scaffold_40, scaffold_40 (supercontig) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	scaffold_40
Unique Name	scaffold_40
Type	supercontig
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	198727
Alignment location	jgi.p\|Nanoce1779_2\|301238:2838..3858 +
Alignment location	jgi.p\|Nanoce1779_2\|301238:2838..3858 +
Alignment location	CDS_9046:3163..3318 +
Alignment location	CDS_9046:3458..3763 +
Alignment location	jgi.p\|Nanoce1779_2\|301562:20199..20964 -
Alignment location	jgi.p\|Nanoce1779_2\|301562:20199..20964 -
Alignment location	CDS_9055:20678..20847 -
Alignment location	CDS_9055:20280..20568 -
Alignment location	jgi.p\|Nanoce1779_2\|301596:25821..29377 -
Alignment location	jgi.p\|Nanoce1779_2\|301596:25821..29377 -
Alignment location	CDS_9058:26036..29284 -
Alignment location	jgi.p\|Nanoce1779_2\|301684:41225..44438 -
Alignment location	jgi.p\|Nanoce1779_2\|301684:41225..44438 -
Alignment location	CDS_9065:44178..44414 -
Alignment location	CDS_9065:41333..44008 -
Alignment location	jgi.p\|Nanoce1779_2\|301891:57476..58748 +
Alignment location	jgi.p\|Nanoce1779_2\|301891:57476..58748 +
Alignment location	CDS_9072:57694..57769 +
Alignment location	CDS_9072:57964..58085 +
Alignment location	CDS_9072:58294..58560 +
Alignment location	jgi.p\|Nanoce1779_2\|301951:50018..52350 +
Alignment location	jgi.p\|Nanoce1779_2\|301951:50018..52350 +
Alignment location	CDS_9068:50610..50652 +
Alignment location	CDS_9068:50760..52129 +
Alignment location	jgi.p\|Nanoce1779_2\|533574:87772..88944 -
Alignment location	jgi.p\|Nanoce1779_2\|533574:87772..88944 -
Alignment location	CDS_9085:87772..88944 -
Alignment location	jgi.p\|Nanoce1779_2\|547201:44628..50035 -
Alignment location	jgi.p\|Nanoce1779_2\|547201:44628..50035 -
Alignment location	CDS_9067:49150..49443 -
Alignment location	CDS_9067:47829..49008 -
Alignment location	CDS_9067:47089..47516 -
Alignment location	jgi.p\|Nanoce1779_2\|547211:63806..67802 +
Alignment location	jgi.p\|Nanoce1779_2\|547211:63806..67802 +
Alignment location	CDS_9076:65027..65106 +
Alignment location	CDS_9076:65305..65341 +
Alignment location	CDS_9076:65454..65544 +
Alignment location	CDS_9076:65676..66577 +
Alignment location	CDS_9076:66743..67402 +
Alignment location	jgi.p\|Nanoce1779_2\|547218:69245..74954 +
Alignment location	jgi.p\|Nanoce1779_2\|547218:69245..74954 +
Alignment location	CDS_9078:70163..70397 +
Alignment location	CDS_9078:70549..70883 +
Alignment location	CDS_9078:71049..71081 +
Alignment location	CDS_9078:71211..71289 +
Alignment location	CDS_9078:71439..71537 +
Alignment location	CDS_9078:71681..71912 +
Alignment location	CDS_9078:72043..72487 +
Alignment location	CDS_9078:72767..72919 +
Alignment location	CDS_9078:73180..73442 +
Alignment location	CDS_9078:73702..74092 +
Alignment location	jgi.p\|Nanoce1779_2\|560447:9732..10676 -
Alignment location	jgi.p\|Nanoce1779_2\|560447:9732..10676 -
