scaffold_54, scaffold_54 (supercontig) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	scaffold_54
Unique Name	scaffold_54
Type	supercontig
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	109140
Alignment location	jgi.p\|Nanoce1779_2\|348590:3845..6504 +
Alignment location	jgi.p\|Nanoce1779_2\|348590:3845..6504 +
Alignment location	CDS_10331:3970..4050 +
Alignment location	CDS_10331:4176..6347 +
Alignment location	jgi.p\|Nanoce1779_2\|348648:13615..15423 -
Alignment location	jgi.p\|Nanoce1779_2\|348648:13615..15423 -
Alignment location	CDS_10334:15103..15310 -
Alignment location	CDS_10334:14359..14888 -
Alignment location	CDS_10334:14004..14159 -
Alignment location	CDS_10334:13780..13911 -
Alignment location	jgi.p\|Nanoce1779_2\|348728:27816..30910 -
Alignment location	jgi.p\|Nanoce1779_2\|348728:27816..30910 -
Alignment location	CDS_10340:30571..30721 -
Alignment location	CDS_10340:30287..30402 -
Alignment location	CDS_10340:30012..30140 -
Alignment location	CDS_10340:29704..29850 -
Alignment location	CDS_10340:29252..29353 -
Alignment location	CDS_10340:28977..29108 -
Alignment location	CDS_10340:28667..28779 -
Alignment location	CDS_10340:28113..28509 -
Alignment location	jgi.p\|Nanoce1779_2\|348806:30884..33001 +
Alignment location	jgi.p\|Nanoce1779_2\|348806:30884..33001 +
Alignment location	CDS_10341:31173..31322 +
Alignment location	CDS_10341:31414..31503 +
Alignment location	CDS_10341:31688..31790 +
Alignment location	CDS_10341:31980..32235 +
Alignment location	CDS_10341:32305..32605 +
Alignment location	jgi.p\|Nanoce1779_2\|349160:71306..73306 -
Alignment location	jgi.p\|Nanoce1779_2\|349160:71306..73306 -
Alignment location	CDS_10352:73145..73201 -
Alignment location	CDS_10352:72982..73036 -
Alignment location	CDS_10352:72697..72830 -
Alignment location	CDS_10352:72401..72508 -
Alignment location	CDS_10352:72148..72273 -
Alignment location	CDS_10352:71443..71565 -
Alignment location	jgi.p\|Nanoce1779_2\|533958:87574..89446 -
Alignment location	jgi.p\|Nanoce1779_2\|533958:87574..89446 -
Alignment location	CDS_10359:89121..89446 -
Alignment location	CDS_10359:88809..88988 -
Alignment location	CDS_10359:88602..88660 -
Alignment location	CDS_10359:88334..88440 -
Alignment location	CDS_10359:88022..88149 -
Alignment location	CDS_10359:87574..87832 -
Alignment location	jgi.p\|Nanoce1779_2\|533979:54930..56072 -
Alignment location	jgi.p\|Nanoce1779_2\|533979:54930..56072 -
Alignment location	CDS_10348:55923..56072 -
Alignment location	CDS_10348:55611..55771 -
Alignment location	CDS_10348:55125..55449 -
Alignment location	CDS_10348:54930..55085 -
Alignment location	jgi.p\|Nanoce1779_2\|533980:95841..97191 -
Alignment location	jgi.p\|Nanoce1779_2\|533980:95841..97191 -
Alignment location	CDS_10362:97079..97191 -
Alignment location	CDS_10362:96702..96826 -
Alignment location	CDS_10362:95841..96652 -
Alignment location	jgi.p\|Nanoce1779_2\|547655:40016..42717 +
Alignment location	jgi.p\|Nanoce1779_2\|547655:40016..42717 +
Alignment location	CDS_10343:40294..41455 +
Alignment location	CDS_10343:41513..41816 +
Alignment location	CDS_10343:42007..42178 +
Alignment location	CDS_10343:42314..42508 +
Alignment location	jgi.p\|Nanoce1779_2\|560891:2159..3941 -
Alignment location	jgi.p\|Nanoce1779_2\|560891:2159..3941 -
Alignment location	CDS_10330:3615..3644 -
Alignment location	CDS_10330:2801..3514 -
