scaffold_56, scaffold_56 (supercontig) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	scaffold_56
Unique Name	scaffold_56
Type	supercontig
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	105354
Alignment location	jgi.p\|Nanoce1779_2\|352229:19534..20996 -
Alignment location	jgi.p\|Nanoce1779_2\|352229:19534..20996 -
Alignment location	CDS_10579:20832..20996 -
Alignment location	CDS_10579:20582..20708 -
Alignment location	CDS_10579:20202..20359 -
Alignment location	CDS_10579:19832..19999 -
Alignment location	jgi.p\|Nanoce1779_2\|352256:29007..30004 -
Alignment location	jgi.p\|Nanoce1779_2\|352256:29007..30004 -
Alignment location	CDS_10581:29224..29799 -
Alignment location	jgi.p\|Nanoce1779_2\|352785:71877..72972 -
Alignment location	jgi.p\|Nanoce1779_2\|352785:71877..72972 -
Alignment location	CDS_10593:72323..72934 -
Alignment location	CDS_10593:72036..72197 -
Alignment location	jgi.p\|Nanoce1779_2\|352822:81313..82361 -
Alignment location	jgi.p\|Nanoce1779_2\|352822:81313..82361 -
Alignment location	CDS_10597:81394..82224 -
Alignment location	jgi.p\|Nanoce1779_2\|352830:85922..86934 -
Alignment location	jgi.p\|Nanoce1779_2\|352830:85922..86934 -
Alignment location	CDS_10600:86120..86875 -
Alignment location	jgi.p\|Nanoce1779_2\|352955:101079..102791 +
Alignment location	jgi.p\|Nanoce1779_2\|352955:101079..102791 +
Alignment location	CDS_10604:101367..101913 +
Alignment location	CDS_10604:102096..102562 +
Alignment location	jgi.p\|Nanoce1779_2\|560933:10055..12761 -
Alignment location	jgi.p\|Nanoce1779_2\|560933:10055..12761 -
Alignment location	CDS_10576:11675..12736 -
Alignment location	jgi.p\|Nanoce1779_2\|560957:76985..79966 +
Alignment location	jgi.p\|Nanoce1779_2\|560957:76985..79966 +
Alignment location	CDS_10595:76997..77368 +
Alignment location	CDS_10595:77480..77920 +
Alignment location	CDS_10595:77972..78433 +
Alignment location	jgi.p\|Nanoce1779_2\|611376:4740..5819 +
Alignment location	jgi.p\|Nanoce1779_2\|611376:4740..5819 +
Alignment location	CDS_10574:4861..5224 +
Alignment location	CDS_10574:5362..5600 +
Alignment location	jgi.p\|Nanoce1779_2\|611387:14020..15942 +
Alignment location	jgi.p\|Nanoce1779_2\|611387:14020..15942 +
Alignment location	CDS_10577:14678..14740 +
Alignment location	CDS_10577:15154..15272 +
Alignment location	CDS_10577:15450..15553 +
Alignment location	CDS_10577:15693..15787 +
Alignment location	jgi.p\|Nanoce1779_2\|611403:24161..28917 -
Alignment location	jgi.p\|Nanoce1779_2\|611403:24161..28917 -
Alignment location	CDS_10580:27927..27993 -
Alignment location	CDS_10580:27466..27806 -
Alignment location	CDS_10580:27107..27283 -
Alignment location	CDS_10580:26787..26852 -
Alignment location	CDS_10580:26517..26651 -
Alignment location	CDS_10580:26236..26307 -
Alignment location	CDS_10580:25969..26149 -
Alignment location	CDS_10580:25668..25778 -
Alignment location	CDS_10580:25402..25467 -
Alignment location	CDS_10580:25173..25255 -
Alignment location	CDS_10580:24834..25008 -
