481 -
jgi.p\|Nanoce1779_2\|633981	polypeptide	jgi.p\|Nanoce1779_2\|633981:46773..49540 +
jgi.p\|Nanoce1779_2\|633988	polypeptide	jgi.p\|Nanoce1779_2\|633988:100629..103298 +
jgi.p\|Nanoce1779_2\|643172	polypeptide	jgi.p\|Nanoce1779_2\|643172:60835..64371 -
jgi.p\|Nanoce1779_2\|674655	polypeptide	jgi.p\|Nanoce1779_2\|674655:795..2118 -
jgi.p\|Nanoce1779_2\|674658	polypeptide	jgi.p\|Nanoce1779_2\|674658:6913..12724 -
jgi.p\|Nanoce1779_2\|674661	polypeptide	jgi.p\|Nanoce1779_2\|674661:21672..22541 +
jgi.p\|Nanoce1779_2\|674666	polypeptide	jgi.p\|Nanoce1779_2\|674666:40154..42037 +
jgi.p\|Nanoce1779_2\|674674	polypeptide	jgi.p\|Nanoce1779_2\|674674:73130..75381 -
jgi.p\|Nanoce1779_2\|674676	polypeptide	jgi.p\|Nanoce1779_2\|674676:86982..88754 -
jgi.p\|Nanoce1779_2\|674681	polypeptide	jgi.p\|Nanoce1779_2\|674681:110944..112006 +
ncniL073	syntenic_region	ncniL073:685..127466 +

Analyses

This supercontig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gennome assembly for N. oceanica CCMP1779	2018-02-01

Annotated Terms

Homology

Relationships

Sequences

Synonyms

Publications