Alignment location	CDS_9049:10541..10543 -
Alignment location	CDS_9049:10267..10338 -
Alignment location	CDS_9049:10078..10152 -
Alignment location	CDS_9049:9732..9815 -
Alignment location	jgi.p\|Nanoce1779_2\|607884:723..2886 +
Alignment location	jgi.p\|Nanoce1779_2\|607884:723..2886 +
Alignment location	CDS_9045:1116..1572 +
Alignment location	CDS_9045:1667..2436 +
Alignment location	jgi.p\|Nanoce1779_2\|607911:13250..14573 +
Alignment location	jgi.p\|Nanoce1779_2\|607911:13250..14573 +
Alignment location	CDS_9051:13579..13711 +
Alignment location	CDS_9051:14008..14123 +
Alignment location	jgi.p\|Nanoce1779_2\|607926:15511..17399 +
Alignment location	jgi.p\|Nanoce1779_2\|607926:15511..17399 +
Alignment location	CDS_9052:15638..16179 +
Alignment location	CDS_9052:16343..17027 +
Alignment location	jgi.p\|Nanoce1779_2\|607928:17375..19000 -
Alignment location	jgi.p\|Nanoce1779_2\|607928:17375..19000 -
Alignment location	CDS_9053:18031..18978 -
Alignment location	jgi.p\|Nanoce1779_2\|607932:19485..20893 -
Alignment location	jgi.p\|Nanoce1779_2\|607932:19485..20893 -
Alignment location	CDS_9054:19617..20117 -
Alignment location	jgi.p\|Nanoce1779_2\|607941:23824..25811 +
Alignment location	jgi.p\|Nanoce1779_2\|607941:23824..25811 +
Alignment location	CDS_9057:24311..25408 +
Alignment location	jgi.p\|Nanoce1779_2\|607955:30534..32379 -
Alignment location	jgi.p\|Nanoce1779_2\|607955:30534..32379 -
Alignment location	CDS_9060:30947..32257 -
Alignment location	jgi.p\|Nanoce1779_2\|607977:36944..38655 -
Alignment location	jgi.p\|Nanoce1779_2\|607977:36944..38655 -
Alignment location	CDS_9063:38556..38628 -
Alignment location	CDS_9063:37922..38235 -
Alignment location	CDS_9063:37089..37556 -
Alignment location	jgi.p\|Nanoce1779_2\|607981:38868..40513 +
Alignment location	jgi.p\|Nanoce1779_2\|607981:38868..40513 +
Alignment location	CDS_9064:39082..39789 +
Alignment location	CDS_9064:39909..40490 +
Alignment location	jgi.p\|Nanoce1779_2\|607989:45166..47844 +
Alignment location	jgi.p\|Nanoce1779_2\|607989:45166..47844 +
Alignment location	CDS_9066:45182..46276 +
Alignment location	jgi.p\|Nanoce1779_2\|608003:51817..53551 -
Alignment location	jgi.p\|Nanoce1779_2\|608003:51817..53551 -
Alignment location	CDS_9069:53350..53526 -
Alignment location	CDS_9069:53111..53173 -
Alignment location	CDS_9069:52734..52877 -
Alignment location	CDS_9069:52376..52606 -
Alignment location	jgi.p\|Nanoce1779_2\|608007:54559..57104 -
Alignment location	jgi.p\|Nanoce1779_2\|608007:54559..57104 -
Alignment location	CDS_9070:54861..57050 -
Alignment location	jgi.p\|Nanoce1779_2\|608010:57249..58026 +
Alignment location	jgi.p\|Nanoce1779_2\|608010:57249..58026 +
Alignment location	CDS_9071:57270..57315 +
Alignment location	CDS_9071:57432..57610 +
Alignment location	jgi.p\|Nanoce1779_2\|608018:59798..61245 -
Alignment location	jgi.p\|Nanoce1779_2\|608018:59798..61245 -