Alignment location	CDS_10580:24516..24655 -
Alignment location	CDS_10580:24161..24367 -
Alignment location	jgi.p\|Nanoce1779_2\|611410:33742..36620 +
Alignment location	jgi.p\|Nanoce1779_2\|611410:33742..36620 +
Alignment location	CDS_10583:33963..36584 +
Alignment location	jgi.p\|Nanoce1779_2\|611412:37300..38920 +
Alignment location	jgi.p\|Nanoce1779_2\|611412:37300..38920 +
Alignment location	CDS_10584:37376..37984 +
Alignment location	jgi.p\|Nanoce1779_2\|611415:39271..44788 +
Alignment location	jgi.p\|Nanoce1779_2\|611415:39271..44788 +
Alignment location	CDS_10585:39687..40259 +
Alignment location	CDS_10585:40496..40660 +
Alignment location	CDS_10585:40920..40997 +
Alignment location	CDS_10585:41166..41289 +
Alignment location	CDS_10585:41466..41616 +
Alignment location	CDS_10585:41751..41856 +
Alignment location	CDS_10585:41994..42119 +
Alignment location	CDS_10585:42353..42440 +
Alignment location	CDS_10585:42545..42801 +
Alignment location	CDS_10585:43004..43137 +
Alignment location	CDS_10585:43290..43404 +
Alignment location	CDS_10585:43572..43709 +
Alignment location	CDS_10585:43850..43930 +
Alignment location	CDS_10585:44156..44380 +
Alignment location	jgi.p\|Nanoce1779_2\|611439:56074..59173 +
Alignment location	jgi.p\|Nanoce1779_2\|611439:56074..59173 +
Alignment location	CDS_10589:56184..56532 +
Alignment location	CDS_10589:56645..56766 +
Alignment location	CDS_10589:57043..57993 +
Alignment location	CDS_10589:58234..58500 +
Alignment location	jgi.p\|Nanoce1779_2\|611444:61761..62367 -
Alignment location	jgi.p\|Nanoce1779_2\|611444:61761..62367 -
Alignment location	CDS_10591:61970..62341 -
Alignment location	jgi.p\|Nanoce1779_2\|611449:63314..71748 -
Alignment location	jgi.p\|Nanoce1779_2\|611449:63314..71748 -
Alignment location	CDS_10592:71653..71717 -
Alignment location	CDS_10592:71383..71512 -
Alignment location	CDS_10592:71244..71280 -
Alignment location	CDS_10592:71052..71161 -
Alignment location	CDS_10592:70765..70884 -
Alignment location	CDS_10592:70566..70658 -
Alignment location	CDS_10592:70288..70341 -
Alignment location	CDS_10592:69956..70138 -
Alignment location	CDS_10592:69676..69794 -
Alignment location	CDS_10592:69398..69485 -
Alignment location	CDS_10592:69113..69217 -
Alignment location	CDS_10592:68814..68911 -
Alignment location	CDS_10592:68629..68689 -
Alignment location	CDS_10592:68350..68472 -
Alignment location	CDS_10592:67780..67878 -
Alignment location	CDS_10592:67569..67622 -
Alignment location	CDS_10592:67345..67426 -
Alignment location	CDS_10592:67041..67184 -
Alignment location	CDS_10592:66782..66864 -
Alignment location	CDS_10592:66506..66597 -
Alignment location	CDS_10592:66210..66325 -
Alignment location	CDS_10592:65499..65573 -
Alignment location	CDS_10592:64944..65017 -
Alignment location	CDS_10592:64683..64772 -
Alignment location	CDS_10592:64373..64468 -
Alignment location	CDS_10592:63787..63900 -
Alignment location	CDS_10592:63383..63631 -
Alignment location	jgi.p\|Nanoce1779_2\|611464:75283..76806 +
