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Properties
| Property Name | Value |
|---|
| TranscriptId | 610537 |
| Track | FilteredModels2 |
| ProteinId | 610451 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_50 | supercontig | scaffold_50:38332..39873 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10218 ID=mRNA_10218|Name=jgi.p|Nanoce1779_2|610451|organism=Nannochloropsis oceanica|type=mRNA|length=1151bp
CGCCCCTTCGAGCGCTTCTGTGTACCGGCCCATCAGTCCCCTGTCAGTTC
CAAAACACATAGATGCACGACACACAAGCAAGCCTCGTCCTCGAAAGTCG
AAGAGCTCGTCAGGCGCGCTCCATCTCGAGAGGAATTCATCGATCTGCCA
AATGTGACGTCTCGAGACCCCATGCGAAATTTATGCCACAACCGAGCTTC
TGTTCTACACGGGGATCCCCTCCGCAGACCATTTAGGCACGACATAGGCC
ACCAAATAGCGCTCTCCACAAGATATTCAAGAACGTGAATTCCATTTGGA
AAAGAACCCCACCCTTATCGAGCATTATGTGGCGCGGCTCTGCCACCGCT
ATAAGCCGCCGGCTCTTCAAGCTTTTGAATGACCAAGGCAACCGCGAACT
TGAGAATATGCTGGCCTACACTGCATCCTCGCATTGGTTCGACCACAACG
AGCTTCCCGGGAGTGCGAGCTGGTGCAAGACTCACGCAGAGGAAGAACGG
GGCCATGCCATGAAGATTCTTGATCATTTATCTTTACGCCGTATCGAAGA
GGCCGTGACAGGCTCGGCGGGGGAAGAAGGCGACGTTGGAAGCGCCAGCA
GCAGCAGCGGCGAGGCAGAGGCAGGAGAGGCTGCCAAACGCAAGCCGAGC
GTGCGCCAGCTCAAGACCGAGGCCGACCCTCAAGCCAGCACGGCATTCAC
CTGGGAAGAGAACCCCAATATTGTTTTGGATGTCAAGGGGCCTTTCATGA
CGACCTTTTCCGATCCTGCTGCCATCTGGCGTTCGGCTCTGGAGCAGGAA
CGGGAAAATTCGAGACGCTTTTTCCACATCATGGCGGCGGCGCGCGAGAC
TCAAGATTATGTGACGGAGAATTTCCTGCTCAATTACTTCATTCCGGAAC
AGCTGAATGAGGAGAAGGCGGTGGAGGAGATTTTTTCCAATACATTGTTG
GTCATGAAGCGGGGCCCTGAGTATTATTTTGAATTGGATCGCGAGTTACC
CTCGAAGCCGCACTAAGTAAGCTTGGCTTGACACAAGGAAGGGAATCATA
TAGAGCTGGAGGATGCAGGTTCGGGACAAAGAAAAGTGGACCAGAGACAT
CAACAAGTACAGCAGGACAGAAATACAAGAAACTTTTCCCACAACCTGTA
A back to topprotein sequence of jgi.p|Nanoce1779_2|610451 >mRNA_10218-protein ID=mRNA_10218-protein|Name=jgi.p|Nanoce1779_2|610451|organism=Nannochloropsis oceanica|type=polypeptide|length=230bp
MWRGSATAISRRLFKLLNDQGNRELENMLAYTASSHWFDHNELPGSASWC
KTHAEEERGHAMKILDHLSLRRIEEAVTGSAGEEGDVGSASSSSGEAEAG
EAAKRKPSVRQLKTEADPQASTAFTWEENPNIVLDVKGPFMTTFSDPAAI
WRSALEQERENSRRFFHIMAAARETQDYVTENFLLNYFIPEQLNEEKAVE
EIFSNTLLVMKRGPEYYFELDRELPSKPH* back to topmRNA from alignment at scaffold_50:38332..39873- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10218 ID=mRNA_10218|Name=jgi.p|Nanoce1779_2|610451|organism=Nannochloropsis oceanica|type=mRNA|length=1542bp|location=Sequence derived from alignment at scaffold_50:38332..39873- (Nannochloropsis oceanica)
CGCCCCTTCGAGCGCTTCTGTGTACCGGCCCATCAGTCCCCTGTCAGTTC
CAAAACACATAGATGCACGACACACAAGCAAGCCTCGTCCTCGAAAGTCG
AAGAGCTCGTCAGGCGCGCTCCATCTCGAGAGGAATTCATCGATCTGCCA
AATGTGACGTCTCGAGACCCCATGCGAAATTTATGCCACAACCGAGCTTC
TGTTCTACACGGGGATCCCCTCCGCAGACCATTTAGGCACGACATAGGCC
ACCAAATAGCGCTCTCCACAAGATATTCAAGAACGTGAATTCCATTTGGA
AAAGGTACCCAATCAAAACCAATGAATTCATCGTGTGGTGCGTCCTAATA
ACCTCCTGGCTCCAGAACAAAACAACTTTGCACCTCGTCCTAGCTGTGGG
TTGCTACACCCATAAATTGAATCATAATTCTCAAAATCATTAGACAGTCA
GCACTCCGCATGATGGTGATAATATTTTGTGGCGCACTGCGCGGCGTGTA