Alignment location	CDS_10330:2159..2734 -
Alignment location	jgi.p\|Nanoce1779_2\|560915:66285..70159 -
Alignment location	jgi.p\|Nanoce1779_2\|560915:66285..70159 -
Alignment location	CDS_10351:69234..70159 -
Alignment location	CDS_10351:68983..69122 -
Alignment location	CDS_10351:68680..68922 -
Alignment location	CDS_10351:67082..68562 -
Alignment location	jgi.p\|Nanoce1779_2\|569805:80009..81937 +
Alignment location	jgi.p\|Nanoce1779_2\|569805:80009..81937 +
Alignment location	CDS_10355:80009..80104 +
Alignment location	CDS_10355:80331..80474 +
Alignment location	CDS_10355:80607..80756 +
Alignment location	CDS_10355:81017..81076 +
Alignment location	CDS_10355:81229..81294 +
Alignment location	CDS_10355:81590..81937 +
Alignment location	jgi.p\|Nanoce1779_2\|611080:20977..22262 +
Alignment location	jgi.p\|Nanoce1779_2\|611080:20977..22262 +
Alignment location	CDS_10337:22009..22262 +
Alignment location	jgi.p\|Nanoce1779_2\|611083:22627..24274 +
Alignment location	jgi.p\|Nanoce1779_2\|611083:22627..24274 +
Alignment location	CDS_10338:23175..24167 +
Alignment location	jgi.p\|Nanoce1779_2\|611084:24281..26946 -
Alignment location	jgi.p\|Nanoce1779_2\|611084:24281..26946 -
Alignment location	CDS_10339:24323..26902 -
Alignment location	jgi.p\|Nanoce1779_2\|611113:42719..45200 -
Alignment location	jgi.p\|Nanoce1779_2\|611113:42719..45200 -
Alignment location	CDS_10344:45024..45179 -
Alignment location	CDS_10344:44542..44746 -
Alignment location	CDS_10344:44026..44348 -
Alignment location	CDS_10344:43477..43620 -
Alignment location	CDS_10344:43069..43206 -
Alignment location	CDS_10344:42772..42894 -
Alignment location	jgi.p\|Nanoce1779_2\|611115:46005..47493 +
Alignment location	jgi.p\|Nanoce1779_2\|611115:46005..47493 +
Alignment location	CDS_10345:46162..47262 +
Alignment location	jgi.p\|Nanoce1779_2\|611116:47503..48943 -
Alignment location	jgi.p\|Nanoce1779_2\|611116:47503..48943 -
Alignment location	CDS_10346:47645..48889 -
Alignment location	jgi.p\|Nanoce1779_2\|611131:64195..66453 +
Alignment location	jgi.p\|Nanoce1779_2\|611131:64195..66453 +
Alignment location	CDS_10350:64402..64407 +
Alignment location	CDS_10350:64715..64813 +
Alignment location	CDS_10350:65038..65175 +
Alignment location	CDS_10350:65283..65420 +
Alignment location	CDS_10350:65563..65898 +
Alignment location	CDS_10350:66089..66349 +
Alignment location	jgi.p\|Nanoce1779_2\|611150:73715..76108 +
Alignment location	jgi.p\|Nanoce1779_2\|611150:73715..76108 +
Alignment location	CDS_10353:73797..73946 +
Alignment location	CDS_10353:74233..74303 +
Alignment location	CDS_10353:74526..74710 +
Alignment location	CDS_10353:74941..75100 +
Alignment location	CDS_10353:75231..75274 +
Alignment location	CDS_10353:75435..75605 +
Alignment location	CDS_10353:75755..76026 +
Alignment location	jgi.p\|Nanoce1779_2\|611154:76084..78277 -
Alignment location	jgi.p\|Nanoce1779_2\|611154:76084..78277 -
Alignment location	CDS_10354:78036..78250 -
Alignment location	CDS_10354:77461..77719 -
Alignment location	CDS_10354:76944..77211 -
Alignment location	CDS_10354:76544..76644 -
Alignment location	jgi.p\|Nanoce1779_2\|611169:82202..83593 -
Alignment location	jgi.p\|Nanoce1779_2\|611169:82202..83593 -
Alignment location	CDS_10356:82792..83308 -
Alignment location	CDS_10356:82327..82643 -
Alignment location	jgi.p\|Nanoce1779_2\|611177:85843..87571 +