Alignment location	CDS_9074:61034..61243 -
Alignment location	CDS_9074:60898..60940 -
Alignment location	CDS_9074:60289..60607 -
Alignment location	CDS_9074:59907..60003 -
Alignment location	jgi.p\|Nanoce1779_2\|608020:61391..63006 -
Alignment location	jgi.p\|Nanoce1779_2\|608020:61391..63006 -
Alignment location	CDS_9075:61599..62378 -
Alignment location	jgi.p\|Nanoce1779_2\|608026:67803..69125 -
Alignment location	jgi.p\|Nanoce1779_2\|608026:67803..69125 -
Alignment location	CDS_9077:68406..69101 -
Alignment location	jgi.p\|Nanoce1779_2\|608036:74943..76038 -
Alignment location	jgi.p\|Nanoce1779_2\|608036:74943..76038 -
Alignment location	CDS_9079:75678..76010 -
Alignment location	CDS_9079:75050..75415 -
Alignment location	jgi.p\|Nanoce1779_2\|608037:76745..78413 +
Alignment location	jgi.p\|Nanoce1779_2\|608037:76745..78413 +
Alignment location	CDS_9080:77040..78251 +
Alignment location	jgi.p\|Nanoce1779_2\|608039:78433..79678 -
Alignment location	jgi.p\|Nanoce1779_2\|608039:78433..79678 -
Alignment location	CDS_9081:78479..79651 -
Alignment location	jgi.p\|Nanoce1779_2\|608041:80110..80650 +
Alignment location	jgi.p\|Nanoce1779_2\|608041:80110..80650 +
Alignment location	CDS_9082:80145..80603 +
Alignment location	jgi.p\|Nanoce1779_2\|608047:85902..87578 +
Alignment location	jgi.p\|Nanoce1779_2\|608047:85902..87578 +
Alignment location	CDS_9084:86204..86995 +
Alignment location	jgi.p\|Nanoce1779_2\|633646:6451..7866 +
Alignment location	jgi.p\|Nanoce1779_2\|633646:6451..7866 +
Alignment location	CDS_9048:6516..6560 +
Alignment location	CDS_9048:6673..7188 +
Alignment location	CDS_9048:7517..7864 +
Alignment location	jgi.p\|Nanoce1779_2\|633651:21402..23748 +
Alignment location	jgi.p\|Nanoce1779_2\|633651:21402..23748 +
Alignment location	CDS_9056:21545..22879 +
Alignment location	jgi.p\|Nanoce1779_2\|633663:58028..59822 +
Alignment location	jgi.p\|Nanoce1779_2\|633663:58028..59822 +
Alignment location	CDS_9073:59057..59677 +
Alignment location	jgi.p\|Nanoce1779_2\|633673:83573..85145 +
Alignment location	jgi.p\|Nanoce1779_2\|633673:83573..85145 +
Alignment location	CDS_9083:83600..84851 +
Alignment location	CDS_9083:85078..85145 +
Alignment location	jgi.p\|Nanoce1779_2\|674263:3646..6260 -
Alignment location	jgi.p\|Nanoce1779_2\|674263:3646..6260 -
Alignment location	CDS_9047:6212..6260 -
Alignment location	CDS_9047:3953..5403 -
Alignment location	jgi.p\|Nanoce1779_2\|674271:29427..32378 +
Alignment location	jgi.p\|Nanoce1779_2\|674271:29427..32378 +
Alignment location	CDS_9059:29471..29540 +
Alignment location	CDS_9059:29715..29797 +
Alignment location	CDS_9059:30094..30636 +
Alignment location	jgi.p\|Nanoce1779_2\|301238:3163..3763 +
Alignment location	jgi.p\|Nanoce1779_2\|301562:20280..20847 -
Alignment location	jgi.p\|Nanoce1779_2\|301596:26036..29284 -
Alignment location	jgi.p\|Nanoce1779_2\|301684:41333..44414 -