Alignment location	jgi.p\|Nanoce1779_2\|611464:75283..76806 +
Alignment location	CDS_10594:75295..76089 +
Alignment location	jgi.p\|Nanoce1779_2\|611468:78735..79967 +
Alignment location	jgi.p\|Nanoce1779_2\|611468:78735..79967 +
Alignment location	CDS_10596:78779..79447 +
Alignment location	jgi.p\|Nanoce1779_2\|611471:82401..83613 +
Alignment location	jgi.p\|Nanoce1779_2\|611471:82401..83613 +
Alignment location	CDS_10598:82760..83386 +
Alignment location	jgi.p\|Nanoce1779_2\|611473:85052..85760 -
Alignment location	jgi.p\|Nanoce1779_2\|611473:85052..85760 -
Alignment location	CDS_10599:85225..85704 -
Alignment location	jgi.p\|Nanoce1779_2\|611477:89609..91691 -
Alignment location	jgi.p\|Nanoce1779_2\|611477:89609..91691 -
Alignment location	CDS_10601:91438..91545 -
Alignment location	CDS_10601:90660..91265 -
Alignment location	CDS_10601:90182..90376 -
Alignment location	CDS_10601:90007..90147 -
Alignment location	jgi.p\|Nanoce1779_2\|611485:95232..98876 -
Alignment location	jgi.p\|Nanoce1779_2\|611485:95232..98876 -
Alignment location	CDS_10602:98683..98839 -
Alignment location	CDS_10602:98163..98387 -
Alignment location	CDS_10602:97877..98010 -
Alignment location	CDS_10602:97451..97681 -
Alignment location	CDS_10602:97091..97235 -
Alignment location	CDS_10602:96711..96930 -
Alignment location	CDS_10602:96358..96577 -
Alignment location	CDS_10602:95984..96172 -
Alignment location	jgi.p\|Nanoce1779_2\|611491:99202..100783 -
Alignment location	jgi.p\|Nanoce1779_2\|611491:99202..100783 -
Alignment location	CDS_10603:100423..100593 -
Alignment location	CDS_10603:100144..100348 -
Alignment location	CDS_10603:99457..99949 -
Alignment location	CDS_10603:99202..99280 -
Alignment location	jgi.p\|Nanoce1779_2\|626418:29395..32885 +
Alignment location	jgi.p\|Nanoce1779_2\|626418:29395..32885 +
Alignment location	CDS_10582:30610..30721 +
Alignment location	CDS_10582:30854..31078 +
Alignment location	CDS_10582:31255..32885 +
Alignment location	jgi.p\|Nanoce1779_2\|634112:53105..55280 +
Alignment location	jgi.p\|Nanoce1779_2\|634112:53105..55280 +
Alignment location	CDS_10588:53835..54288 +
Alignment location	CDS_10588:54393..55123 +
Alignment location	jgi.p\|Nanoce1779_2\|643319:46978..52633 -
Alignment location	jgi.p\|Nanoce1779_2\|643319:46978..52633 -
Alignment location	CDS_10587:50975..52633 -
Alignment location	CDS_10587:49868..50716 -
Alignment location	CDS_10587:49601..49724 -
Alignment location	CDS_10587:49334..49461 -
Alignment location	CDS_10587:49028..49107 -
Alignment location	CDS_10587:48851..48906 -
Alignment location	CDS_10587:48693..48763 -
Alignment location	CDS_10587:48462..48534 -
Alignment location	CDS_10587:46978..48068 -
Alignment location	jgi.p\|Nanoce1779_2\|643322:59415..61562 +
Alignment location	jgi.p\|Nanoce1779_2\|643322:59415..61562 +
Alignment location	CDS_10590:59415..61562 +
Alignment location	jgi.p\|Nanoce1779_2\|643332:103604..105154 -
Alignment location	jgi.p\|Nanoce1779_2\|643332:103604..105154 -
