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Properties
| Property Name | Value |
|---|
| TranscriptId | 633749 |
| Track | FilteredModels2 |
| ProteinId | 633663 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_40 | supercontig | scaffold_40:58028..59822 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9073 ID=mRNA_9073|Name=jgi.p|Nanoce1779_2|633663|organism=Nannochloropsis oceanica|type=mRNA|length=1587bp
GGGGGAAGGGGAGGGCGAGCTCGTGAAGAAGCTCCAGGAGCGGTCGGCAA
AGAACTATGAGTCTAGCAAGAAGCAAAAGTTGATAAAATACAACCTCAAT
AACTTCAAGGACTACTTCGCGGTCAAGAACCAAAAGCTCGTGGTCAAGCC
TGACGGGAAATTCATCGCCATTGACAACAAAGTCTACAAGCAGCTAGAGA
AGGAGGGCAAAGTGGAAGGAAACTACTGGGTGTCGAAGGAGTCTCCACCG
GCAGATGGTACGGTTGACTTTATTCCGGCAGGAAGTAGGAATGACGGGCC
GACGCCTGACTTTTCGACGAACTAAGGAACATGGGGAGGATGAATTTTGG
CGTGCAAGGCAGTGAAGCAGTGTTGTTTCTGAGTTTCTAGCTTGGAATTA
GATAGCAACAAAAGAAATCAATATGAAGGGCGAATGAGAATGTGAAAAAT
AGGGTACGGAAATTGCTGCGACGTCTTCCTTGGTTTTCCTCTTCGCAGGT
ACAAGAGGCAGGAGGTTATGCACGGACTTCCACCAGTTTTCGTCCGTCTT
ACGAGAGCCAATACTTGATCATCTACATCGAAATTTCTGTAACTTGGATA
TAAGTCTCTACATTCAACAAATTTTCGGAATTTGCTTGACCTACACTGGG
TCTGTTGGAAGCAAGAAGAGAATAGTAACTGATATTTTGCCGTTGCCCTG
TTTATTTTGCGGGCGCTGTTACCAGAGATTTCATGCCTGCCTCACTGAAC
ATTCCCACCTCTTTCCCCCAAAATGTTGGATGTAACGTGTAGCACACCAT
TATCATCAGGTAAAATACCCCATGGCCTTTTTCGGGCTTACGGCCCTTGG
TCCCCAGGACCCGCTTGCAGTCTCCACAGACGCAGTCCAGCATTTGCATA
TTTTCACTGACACAGACTGGAAAGAGGCCTATGGCAGACAGCTCTACGAG
AACAATCAAGAACACAACAGGAAGAAGAGGTCGAAAATCGGCTGTGTCGC
AACCGCAGAAGCCTTGCCCTTGAAGTGTGTTTTCGCAACGATGGAGGACG
TTTACCACGGCTCTGTCCCACCTGCCGACCAGCGTCTCTTCGAAAGATGG
CTGAGGCCGCCTTCTCAAGAGGCCACCATCACTCTTACCGCCTTTCTCAC
TGCCGTTCAAGGTGCATGTACAGAGGCAGAAACCATGATAGCCAGCCGCA
GGTTTGACGCGGGTCCCTCGTGTGAGAGCCGGTCCTGGCAGGAATATTTC
AGCAACCTGCGCAAGTGCAAAGCCAGCGTTCGTGCCCCGTCGCAGAAGCA
GACAGTGCCCTTGACGGCCCAGCAGCAAATTGATTGGGAGACCCCTGCGT
TCGTTGCGGCGAGTGAACGCAAGGCCATCCGCAGCAGCGAGGAGACCAAG
TACGCCTCGGAAATGATCAAGGCAGGCCACTTCTTGTTCTGATTGAGATG
GTTTGAGGCTGAAAGCGAATGGTTCAGTTAGCAAGCGACGAAATGAAGGA
AGCGTAAATAGTAGACTTTTCGCCTTCCGGTGTGCACACAAGAAAATAAT
GGCGGCGTCGTCTAGGCAAGAAAATAATGGCATCGGC back to topprotein sequence of jgi.p|Nanoce1779_2|633663 >mRNA_9073-protein ID=mRNA_9073-protein|Name=jgi.p|Nanoce1779_2|633663|organism=Nannochloropsis oceanica|type=polypeptide|length=207bp
MAFFGLTALGPQDPLAVSTDAVQHLHIFTDTDWKEAYGRQLYENNQEHNR
KKRSKIGCVATAEALPLKCVFATMEDVYHGSVPPADQRLFERWLRPPSQE
ATITLTAFLTAVQGACTEAETMIASRRFDAGPSCESRSWQEYFSNLRKCK
ASVRAPSQKQTVPLTAQQQIDWETPAFVAASERKAIRSSEETKYASEMIK
AGHFLF* back to topmRNA from alignment at scaffold_40:58028..59822+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9073 ID=mRNA_9073|Name=jgi.p|Nanoce1779_2|633663|organism=Nannochloropsis oceanica|type=mRNA|length=1795bp|location=Sequence derived from alignment at scaffold_40:58028..59822+ (Nannochloropsis oceanica)