Alignment location	jgi.p\|Nanoce1779_2\|301891:57694..58560 +
Alignment location	jgi.p\|Nanoce1779_2\|301951:50610..52129 +
Alignment location	jgi.p\|Nanoce1779_2\|533574:87772..88944 -
Alignment location	jgi.p\|Nanoce1779_2\|547201:47089..49443 -
Alignment location	jgi.p\|Nanoce1779_2\|547211:65027..67402 +
Alignment location	jgi.p\|Nanoce1779_2\|547218:70163..74092 +
Alignment location	jgi.p\|Nanoce1779_2\|560447:9732..10543 -
Alignment location	jgi.p\|Nanoce1779_2\|607884:1116..2436 +
Alignment location	jgi.p\|Nanoce1779_2\|607911:13579..14123 +
Alignment location	jgi.p\|Nanoce1779_2\|607926:15638..17027 +
Alignment location	jgi.p\|Nanoce1779_2\|607928:18031..18978 -
Alignment location	jgi.p\|Nanoce1779_2\|607932:19617..20117 -
Alignment location	jgi.p\|Nanoce1779_2\|607941:24311..25408 +
Alignment location	jgi.p\|Nanoce1779_2\|607955:30947..32257 -
Alignment location	jgi.p\|Nanoce1779_2\|607977:37089..38628 -
Alignment location	jgi.p\|Nanoce1779_2\|607981:39082..40490 +
Alignment location	jgi.p\|Nanoce1779_2\|607989:45182..46276 +
Alignment location	jgi.p\|Nanoce1779_2\|608003:52376..53526 -
Alignment location	jgi.p\|Nanoce1779_2\|608007:54861..57050 -
Alignment location	jgi.p\|Nanoce1779_2\|608010:57270..57610 +
Alignment location	jgi.p\|Nanoce1779_2\|608018:59907..61243 -
Alignment location	jgi.p\|Nanoce1779_2\|608020:61599..62378 -
Alignment location	jgi.p\|Nanoce1779_2\|608026:68406..69101 -
Alignment location	jgi.p\|Nanoce1779_2\|608036:75050..76010 -
Alignment location	jgi.p\|Nanoce1779_2\|608037:77040..78251 +
Alignment location	jgi.p\|Nanoce1779_2\|608039:78479..79651 -
Alignment location	jgi.p\|Nanoce1779_2\|608041:80145..80603 +
Alignment location	jgi.p\|Nanoce1779_2\|608047:86204..86995 +
Alignment location	jgi.p\|Nanoce1779_2\|633646:6516..7864 +
Alignment location	jgi.p\|Nanoce1779_2\|633651:21545..22879 +
Alignment location	jgi.p\|Nanoce1779_2\|633663:59057..59677 +
Alignment location	jgi.p\|Nanoce1779_2\|633673:83600..85145 +
Alignment location	jgi.p\|Nanoce1779_2\|674263:3953..6260 -
Alignment location	jgi.p\|Nanoce1779_2\|674271:29471..30636 +
Alignment location	ncniL060:724..88944 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
jgi.p\|Nanoce1779_2\|301238	gene	jgi.p\|Nanoce1779_2\|301238:2838..3858 +
jgi.p\|Nanoce1779_2\|301238	mRNA	jgi.p\|Nanoce1779_2\|301238:2838..3858 +
CDS_9046	CDS	CDS_9046:3163..3318 +
CDS_9046	CDS	CDS_9046:3458..3763 +
jgi.p\|Nanoce1779_2\|301562	gene	jgi.p\|Nanoce1779_2\|301562:20199..20964 -
jgi.p\|Nanoce1779_2\|301562	mRNA	jgi.p\|Nanoce1779_2\|301562:20199..20964 -
CDS_9055	CDS	CDS_9055:20678..20847 -
CDS_9055	CDS	CDS_9055:20280..20568 -
jgi.p\|Nanoce1779_2\|301596	gene	jgi.p\|Nanoce1779_2\|301596:25821..29377 -
jgi.p\|Nanoce1779_2\|301596	mRNA	jgi.p\|Nanoce1779_2\|301596:25821..29377 -
CDS_9058	CDS	CDS_9058:26036..29284 -