Alignment location	CDS_10605:104941..105154 -
Alignment location	CDS_10605:104608..104642 -
Alignment location	CDS_10605:104273..104392 -
Alignment location	CDS_10605:103799..104077 -
Alignment location	CDS_10605:103604..103645 -
Alignment location	jgi.p\|Nanoce1779_2\|674797:503..3629 -
Alignment location	jgi.p\|Nanoce1779_2\|674797:503..3629 -
Alignment location	CDS_10573:2975..3130 -
Alignment location	CDS_10573:2603..2820 -
Alignment location	CDS_10573:1953..2342 -
Alignment location	CDS_10573:1257..1822 -
Alignment location	CDS_10573:959..1107 -
Alignment location	CDS_10573:503..808 -
Alignment location	jgi.p\|Nanoce1779_2\|352229:19832..20996 -
Alignment location	jgi.p\|Nanoce1779_2\|352256:29224..29799 -
Alignment location	jgi.p\|Nanoce1779_2\|352785:72036..72934 -
Alignment location	jgi.p\|Nanoce1779_2\|352822:81394..82224 -
Alignment location	jgi.p\|Nanoce1779_2\|352830:86120..86875 -
Alignment location	jgi.p\|Nanoce1779_2\|352955:101367..102562 +
Alignment location	jgi.p\|Nanoce1779_2\|560933:11675..12736 -
Alignment location	jgi.p\|Nanoce1779_2\|560957:76997..78433 +
Alignment location	jgi.p\|Nanoce1779_2\|611376:4861..5600 +
Alignment location	jgi.p\|Nanoce1779_2\|611387:14678..15787 +
Alignment location	jgi.p\|Nanoce1779_2\|611403:24161..27993 -
Alignment location	jgi.p\|Nanoce1779_2\|611410:33963..36584 +
Alignment location	jgi.p\|Nanoce1779_2\|611412:37376..37984 +
Alignment location	jgi.p\|Nanoce1779_2\|611415:39687..44380 +
Alignment location	jgi.p\|Nanoce1779_2\|611439:56184..58500 +
Alignment location	jgi.p\|Nanoce1779_2\|611444:61970..62341 -
Alignment location	jgi.p\|Nanoce1779_2\|611449:63383..71717 -
Alignment location	jgi.p\|Nanoce1779_2\|611464:75295..76089 +
Alignment location	jgi.p\|Nanoce1779_2\|611468:78779..79447 +
Alignment location	jgi.p\|Nanoce1779_2\|611471:82760..83386 +
Alignment location	jgi.p\|Nanoce1779_2\|611473:85225..85704 -
Alignment location	jgi.p\|Nanoce1779_2\|611477:90007..91545 -
Alignment location	jgi.p\|Nanoce1779_2\|611485:95984..98839 -
Alignment location	jgi.p\|Nanoce1779_2\|611491:99202..100593 -
Alignment location	jgi.p\|Nanoce1779_2\|626418:30610..32885 +
Alignment location	jgi.p\|Nanoce1779_2\|634112:53835..55123 +
Alignment location	jgi.p\|Nanoce1779_2\|643319:46978..52633 -
Alignment location	jgi.p\|Nanoce1779_2\|643322:59415..61562 +
Alignment location	jgi.p\|Nanoce1779_2\|643332:103604..105154 -
Alignment location	jgi.p\|Nanoce1779_2\|674797:503..3130 -
Alignment location	ncniL078:504..105154 +

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Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
jgi.p\|Nanoce1779_2\|352229	gene	jgi.p\|Nanoce1779_2\|352229:19534..20996 -
jgi.p\|Nanoce1779_2\|352229	mRNA	jgi.p\|Nanoce1779_2\|352229:19534..20996 -
CDS_10579	CDS	CDS_10579:20832..20996 -
CDS_10579	CDS	CDS_10579:20582..20708 -
CDS_10579	CDS	CDS_10579:20202..20359 -
CDS_10579	CDS	CDS_10579:19832..19999 -
jgi.p\|Nanoce1779_2\|352256	gene	jgi.p\|Nanoce1779_2\|352256:29007..30004 -
