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Properties
| Property Name | Value |
|---|
| TranscriptId | 342838 |
| Track | FilteredModels2 |
| ProteinId | 342752 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_50 | supercontig | scaffold_50:105374..106680 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10241 ID=mRNA_10241|Name=jgi.p|Nanoce1779_2|342752|organism=Nannochloropsis oceanica|type=mRNA|length=907bp
TGCGGAGATTTAAAACGTTTCTTCCTCCTTCCTTCCTTCCCTCCCTCCCT
TTCTCCCTTCTTCCCTCCCATCCTCCCTCCCTCCCTCCAGGCCAAGACGC
AGCACCAAGCCTATGTAGGGCGATGGCTGGCGTTCTTCCAAGATTTTGAC
TTCTTGCTCACACCCACCGTGATGCTCCCTGCCTTCGACGCACGCCTGCG
TTATCCTACCCGGATAGCTTCCACCTTCCTTCCTTCCTACATCGACTGGC
TGCGTCTCTCATCGGTCGTCACGCTCTCCTGTGGACCTGCACTCTCCCTG
CCCTGCGGTCTCACGCACGACGGACGGCCGGTGGGACTGCAAATCATAGG
CCCTCCCTACAGCGAGGCCCGGCTGCTGGCTCTAGCGGCTCTCTATGAAC
AAGCACATCCCTTCCACGCGCTTGTGCCACGCGAGCCCGCGCACACCGCC
GACGAAGAGGAAACGATTCCAACCATGACGGCAACGACAGCAGCAGCAGC
GGGAGCAGCGGGAGCAGCGGGAGCAGCGGTGAAGCCTCTTCCTTTCTACC
CCGGGCCGAGGACGACGGAAGAGGCGGCGGAGCTGTGTGGATTTAGGGTG
CCACAGGAGGGAGTGCAAAGGGAAGATGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGGGGTAGGGGAGTGGGAAGATCATTTCTGT
GAGTGCTGAAGAGGTGTGTTACGAAAAGAATGATACACGTCCATTAATGA
AAGTAGACAGAAGGATGCTTTCATGGGCCTGCAAGTAGCCGACAAAAGCG
TGTCCAATGTCACTCATCTCCTGTCACTCACACCTGTGTATACAAGGATG
AACGGATGAGAAGCAAAGAAGATTACAAACAGCCAGGACTCAGTCTTTCT
CCCTCCT back to topprotein sequence of jgi.p|Nanoce1779_2|342752 >mRNA_10241-protein ID=mRNA_10241-protein|Name=jgi.p|Nanoce1779_2|342752|organism=Nannochloropsis oceanica|type=polypeptide|length=177bp
MLPAFDARLRYPTRIASTFLPSYIDWLRLSSVVTLSCGPALSLPCGLTHD
GRPVGLQIIGPPYSEARLLALAALYEQAHPFHALVPREPAHTADEEETIP
TMTATTAAAAGAAGAAGAAVKPLPFYPGPRTTEEAAELCGFRVPQEGVQR
EDGGGGGGGGGGGGGGGGRGVGRSFL* back to topmRNA from alignment at scaffold_50:105374..106680- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10241 ID=mRNA_10241|Name=jgi.p|Nanoce1779_2|342752|organism=Nannochloropsis oceanica|type=mRNA|length=1307bp|location=Sequence derived from alignment at scaffold_50:105374..106680- (Nannochloropsis oceanica)
TGCGGAGATTTAAAACGTTTCTTCCTCCTTCCTTCCTTCCCTCCCTCCCT
TTCTCCCTTCTTCCCTCCCATCCTCCCTCCCTCCCTCCAGGCCAAGACGC
AGCACCAAGCCTATGTAGGGCGATGGCTGGCGTTCTTCCAAGATTTTGAC
TTCTTGCTCACACCCACCGTGATGGTGAGGGAGGGAGGGAGAAAAAGAGG
GAGGGAGGGAAGGAGGAAAAGAGGGAGGAAGTGTGGAAAGGGGGAGGGTG
TAAAATGTATGGAGTGTTTTTAACCCTCCCTCCTAGATTGACACTTCTCC
ATTTCCTCCCTTTCTCCTTCATTCCCTCCCTCTCTTCCTCTTTCCCTCCC
TCCCAGCTCCCTGCCTTCGACGCACGCCTGCGTTATCCTACCCGGATAGC
TTCCACCTTCCTTCCTTCCTACATCGACTGGCTGCGTCTCTCATCGGTCG
TCACGCTCTCCTGTGGACCTGCACTCTCCCTGCCCTGCGGTCTCACGCAC
GACGGACGGCCGGTGGGACTGCAAATCATAGGTCAAGAAGGGAGGGAGGA
AGGGAGGGAGAGAGGGAGTGAAGGAGAAAAAAGGAAATCGGGCGCTGTAT
ACAAATAATCGTTTCCACCTTTCTCTCAACGTCTCTCAACGGATGAACAT