jgi.p\|Nanoce1779_2\|301684	gene	jgi.p\|Nanoce1779_2\|301684:41225..44438 -
jgi.p\|Nanoce1779_2\|301684	mRNA	jgi.p\|Nanoce1779_2\|301684:41225..44438 -
CDS_9065	CDS	CDS_9065:44178..44414 -
CDS_9065	CDS	CDS_9065:41333..44008 -
jgi.p\|Nanoce1779_2\|301891	gene	jgi.p\|Nanoce1779_2\|301891:57476..58748 +
jgi.p\|Nanoce1779_2\|301891	mRNA	jgi.p\|Nanoce1779_2\|301891:57476..58748 +
CDS_9072	CDS	CDS_9072:57694..57769 +
CDS_9072	CDS	CDS_9072:57964..58085 +
CDS_9072	CDS	CDS_9072:58294..58560 +
jgi.p\|Nanoce1779_2\|301951	gene	jgi.p\|Nanoce1779_2\|301951:50018..52350 +
jgi.p\|Nanoce1779_2\|301951	mRNA	jgi.p\|Nanoce1779_2\|301951:50018..52350 +
CDS_9068	CDS	CDS_9068:50610..50652 +
CDS_9068	CDS	CDS_9068:50760..52129 +
jgi.p\|Nanoce1779_2\|533574	gene	jgi.p\|Nanoce1779_2\|533574:87772..88944 -
jgi.p\|Nanoce1779_2\|533574	mRNA	jgi.p\|Nanoce1779_2\|533574:87772..88944 -
CDS_9085	CDS	CDS_9085:87772..88944 -
jgi.p\|Nanoce1779_2\|547201	gene	jgi.p\|Nanoce1779_2\|547201:44628..50035 -
jgi.p\|Nanoce1779_2\|547201	mRNA	jgi.p\|Nanoce1779_2\|547201:44628..50035 -
CDS_9067	CDS	CDS_9067:49150..49443 -
CDS_9067	CDS	CDS_9067:47829..49008 -
CDS_9067	CDS	CDS_9067:47089..47516 -
jgi.p\|Nanoce1779_2\|547211	gene	jgi.p\|Nanoce1779_2\|547211:63806..67802 +
jgi.p\|Nanoce1779_2\|547211	mRNA	jgi.p\|Nanoce1779_2\|547211:63806..67802 +
CDS_9076	CDS	CDS_9076:65027..65106 +
CDS_9076	CDS	CDS_9076:65305..65341 +
CDS_9076	CDS	CDS_9076:65454..65544 +
CDS_9076	CDS	CDS_9076:65676..66577 +
CDS_9076	CDS	CDS_9076:66743..67402 +
jgi.p\|Nanoce1779_2\|547218	gene	jgi.p\|Nanoce1779_2\|547218:69245..74954 +
jgi.p\|Nanoce1779_2\|547218	mRNA	jgi.p\|Nanoce1779_2\|547218:69245..74954 +
CDS_9078	CDS	CDS_9078:70163..70397 +
CDS_9078	CDS	CDS_9078:70549..70883 +
CDS_9078	CDS	CDS_9078:71049..71081 +
CDS_9078	CDS	CDS_9078:71211..71289 +
CDS_9078	CDS	CDS_9078:71439..71537 +
CDS_9078	CDS	CDS_9078:71681..71912 +
CDS_9078	CDS	CDS_9078:72043..72487 +
CDS_9078	CDS	CDS_9078:72767..72919 +
CDS_9078	CDS	CDS_9078:73180..73442 +
CDS_9078	CDS	CDS_9078:73702..74092 +
jgi.p\|Nanoce1779_2\|560447	gene	jgi.p\|Nanoce1779_2\|560447:9732..10676 -
jgi.p\|Nanoce1779_2\|560447	mRNA	jgi.p\|Nanoce1779_2\|560447:9732..10676 -
CDS_9049	CDS	CDS_9049:10541..10543 -
CDS_9049	CDS	CDS_9049:10267..10338 -
CDS_9049	CDS	CDS_9049:10078..10152 -
CDS_9049	CDS	CDS_9049:9732..9815 -
jgi.p\|Nanoce1779_2\|607884	gene	jgi.p\|Nanoce1779_2\|607884:723..2886 +
jgi.p\|Nanoce1779_2\|607884	mRNA	jgi.p\|Nanoce1779_2\|607884:723..2886 +
CDS_9045	CDS	CDS_9045:1116..1572 +
CDS_9045	CDS	CDS_9045:1667..2436 +
jgi.p\|Nanoce1779_2\|607911	gene	jgi.p\|Nanoce1779_2\|607911:13250..14573 +
jgi.p\|Nanoce1779_2\|607911	mRNA	jgi.p\|Nanoce1779_2\|607911:13250..14573 +
CDS_9051	CDS	CDS_9051:13579..13711 +
CDS_9051	CDS	CDS_9051:14008..14123 +
jgi.p\|Nanoce1779_2\|607926	gene	jgi.p\|Nanoce1779_2\|607926:15511..17399 +
jgi.p\|Nanoce1779_2\|607926	mRNA	jgi.p\|Nanoce1779_2\|607926:15511..17399 +