Alignment location	jgi.p\|Nanoce1779_2\|611177:85843..87571 +
Alignment location	CDS_10358:86333..86462 +
Alignment location	CDS_10358:86688..87193 +
Alignment location	jgi.p\|Nanoce1779_2\|611190:91214..92076 +
Alignment location	jgi.p\|Nanoce1779_2\|611190:91214..92076 +
Alignment location	CDS_10360:91343..91428 +
Alignment location	CDS_10360:91561..91606 +
Alignment location	CDS_10360:91867..92025 +
Alignment location	jgi.p\|Nanoce1779_2\|611195:92888..93924 +
Alignment location	jgi.p\|Nanoce1779_2\|611195:92888..93924 +
Alignment location	CDS_10361:92922..92970 +
Alignment location	CDS_10361:93314..93492 +
Alignment location	CDS_10361:93625..93840 +
Alignment location	jgi.p\|Nanoce1779_2\|611207:103744..105016 -
Alignment location	jgi.p\|Nanoce1779_2\|611207:103744..105016 -
Alignment location	CDS_10363:104466..104596 -
Alignment location	CDS_10363:104238..104244 -
Alignment location	CDS_10363:103777..103992 -
Alignment location	jgi.p\|Nanoce1779_2\|611208:105094..106597 +
Alignment location	jgi.p\|Nanoce1779_2\|611208:105094..106597 +
Alignment location	CDS_10364:105113..105567 +
Alignment location	jgi.p\|Nanoce1779_2\|634055:9547..13147 +
Alignment location	jgi.p\|Nanoce1779_2\|634055:9547..13147 +
Alignment location	CDS_10333:9773..10213 +
Alignment location	CDS_10333:10238..13147 +
Alignment location	jgi.p\|Nanoce1779_2\|634061:33061..36172 -
Alignment location	jgi.p\|Nanoce1779_2\|634061:33061..36172 -
Alignment location	CDS_10342:35784..35843 -
Alignment location	CDS_10342:35451..35661 -
Alignment location	CDS_10342:35191..35299 -
Alignment location	CDS_10342:34972..35107 -
Alignment location	CDS_10342:34670..34791 -
Alignment location	CDS_10342:34303..34483 -
Alignment location	CDS_10342:33794..33934 -
Alignment location	CDS_10342:33519..33632 -
Alignment location	CDS_10342:33061..33237 -
Alignment location	jgi.p\|Nanoce1779_2\|643275:50882..54680 +
Alignment location	jgi.p\|Nanoce1779_2\|643275:50882..54680 +
Alignment location	CDS_10347:50882..50992 +
Alignment location	CDS_10347:51313..54534 +
Alignment location	CDS_10347:54669..54680 +
Alignment location	jgi.p\|Nanoce1779_2\|674746:14..2054 +
Alignment location	jgi.p\|Nanoce1779_2\|674746:14..2054 +
Alignment location	CDS_10329:14..23 +
Alignment location	CDS_10329:150..283 +
Alignment location	CDS_10329:498..1706 +
Alignment location	jgi.p\|Nanoce1779_2\|674749:6914..9325 -
Alignment location	jgi.p\|Nanoce1779_2\|674749:6914..9325 -
Alignment location	CDS_10332:9098..9325 -
Alignment location	CDS_10332:7803..8861 -
Alignment location	CDS_10332:7370..7694 -
Alignment location	CDS_10332:7185..7285 -
Alignment location	jgi.p\|Nanoce1779_2\|674752:15993..18132 +
Alignment location	jgi.p\|Nanoce1779_2\|674752:15993..18132 +
Alignment location	CDS_10335:15993..16003 +
Alignment location	CDS_10335:16320..17076 +
Alignment location	CDS_10335:17213..17893 +
Alignment location	jgi.p\|Nanoce1779_2\|674764:56542..63723 +
Alignment location	jgi.p\|Nanoce1779_2\|674764:56542..63723 +
Alignment location	CDS_10349:56728..57603 +
Alignment location	CDS_10349:57912..57967 +
Alignment location	CDS_10349:58223..58718 +
Alignment location	CDS_10349:58881..59315 +
Alignment location	CDS_10349:59514..59618 +
Alignment location	CDS_10349:59765..59869 +
Alignment location	CDS_10349:60021..60236 +
Alignment location	CDS_10349:60710..60931 +
