jgi.p|Nanoce1779_2|560915, gene_10351 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|560915
Unique Namegene_10351
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_54:66285..70159 -

Link to JBrowse

Properties
Property NameValue
TranscriptId561001
ProteinId560915
Product namepara-aminobenzoate synthase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_54supercontigscaffold_54:66285..70159 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016833oxo-acid-lyase activity
GO:0004049anthranilate synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0009058biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL076ncniL076Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G03640NO09G03640Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|560915mRNA_10351-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|560915mRNA_10351Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|560915

>mRNA_10351-protein ID=mRNA_10351-protein|Name=jgi.p|Nanoce1779_2|560915|organism=Nannochloropsis oceanica|type=polypeptide|length=930bp
MPRRGKRRRQGLPAHLLTTVLAVAAALAGRVQAFSAGPPEPPAFVPPSTS
PSTASPSTLPPSLRTLLIDNYDSYTYNLAHYLAEINNGVAPTVLYNDAHH
GDWARLLAAHTPSSSSFSSSSSSSYFPFDNIVISPGPGSPDVPSDFGLSR
AALELEMDIPVLGICLGHQGLGFLHGGTVRRAPKGPVHGRLSRITHTGEG
VFANLPQDFAAVRYHSLVVDPPAPRGGGGGREGGKEGRDWPLMETAWTAD
GILMGLQHKTRPHYGVQFHPESIGTQHGHALLRNFYRLTRERARARAGGR
EQDRATIGVSTPKYHVMVRRLGRVPGVGRKKGKALSEALFASLYAGQDTA
FWLDSKEEGESALVPPAMGGRFSYMGDAASGSGLAHVVEYYLPSPPSLPP
SSSSSSSSSSSSSSSSSSSLLRVVRGRDGQVVREERGVPTNGLPDFWGGY
VGYFGYELKDDCLRLQRGEEEEEEEPGEGGREGGREGGAVAQVKTTPDAA
FVFADRLLAFDHVAGTLTLVAVVEKEGGKDCEEAAEAWLRHTEDRVWAIV
GEQRGAGDEGGRHYHEHQGDLLPRSTPPSPSPALGLAFKSLVSPTEYKQR
VDQCLELIAAGETYEVCLTGQLAADLPSSLDPFYLYRRLRRKNPAPFSAY
LRHDPQGRLRQAQNGEGGREEGREGGVDPVVATPGAPAVAVCCSSPERFL
RVTRASRQVESKPIKGTVRRGQTAEEDAVLAAGLAACEKNRAENLMIVDL
VRNDISRIARPGTVKVPRLMAVETYATVHQLVSTVTGVLAEDKDAIDAMV
ASFPGGSMTGAPKKRTMEIISRLEGGRERGPYSGALGYVAMDGLAADLNI
VIRTAVCAPGVVTVGAGGAIVAMSDREKEYEEMILKARAVAGALEGGTWE
DGHGGRGRSEVEKRKEKEKEKEKEGVVAV*
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Synonyms
Publications