jgi.p\|Nanoce1779_2\|352256	mRNA	jgi.p\|Nanoce1779_2\|352256:29007..30004 -
CDS_10581	CDS	CDS_10581:29224..29799 -
jgi.p\|Nanoce1779_2\|352785	gene	jgi.p\|Nanoce1779_2\|352785:71877..72972 -
jgi.p\|Nanoce1779_2\|352785	mRNA	jgi.p\|Nanoce1779_2\|352785:71877..72972 -
CDS_10593	CDS	CDS_10593:72323..72934 -
CDS_10593	CDS	CDS_10593:72036..72197 -
jgi.p\|Nanoce1779_2\|352822	gene	jgi.p\|Nanoce1779_2\|352822:81313..82361 -
jgi.p\|Nanoce1779_2\|352822	mRNA	jgi.p\|Nanoce1779_2\|352822:81313..82361 -
CDS_10597	CDS	CDS_10597:81394..82224 -
jgi.p\|Nanoce1779_2\|352830	gene	jgi.p\|Nanoce1779_2\|352830:85922..86934 -
jgi.p\|Nanoce1779_2\|352830	mRNA	jgi.p\|Nanoce1779_2\|352830:85922..86934 -
CDS_10600	CDS	CDS_10600:86120..86875 -
jgi.p\|Nanoce1779_2\|352955	gene	jgi.p\|Nanoce1779_2\|352955:101079..102791 +
jgi.p\|Nanoce1779_2\|352955	mRNA	jgi.p\|Nanoce1779_2\|352955:101079..102791 +
CDS_10604	CDS	CDS_10604:101367..101913 +
CDS_10604	CDS	CDS_10604:102096..102562 +
jgi.p\|Nanoce1779_2\|560933	gene	jgi.p\|Nanoce1779_2\|560933:10055..12761 -
jgi.p\|Nanoce1779_2\|560933	mRNA	jgi.p\|Nanoce1779_2\|560933:10055..12761 -
CDS_10576	CDS	CDS_10576:11675..12736 -
jgi.p\|Nanoce1779_2\|560957	gene	jgi.p\|Nanoce1779_2\|560957:76985..79966 +
jgi.p\|Nanoce1779_2\|560957	mRNA	jgi.p\|Nanoce1779_2\|560957:76985..79966 +
CDS_10595	CDS	CDS_10595:76997..77368 +
CDS_10595	CDS	CDS_10595:77480..77920 +
CDS_10595	CDS	CDS_10595:77972..78433 +
jgi.p\|Nanoce1779_2\|611376	gene	jgi.p\|Nanoce1779_2\|611376:4740..5819 +
jgi.p\|Nanoce1779_2\|611376	mRNA	jgi.p\|Nanoce1779_2\|611376:4740..5819 +
CDS_10574	CDS	CDS_10574:4861..5224 +
CDS_10574	CDS	CDS_10574:5362..5600 +
jgi.p\|Nanoce1779_2\|611387	gene	jgi.p\|Nanoce1779_2\|611387:14020..15942 +
jgi.p\|Nanoce1779_2\|611387	mRNA	jgi.p\|Nanoce1779_2\|611387:14020..15942 +
CDS_10577	CDS	CDS_10577:14678..14740 +
CDS_10577	CDS	CDS_10577:15154..15272 +
CDS_10577	CDS	CDS_10577:15450..15553 +
CDS_10577	CDS	CDS_10577:15693..15787 +
jgi.p\|Nanoce1779_2\|611403	gene	jgi.p\|Nanoce1779_2\|611403:24161..28917 -
jgi.p\|Nanoce1779_2\|611403	mRNA	jgi.p\|Nanoce1779_2\|611403:24161..28917 -
CDS_10580	CDS	CDS_10580:27927..27993 -
CDS_10580	CDS	CDS_10580:27466..27806 -
CDS_10580	CDS	CDS_10580:27107..27283 -
CDS_10580	CDS	CDS_10580:26787..26852 -
CDS_10580	CDS	CDS_10580:26517..26651 -
CDS_10580	CDS	CDS_10580:26236..26307 -
CDS_10580	CDS	CDS_10580:25969..26149 -
CDS_10580	CDS	CDS_10580:25668..25778 -
CDS_10580	CDS	CDS_10580:25402..25467 -
CDS_10580	CDS	CDS_10580:25173..25255 -
CDS_10580	CDS	CDS_10580:24834..25008 -
CDS_10580	CDS	CDS_10580:24516..24655 -
CDS_10580	CDS	CDS_10580:24161..24367 -
jgi.p\|Nanoce1779_2\|611410	gene	jgi.p\|Nanoce1779_2\|611410:33742..36620 +
jgi.p\|Nanoce1779_2\|611410	mRNA	jgi.p\|Nanoce1779_2\|611410:33742..36620 +
CDS_10583	CDS	CDS_10583:33963..36584 +
jgi.p\|Nanoce1779_2\|611412	gene	jgi.p\|Nanoce1779_2\|611412:37300..38920 +
jgi.p\|Nanoce1779_2\|611412	mRNA	jgi.p\|Nanoce1779_2\|611412:37300..38920 +