Alignment location	CDS_10349:61201..61300 +
Alignment location	CDS_10349:61458..61570 +
Alignment location	CDS_10349:61828..61920 +
Alignment location	CDS_10349:62106..62207 +
Alignment location	CDS_10349:62344..62450 +
Alignment location	CDS_10349:62596..62695 +
Alignment location	CDS_10349:62920..63036 +
Alignment location	CDS_10349:63121..63270 +
Alignment location	CDS_10349:63371..63483 +
Alignment location	CDS_10349:63671..63722 +
Alignment location	jgi.p\|Nanoce1779_2\|674771:84496..85377 +
Alignment location	jgi.p\|Nanoce1779_2\|674771:84496..85377 +
Alignment location	CDS_10357:84946..85377 +
Alignment location	jgi.p\|Nanoce1779_2\|348590:3970..6347 +
Alignment location	jgi.p\|Nanoce1779_2\|348648:13780..15310 -
Alignment location	jgi.p\|Nanoce1779_2\|348728:28113..30721 -
Alignment location	jgi.p\|Nanoce1779_2\|348806:31173..32605 +
Alignment location	jgi.p\|Nanoce1779_2\|349160:71443..73201 -
Alignment location	jgi.p\|Nanoce1779_2\|533958:87574..89446 -
Alignment location	jgi.p\|Nanoce1779_2\|533979:54930..56072 -
Alignment location	jgi.p\|Nanoce1779_2\|533980:95841..97191 -
Alignment location	jgi.p\|Nanoce1779_2\|547655:40294..42508 +
Alignment location	jgi.p\|Nanoce1779_2\|560891:2159..3644 -
Alignment location	jgi.p\|Nanoce1779_2\|560915:67082..70159 -
Alignment location	jgi.p\|Nanoce1779_2\|569805:80009..81937 +
Alignment location	jgi.p\|Nanoce1779_2\|611080:22009..22262 +
Alignment location	jgi.p\|Nanoce1779_2\|611083:23175..24167 +
Alignment location	jgi.p\|Nanoce1779_2\|611084:24323..26902 -
Alignment location	jgi.p\|Nanoce1779_2\|611113:42772..45179 -
Alignment location	jgi.p\|Nanoce1779_2\|611115:46162..47262 +
Alignment location	jgi.p\|Nanoce1779_2\|611116:47645..48889 -
Alignment location	jgi.p\|Nanoce1779_2\|611131:64402..66349 +
Alignment location	jgi.p\|Nanoce1779_2\|611150:73797..76026 +
Alignment location	jgi.p\|Nanoce1779_2\|611154:76544..78250 -
Alignment location	jgi.p\|Nanoce1779_2\|611169:82327..83308 -
Alignment location	jgi.p\|Nanoce1779_2\|611177:86333..87193 +
Alignment location	jgi.p\|Nanoce1779_2\|611190:91343..92025 +
Alignment location	jgi.p\|Nanoce1779_2\|611195:92922..93840 +
Alignment location	jgi.p\|Nanoce1779_2\|611207:103777..104596 -
Alignment location	jgi.p\|Nanoce1779_2\|611208:105113..105567 +
Alignment location	jgi.p\|Nanoce1779_2\|634055:9773..13147 +
Alignment location	jgi.p\|Nanoce1779_2\|634061:33061..35843 -
Alignment location	jgi.p\|Nanoce1779_2\|643275:50882..54680 +
Alignment location	jgi.p\|Nanoce1779_2\|674746:14..1706 +
Alignment location	jgi.p\|Nanoce1779_2\|674749:7185..9325 -
Alignment location	jgi.p\|Nanoce1779_2\|674752:15993..17893 +
Alignment location	jgi.p\|Nanoce1779_2\|674764:56728..63722 +
Alignment location	jgi.p\|Nanoce1779_2\|674771:84946..85377 +
Alignment location	ncniL076:15..97191 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
jgi.p\|Nanoce1779_2\|348590	gene	jgi.p\|Nanoce1779_2\|348590:3845..6504 +
jgi.p\|Nanoce1779_2\|348590	mRNA	jgi.p\|Nanoce1779_2\|348590:3845..6504 +
CDS_10331	CDS	CDS_10331:3970..4050 +
CDS_10331	CDS	CDS_10331:4176..6347 +
jgi.p\|Nanoce1779_2\|348648	gene	jgi.p\|Nanoce1779_2\|348648:13615..15423 -
jgi.p\|Nanoce1779_2\|348648	mRNA	jgi.p\|Nanoce1779_2\|348648:13615..15423 -
CDS_10334	CDS	CDS_10334:15103..15310 -
CDS_10334	CDS	CDS_10334:14359..14888 -
CDS_10334	CDS	CDS_10334:14004..14159 -