TGAAAACTCATGCTGAGTAGACTTAGAGCAATTACTCTCCGTAACTCTCC
TTTTCTCTTCCCTTCTCTCACCCCCCTCTTCCTTCCCTTCCTCGTCCAGG
CCCTCCCTACAGCGAGGCCCGGCTGCTGGCTCTAGCGGCTCTCTATGAAC
AAGCACATCCCTTCCACGCGCTTGTGCCACGCGAGCCCGCGCACACCGCC
GACGAAGAGGAAACGATTCCAACCATGACGGCAACGACAGCAGCAGCAGC
GGGAGCAGCGGGAGCAGCGGGAGCAGCGGTGAAGCCTCTTCCTTTCTACC
CCGGGCCGAGGACGACGGAAGAGGCGGCGGAGCTGTGTGGATTTAGGGTG
CCACAGGAGGGAGTGCAAAGGGAAGATGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGGGGTAGGGGAGTGGGAAGATCATTTCTGT
GAGTGCTGAAGAGGTGTGTTACGAAAAGAATGATACACGTCCATTAATGA
AAGTAGACAGAAGGATGCTTTCATGGGCCTGCAAGTAGCCGACAAAAGCG
TGTCCAATGTCACTCATCTCCTGTCACTCACACCTGTGTATACAAGGATG
AACGGATGAGAAGCAAAGAAGATTACAAACAGCCAGGACTCAGTCTTTCT
CCCTCCT back to topCoding sequence (CDS) from alignment at scaffold_50:105374..106680- >mRNA_10241 ID=mRNA_10241|Name=jgi.p|Nanoce1779_2|342752|organism=Nannochloropsis oceanica|type=CDS|length=1593bp|location=Sequence derived from alignment at scaffold_50:105374..106680- (Nannochloropsis oceanica)
GCCCTCCCTACAGCGAGGCCCGGCTGCTGGCTCTAGCGGCTCTCTATGAA
CAAGCACATCCCTTCCACGCGCTTGTGCCACGCGAGCCCGCGCACACCGC
CGACGAAGAGGAAACGATTCCAACCATGACGGCAACGACAGCAGCAGCAG
CGGGAGCAGCGGGAGCAGCGGGAGCAGCGGTGAAGCCTCTTCCTTTCTAC
CCCGGGCCGAGGACGACGGAAGAGGCGGCGGAGCTGTGTGGATTTAGGGT
GCCACAGGAGGGAGTGCAAAGGGAAGATGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGGGGTAGGGGAGTGGGAAGATCATTTCTG
TGACTCCCTGCCTTCGACGCACGCCTGCGTTATCCTACCCGGATAGCTTC
CACCTTCCTTCCTTCCTACATCGACTGGCTGCGTCTCTCATCGGTCGTCA
CGCTCTCCTGTGGACCTGCACTCTCCCTGCCCTGCGGTCTCACGCACGAC
GGACGGCCGGTGGGACTGCAAATCATAGATGGCCCTCCCTACAGCGAGGC
CCGGCTGCTGGCTCTAGCGGCTCTCTATGAACAAGCACATCCCTTCCACG
CGCTTGTGCCACGCGAGCCCGCGCACACCGCCGACGAAGAGGAAACGATT
CCAACCATGACGGCAACGACAGCAGCAGCAGCGGGAGCAGCGGGAGCAGC
GGGAGCAGCGGTGAAGCCTCTTCCTTTCTACCCCGGGCCGAGGACGACGG
AAGAGGCGGCGGAGCTGTGTGGATTTAGGGTGCCACAGGAGGGAGTGCAA
AGGGAAGATGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGGGGTAGGGGAGTGGGAAGATCATTTCTGTGACTCCCTGCCTTCGACG
CACGCCTGCGTTATCCTACCCGGATAGCTTCCACCTTCCTTCCTTCCTAC
ATCGACTGGCTGCGTCTCTCATCGGTCGTCACGCTCTCCTGTGGACCTGC
ACTCTCCCTGCCCTGCGGTCTCACGCACGACGGACGGCCGGTGGGACTGC
AAATCATAGATGGCCCTCCCTACAGCGAGGCCCGGCTGCTGGCTCTAGCG
GCTCTCTATGAACAAGCACATCCCTTCCACGCGCTTGTGCCACGCGAGCC
CGCGCACACCGCCGACGAAGAGGAAACGATTCCAACCATGACGGCAACGA
CAGCAGCAGCAGCGGGAGCAGCGGGAGCAGCGGGAGCAGCGGTGAAGCCT
CTTCCTTTCTACCCCGGGCCGAGGACGACGGAAGAGGCGGCGGAGCTGTG
TGGATTTAGGGTGCCACAGGAGGGAGTGCAAAGGGAAGATGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGTAGGGGAGTGGGA
AGATCATTTCTGTGACTCCCTGCCTTCGACGCACGCCTGCGTTATCCTAC
CCGGATAGCTTCCACCTTCCTTCCTTCCTACATCGACTGGCTGCGTCTCT
CATCGGTCGTCACGCTCTCCTGTGGACCTGCACTCTCCCTGCCCTGCGGT
CTCACGCACGACGGACGGCCGGTGGGACTGCAAATCATAGATG back to top
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