CDS_9052	CDS	CDS_9052:15638..16179 +
CDS_9052	CDS	CDS_9052:16343..17027 +
jgi.p\|Nanoce1779_2\|607928	gene	jgi.p\|Nanoce1779_2\|607928:17375..19000 -
jgi.p\|Nanoce1779_2\|607928	mRNA	jgi.p\|Nanoce1779_2\|607928:17375..19000 -
CDS_9053	CDS	CDS_9053:18031..18978 -
jgi.p\|Nanoce1779_2\|607932	gene	jgi.p\|Nanoce1779_2\|607932:19485..20893 -
jgi.p\|Nanoce1779_2\|607932	mRNA	jgi.p\|Nanoce1779_2\|607932:19485..20893 -
CDS_9054	CDS	CDS_9054:19617..20117 -
jgi.p\|Nanoce1779_2\|607941	gene	jgi.p\|Nanoce1779_2\|607941:23824..25811 +
jgi.p\|Nanoce1779_2\|607941	mRNA	jgi.p\|Nanoce1779_2\|607941:23824..25811 +
CDS_9057	CDS	CDS_9057:24311..25408 +
jgi.p\|Nanoce1779_2\|607955	gene	jgi.p\|Nanoce1779_2\|607955:30534..32379 -
jgi.p\|Nanoce1779_2\|607955	mRNA	jgi.p\|Nanoce1779_2\|607955:30534..32379 -
CDS_9060	CDS	CDS_9060:30947..32257 -
jgi.p\|Nanoce1779_2\|607977	gene	jgi.p\|Nanoce1779_2\|607977:36944..38655 -
jgi.p\|Nanoce1779_2\|607977	mRNA	jgi.p\|Nanoce1779_2\|607977:36944..38655 -
CDS_9063	CDS	CDS_9063:38556..38628 -
CDS_9063	CDS	CDS_9063:37922..38235 -
CDS_9063	CDS	CDS_9063:37089..37556 -
jgi.p\|Nanoce1779_2\|607981	gene	jgi.p\|Nanoce1779_2\|607981:38868..40513 +
jgi.p\|Nanoce1779_2\|607981	mRNA	jgi.p\|Nanoce1779_2\|607981:38868..40513 +
CDS_9064	CDS	CDS_9064:39082..39789 +
CDS_9064	CDS	CDS_9064:39909..40490 +
jgi.p\|Nanoce1779_2\|607989	gene	jgi.p\|Nanoce1779_2\|607989:45166..47844 +
jgi.p\|Nanoce1779_2\|607989	mRNA	jgi.p\|Nanoce1779_2\|607989:45166..47844 +
CDS_9066	CDS	CDS_9066:45182..46276 +
jgi.p\|Nanoce1779_2\|608003	gene	jgi.p\|Nanoce1779_2\|608003:51817..53551 -
jgi.p\|Nanoce1779_2\|608003	mRNA	jgi.p\|Nanoce1779_2\|608003:51817..53551 -
CDS_9069	CDS	CDS_9069:53350..53526 -
CDS_9069	CDS	CDS_9069:53111..53173 -
CDS_9069	CDS	CDS_9069:52734..52877 -
CDS_9069	CDS	CDS_9069:52376..52606 -
jgi.p\|Nanoce1779_2\|608007	gene	jgi.p\|Nanoce1779_2\|608007:54559..57104 -
jgi.p\|Nanoce1779_2\|608007	mRNA	jgi.p\|Nanoce1779_2\|608007:54559..57104 -
CDS_9070	CDS	CDS_9070:54861..57050 -
jgi.p\|Nanoce1779_2\|608010	gene	jgi.p\|Nanoce1779_2\|608010:57249..58026 +
jgi.p\|Nanoce1779_2\|608010	mRNA	jgi.p\|Nanoce1779_2\|608010:57249..58026 +
CDS_9071	CDS	CDS_9071:57270..57315 +
CDS_9071	CDS	CDS_9071:57432..57610 +
jgi.p\|Nanoce1779_2\|608018	gene	jgi.p\|Nanoce1779_2\|608018:59798..61245 -
jgi.p\|Nanoce1779_2\|608018	mRNA	jgi.p\|Nanoce1779_2\|608018:59798..61245 -
CDS_9074	CDS	CDS_9074:61034..61243 -
CDS_9074	CDS	CDS_9074:60898..60940 -
CDS_9074	CDS	CDS_9074:60289..60607 -
CDS_9074	CDS	CDS_9074:59907..60003 -
jgi.p\|Nanoce1779_2\|608020	gene	jgi.p\|Nanoce1779_2\|608020:61391..63006 -
jgi.p\|Nanoce1779_2\|608020	mRNA	jgi.p\|Nanoce1779_2\|608020:61391..63006 -
CDS_9075	CDS	CDS_9075:61599..62378 -
jgi.p\|Nanoce1779_2\|608026	gene	jgi.p\|Nanoce1779_2\|608026:67803..69125 -
jgi.p\|Nanoce1779_2\|608026	mRNA	jgi.p\|Nanoce1779_2\|608026:67803..69125 -