CDS_10334	CDS	CDS_10334:13780..13911 -
jgi.p\|Nanoce1779_2\|348728	gene	jgi.p\|Nanoce1779_2\|348728:27816..30910 -
jgi.p\|Nanoce1779_2\|348728	mRNA	jgi.p\|Nanoce1779_2\|348728:27816..30910 -
CDS_10340	CDS	CDS_10340:30571..30721 -
CDS_10340	CDS	CDS_10340:30287..30402 -
CDS_10340	CDS	CDS_10340:30012..30140 -
CDS_10340	CDS	CDS_10340:29704..29850 -
CDS_10340	CDS	CDS_10340:29252..29353 -
CDS_10340	CDS	CDS_10340:28977..29108 -
CDS_10340	CDS	CDS_10340:28667..28779 -
CDS_10340	CDS	CDS_10340:28113..28509 -
jgi.p\|Nanoce1779_2\|348806	gene	jgi.p\|Nanoce1779_2\|348806:30884..33001 +
jgi.p\|Nanoce1779_2\|348806	mRNA	jgi.p\|Nanoce1779_2\|348806:30884..33001 +
CDS_10341	CDS	CDS_10341:31173..31322 +
CDS_10341	CDS	CDS_10341:31414..31503 +
CDS_10341	CDS	CDS_10341:31688..31790 +
CDS_10341	CDS	CDS_10341:31980..32235 +
CDS_10341	CDS	CDS_10341:32305..32605 +
jgi.p\|Nanoce1779_2\|349160	gene	jgi.p\|Nanoce1779_2\|349160:71306..73306 -
jgi.p\|Nanoce1779_2\|349160	mRNA	jgi.p\|Nanoce1779_2\|349160:71306..73306 -
CDS_10352	CDS	CDS_10352:73145..73201 -
CDS_10352	CDS	CDS_10352:72982..73036 -
CDS_10352	CDS	CDS_10352:72697..72830 -
CDS_10352	CDS	CDS_10352:72401..72508 -
CDS_10352	CDS	CDS_10352:72148..72273 -
CDS_10352	CDS	CDS_10352:71443..71565 -
jgi.p\|Nanoce1779_2\|533958	gene	jgi.p\|Nanoce1779_2\|533958:87574..89446 -
jgi.p\|Nanoce1779_2\|533958	mRNA	jgi.p\|Nanoce1779_2\|533958:87574..89446 -
CDS_10359	CDS	CDS_10359:89121..89446 -
CDS_10359	CDS	CDS_10359:88809..88988 -
CDS_10359	CDS	CDS_10359:88602..88660 -
CDS_10359	CDS	CDS_10359:88334..88440 -
CDS_10359	CDS	CDS_10359:88022..88149 -
CDS_10359	CDS	CDS_10359:87574..87832 -
jgi.p\|Nanoce1779_2\|533979	gene	jgi.p\|Nanoce1779_2\|533979:54930..56072 -
jgi.p\|Nanoce1779_2\|533979	mRNA	jgi.p\|Nanoce1779_2\|533979:54930..56072 -
CDS_10348	CDS	CDS_10348:55923..56072 -
CDS_10348	CDS	CDS_10348:55611..55771 -
CDS_10348	CDS	CDS_10348:55125..55449 -
CDS_10348	CDS	CDS_10348:54930..55085 -
jgi.p\|Nanoce1779_2\|533980	gene	jgi.p\|Nanoce1779_2\|533980:95841..97191 -
jgi.p\|Nanoce1779_2\|533980	mRNA	jgi.p\|Nanoce1779_2\|533980:95841..97191 -
CDS_10362	CDS	CDS_10362:97079..97191 -
CDS_10362	CDS	CDS_10362:96702..96826 -
CDS_10362	CDS	CDS_10362:95841..96652 -
jgi.p\|Nanoce1779_2\|547655	gene	jgi.p\|Nanoce1779_2\|547655:40016..42717 +
jgi.p\|Nanoce1779_2\|547655	mRNA	jgi.p\|Nanoce1779_2\|547655:40016..42717 +
CDS_10343	CDS	CDS_10343:40294..41455 +
CDS_10343	CDS	CDS_10343:41513..41816 +
CDS_10343	CDS	CDS_10343:42007..42178 +
CDS_10343	CDS	CDS_10343:42314..42508 +
jgi.p\|Nanoce1779_2\|560891	gene	jgi.p\|Nanoce1779_2\|560891:2159..3941 -
jgi.p\|Nanoce1779_2\|560891	mRNA	jgi.p\|Nanoce1779_2\|560891:2159..3941 -
CDS_10330	CDS	CDS_10330:3615..3644 -
CDS_10330	CDS	CDS_10330:2801..3514 -
CDS_10330	CDS	CDS_10330:2159..2734 -
jgi.p\|Nanoce1779_2\|560915	gene	jgi.p\|Nanoce1779_2\|560915:66285..70159 -
jgi.p\|Nanoce1779_2\|560915	mRNA	jgi.p\|Nanoce1779_2\|560915:66285..70159 -
CDS_10351	CDS	CDS_10351:69234..70159 -
CDS_10351	CDS	CDS_10351:68983..69122 -
CDS_10351	CDS	CDS_10351:68680..68922 -
CDS_10351	CDS	CDS_10351:67082..68562 -
jgi.p\|Nanoce1779_2\|569805	gene	jgi.p\|Nanoce1779_2\|569805:80009..81937 +
jgi.p\|Nanoce1779_2\|569805	mRNA	jgi.p\|Nanoce1779_2\|569805:80009..81937 +
CDS_10355	CDS	CDS_10355:80009..80104 +
CDS_10355	CDS	CDS_10355:80331..80474 +
CDS_10355	CDS	CDS_10355:80607..80756 +