GGGGGAAGGGGAGGGCGAGCTCGTGAAGAAGCTCCAGGAGCGGTCGGCAA
AGAACTATGTATGTACAGAGCCGAGAGTAGTGATTGAAAATCAACGATCG
TCTGCTGCATATAAATGTTGTGGCTAGACGTATGCAGGTTTTTAATCTAC
ACGAATTCGGGGGGGGGGCTTGAATGACAAGTGTGAGACTGAGAGACGAC
AAGGTTGCATGGATTAGTATAATCACACGTTCCCTTCCTCCCTCCCTTCC
TACTGCTCAATTAAAGGAGTCTAGCAAGAAGCAAAAGTTGATAAAATACA
ACCTCAATAACTTCAAGGACTACTTCGCGGTCAAGAACCAAAAGCTCGTG
GTCAAGCCTGACGGGAAATTCATCGCCATTGACAACAAAGTCTACAAGCA
GCTAGAGAAGGAGGGCAAAGTGGAAGGAAACTACTGGGTGTCGAAGGAGT
CTCCACCGGCAGATGGTACGGTTGACTTTATTCCGGCAGGAAGTAGGAAT
GACGGGCCGACGCCTGACTTTTCGACGAACTAAGGAACATGGGGAGGATG
AATTTTGGCGTGCAAGGCAGTGAAGCAGTGTTGTTTCTGAGTTTCTAGCT
TGGAATTAGATAGCAACAAAAGAAATCAATATGAAGGGCGAATGAGAATG
TGAAAAATAGGGTACGGAAATTGCTGCGACGTCTTCCTTGGTTTTCCTCT
TCGCAGGTACAAGAGGCAGGAGGTTATGCACGGACTTCCACCAGTTTTCG
TCCGTCTTACGAGAGCCAATACTTGATCATCTACATCGAAATTTCTGTAA
CTTGGATATAAGTCTCTACATTCAACAAATTTTCGGAATTTGCTTGACCT
ACACTGGGTCTGTTGGAAGCAAGAAGAGAATAGTAACTGATATTTTGCCG
TTGCCCTGTTTATTTTGCGGGCGCTGTTACCAGAGATTTCATGCCTGCCT
CACTGAACATTCCCACCTCTTTCCCCCAAAATGTTGGATGTAACGTGTAG
CACACCATTATCATCAGGTAAAATACCCCATGGCCTTTTTCGGGCTTACG
GCCCTTGGTCCCCAGGACCCGCTTGCAGTCTCCACAGACGCAGTCCAGCA
TTTGCATATTTTCACTGACACAGACTGGAAAGAGGCCTATGGCAGACAGC
TCTACGAGAACAATCAAGAACACAACAGGAAGAAGAGGTCGAAAATCGGC
TGTGTCGCAACCGCAGAAGCCTTGCCCTTGAAGTGTGTTTTCGCAACGAT
GGAGGACGTTTACCACGGCTCTGTCCCACCTGCCGACCAGCGTCTCTTCG
AAAGATGGCTGAGGCCGCCTTCTCAAGAGGCCACCATCACTCTTACCGCC
TTTCTCACTGCCGTTCAAGGTGCATGTACAGAGGCAGAAACCATGATAGC
CAGCCGCAGGTTTGACGCGGGTCCCTCGTGTGAGAGCCGGTCCTGGCAGG
AATATTTCAGCAACCTGCGCAAGTGCAAAGCCAGCGTTCGTGCCCCGTCG
CAGAAGCAGACAGTGCCCTTGACGGCCCAGCAGCAAATTGATTGGGAGAC
CCCTGCGTTCGTTGCGGCGAGTGAACGCAAGGCCATCCGCAGCAGCGAGG
AGACCAAGTACGCCTCGGAAATGATCAAGGCAGGCCACTTCTTGTTCTGA
TTGAGATGGTTTGAGGCTGAAAGCGAATGGTTCAGTTAGCAAGCGACGAA
ATGAAGGAAGCGTAAATAGTAGACTTTTCGCCTTCCGGTGTGCACACAAG
AAAATAATGGCGGCGTCGTCTAGGCAAGAAAATAATGGCATCGGC back to topCoding sequence (CDS) from alignment at scaffold_40:58028..59822+ >mRNA_9073 ID=mRNA_9073|Name=jgi.p|Nanoce1779_2|633663|organism=Nannochloropsis oceanica|type=CDS|length=621bp|location=Sequence derived from alignment at scaffold_40:58028..59822+ (Nannochloropsis oceanica)
ATGGCCTTTTTCGGGCTTACGGCCCTTGGTCCCCAGGACCCGCTTGCAGT
CTCCACAGACGCAGTCCAGCATTTGCATATTTTCACTGACACAGACTGGA
AAGAGGCCTATGGCAGACAGCTCTACGAGAACAATCAAGAACACAACAGG
AAGAAGAGGTCGAAAATCGGCTGTGTCGCAACCGCAGAAGCCTTGCCCTT
GAAGTGTGTTTTCGCAACGATGGAGGACGTTTACCACGGCTCTGTCCCAC
CTGCCGACCAGCGTCTCTTCGAAAGATGGCTGAGGCCGCCTTCTCAAGAG
GCCACCATCACTCTTACCGCCTTTCTCACTGCCGTTCAAGGTGCATGTAC
AGAGGCAGAAACCATGATAGCCAGCCGCAGGTTTGACGCGGGTCCCTCGT
GTGAGAGCCGGTCCTGGCAGGAATATTTCAGCAACCTGCGCAAGTGCAAA
GCCAGCGTTCGTGCCCCGTCGCAGAAGCAGACAGTGCCCTTGACGGCCCA
GCAGCAAATTGATTGGGAGACCCCTGCGTTCGTTGCGGCGAGTGAACGCA
AGGCCATCCGCAGCAGCGAGGAGACCAAGTACGCCTCGGAAATGATCAAG
GCAGGCCACTTCTTGTTCTGA back to top
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