CDS_9077	CDS	CDS_9077:68406..69101 -
jgi.p\|Nanoce1779_2\|608036	gene	jgi.p\|Nanoce1779_2\|608036:74943..76038 -
jgi.p\|Nanoce1779_2\|608036	mRNA	jgi.p\|Nanoce1779_2\|608036:74943..76038 -
CDS_9079	CDS	CDS_9079:75678..76010 -
CDS_9079	CDS	CDS_9079:75050..75415 -
jgi.p\|Nanoce1779_2\|608037	gene	jgi.p\|Nanoce1779_2\|608037:76745..78413 +
jgi.p\|Nanoce1779_2\|608037	mRNA	jgi.p\|Nanoce1779_2\|608037:76745..78413 +
CDS_9080	CDS	CDS_9080:77040..78251 +
jgi.p\|Nanoce1779_2\|608039	gene	jgi.p\|Nanoce1779_2\|608039:78433..79678 -
jgi.p\|Nanoce1779_2\|608039	mRNA	jgi.p\|Nanoce1779_2\|608039:78433..79678 -
CDS_9081	CDS	CDS_9081:78479..79651 -
jgi.p\|Nanoce1779_2\|608041	gene	jgi.p\|Nanoce1779_2\|608041:80110..80650 +
jgi.p\|Nanoce1779_2\|608041	mRNA	jgi.p\|Nanoce1779_2\|608041:80110..80650 +
CDS_9082	CDS	CDS_9082:80145..80603 +
jgi.p\|Nanoce1779_2\|608047	gene	jgi.p\|Nanoce1779_2\|608047:85902..87578 +
jgi.p\|Nanoce1779_2\|608047	mRNA	jgi.p\|Nanoce1779_2\|608047:85902..87578 +
CDS_9084	CDS	CDS_9084:86204..86995 +
jgi.p\|Nanoce1779_2\|633646	gene	jgi.p\|Nanoce1779_2\|633646:6451..7866 +
jgi.p\|Nanoce1779_2\|633646	mRNA	jgi.p\|Nanoce1779_2\|633646:6451..7866 +
CDS_9048	CDS	CDS_9048:6516..6560 +
CDS_9048	CDS	CDS_9048:6673..7188 +
CDS_9048	CDS	CDS_9048:7517..7864 +
jgi.p\|Nanoce1779_2\|633651	gene	jgi.p\|Nanoce1779_2\|633651:21402..23748 +
jgi.p\|Nanoce1779_2\|633651	mRNA	jgi.p\|Nanoce1779_2\|633651:21402..23748 +
CDS_9056	CDS	CDS_9056:21545..22879 +
jgi.p\|Nanoce1779_2\|633663	gene	jgi.p\|Nanoce1779_2\|633663:58028..59822 +
jgi.p\|Nanoce1779_2\|633663	mRNA	jgi.p\|Nanoce1779_2\|633663:58028..59822 +
CDS_9073	CDS	CDS_9073:59057..59677 +
jgi.p\|Nanoce1779_2\|633673	gene	jgi.p\|Nanoce1779_2\|633673:83573..85145 +
jgi.p\|Nanoce1779_2\|633673	mRNA	jgi.p\|Nanoce1779_2\|633673:83573..85145 +
CDS_9083	CDS	CDS_9083:83600..84851 +
CDS_9083	CDS	CDS_9083:85078..85145 +
jgi.p\|Nanoce1779_2\|674263	gene	jgi.p\|Nanoce1779_2\|674263:3646..6260 -
jgi.p\|Nanoce1779_2\|674263	mRNA	jgi.p\|Nanoce1779_2\|674263:3646..6260 -
CDS_9047	CDS	CDS_9047:6212..6260 -
CDS_9047	CDS	CDS_9047:3953..5403 -
jgi.p\|Nanoce1779_2\|674271	gene	jgi.p\|Nanoce1779_2\|674271:29427..32378 +
jgi.p\|Nanoce1779_2\|674271	mRNA	jgi.p\|Nanoce1779_2\|674271:29427..32378 +
CDS_9059	CDS	CDS_9059:29471..29540 +
CDS_9059	CDS	CDS_9059:29715..29797 +
CDS_9059	CDS	CDS_9059:30094..30636 +
jgi.p\|Nanoce1779_2\|301238	polypeptide	jgi.p\|Nanoce1779_2\|301238:3163..3763 +
jgi.p\|Nanoce1779_2\|301562	polypeptide	jgi.p\|Nanoce1779_2\|301562:20280..20847 -
jgi.p\|Nanoce1779_2\|301596	polypeptide	jgi.p\|Nanoce1779_2\|301596:26036..29284 -
jgi.p\|Nanoce1779_2\|301684	polypeptide	jgi.p\|Nanoce1779_2\|301684:41333..44414 -
jgi.p\|Nanoce1779_2\|301891	polypeptide	jgi.p\|Nanoce1779_2\|301891:57694..58560 +
jgi.p\|Nanoce1779_2\|301951	polypeptide	jgi.p\|Nanoce1779_2\|301951:50610..52129 +