CDS_10355	CDS	CDS_10355:81017..81076 +
CDS_10355	CDS	CDS_10355:81229..81294 +
CDS_10355	CDS	CDS_10355:81590..81937 +
jgi.p\|Nanoce1779_2\|611080	gene	jgi.p\|Nanoce1779_2\|611080:20977..22262 +
jgi.p\|Nanoce1779_2\|611080	mRNA	jgi.p\|Nanoce1779_2\|611080:20977..22262 +
CDS_10337	CDS	CDS_10337:22009..22262 +
jgi.p\|Nanoce1779_2\|611083	gene	jgi.p\|Nanoce1779_2\|611083:22627..24274 +
jgi.p\|Nanoce1779_2\|611083	mRNA	jgi.p\|Nanoce1779_2\|611083:22627..24274 +
CDS_10338	CDS	CDS_10338:23175..24167 +
jgi.p\|Nanoce1779_2\|611084	gene	jgi.p\|Nanoce1779_2\|611084:24281..26946 -
jgi.p\|Nanoce1779_2\|611084	mRNA	jgi.p\|Nanoce1779_2\|611084:24281..26946 -
CDS_10339	CDS	CDS_10339:24323..26902 -
jgi.p\|Nanoce1779_2\|611113	gene	jgi.p\|Nanoce1779_2\|611113:42719..45200 -
jgi.p\|Nanoce1779_2\|611113	mRNA	jgi.p\|Nanoce1779_2\|611113:42719..45200 -
CDS_10344	CDS	CDS_10344:45024..45179 -
CDS_10344	CDS	CDS_10344:44542..44746 -
CDS_10344	CDS	CDS_10344:44026..44348 -
CDS_10344	CDS	CDS_10344:43477..43620 -
CDS_10344	CDS	CDS_10344:43069..43206 -
CDS_10344	CDS	CDS_10344:42772..42894 -
jgi.p\|Nanoce1779_2\|611115	gene	jgi.p\|Nanoce1779_2\|611115:46005..47493 +
jgi.p\|Nanoce1779_2\|611115	mRNA	jgi.p\|Nanoce1779_2\|611115:46005..47493 +
CDS_10345	CDS	CDS_10345:46162..47262 +
jgi.p\|Nanoce1779_2\|611116	gene	jgi.p\|Nanoce1779_2\|611116:47503..48943 -
jgi.p\|Nanoce1779_2\|611116	mRNA	jgi.p\|Nanoce1779_2\|611116:47503..48943 -
CDS_10346	CDS	CDS_10346:47645..48889 -
jgi.p\|Nanoce1779_2\|611131	gene	jgi.p\|Nanoce1779_2\|611131:64195..66453 +
jgi.p\|Nanoce1779_2\|611131	mRNA	jgi.p\|Nanoce1779_2\|611131:64195..66453 +
CDS_10350	CDS	CDS_10350:64402..64407 +
CDS_10350	CDS	CDS_10350:64715..64813 +
CDS_10350	CDS	CDS_10350:65038..65175 +
CDS_10350	CDS	CDS_10350:65283..65420 +
CDS_10350	CDS	CDS_10350:65563..65898 +
CDS_10350	CDS	CDS_10350:66089..66349 +
jgi.p\|Nanoce1779_2\|611150	gene	jgi.p\|Nanoce1779_2\|611150:73715..76108 +
jgi.p\|Nanoce1779_2\|611150	mRNA	jgi.p\|Nanoce1779_2\|611150:73715..76108 +
CDS_10353	CDS	CDS_10353:73797..73946 +
CDS_10353	CDS	CDS_10353:74233..74303 +
CDS_10353	CDS	CDS_10353:74526..74710 +
CDS_10353	CDS	CDS_10353:74941..75100 +
CDS_10353	CDS	CDS_10353:75231..75274 +
CDS_10353	CDS	CDS_10353:75435..75605 +
CDS_10353	CDS	CDS_10353:75755..76026 +
jgi.p\|Nanoce1779_2\|611154	gene	jgi.p\|Nanoce1779_2\|611154:76084..78277 -
jgi.p\|Nanoce1779_2\|611154	mRNA	jgi.p\|Nanoce1779_2\|611154:76084..78277 -
CDS_10354	CDS	CDS_10354:78036..78250 -
CDS_10354	CDS	CDS_10354:77461..77719 -
CDS_10354	CDS	CDS_10354:76944..77211 -
CDS_10354	CDS	CDS_10354:76544..76644 -
jgi.p\|Nanoce1779_2\|611169	gene	jgi.p\|Nanoce1779_2\|611169:82202..83593 -
jgi.p\|Nanoce1779_2\|611169	mRNA	jgi.p\|Nanoce1779_2\|611169:82202..83593 -
CDS_10356	CDS	CDS_10356:82792..83308 -
CDS_10356	CDS	CDS_10356:82327..82643 -
jgi.p\|Nanoce1779_2\|611177	gene	jgi.p\|Nanoce1779_2\|611177:85843..87571 +
jgi.p\|Nanoce1779_2\|611177	mRNA	jgi.p\|Nanoce1779_2\|611177:85843..87571 +
CDS_10358	CDS	CDS_10358:86333..86462 +
CDS_10358	CDS	CDS_10358:86688..87193 +
jgi.p\|Nanoce1779_2\|611190	gene	jgi.p\|Nanoce1779_2\|611190:91214..92076 +
jgi.p\|Nanoce1779_2\|611190	mRNA	jgi.p\|Nanoce1779_2\|611190:91214..92076 +
CDS_10360	CDS	CDS_10360:91343..91428 +
CDS_10360	CDS	CDS_10360:91561..91606 +
CDS_10360	CDS	CDS_10360:91867..92025 +
jgi.p\|Nanoce1779_2\|611195	gene	jgi.p\|Nanoce1779_2\|611195:92888..93924 +
