NO30G01070, NO30G01070 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G01070 vs. NCBI_GenBank
Match: XP_021879677.1 (WD40-repeat-containing domain protein [Lobosporangium transversale] >ORZ11362.1 WD40-repeat-containing domain protein [Lobosporangium transversale]) HSP 1 Score: 205.3 bits (521), Expect = 3.600e-49 Identity = 106/293 (36.18%), Postives = 171/293 (58.36%), Query Frame = 0 Query: 73 HRRKVTCLKFNRSGSLLATGAADGSLRIYATVSTPQGLTALSSSTASTLDLRGHEKGLSSLGWNPASDTQLATCGYDRTVRLWDARHKGHETHKVTTAGSHAVNVNLAWSPNGQNLAVSNVHDQISFFDVRRFSSAEGCKRMSYKYEVHDFSWSPAGNHWVVCGAMRNGTGWLEVYTYPRQDSVFTTEAHTSTCLALSLDPTHQHLALGSADGLVSIWGLEELLPLRTMDRFNTAVSSLDFSYDGRWLAVGSEDSSSIDVTEVASGKQLALLKTEGGVNALAWHPKACLLAWS 366 H+ V + +N G LA+G+ D + R++A T + S+ +LRGH + L W+P LAT D+TVR+WDAR HK+ T G N+N++WSP+GQ++AV N D ISF D R F K + ++ EV++ SW+PAG+ ++ + G G ++V++YP + V+ EAHT+ C L DP ++LA GSAD LV++W LE+ + +RT + + + ++ FS+DG ++A SED +ID++ V +G+ + + +N +AWHP LLA++ Sbjct: 27 HKANVHTVGWNCDGRKLASGSVDKTARVWAPERT--------ADPRSSQELRGHTDSVDQLRWDPTHPDHLATASCDKTVRIWDAR-SAKSIHKIDTTGQ---NINISWSPDGQSIAVGNKEDLISFIDTRTFKVQ---KEVPFRVEVNEISWNPAGDLFL----LTTGQGSIKVFSYPAMEEVYALEAHTANCYCLEFDPRGRYLATGSADALVNLWDLEDYICVRTFGQLHWPIRTISFSFDGEFIASASED-FAIDISHVETGESVHTVTCFAAMNTVAWHPSKYLLAYA 299
BLAST of NO30G01070 vs. NCBI_GenBank
Match: KFH70471.1 (hypothetical protein MVEG_03321 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 200.7 bits (509), Expect = 8.800e-48 Identity = 109/293 (37.20%), Postives = 165/293 (56.31%), Query Frame = 0 Query: 73 HRRKVTCLKFNRSGSLLATGAADGSLRIYATVSTPQGLTALSSSTASTLDLRGHEKGLSSLGWNPASDTQLATCGYDRTVRLWDARHKGHETHKVTTAGSHAVNVNLAWSPNGQNLAVSNVHDQISFFDVRRFSSAEGCKRMSYKYEVHDFSWSPAGNHWVVCGAMRNGTGWLEVYTYPRQDSVFTTEAHTSTCLALSLDPTHQHLALGSADGLVSIWGLEELLPLRTMDRFNTAVSSLDFSYDGRWLAVGSEDSSSIDVTEVASGKQLALLKTEGGVNALAWHPKACLLAWS 366 H+ V + +N G LA+G+ D + RI+ TP+ +S + +LRGH + L W+P LAT DRTVR+WDAR G H + T G N+N++WSP+GQN+AV N D IS D R F A K+ ++ EV++ W+P GN + + G G ++V YP + + T EAHTS C L DP ++LA GSAD LV++W +EE +R+ + + ++ FS+DG++L SED SID++ V +G+ + + +N +AWHP LLA++ Sbjct: 27 HKASVHTVGWNSDGRRLASGSVDKTARIW----TPE----RTSDPRHSQELRGHTDSVDQLRWDPTHPDHLATASCDRTVRIWDAR-SGKSIHTIDTGGQ---NINISWSPDGQNIAVGNKEDVISIIDTRTFQIA---KKTQFRVEVNEIGWNPQGNLFF----LTTGQGHIKVLEYPSMNEIHTMEAHTSNCYCLEFDPRGRYLATGSADALVNLWDMEEFHNVRSFGVLDWPIRTISFSFDGQFLVSASED-LSIDISLVETGESVHKIDCFAAMNTVAWHPSKYLLAYA 299
BLAST of NO30G01070 vs. NCBI_GenBank