GCTCAATCAGCCCTTCTTCTCATCCCTCTCTTTCCACTCTCCCGTCCCAA
ACCTACAAGAACCCCACCCTTATCGAGCATTATGTGGCGCGGCTCTGCCA
CCGCTATAAGCCGCCGGCTCTTCAAGCTTTTGAATGACCAAGGCAACCGC
GAACTTGAGAATATGCTGGCCTACACTGCATCCTCGCATTGGTTCGACCA
CAACGAGCTTCCCGGGAGTGCGAGCTGGTGCAAGACTCACGCAGAGGAAG
AACGGGGCCATGCCATGAAGATTCTTGATCATTTATCTTTACGCCGTATC
GAAGAGGCCGTGACAGGCTCGGCGGGGGAAGAAGGCGACGTTGGAAGCGC
CAGCAGCAGCAGCGGCGAGGCAGAGGCAGGAGAGGCTGCCAAACGCAAGC
CGAGCGTGCGCCAGCTCAAGACCGAGGCCGACCCTCAAGCCAGCACGGCA
TTCACCTGGGAAGAGAACCCCAATATTGTTTTGGATGTCAAGGGGCCTTT
CATGACGACCTTTTCCGATCCTGCTGCCATCTGGCGTTCGGCTCTGGAGC
AGGAACGGGAAAATTCGAGACGCTTTTTCCACATCATGGCGGCGGCGCGC
GAGACTCAAGATTATGTGACGGAGAATTTCCTGCTCAATTACTTCATTCC
GGAACAGCTGAATGAGGAGAAGGCGGTGGAGGAGATTTTTTCCAATACAG
TAAGAGGGAGGTGGTAGCGGGCTGGTTGGACGGTAGGGAGAAATGCAATA
TGTAGAACAGTGATTAAGGGGTTTAACATGTGAACAATATTATCCCAGTC
TCTCAACTTTATTATTTTTCTACTACCACGCACAGTTGTTGGTCATGAAG
CGGGGCCCTGAGTATTATTTTGAATTGGATCGCGAGTTACCCTCGAAGCC
GCACTAAGTAAGCTTGGCTTGACACAAGGAAGGGAATCATATAGAGCTGG
AGGATGCAGGTTCGGGACAAAGAAAAGTGGACCAGAGACATCAACAAGTA
CAGCAGGACAGAAATACAAGAAACTTTTCCCACAACCTGTAA back to topCoding sequence (CDS) from alignment at scaffold_50:38332..39873- >mRNA_10218 ID=mRNA_10218|Name=jgi.p|Nanoce1779_2|610451|organism=Nannochloropsis oceanica|type=CDS|length=1380bp|location=Sequence derived from alignment at scaffold_50:38332..39873- (Nannochloropsis oceanica)
TTGTTGGTCATGAAGCGGGGCCCTGAGTATTATTTTGAATTGGATCGCGA
GTTACCCTCGAAGCCGCACTAAATGTGGCGCGGCTCTGCCACCGCTATAA
GCCGCCGGCTCTTCAAGCTTTTGAATGACCAAGGCAACCGCGAACTTGAG
AATATGCTGGCCTACACTGCATCCTCGCATTGGTTCGACCACAACGAGCT
TCCCGGGAGTGCGAGCTGGTGCAAGACTCACGCAGAGGAAGAACGGGGCC
ATGCCATGAAGATTCTTGATCATTTATCTTTACGCCGTATCGAAGAGGCC
GTGACAGGCTCGGCGGGGGAAGAAGGCGACGTTGGAAGCGCCAGCAGCAG
CAGCGGCGAGGCAGAGGCAGGAGAGGCTGCCAAACGCAAGCCGAGCGTGC
GCCAGCTCAAGACCGAGGCCGACCCTCAAGCCAGCACGGCATTCACCTGG
GAAGAGAACCCCAATATTGTTTTGGATGTCAAGGGGCCTTTCATGACGAC
CTTTTCCGATCCTGCTGCCATCTGGCGTTCGGCTCTGGAGCAGGAACGGG
AAAATTCGAGACGCTTTTTCCACATCATGGCGGCGGCGCGCGAGACTCAA
GATTATGTGACGGAGAATTTCCTGCTCAATTACTTCATTCCGGAACAGCT
GAATGAGGAGAAGGCGGTGGAGGAGATTTTTTCCAATACATTGTTGGTCA
TGAAGCGGGGCCCTGAGTATTATTTTGAATTGGATCGCGAGTTACCCTCG
AAGCCGCACTAAATGTGGCGCGGCTCTGCCACCGCTATAAGCCGCCGGCT
CTTCAAGCTTTTGAATGACCAAGGCAACCGCGAACTTGAGAATATGCTGG
CCTACACTGCATCCTCGCATTGGTTCGACCACAACGAGCTTCCCGGGAGT
GCGAGCTGGTGCAAGACTCACGCAGAGGAAGAACGGGGCCATGCCATGAA
GATTCTTGATCATTTATCTTTACGCCGTATCGAAGAGGCCGTGACAGGCT
CGGCGGGGGAAGAAGGCGACGTTGGAAGCGCCAGCAGCAGCAGCGGCGAG
GCAGAGGCAGGAGAGGCTGCCAAACGCAAGCCGAGCGTGCGCCAGCTCAA
GACCGAGGCCGACCCTCAAGCCAGCACGGCATTCACCTGGGAAGAGAACC
CCAATATTGTTTTGGATGTCAAGGGGCCTTTCATGACGACCTTTTCCGAT
CCTGCTGCCATCTGGCGTTCGGCTCTGGAGCAGGAACGGGAAAATTCGAG
ACGCTTTTTCCACATCATGGCGGCGGCGCGCGAGACTCAAGATTATGTGA
CGGAGAATTTCCTGCTCAATTACTTCATTCCGGAACAGCTGAATGAGGAG
AAGGCGGTGGAGGAGATTTTTTCCAATACA back to top
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