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Properties
| Property Name | Value |
|---|
| TranscriptId | 341526 |
| Track | FilteredModels2 |
| ProteinId | 341440 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_50 | supercontig | scaffold_50:16836..18043 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10209 ID=mRNA_10209|Name=jgi.p|Nanoce1779_2|341440|organism=Nannochloropsis oceanica|type=mRNA|length=926bp
CTCCCTACCTCCAAGCGCTCTCTTCACCGCTGGCATGGGGAGGCTTCAAG
AACCAAACCACGCACATTTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCC
TCAGGGATCTTCGGGGGCCTCGTCGGCGTGCTTTGCGCTCTCTTAATCCC
TCCTTCTGCCTACGGAGGTGACATTCACGCCATTTACGACGCCCGAGTCA
ACAACCCTGTAGCGGTACGTCCTCCCTCCCTCTCTCCCTCCTTCCCTCCT
TCCCTCCCTTCCTCCCTTCCTTTTATCTCTTCAGGCGGCATTCACGCGCA
AAGGGGAGAGGAGGGAGGAAGGGAAGGAGGGAAGGAGGGAGGGGGGGAAA
AAGAGATGACAGACGAGAACATGAGTGTATCAATACGGAAATTCCAAAAC
AATCAACGTACCACTCAATCGAAATCAATCAATCAATCAATCATGACAAA
TCGATCATCACATCAACGCACACACTCTCGCATCACATCACATCACATCA
ACACACAGGGAAACGCCGGCCGAGGGGCTGCCCTTCAATCCATCTATCAA
GTGCTTGCCATTGTCACAGCCCTCGTTTTTGCCGTCGTCGGTGGGACCAT
CACCGGCTACGTCCTCAAGGCTGTCCCTCATTCCGTCCCTCCCGGGAAAC
TTTTCATGGATGATGCCGATTGGGAAGTGCCCTCCCTCCAGCCCTCCTTC
GGCCGCTTCTTCTCCCAACGCTACACGAAGGAGGGAGGGAGGGAGGGAGG
GAAGACGGTGTCGTTCGGAAAAAATAATGGGGGTCTGCATGCGAAGTACG
AGAGCATCGGGGAGGGAGGGGGTGGGCTGGTCTAGCCTCCTCCGTCGGTC
CCTCCCTCCCTTCCTCCCTTTCTCCCTTCTTTCTTCCTTTACTCTCCTGC
GAAGGAAGGAAGGGTGGGAGGGAGGG back to topprotein sequence of jgi.p|Nanoce1779_2|341440 >mRNA_10209-protein ID=mRNA_10209-protein|Name=jgi.p|Nanoce1779_2|341440|organism=Nannochloropsis oceanica|type=polypeptide|length=267bp
MGRLQEPNHAHFPPFLPPSLPPSGIFGGLVGVLCALLIPPSAYGGDIHAI
YDARVNNPVAVRPPSLSPSFPPSLPSSLPFISSGGIHAQRGEEGGREGGK
EGGGEKEMTDENMSVSIRKFQNNQRTTQSKSINQSIMTNRSSHQRTHSRI
TSHHINTQGNAGRGAALQSIYQVLAIVTALVFAVVGGTITGYVLKAVPHS
VPPGKLFMDDADWEVPSLQPSFGRFFSQRYTKEGGREGGKTVSFGKNNGG
LHAKYESIGEGGGGLV* back to topmRNA from alignment at scaffold_50:16836..18043- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10209 ID=mRNA_10209|Name=jgi.p|Nanoce1779_2|341440|organism=Nannochloropsis oceanica|type=mRNA|length=1208bp|location=Sequence derived from alignment at scaffold_50:16836..18043- (Nannochloropsis oceanica)
CTCCCTACCTCCAAGCGCTCTCTTCACCGCTGGCATGGGGAGGCTTCAAG
AACCAAACCACGCACATTTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCC
TCAGGGATCTTCGGGGGCCTCGTCGGCGTGCTTTGCGCTCTCTTAATCCC
TCCTTCTGCCTACGGAGGTGACATTCACGCCATTTACGACGCCCGAGTCA
ACAACCCTGTAGCGGTACGTCCTCCCTCCCTCTCTCCCTCCTTCCCTCCT
TCCCTCCCTTCCTCCCTTCCTTTTATCTCTTCAGGCGGCATTCACGCGCA
AAGGGGAGAGGAGGGAGGAAGGGAAGGAGGGAAGGAGGGAGGGGGGGAAA
AAGAGATGACAGACGAGAACATGAGTGTATCAATACGGAAATTCCAAAAC
AATCAACGTACCACTCAATCGAAATCAATCAATCAATCAATCATGACAAA
TCGATCATCACATCAACGCACACACTCTCGCATCACATCACATCACATCA