Match: ORX51467.1 (WD40 repeat-like protein [Piromyces finnis]) HSP 1 Score: 197.6 bits (501), Expect = 7.500e-47 Identity = 111/309 (35.92%), Postives = 174/309 (56.31%), Query Frame = 0 Query: 57 KGRLEKAVHGEVGGGGHRRKVTCLKFNRSGSLLATGAADGSLRIYATVSTPQGLTALSSSTASTLDLRGHEKGLSSLGWNPASDTQLATCGYDRTVRLWDARHKGHETHKVTTAGSHAVNVNLAWSPNGQNLAVSNVHDQISFFDVRRFSSAEGCKRMSYKYEVHDFSWSPAGNHWVVCGAMRNGTGWLEVYTYPRQDSVFTTEAHTSTCLALSLDPTHQHLALGSADGLVSIWGLEELLPLRTMDRFNTAVSSLDFSYDGRWLAVGSEDSSSIDVTEVASGKQLALLKTEGGVNALAWHPKACLLAWS 366 K R +++V E GHR+KV + +NR G LA+G+ D + R++ SSS ++L+GH + L W+P LAT DRTVR+WD+R ++T+G N+N+ WSP+G+ +AV N D ISF D+R + + + EV++ SW+ G+ + + +G G +EV YP + + +AHT+ C L DP ++LA GSAD LVS+W +E+L +RT N V ++ FSYDG +LA SED ID++ V +G+Q+ ++ +N++AWHP LLA++ Sbjct: 19 KQRFKQSVSREY--KGHRQKVHTVGWNRDGKKLASGSVDHTARVWN--------IERSSSHRDCIELKGHSGSVDQLCWDPTHSEYLATASADRTVRIWDSR-AAKCIQSISTSGE---NINICWSPDGKQIAVGNKEDTISFIDIRTYKIINTKRN---EIEVNEISWNFGGDKFF----LTSGLGTIEVLDYPSLKEIKSIQAHTANCYCLEFDPKGRYLATGSADTLVSLWDIEDLTCIRTFGNLNWPVRTISFSYDGEYLASASED-LFIDISNVETGEQVHKIECNAAMNSMAWHPSKYLLAYA 305
BLAST of NO30G01070 vs. NCBI_GenBank
Match: XP_004349281.2 (transducin family protein/WD-40 repeat family protein [Capsaspora owczarzaki ATCC 30864] >KJE91395.1 transducin family protein/WD-40 repeat family protein [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 196.4 bits (498), Expect = 1.700e-46 Identity = 106/295 (35.93%), Postives = 166/295 (56.27%), Query Frame = 0 Query: 73 HRRKVTCLKFNRSGSLLATGAADGSLRIYATVSTPQGLTALSSSTASTLDLRGHEKGLSSLGWNPASDTQLATCGYDRTVRLWDARHKGHETHKVTTAGSHAVNVNLAWSPNGQNLAVSNVHDQISFFDVRRFSSAEGCKRMSYKYEVHDFSWSPAGNHWVVCGAMRNGTGWLEVYTYPRQDSVFTTEAHTSTCLALSLDPTHQHLALGSADGLVSIWGLEELLPLRTMDRFNTAVSSLDFSYDGRWLAVGSEDSSSIDVTEVASGKQLALLKTEGGVNALAWHPKACLLAWSHE 368 H K+T + +N G L T + D SLRI+ + L+L+GH +G+ L W+P S + ++TC +DRTVR+WD R G + + T G N+ LAWSP+GQ +AV N D ISF DVR+ A+ KR+ + E ++ +W+ G+ + + G G +++Y +P + T +AHT C+ + DP + A GSAD LVSIW EL+ LRT+ +F+ + ++ FS+D +++A SED ID++ V + + + + VN LAWHPK +LA+ E Sbjct: 20 HTNKITAVGWNTEGRYLGTASLDKSLRIW-------------HFSRQDLELKGHTEGIDKLCWSPTSASTISTCSHDRTVRIWDVR-AGKVANVIQTEG--GANIGLAWSPDGQTIAVGNRDDIISFIDVRQ---AKVLKRLDPEVEANEMAWNAEGDIFYI----STGLGAVQMYQFPSMTRINTVQAHTGNCVCIRFDPKGRFFATGSADSLVSIWDAYELICLRTVQQFDLPIRAIGFSHDSQFIASASED-KFIDISAVDNAESVYQIPVASLVNTLAWHPKEHILAYGGE 290
BLAST of NO30G01070 vs. NCBI_GenBank