jgi.p\|Nanoce1779_2\|611195	mRNA	jgi.p\|Nanoce1779_2\|611195:92888..93924 +
CDS_10361	CDS	CDS_10361:92922..92970 +
CDS_10361	CDS	CDS_10361:93314..93492 +
CDS_10361	CDS	CDS_10361:93625..93840 +
jgi.p\|Nanoce1779_2\|611207	gene	jgi.p\|Nanoce1779_2\|611207:103744..105016 -
jgi.p\|Nanoce1779_2\|611207	mRNA	jgi.p\|Nanoce1779_2\|611207:103744..105016 -
CDS_10363	CDS	CDS_10363:104466..104596 -
CDS_10363	CDS	CDS_10363:104238..104244 -
CDS_10363	CDS	CDS_10363:103777..103992 -
jgi.p\|Nanoce1779_2\|611208	gene	jgi.p\|Nanoce1779_2\|611208:105094..106597 +
jgi.p\|Nanoce1779_2\|611208	mRNA	jgi.p\|Nanoce1779_2\|611208:105094..106597 +
CDS_10364	CDS	CDS_10364:105113..105567 +
jgi.p\|Nanoce1779_2\|634055	gene	jgi.p\|Nanoce1779_2\|634055:9547..13147 +
jgi.p\|Nanoce1779_2\|634055	mRNA	jgi.p\|Nanoce1779_2\|634055:9547..13147 +
CDS_10333	CDS	CDS_10333:9773..10213 +
CDS_10333	CDS	CDS_10333:10238..13147 +
jgi.p\|Nanoce1779_2\|634061	gene	jgi.p\|Nanoce1779_2\|634061:33061..36172 -
jgi.p\|Nanoce1779_2\|634061	mRNA	jgi.p\|Nanoce1779_2\|634061:33061..36172 -
CDS_10342	CDS	CDS_10342:35784..35843 -
CDS_10342	CDS	CDS_10342:35451..35661 -
CDS_10342	CDS	CDS_10342:35191..35299 -
CDS_10342	CDS	CDS_10342:34972..35107 -
CDS_10342	CDS	CDS_10342:34670..34791 -
CDS_10342	CDS	CDS_10342:34303..34483 -
CDS_10342	CDS	CDS_10342:33794..33934 -
CDS_10342	CDS	CDS_10342:33519..33632 -
CDS_10342	CDS	CDS_10342:33061..33237 -
jgi.p\|Nanoce1779_2\|643275	gene	jgi.p\|Nanoce1779_2\|643275:50882..54680 +
jgi.p\|Nanoce1779_2\|643275	mRNA	jgi.p\|Nanoce1779_2\|643275:50882..54680 +
CDS_10347	CDS	CDS_10347:50882..50992 +
CDS_10347	CDS	CDS_10347:51313..54534 +
CDS_10347	CDS	CDS_10347:54669..54680 +
jgi.p\|Nanoce1779_2\|674746	gene	jgi.p\|Nanoce1779_2\|674746:14..2054 +
jgi.p\|Nanoce1779_2\|674746	mRNA	jgi.p\|Nanoce1779_2\|674746:14..2054 +
CDS_10329	CDS	CDS_10329:14..23 +
CDS_10329	CDS	CDS_10329:150..283 +
CDS_10329	CDS	CDS_10329:498..1706 +
jgi.p\|Nanoce1779_2\|674749	gene	jgi.p\|Nanoce1779_2\|674749:6914..9325 -
jgi.p\|Nanoce1779_2\|674749	mRNA	jgi.p\|Nanoce1779_2\|674749:6914..9325 -
CDS_10332	CDS	CDS_10332:9098..9325 -
CDS_10332	CDS	CDS_10332:7803..8861 -
CDS_10332	CDS	CDS_10332:7370..7694 -
CDS_10332	CDS	CDS_10332:7185..7285 -
jgi.p\|Nanoce1779_2\|674752	gene	jgi.p\|Nanoce1779_2\|674752:15993..18132 +
jgi.p\|Nanoce1779_2\|674752	mRNA	jgi.p\|Nanoce1779_2\|674752:15993..18132 +
CDS_10335	CDS	CDS_10335:15993..16003 +
CDS_10335	CDS	CDS_10335:16320..17076 +
CDS_10335	CDS	CDS_10335:17213..17893 +
jgi.p\|Nanoce1779_2\|674764	gene	jgi.p\|Nanoce1779_2\|674764:56542..63723 +
jgi.p\|Nanoce1779_2\|674764	mRNA	jgi.p\|Nanoce1779_2\|674764:56542..63723 +
CDS_10349	CDS	CDS_10349:56728..57603 +
CDS_10349	CDS	CDS_10349:57912..57967 +
CDS_10349	CDS	CDS_10349:58223..58718 +
CDS_10349	CDS	CDS_10349:58881..59315 +
CDS_10349	CDS	CDS_10349:59514..59618 +
CDS_10349	CDS	CDS_10349:59765..59869 +
CDS_10349	CDS	CDS_10349:60021..60236 +
CDS_10349	CDS	CDS_10349:60710..60931 +
CDS_10349	CDS	CDS_10349:61201..61300 +
CDS_10349	CDS	CDS_10349:61458..61570 +
CDS_10349	CDS	CDS_10349:61828..61920 +
CDS_10349	CDS	CDS_10349:62106..62207 +
CDS_10349	CDS	CDS_10349:62344..62450 +
CDS_10349	CDS	CDS_10349:62596..62695 +
CDS_10349	CDS	CDS_10349:62920..63036 +
CDS_10349	CDS	CDS_10349:63121..63270 +
CDS_10349	CDS	CDS_10349:63371..63483 +
CDS_10349	CDS	CDS_10349:63671..63722 +