CDS_10584	CDS	CDS_10584:37376..37984 +
jgi.p\|Nanoce1779_2\|611415	gene	jgi.p\|Nanoce1779_2\|611415:39271..44788 +
jgi.p\|Nanoce1779_2\|611415	mRNA	jgi.p\|Nanoce1779_2\|611415:39271..44788 +
CDS_10585	CDS	CDS_10585:39687..40259 +
CDS_10585	CDS	CDS_10585:40496..40660 +
CDS_10585	CDS	CDS_10585:40920..40997 +
CDS_10585	CDS	CDS_10585:41166..41289 +
CDS_10585	CDS	CDS_10585:41466..41616 +
CDS_10585	CDS	CDS_10585:41751..41856 +
CDS_10585	CDS	CDS_10585:41994..42119 +
CDS_10585	CDS	CDS_10585:42353..42440 +
CDS_10585	CDS	CDS_10585:42545..42801 +
CDS_10585	CDS	CDS_10585:43004..43137 +
CDS_10585	CDS	CDS_10585:43290..43404 +
CDS_10585	CDS	CDS_10585:43572..43709 +
CDS_10585	CDS	CDS_10585:43850..43930 +
CDS_10585	CDS	CDS_10585:44156..44380 +
jgi.p\|Nanoce1779_2\|611439	gene	jgi.p\|Nanoce1779_2\|611439:56074..59173 +
jgi.p\|Nanoce1779_2\|611439	mRNA	jgi.p\|Nanoce1779_2\|611439:56074..59173 +
CDS_10589	CDS	CDS_10589:56184..56532 +
CDS_10589	CDS	CDS_10589:56645..56766 +
CDS_10589	CDS	CDS_10589:57043..57993 +
CDS_10589	CDS	CDS_10589:58234..58500 +
jgi.p\|Nanoce1779_2\|611444	gene	jgi.p\|Nanoce1779_2\|611444:61761..62367 -
jgi.p\|Nanoce1779_2\|611444	mRNA	jgi.p\|Nanoce1779_2\|611444:61761..62367 -
CDS_10591	CDS	CDS_10591:61970..62341 -
jgi.p\|Nanoce1779_2\|611449	gene	jgi.p\|Nanoce1779_2\|611449:63314..71748 -
jgi.p\|Nanoce1779_2\|611449	mRNA	jgi.p\|Nanoce1779_2\|611449:63314..71748 -
CDS_10592	CDS	CDS_10592:71653..71717 -
CDS_10592	CDS	CDS_10592:71383..71512 -
CDS_10592	CDS	CDS_10592:71244..71280 -
CDS_10592	CDS	CDS_10592:71052..71161 -
CDS_10592	CDS	CDS_10592:70765..70884 -
CDS_10592	CDS	CDS_10592:70566..70658 -
CDS_10592	CDS	CDS_10592:70288..70341 -
CDS_10592	CDS	CDS_10592:69956..70138 -
CDS_10592	CDS	CDS_10592:69676..69794 -
CDS_10592	CDS	CDS_10592:69398..69485 -
CDS_10592	CDS	CDS_10592:69113..69217 -
CDS_10592	CDS	CDS_10592:68814..68911 -
CDS_10592	CDS	CDS_10592:68629..68689 -
CDS_10592	CDS	CDS_10592:68350..68472 -
CDS_10592	CDS	CDS_10592:67780..67878 -
CDS_10592	CDS	CDS_10592:67569..67622 -
CDS_10592	CDS	CDS_10592:67345..67426 -
CDS_10592	CDS	CDS_10592:67041..67184 -
CDS_10592	CDS	CDS_10592:66782..66864 -
CDS_10592	CDS	CDS_10592:66506..66597 -
CDS_10592	CDS	CDS_10592:66210..66325 -
CDS_10592	CDS	CDS_10592:65499..65573 -
CDS_10592	CDS	CDS_10592:64944..65017 -
CDS_10592	CDS	CDS_10592:64683..64772 -
CDS_10592	CDS	CDS_10592:64373..64468 -
CDS_10592	CDS	CDS_10592:63787..63900 -
CDS_10592	CDS	CDS_10592:63383..63631 -
jgi.p\|Nanoce1779_2\|611464	gene	jgi.p\|Nanoce1779_2\|611464:75283..76806 +
jgi.p\|Nanoce1779_2\|611464	mRNA	jgi.p\|Nanoce1779_2\|611464:75283..76806 +
CDS_10594	CDS	CDS_10594:75295..76089 +
jgi.p\|Nanoce1779_2\|611468	gene	jgi.p\|Nanoce1779_2\|611468:78735..79967 +
jgi.p\|Nanoce1779_2\|611468	mRNA	jgi.p\|Nanoce1779_2\|611468:78735..79967 +
CDS_10596	CDS	CDS_10596:78779..79447 +
jgi.p\|Nanoce1779_2\|611471	gene	jgi.p\|Nanoce1779_2\|611471:82401..83613 +
jgi.p\|Nanoce1779_2\|611471	mRNA	jgi.p\|Nanoce1779_2\|611471:82401..83613 +