Match: ORY22478.1 (WD40 repeat-like protein [Neocallimastix californiae]) HSP 1 Score: 195.7 bits (496), Expect = 2.800e-46 Identity = 108/296 (36.49%), Postives = 166/296 (56.08%), Query Frame = 0 Query: 72 GHRRKVTCLKFNRSGSLLATGAADGSLRIYATVSTPQGLTALSSSTASTLDLRGHEKGLSSLGWNPASDTQLATCGYDRTVRLWDARHKGHETHKVTTAGSHAVNVNLAWSPNGQNLAVSNVHDQISFFDVRRFSSAEGCKRMSYKYEVHDFSWSPAGNHWVVCGAMRNGTGWLEVYTYPRQDSVFTTEAHTSTCLALSLDPTHQHLALGSADGLVSIWGLEELLPLRTMDRFNTAVSSLDFSYDGRWLAVGSEDSSSIDVTEVASGKQLALLKTEGGVNALAWHPKACLLAWSHE 368 GHR KV + +N G LA+G+ D + R++ SSS +L+GH + L W+P LAT D TVR+WD+R G +H + T+G N+N+ WSP+G+ +AV N D ISF D R + S +EV++ SW+ AG+ + + +G G +EV +P + + +AHT+ C L DP ++LA GSAD LVS+W +E+L +RT N V ++ FSYDG ++A SED ID++ V +G+Q+ ++ +N+LAWHP LLA++ + Sbjct: 32 GHRDKVHTVGWNCEGKKLASGSVDQTARVWN--------IERSSSHRDCTELKGHSGSVDQLCWDPTHSEYLATASADSTVRIWDSR-AGKCSHVIQTSGE---NINICWSPDGKQIAVGNKEDLISFIDTRTYKIVNS---KSNLFEVNEISWNFAGDKFY----LTSGKGTIEVLDFPSLKEIKSVQAHTANCYCLEFDPKGRYLATGSADTLVSLWEIEDLTCIRTFGNLNWPVRTISFSYDGEYIASSSED-LFIDISNVETGEQVHKIECNAAMNSLAWHPSKYLLAYASD 307
BLAST of NO30G01070 vs. NCBI_GenBank
Match: XP_003748466.1 (PREDICTED: THO complex subunit 3 [Galendromus occidentalis]) HSP 1 Score: 194.9 bits (494), Expect = 4.900e-46 Identity = 105/295 (35.59%), Postives = 161/295 (54.58%), Query Frame = 0 Query: 71 GGHRRKVTCLKFNRSGSLLATGAADGSLRIYATVSTPQGLTALSSSTASTLDLRGHEKGLSSLGWNPASDTQLATCGYDRTVRLWDARHKGHETHKVTTAGSHAVNVNLAWSPNGQNLAVSNVHDQISFFDVRRFSSAEGCKRMSYKYEVHDFSWSPAGNHWVVCGAMRNGTGWLEVYTYPRQDSVFTTEAHTSTCLALSLDPTHQHLALGSADGLVSIWGLEELLPLRTMDRFNTAVSSLDFSYDGRWLAVGSEDSSSIDVTEVASGKQLALLKTEGGVNALAWHPKACLLAWS 366 G H KV C+ +N+ G LA+G+ D ++ I+ T + LRGH + L W+P LAT D+TV++WDAR + TH V T G N+N+ WSP+GQ +A+ N D +SF DV F K +K+EV++ SW G + + +G G + +Y+YP V +AH S C+ + DPT ++ A GS+D LVS+W + EL+ LRT +R + V +L FS+DG+ +A SED +D+ V +G + + + ++AWHPK LLA++ Sbjct: 27 GVHSLKVHCVSWNQDGRKLASGSLDKTVTIF---------TLDKDRLSKDTTLRGHSDSVDQLCWHPKQVEVLATASVDKTVKMWDAR-QPKATHSVATKGE---NINICWSPDGQTIAIGNKEDLVSFIDVASFKIR---KEQQFKFEVNEMSWDKTGQFFF----LTSGLGCIHIYSYPDMALVQVLQAHPSNCICVQFDPTGKYFATGSSDALVSLWDVNELICLRTFNRLDWPVRTLSFSHDGKLIASASED-LIVDIAHVETGDLIYQIPVKASTFSVAWHPKRYLLAFA 300
BLAST of NO30G01070 vs. NCBI_GenBank
