jgi.p|Nanoce1779_2|633981, gene_10221 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|633981
Unique Namegene_10221
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_50:46501..53599 +

Link to JBrowse

Properties
Property NameValue
TranscriptId634067
ProteinId633981
Product nameWD40-repeat-containing domain protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_50supercontigscaffold_50:46501..53599 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL073ncniL073Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO30G01070NO30G01070Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633981mRNA_10221-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633981mRNA_10221Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|633981

>mRNA_10221-protein ID=mRNA_10221-protein|Name=jgi.p|Nanoce1779_2|633981|organism=Nannochloropsis oceanica|type=polypeptide|length=408bp
MPMKDSTHTVCSSPSSPARPLPNRQLPAAAFWLLPAFIISTSTSQQGGGE
NMASAWELKGRLEKAVHGEVGGGGHRRKVTCLKFNRSGSLLATGAADGSL
RIYATVSTPQGLTALSSSTASTLDLRGHEKGLSSLGWNPASDTQLATCGY
DRTVRLWDARHKGHETHKVTTAGSHAVNVNLAWSPNGQNLAVSNVHDQIS
FFDVRRFSSAEGCKRMSYKYEVHDFSWSPAGNHWVVCGAMRNGTGWLEVY
TYPRQDSVFTTEAHTSTCLALSLDPTHQHLALGSADGLVSIWGLEELLPL
RTMDRFNTAVSSLDFSYDGRWLAVGSEDSSSIDVTEVASGKQLALLKTEG
GVNALAWHPKACLLAWSHEMGGGGGGGTGVGSLGGSSGSGGGRKEEGVRF
VSVSDRV*
back to top
Synonyms
Publications