jgi.p\|Nanoce1779_2\|674771	gene	jgi.p\|Nanoce1779_2\|674771:84496..85377 +
jgi.p\|Nanoce1779_2\|674771	mRNA	jgi.p\|Nanoce1779_2\|674771:84496..85377 +
CDS_10357	CDS	CDS_10357:84946..85377 +
jgi.p\|Nanoce1779_2\|348590	polypeptide	jgi.p\|Nanoce1779_2\|348590:3970..6347 +
jgi.p\|Nanoce1779_2\|348648	polypeptide	jgi.p\|Nanoce1779_2\|348648:13780..15310 -
jgi.p\|Nanoce1779_2\|348728	polypeptide	jgi.p\|Nanoce1779_2\|348728:28113..30721 -
jgi.p\|Nanoce1779_2\|348806	polypeptide	jgi.p\|Nanoce1779_2\|348806:31173..32605 +
jgi.p\|Nanoce1779_2\|349160	polypeptide	jgi.p\|Nanoce1779_2\|349160:71443..73201 -
jgi.p\|Nanoce1779_2\|533958	polypeptide	jgi.p\|Nanoce1779_2\|533958:87574..89446 -
jgi.p\|Nanoce1779_2\|533979	polypeptide	jgi.p\|Nanoce1779_2\|533979:54930..56072 -
jgi.p\|Nanoce1779_2\|533980	polypeptide	jgi.p\|Nanoce1779_2\|533980:95841..97191 -
jgi.p\|Nanoce1779_2\|547655	polypeptide	jgi.p\|Nanoce1779_2\|547655:40294..42508 +
jgi.p\|Nanoce1779_2\|560891	polypeptide	jgi.p\|Nanoce1779_2\|560891:2159..3644 -
jgi.p\|Nanoce1779_2\|560915	polypeptide	jgi.p\|Nanoce1779_2\|560915:67082..70159 -
jgi.p\|Nanoce1779_2\|569805	polypeptide	jgi.p\|Nanoce1779_2\|569805:80009..81937 +
jgi.p\|Nanoce1779_2\|611080	polypeptide	jgi.p\|Nanoce1779_2\|611080:22009..22262 +
jgi.p\|Nanoce1779_2\|611083	polypeptide	jgi.p\|Nanoce1779_2\|611083:23175..24167 +
jgi.p\|Nanoce1779_2\|611084	polypeptide	jgi.p\|Nanoce1779_2\|611084:24323..26902 -
jgi.p\|Nanoce1779_2\|611113	polypeptide	jgi.p\|Nanoce1779_2\|611113:42772..45179 -
jgi.p\|Nanoce1779_2\|611115	polypeptide	jgi.p\|Nanoce1779_2\|611115:46162..47262 +
jgi.p\|Nanoce1779_2\|611116	polypeptide	jgi.p\|Nanoce1779_2\|611116:47645..48889 -
jgi.p\|Nanoce1779_2\|611131	polypeptide	jgi.p\|Nanoce1779_2\|611131:64402..66349 +
jgi.p\|Nanoce1779_2\|611150	polypeptide	jgi.p\|Nanoce1779_2\|611150:73797..76026 +
jgi.p\|Nanoce1779_2\|611154	polypeptide	jgi.p\|Nanoce1779_2\|611154:76544..78250 -
jgi.p\|Nanoce1779_2\|611169	polypeptide	jgi.p\|Nanoce1779_2\|611169:82327..83308 -
jgi.p\|Nanoce1779_2\|611177	polypeptide	jgi.p\|Nanoce1779_2\|611177:86333..87193 +
jgi.p\|Nanoce1779_2\|611190	polypeptide	jgi.p\|Nanoce1779_2\|611190:91343..92025 +
jgi.p\|Nanoce1779_2\|611195	polypeptide	jgi.p\|Nanoce1779_2\|611195:92922..93840 +
jgi.p\|Nanoce1779_2\|611207	polypeptide	jgi.p\|Nanoce1779_2\|611207:103777..104596 -
jgi.p\|Nanoce1779_2\|611208	polypeptide	jgi.p\|Nanoce1779_2\|611208:105113..105567 +
jgi.p\|Nanoce1779_2\|634055	polypeptide	jgi.p\|Nanoce1779_2\|634055:9773..13147 +
jgi.p\|Nanoce1779_2\|634061	polypeptide	jgi.p\|Nanoce1779_2\|634061:33061..35843 -
jgi.p\|Nanoce1779_2\|643275	polypeptide	jgi.p\|Nanoce1779_2\|643275:50882..54680 +
jgi.p\|Nanoce1779_2\|674746	polypeptide	jgi.p\|Nanoce1779_2\|674746:14..1706 +
jgi.p\|Nanoce1779_2\|674749	polypeptide	jgi.p\|Nanoce1779_2\|674749:7185..9325 -
jgi.p\|Nanoce1779_2\|674752	polypeptide	jgi.p\|Nanoce1779_2\|674752:15993..17893 +
jgi.p\|Nanoce1779_2\|674764	polypeptide	jgi.p\|Nanoce1779_2\|674764:56728..63722 +
jgi.p\|Nanoce1779_2\|674771	polypeptide	jgi.p\|Nanoce1779_2\|674771:84946..85377 +
ncniL076	syntenic_region	ncniL076:15..97191 +

Analyses

This supercontig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gennome assembly for N. oceanica CCMP1779	2018-02-01

Annotated Terms

Homology

Relationships

Sequences

Synonyms

Publications