Match: OAQ24881.1 (transducin family protein [Mortierella elongata AG-77]) HSP 1 Score: 193.0 bits (489), Expect = 1.800e-45 Identity = 103/293 (35.15%), Postives = 164/293 (55.97%), Query Frame = 0 Query: 73 HRRKVTCLKFNRSGSLLATGAADGSLRIYATVSTPQGLTALSSSTASTLDLRGHEKGLSSLGWNPASDTQLATCGYDRTVRLWDARHKGHETHKVTTAGSHAVNVNLAWSPNGQNLAVSNVHDQISFFDVRRFSSAEGCKRMSYKYEVHDFSWSPAGNHWVVCGAMRNGTGWLEVYTYPRQDSVFTTEAHTSTCLALSLDPTHQHLALGSADGLVSIWGLEELLPLRTMDRFNTAVSSLDFSYDGRWLAVGSEDSSSIDVTEVASGKQLALLKTEGGVNALAWHPKACLLAWS 366 H+ V + +N G LA+G+ D + R++A T S S+++LRGH + L W+P LAT D+TVR+WDAR G HKV T+G N+N++WSP+GQ +AV N D +SF D R F K EV++ SW+ AG+ ++ + G G +++ YP + + HT+ C L LDP ++LA GSAD LV++W + + +RT + + + ++ FS+DG ++A SED +ID++ V SG+ + ++ +N +AWHP LLA++ Sbjct: 27 HKSNVHTVGWNCDGRRLASGSVDKTARVWAPERT--------SDPRSSIELRGHTDSVDQLRWDPTHPDHLATASCDKTVRIWDAR-SGKSIHKVDTSGQ---NINISWSPDGQCIAVGNKEDMVSFIDTRTFKVEH---TYQSKVEVNEISWNHAGDLFL----LTTGQGTVKIMAYPSMKELRVLDGHTANCYCLELDPRGRYLATGSADALVNLWEMNDFSCVRTFGKLDWPIRTISFSFDGEFIASASED-LAIDISSVESGETVHKIECYAAMNTVAWHPSKYLLAYA 299
BLAST of NO30G01070 vs. NCBI_GenBank
Match: XP_022664790.1 (THO complex subunit 3-like isoform X1 [Varroa destructor]) HSP 1 Score: 192.2 bits (487), Expect = 3.100e-45 Identity = 104/293 (35.49%), Postives = 161/293 (54.95%), Query Frame = 0 Query: 73 HRRKVTCLKFNRSGSLLATGAADGSLRIYATVSTPQGLTALSSSTASTLDLRGHEKGLSSLGWNPASDTQLATCGYDRTVRLWDARHKGHETHKVTTAGSHAVNVNLAWSPNGQNLAVSNVHDQISFFDVRRFSSAEGCKRMSYKYEVHDFSWSPAGNHWVVCGAMRNGTGWLEVYTYPRQDSVFTTEAHTSTCLALSLDPTHQHLALGSADGLVSIWGLEELLPLRTMDRFNTAVSSLDFSYDGRWLAVGSEDSSSIDVTEVASGKQLALLKTEGGVNALAWHPKACLLAWS 366 H KV C+ +N+ G LA+G+ D S+ I+ A LRGH + + L W+P + LAT DR+V+LWDAR + H V T G N+N+ W P+GQ LAV N D +SF DV F + +K+EV++ SW +G + + +G G + V++YP S+ +AH S C+ + DP ++ A GS+D LVS+W + EL+ +RT +R + V +L FS+DG+ +A SED ID+ V +G+ + + + ++AWHPK LLA++ Sbjct: 40 HSLKVHCVTWNQDGRRLASGSLDKSVTIF---------NLEKDRLAKDTTLRGHSESVDQLCWHPRNPDVLATASIDRSVKLWDAR-QPKAVHTVATKGE---NINICWHPDGQTLAVGNKEDLVSFVDVSTFKIRQ---EQQFKFEVNEMSWDKSGYFFF----LTSGLGCIHVFSYPEMTSIQVLQAHPSNCICIEFDPRGRYFATGSSDALVSLWDVNELICIRTFNRLDWPVRTLSFSHDGKLIASASED-LVIDIAHVETGEMVHQIPVKASTFSVAWHPKRHLLAFA 311
BLAST of NO30G01070 vs. NCBI_GenBank
Match: XP_022664791.1 (THO complex subunit 3-like isoform X2 [Varroa destructor] >XP_022664792.1 THO complex subunit 3-like isoform X2 [Varroa destructor] >XP_022664793.1 THO complex subunit 3-like isoform X2 [Varroa destructor] >XP_022686048.1 THO complex subunit 3-like [Varroa jacobsoni] >XP_022686049.1 THO complex subunit 3-like [Varroa jacobsoni]) HSP 1 Score: 192.2 bits (487), Expect = 3.100e-45 Identity = 104/293 (35.49%), Postives = 161/293 (54.95%), Query Frame = 0 Query: 