ACACACAGGGAAACGCCGGCCGAGGGGCTGCCCTTCAATCCATCTATCAA
GTGCTTGCCATTGTCACAGCCCTCGTTTTTGCCGTCGTCGGTGGGACCAT
CACCGGCTACGTCCTCAAGGTATGATCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCTTCCCTCTTT
TCCTCCTTCCTTTCCTTGTGCATCCCTTCCCTCTCTCCCTCTTCCTCTCT
CTCCCCACCGTGCCTTTCTCGTCCATCCCGTCATTCTGACGCTCCTGTCG
TGATTCACATACACCTCCCCAAAATACACATCCTCTCCCGTCCTCCTCTT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCCTCCCTCA
GGCTGTCCCTCATTCCGTCCCTCCCGGGAAACTTTTCATGGATGATGCCG
ATTGGGAAGTGCCCTCCCTCCAGCCCTCCTTCGGCCGCTTCTTCTCCCAA
CGCTACACGAAGGAGGGAGGGAGGGAGGGAGGGAAGACGGTGTCGTTCGG
AAAAAATAATGGGGGTCTGCATGCGAAGTACGAGAGCATCGGGGAGGGAG
GGGGTGGGCTGGTCTAGCCTCCTCCGTCGGTCCCTCCCTCCCTTCCTCCC
TTTCTCCCTTCTTTCTTCCTTTACTCTCCTGCGAAGGAAGGAAGGGTGGG
AGGGAGGG back to topCoding sequence (CDS) from alignment at scaffold_50:16836..18043- >mRNA_10209 ID=mRNA_10209|Name=jgi.p|Nanoce1779_2|341440|organism=Nannochloropsis oceanica|type=CDS|length=1602bp|location=Sequence derived from alignment at scaffold_50:16836..18043- (Nannochloropsis oceanica)
GCTGTCCCTCATTCCGTCCCTCCCGGGAAACTTTTCATGGATGATGCCGA
TTGGGAAGTGCCCTCCCTCCAGCCCTCCTTCGGCCGCTTCTTCTCCCAAC
GCTACACGAAGGAGGGAGGGAGGGAGGGAGGGAAGACGGTGTCGTTCGGA
AAAAATAATGGGGGTCTGCATGCGAAGTACGAGAGCATCGGGGAGGGAGG
GGGTGGGCTGGTCTAGATGGGGAGGCTTCAAGAACCAAACCACGCACATT
TCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCAGGGATCTTCGGGGGC
CTCGTCGGCGTGCTTTGCGCTCTCTTAATCCCTCCTTCTGCCTACGGAGG
TGACATTCACGCCATTTACGACGCCCGAGTCAACAACCCTGTAGCGGTAC
GTCCTCCCTCCCTCTCTCCCTCCTTCCCTCCTTCCCTCCCTTCCTCCCTT
CCTTTTATCTCTTCAGGCGGCATTCACGCGCAAAGGGGAGAGGAGGGAGG
AAGGGAAGGAGGGAAGGAGGGAGGGGGGGAAAAAGAGATGACAGACGAGA
ACATGAGTGTATCAATACGGAAATTCCAAAACAATCAACGTACCACTCAA
TCGAAATCAATCAATCAATCAATCATGACAAATCGATCATCACATCAACG
CACACACTCTCGCATCACATCACATCACATCAACACACAGGGAAACGCCG
GCCGAGGGGCTGCCCTTCAATCCATCTATCAAGTGCTTGCCATTGTCACA
GCCCTCGTTTTTGCCGTCGTCGGTGGGACCATCACCGGCTACGTCCTCAA
GGCTGTCCCTCATTCCGTCCCTCCCGGGAAACTTTTCATGGATGATGCCG
ATTGGGAAGTGCCCTCCCTCCAGCCCTCCTTCGGCCGCTTCTTCTCCCAA
CGCTACACGAAGGAGGGAGGGAGGGAGGGAGGGAAGACGGTGTCGTTCGG
AAAAAATAATGGGGGTCTGCATGCGAAGTACGAGAGCATCGGGGAGGGAG
GGGGTGGGCTGGTCTAGATGGGGAGGCTTCAAGAACCAAACCACGCACAT
TTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCAGGGATCTTCGGGGG
CCTCGTCGGCGTGCTTTGCGCTCTCTTAATCCCTCCTTCTGCCTACGGAG
GTGACATTCACGCCATTTACGACGCCCGAGTCAACAACCCTGTAGCGGTA
CGTCCTCCCTCCCTCTCTCCCTCCTTCCCTCCTTCCCTCCCTTCCTCCCT
TCCTTTTATCTCTTCAGGCGGCATTCACGCGCAAAGGGGAGAGGAGGGAG
GAAGGGAAGGAGGGAAGGAGGGAGGGGGGGAAAAAGAGATGACAGACGAG
AACATGAGTGTATCAATACGGAAATTCCAAAACAATCAACGTACCACTCA
ATCGAAATCAATCAATCAATCAATCATGACAAATCGATCATCACATCAAC
GCACACACTCTCGCATCACATCACATCACATCAACACACAGGGAAACGCC
GGCCGAGGGGCTGCCCTTCAATCCATCTATCAAGTGCTTGCCATTGTCAC
AGCCCTCGTTTTTGCCGTCGTCGGTGGGACCATCACCGGCTACGTCCTCA
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