jgi.p|Nanoce1779_2|610492, gene_10226 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|610492
Unique Namegene_10226
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_50:64010..68391 +

Link to JBrowse

Properties
Property NameValue
TranscriptId610578
ProteinId610492
Product namePyridoxal phosphate-dependent transferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_50supercontigscaffold_50:64010..68391 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016769transferase activity, transferring nitrogenous groups
GO:0030170pyridoxal phosphate binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL073ncniL073Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO30G01120NO30G01120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|610492mRNA_10226-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|610492mRNA_10226Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|610492

>mRNA_10226-protein ID=mRNA_10226-protein|Name=jgi.p|Nanoce1779_2|610492|organism=Nannochloropsis oceanica|type=polypeptide|length=379bp
MASEGMTTDNQGRWDRTTQTYHGGQDWRNIGNFIEDFSVTTNGLGTPVKA
LEAARKAVDEIGHYPPADFEPAISHLASFLWPGKEEGGREGGEVHKPLLL
LGNGASELIDLVVRQATPGKWKPGDTATQYKEYERSAKAAGFTTTDATDP
SASLLCMVNPTNPTGDYLTVEKIKAYIEANAATGTTVIVDESMQPWVGHH
WRDDSLIHQRAWAKALSTDKDIHVWVMTSWTKIWSCTGVRLGSVVAPTAE
ALAQLKAKQVPWSVNCIALAFLSAVVQDHAYLDETWRLTPLWNRALRSEL
ADRFPSWKVHGEIYLSWVWVDTGDAAVTTEAVKLASAVGTPVRSAGPGYN
MPTFFRIAVRDAKLTNILLEAWSPLRKK*
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Synonyms
Publications