jgi.p|Nanoce1779_2|343135, gene_10248 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|343135
Unique Namegene_10248
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_50:122883..127466 +

Link to JBrowse

Properties
Property NameValue
TranscriptId343221
ProteinId343135
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_50supercontigscaffold_50:122883..127466 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL073ncniL073Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO30G01290NO30G01290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|343135mRNA_10248-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|343135mRNA_10248Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|343135

>mRNA_10248-protein ID=mRNA_10248-protein|Name=jgi.p|Nanoce1779_2|343135|organism=Nannochloropsis oceanica|type=polypeptide|length=586bp
MGVKGLLAFLQRRIQWDDERRASVGEYEYGWEPLAGKSLLVDGNAVIMWL
AERAFEGKAGRKKGGRKGDGNGKRCALWMGGYEWYYSEATAFLRAFQMQD
VKLTFIFDNRLGTLLEEGREEGGEGDVKEGADLDRLLRRRDNVVGVQEKL
LGHPRAGGSVFLHSLPRPLLLSAQFKRALRDVGGMETVKIYGEADSVLAW
GVAAPDSEYYAVLSGDSDFLVYSNCRLIPLETLRLDVMKARVLTPAEVAR
LLSLPPERQGRRDTSTAPSFHPSLLPAFAMVVGNDHTLQHPLRPLLLRHL
GLFDSPHITDILPLFLSSAPPPYSSLPPSPSPSPSPAAKTLDIIESFLRR
HPAFARVWRQTMASYNREDKILPSSLPPSASSSFRATVAKSQEQARGVLE
EKGLPPYLIDAVLTGRISSSLARLIAAPPPSVLPLDDGGGGEGGGGGGGG
GPAAAAATGGGKGASKRTERHRPPQKAPLSLRLRFRLLLLAAAAAAAAGG
PQGTRVASPSPLRTPPQSIPGRERPTPPKPHPDSTPPSAPLRPSWRYRKR
LGSRFARRRPRGSRGHPPLPPSRTPSPLSRNNQEL*
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Synonyms
Publications