jgi.p\|Nanoce1779_2\|533574	polypeptide	jgi.p\|Nanoce1779_2\|533574:87772..88944 -
jgi.p\|Nanoce1779_2\|547201	polypeptide	jgi.p\|Nanoce1779_2\|547201:47089..49443 -
jgi.p\|Nanoce1779_2\|547211	polypeptide	jgi.p\|Nanoce1779_2\|547211:65027..67402 +
jgi.p\|Nanoce1779_2\|547218	polypeptide	jgi.p\|Nanoce1779_2\|547218:70163..74092 +
jgi.p\|Nanoce1779_2\|560447	polypeptide	jgi.p\|Nanoce1779_2\|560447:9732..10543 -
jgi.p\|Nanoce1779_2\|607884	polypeptide	jgi.p\|Nanoce1779_2\|607884:1116..2436 +
jgi.p\|Nanoce1779_2\|607911	polypeptide	jgi.p\|Nanoce1779_2\|607911:13579..14123 +
jgi.p\|Nanoce1779_2\|607926	polypeptide	jgi.p\|Nanoce1779_2\|607926:15638..17027 +
jgi.p\|Nanoce1779_2\|607928	polypeptide	jgi.p\|Nanoce1779_2\|607928:18031..18978 -
jgi.p\|Nanoce1779_2\|607932	polypeptide	jgi.p\|Nanoce1779_2\|607932:19617..20117 -
jgi.p\|Nanoce1779_2\|607941	polypeptide	jgi.p\|Nanoce1779_2\|607941:24311..25408 +
jgi.p\|Nanoce1779_2\|607955	polypeptide	jgi.p\|Nanoce1779_2\|607955:30947..32257 -
jgi.p\|Nanoce1779_2\|607977	polypeptide	jgi.p\|Nanoce1779_2\|607977:37089..38628 -
jgi.p\|Nanoce1779_2\|607981	polypeptide	jgi.p\|Nanoce1779_2\|607981:39082..40490 +
jgi.p\|Nanoce1779_2\|607989	polypeptide	jgi.p\|Nanoce1779_2\|607989:45182..46276 +
jgi.p\|Nanoce1779_2\|608003	polypeptide	jgi.p\|Nanoce1779_2\|608003:52376..53526 -
jgi.p\|Nanoce1779_2\|608007	polypeptide	jgi.p\|Nanoce1779_2\|608007:54861..57050 -
jgi.p\|Nanoce1779_2\|608010	polypeptide	jgi.p\|Nanoce1779_2\|608010:57270..57610 +
jgi.p\|Nanoce1779_2\|608018	polypeptide	jgi.p\|Nanoce1779_2\|608018:59907..61243 -
jgi.p\|Nanoce1779_2\|608020	polypeptide	jgi.p\|Nanoce1779_2\|608020:61599..62378 -
jgi.p\|Nanoce1779_2\|608026	polypeptide	jgi.p\|Nanoce1779_2\|608026:68406..69101 -
jgi.p\|Nanoce1779_2\|608036	polypeptide	jgi.p\|Nanoce1779_2\|608036:75050..76010 -
jgi.p\|Nanoce1779_2\|608037	polypeptide	jgi.p\|Nanoce1779_2\|608037:77040..78251 +
jgi.p\|Nanoce1779_2\|608039	polypeptide	jgi.p\|Nanoce1779_2\|608039:78479..79651 -
jgi.p\|Nanoce1779_2\|608041	polypeptide	jgi.p\|Nanoce1779_2\|608041:80145..80603 +
jgi.p\|Nanoce1779_2\|608047	polypeptide	jgi.p\|Nanoce1779_2\|608047:86204..86995 +
jgi.p\|Nanoce1779_2\|633646	polypeptide	jgi.p\|Nanoce1779_2\|633646:6516..7864 +
jgi.p\|Nanoce1779_2\|633651	polypeptide	jgi.p\|Nanoce1779_2\|633651:21545..22879 +
jgi.p\|Nanoce1779_2\|633663	polypeptide	jgi.p\|Nanoce1779_2\|633663:59057..59677 +
jgi.p\|Nanoce1779_2\|633673	polypeptide	jgi.p\|Nanoce1779_2\|633673:83600..85145 +
jgi.p\|Nanoce1779_2\|674263	polypeptide	jgi.p\|Nanoce1779_2\|674263:3953..6260 -
jgi.p\|Nanoce1779_2\|674271	polypeptide	jgi.p\|Nanoce1779_2\|674271:29471..30636 +
ncniL060	syntenic_region	ncniL060:724..88944 +

Analyses

This supercontig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gennome assembly for N. oceanica CCMP1779	2018-02-01

Annotated Terms

Homology

Relationships

Sequences

Synonyms

Publications