CDS_10598	CDS	CDS_10598:82760..83386 +
jgi.p\|Nanoce1779_2\|611473	gene	jgi.p\|Nanoce1779_2\|611473:85052..85760 -
jgi.p\|Nanoce1779_2\|611473	mRNA	jgi.p\|Nanoce1779_2\|611473:85052..85760 -
CDS_10599	CDS	CDS_10599:85225..85704 -
jgi.p\|Nanoce1779_2\|611477	gene	jgi.p\|Nanoce1779_2\|611477:89609..91691 -
jgi.p\|Nanoce1779_2\|611477	mRNA	jgi.p\|Nanoce1779_2\|611477:89609..91691 -
CDS_10601	CDS	CDS_10601:91438..91545 -
CDS_10601	CDS	CDS_10601:90660..91265 -
CDS_10601	CDS	CDS_10601:90182..90376 -
CDS_10601	CDS	CDS_10601:90007..90147 -
jgi.p\|Nanoce1779_2\|611485	gene	jgi.p\|Nanoce1779_2\|611485:95232..98876 -
jgi.p\|Nanoce1779_2\|611485	mRNA	jgi.p\|Nanoce1779_2\|611485:95232..98876 -
CDS_10602	CDS	CDS_10602:98683..98839 -
CDS_10602	CDS	CDS_10602:98163..98387 -
CDS_10602	CDS	CDS_10602:97877..98010 -
CDS_10602	CDS	CDS_10602:97451..97681 -
CDS_10602	CDS	CDS_10602:97091..97235 -
CDS_10602	CDS	CDS_10602:96711..96930 -
CDS_10602	CDS	CDS_10602:96358..96577 -
CDS_10602	CDS	CDS_10602:95984..96172 -
jgi.p\|Nanoce1779_2\|611491	gene	jgi.p\|Nanoce1779_2\|611491:99202..100783 -
jgi.p\|Nanoce1779_2\|611491	mRNA	jgi.p\|Nanoce1779_2\|611491:99202..100783 -
CDS_10603	CDS	CDS_10603:100423..100593 -
CDS_10603	CDS	CDS_10603:100144..100348 -
CDS_10603	CDS	CDS_10603:99457..99949 -
CDS_10603	CDS	CDS_10603:99202..99280 -
jgi.p\|Nanoce1779_2\|626418	gene	jgi.p\|Nanoce1779_2\|626418:29395..32885 +
jgi.p\|Nanoce1779_2\|626418	mRNA	jgi.p\|Nanoce1779_2\|626418:29395..32885 +
CDS_10582	CDS	CDS_10582:30610..30721 +
CDS_10582	CDS	CDS_10582:30854..31078 +
CDS_10582	CDS	CDS_10582:31255..32885 +
jgi.p\|Nanoce1779_2\|634112	gene	jgi.p\|Nanoce1779_2\|634112:53105..55280 +
jgi.p\|Nanoce1779_2\|634112	mRNA	jgi.p\|Nanoce1779_2\|634112:53105..55280 +
CDS_10588	CDS	CDS_10588:53835..54288 +
CDS_10588	CDS	CDS_10588:54393..55123 +
jgi.p\|Nanoce1779_2\|643319	gene	jgi.p\|Nanoce1779_2\|643319:46978..52633 -
jgi.p\|Nanoce1779_2\|643319	mRNA	jgi.p\|Nanoce1779_2\|643319:46978..52633 -
CDS_10587	CDS	CDS_10587:50975..52633 -
CDS_10587	CDS	CDS_10587:49868..50716 -
CDS_10587	CDS	CDS_10587:49601..49724 -
CDS_10587	CDS	CDS_10587:49334..49461 -
CDS_10587	CDS	CDS_10587:49028..49107 -
CDS_10587	CDS	CDS_10587:48851..48906 -
CDS_10587	CDS	CDS_10587:48693..48763 -
CDS_10587	CDS	CDS_10587:48462..48534 -
CDS_10587	CDS	CDS_10587:46978..48068 -
jgi.p\|Nanoce1779_2\|643322	gene	jgi.p\|Nanoce1779_2\|643322:59415..61562 +
jgi.p\|Nanoce1779_2\|643322	mRNA	jgi.p\|Nanoce1779_2\|643322:59415..61562 +
CDS_10590	CDS	CDS_10590:59415..61562 +
jgi.p\|Nanoce1779_2\|643332	gene	jgi.p\|Nanoce1779_2\|643332:103604..105154 -
jgi.p\|Nanoce1779_2\|643332	mRNA	jgi.p\|Nanoce1779_2\|643332:103604..105154 -
CDS_10605	CDS	CDS_10605:104941..105154 -
CDS_10605	CDS	CDS_10605:104608..104642 -
CDS_10605	CDS	CDS_10605:104273..104392 -
CDS_10605	CDS	CDS_10605:103799..104077 -
CDS_10605	CDS	CDS_10605:103604..103645 -
jgi.p\|Nanoce1779_2\|674797	gene	jgi.p\|Nanoce1779_2\|674797:503..3629 -
jgi.p\|Nanoce1779_2\|674797	mRNA	jgi.p\|Nanoce1779_2\|674797:503..3629 -