73 HRRKVTCLKFNRSGSLLATGAADGSLRIYATVSTPQGLTALSSSTASTLDLRGHEKGLSSLGWNPASDTQLATCGYDRTVRLWDARHKGHETHKVTTAGSHAVNVNLAWSPNGQNLAVSNVHDQISFFDVRRFSSAEGCKRMSYKYEVHDFSWSPAGNHWVVCGAMRNGTGWLEVYTYPRQDSVFTTEAHTSTCLALSLDPTHQHLALGSADGLVSIWGLEELLPLRTMDRFNTAVSSLDFSYDGRWLAVGSEDSSSIDVTEVASGKQLALLKTEGGVNALAWHPKACLLAWS 366 H KV C+ +N+ G LA+G+ D S+ I+ A LRGH + + L W+P + LAT DR+V+LWDAR + H V T G N+N+ W P+GQ LAV N D +SF DV F + +K+EV++ SW +G + + +G G + V++YP S+ +AH S C+ + DP ++ A GS+D LVS+W + EL+ +RT +R + V +L FS+DG+ +A SED ID+ V +G+ + + + ++AWHPK LLA++ Sbjct: 29 HSLKVHCVTWNQDGRRLASGSLDKSVTIF---------NLEKDRLAKDTTLRGHSESVDQLCWHPRNPDVLATASIDRSVKLWDAR-QPKAVHTVATKGE---NINICWHPDGQTLAVGNKEDLVSFVDVSTFKIRQ---EQQFKFEVNEMSWDKSGYFFF----LTSGLGCIHVFSYPEMTSIQVLQAHPSNCICIEFDPRGRYFATGSSDALVSLWDVNELICIRTFNRLDWPVRTLSFSHDGKLIASASED-LVIDIAHVETGEMVHQIPVKASTFSVAWHPKRHLLAFA 300
BLAST of NO30G01070 vs. NCBI_GenBank
Match: ORX75402.1 (WD40 repeat-like protein [Anaeromyces robustus]) HSP 1 Score: 191.4 bits (485), Expect = 5.400e-45 Identity = 107/294 (36.39%), Postives = 165/294 (56.12%), Query Frame = 0 Query: 72 GHRRKVTCLKFNRSGSLLATGAADGSLRIYATVSTPQGLTALSSSTASTLDLRGHEKGLSSLGWNPASDTQLATCGYDRTVRLWDARHKGHETHKVTTAGSHAVNVNLAWSPNGQNLAVSNVHDQISFFDVRRFSSAEGCKRMSYKYEVHDFSWSPAGNHWVVCGAMRNGTGWLEVYTYPRQDSVFTTEAHTSTCLALSLDPTHQHLALGSADGLVSIWGLEELLPLRTMDRFNTAVSSLDFSYDGRWLAVGSEDSSSIDVTEVASGKQLALLKTEGGVNALAWHPKACLLAWS 366 GHR+KV + +N G LA+G+ D + R++ SSS ++L+GH + L W+P LAT D+TVR+WD+R G H + T+G N+N+ WSP+G+ +AV N D ISF D R + + EV++ SW+ G+ + + +G G +EV YP + + +AHT+ C L DP ++LA GSAD LVS+W +E+L +RT N V ++ FS+DG +LA SED ID++ V +G+Q+ ++ +N+LAWHP LLA++ Sbjct: 32 GHRQKVHTVGWNIEGKKLASGSVDQTARVWN--------IERSSSHRDCIELKGHTGSVDQLCWDPTHSEYLATASADKTVRIWDSR-AGKCIHVIPTSGE---NINICWSPDGKQIAVGNKEDLISFIDTR---THKVVNTKQNDIEVNEISWNYGGDKFF----LTSGQGTIEVLEYPSLKELKSIQAHTANCYCLEFDPNGRYLATGSADTLVSLWEVEDLTCIRTFGNLNWPVRTISFSHDGEYLASASED-LFIDISNVETGEQVHKIECNAAMNSLAWHPSKYLLAYA 305 The following BLAST results are available for this feature:
BLAST of NO30G01070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G01070 ID=NO30G01070|Name=NO30G01070|organism=Nannochloropsis oceanica|type=gene|length=2762bpback to top protein sequence of NO30G01070.1 >NO30G01070.1-protein ID=NO30G01070.1-protein|Name=NO30G01070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=406bpback to top Synonyms
Publications
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