jgi.p|Nanoce1779_2|674676, gene_10237 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|674676
Unique Namegene_10237
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_50:86932..89641 -

Link to JBrowse

Properties
Property NameValue
TranscriptId674762
ProteinId674676
Product name6-phosphogluconate dehydrogenase, C-terminal-like protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_50supercontigscaffold_50:86932..89641 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00086772-dehydropantoate 2-reductase activity
GO:0050661NADP binding
GO:0016491oxidoreductase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL073ncniL073Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO30G01200NO30G01200Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674676mRNA_10237-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674676mRNA_10237Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|674676

>mRNA_10237-protein ID=mRNA_10237-protein|Name=jgi.p|Nanoce1779_2|674676|organism=Nannochloropsis oceanica|type=polypeptide|length=591bp
MPSVYCVAASTVETFLTRALSPSKTPATAKAIRSISAPTMHTVQPYLQSV
GAMRGVATSSSLFSPAASEAAAPPPLPRPPPETSHYHILGAGAMGCLVGA
ALAHKAGVRVSLLTRHRPLFPTATIHVRETYVRAAAPPSFRHTSPPTSTS
PSSLSSPPSSPSSSSLSFSTTYAPHVFLEENSSSYSNTTSKISHLLVLTK
AYDIKNALKSIAPRLRKDTVVLLLSNGMGYLEEARAALGGGRKGGSSSGS
SSIGGKEIKSEDQEDGPMCVVGTITHGGLKAEGAWEGGGEEEVVATRSSS
SSSSCSDESVHFYVEHTGLGQIHLGMPLFPSSSSSSSSSSSASASSTPSP
APSPPPLLSSLLSHLALAELFPVWESPENMRKMLWKKLGVNVVINPLTAL
LGCRNGEILDYCARALPPSLPPSLFSSSSSSDGVNLEELVRELCKETAAV
AAAVEQEEFGTSFPSSSSPSSLPPSFPPSSSMPTAEELEKFTLQVAKATA
GNQSSMHRDLAWEGGREGGRGRRERKTEIEYLNGFIVREGRRLGVPVPRH
EVLTASVRRREEEGVREGGGKRGRTRTVVEGEKADKDEQG*
back to top
Synonyms
Publications