CDS_10573	CDS	CDS_10573:2975..3130 -
CDS_10573	CDS	CDS_10573:2603..2820 -
CDS_10573	CDS	CDS_10573:1953..2342 -
CDS_10573	CDS	CDS_10573:1257..1822 -
CDS_10573	CDS	CDS_10573:959..1107 -
CDS_10573	CDS	CDS_10573:503..808 -
jgi.p\|Nanoce1779_2\|352229	polypeptide	jgi.p\|Nanoce1779_2\|352229:19832..20996 -
jgi.p\|Nanoce1779_2\|352256	polypeptide	jgi.p\|Nanoce1779_2\|352256:29224..29799 -
jgi.p\|Nanoce1779_2\|352785	polypeptide	jgi.p\|Nanoce1779_2\|352785:72036..72934 -
jgi.p\|Nanoce1779_2\|352822	polypeptide	jgi.p\|Nanoce1779_2\|352822:81394..82224 -
jgi.p\|Nanoce1779_2\|352830	polypeptide	jgi.p\|Nanoce1779_2\|352830:86120..86875 -
jgi.p\|Nanoce1779_2\|352955	polypeptide	jgi.p\|Nanoce1779_2\|352955:101367..102562 +
jgi.p\|Nanoce1779_2\|560933	polypeptide	jgi.p\|Nanoce1779_2\|560933:11675..12736 -
jgi.p\|Nanoce1779_2\|560957	polypeptide	jgi.p\|Nanoce1779_2\|560957:76997..78433 +
jgi.p\|Nanoce1779_2\|611376	polypeptide	jgi.p\|Nanoce1779_2\|611376:4861..5600 +
jgi.p\|Nanoce1779_2\|611387	polypeptide	jgi.p\|Nanoce1779_2\|611387:14678..15787 +
jgi.p\|Nanoce1779_2\|611403	polypeptide	jgi.p\|Nanoce1779_2\|611403:24161..27993 -
jgi.p\|Nanoce1779_2\|611410	polypeptide	jgi.p\|Nanoce1779_2\|611410:33963..36584 +
jgi.p\|Nanoce1779_2\|611412	polypeptide	jgi.p\|Nanoce1779_2\|611412:37376..37984 +
jgi.p\|Nanoce1779_2\|611415	polypeptide	jgi.p\|Nanoce1779_2\|611415:39687..44380 +
jgi.p\|Nanoce1779_2\|611439	polypeptide	jgi.p\|Nanoce1779_2\|611439:56184..58500 +
jgi.p\|Nanoce1779_2\|611444	polypeptide	jgi.p\|Nanoce1779_2\|611444:61970..62341 -
jgi.p\|Nanoce1779_2\|611449	polypeptide	jgi.p\|Nanoce1779_2\|611449:63383..71717 -
jgi.p\|Nanoce1779_2\|611464	polypeptide	jgi.p\|Nanoce1779_2\|611464:75295..76089 +
jgi.p\|Nanoce1779_2\|611468	polypeptide	jgi.p\|Nanoce1779_2\|611468:78779..79447 +
jgi.p\|Nanoce1779_2\|611471	polypeptide	jgi.p\|Nanoce1779_2\|611471:82760..83386 +
jgi.p\|Nanoce1779_2\|611473	polypeptide	jgi.p\|Nanoce1779_2\|611473:85225..85704 -
jgi.p\|Nanoce1779_2\|611477	polypeptide	jgi.p\|Nanoce1779_2\|611477:90007..91545 -
jgi.p\|Nanoce1779_2\|611485	polypeptide	jgi.p\|Nanoce1779_2\|611485:95984..98839 -
jgi.p\|Nanoce1779_2\|611491	polypeptide	jgi.p\|Nanoce1779_2\|611491:99202..100593 -
jgi.p\|Nanoce1779_2\|626418	polypeptide	jgi.p\|Nanoce1779_2\|626418:30610..32885 +
jgi.p\|Nanoce1779_2\|634112	polypeptide	jgi.p\|Nanoce1779_2\|634112:53835..55123 +
jgi.p\|Nanoce1779_2\|643319	polypeptide	jgi.p\|Nanoce1779_2\|643319:46978..52633 -
jgi.p\|Nanoce1779_2\|643322	polypeptide	jgi.p\|Nanoce1779_2\|643322:59415..61562 +
jgi.p\|Nanoce1779_2\|643332	polypeptide	jgi.p\|Nanoce1779_2\|643332:103604..105154 -
jgi.p\|Nanoce1779_2\|674797	polypeptide	jgi.p\|Nanoce1779_2\|674797:503..3130 -
ncniL078	syntenic_region	ncniL078:504..105154 +

Analyses

This supercontig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gennome assembly for N. oceanica CCMP1779	2018-02-01

Annotated Terms

Homology

Relationships

Sequences

Synonyms

Publications