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Properties
| Property Name | Value |
|---|
| TranscriptId | 611217 |
| Track | FilteredModels2 |
| ProteinId | 611131 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_54 | supercontig | scaffold_54:64195..66453 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10350 ID=mRNA_10350|Name=jgi.p|Nanoce1779_2|611131|organism=Nannochloropsis oceanica|type=mRNA|length=1289bp
ACCAGCAGTAGTAGTAGTAGTAGTAGCAGAAGCAGCTGTGGCCTTGCTCC
AGCACGATTTCGCCCTTCCCCTTCCTCCCTCCCTCCCTCCCTCCAGCCAA
CCTCATTGGCTGAAGAGACGTTGTGGGGAGGGGAGGTGCCACGGCCGTGG
GGCTTCAGACTGCGCCTGGTGAAGCCGGGAGGGGTGGACTGCGGGCGGTG
TGGGTGGATGGAGGGCTGTGTCGGCTGCCTCATCCCGCCCTCGGCCCATT
ATAAAGTCAAGCTCCGGGTAGGCGAAGCCATTGCTGTTGACTGGCACCTG
ACCGTTGTCAAGGAGCACATGCACATCCAGTCCCTCTTCACCCGCGAGGT
CCACCCCTCCCTCCGCCTCCACCAGAAGAAGGCCTTGGAGGGACTTTCCC
TACAGGATTGCTTCGACGCCTACACCACGGAGGAGGCGCTGTCGGACGAG
GTGTACTGCTCCCGCTGTAAGGTCCATCAAGCCGGAACCCGGCGGAAAGA
GGAGCTGTGGCGCCTCCCTCCCTGCCTCATTGTGCACTTGAAACGGTTTC
AGTACACACAGCACACTCGCCGCAAGCTCAATGCCAGGGTGCGTTTCCCC
CTCGACGGCCTCGACCTGTCTCCGTACGTCGCATCAGCAGCTGCGGCCCA
ACGGGAGAGAAAGAAAAAAGCTGGGCGCGCGGTCAACGATAGGGACAAAG
GAGGAGACCAATGCCCTTCCTCCCTCCCGCCTTCCTCCCCCTCCAATACT
GCTGCAGCTGCTACGGGTGTGGCGACGTGCTCTTTCCTCCCCTCCTCGTC
CTCCTCCTCGCAGTACACCCTGTATGCGATCATCCACCACGTAGGGGCCA
TGCAAGCCGGACATTATGTCGCCACCGTCCGGGTGGAGCAAGGAGGGAGA
TGGTATTGCTTCAACGATTCCAGGGTGGAAGAGGTGCCGGCCGAGGAGCT
GGTGAATCCGTCGGCCTATATCCTCTTTTATATTCGGAAGGATATGGCCC
ACCTCTCTTTCGCGGAATTTTATCCCATGCTGGATCGGCTGGGTGGAATG
GAGAGCAAGGAAGGGAGGGAGGGCGCGGACGGCAAGGAGGGAGGAGGTCA
GGACCGAAATATGAATATGACGGAAGAGGAGATGGATCAGTTTTTGCGGA
GGCGGGATGCGCCGAGCAAGTGTAGTGTTATGTGAGAGAGGTAGAGGAGA
TAGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAAGTATAGGCATTGTGTAG
CGACATGTGTAGTTGTCATGAATTATATTGTTGACCAAA back to topprotein sequence of jgi.p|Nanoce1779_2|611131 >mRNA_10350-protein ID=mRNA_10350-protein|Name=jgi.p|Nanoce1779_2|611131|organism=Nannochloropsis oceanica|type=polypeptide|length=326bp
MEGCVGCLIPPSAHYKVKLRVGEAIAVDWHLTVVKEHMHIQSLFTREVHP
SLRLHQKKALEGLSLQDCFDAYTTEEALSDEVYCSRCKVHQAGTRRKEEL
WRLPPCLIVHLKRFQYTQHTRRKLNARVRFPLDGLDLSPYVASAAAAQRE
RKKKAGRAVNDRDKGGDQCPSSLPPSSPSNTAAAATGVATCSFLPSSSSS
SQYTLYAIIHHVGAMQAGHYVATVRVEQGGRWYCFNDSRVEEVPAEELVN
PSAYILFYIRKDMAHLSFAEFYPMLDRLGGMESKEGREGADGKEGGGQDR
NMNMTEEEMDQFLRRRDAPSKCSVM* back to topmRNA from alignment at scaffold_54:64195..66453+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10350 ID=mRNA_10350|Name=jgi.p|Nanoce1779_2|611131|organism=Nannochloropsis oceanica|type=mRNA|length=2259bp|location=Sequence derived from alignment at scaffold_54:64195..66453+ (Nannochloropsis oceanica)
ACCAGCAGTAGTAGTAGTAGTAGTAGCAGAAGCAGCTGTGGCCTTGCTCC
AGCACGATTTCGCCCTTCCCCTTCCTCCCTCCCTCCCTCCCTCCAGCCAA
CCTCATTGGCTGAAGAGACGTTGTGGGGAGGGGAGGTGCCACGGCCGTGG
GGCTTCAGACTGCGCCTGGTGAAGCCGGGAGGGGTGGACTGCGGGCGGTG
TGGGTGGATGGAGGTAGGTAGGTAGGTAGGGAGGGAGGGAGGGAGAGAGG
GTGGCCCTGGGGGTTAGGCTGCAAACCGGGAGTTGTGGATTGCGGTGATG
GGGATGGAAAGGACGGACGGCTCGATCAAAGGGGGAAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAAGGTGGCTGGAGTTATACCTACGGCTTGTGT
GTAAAGAAAAGAGGGAGAGGTAGAAAGGAAGGAAGTCATGTGCCAAGCTA
TGAGCACTCGATCAACCTCCCTCCCTCTTTTTCCTCCCTTCATCTTTTCC
TCCCTCCTCCTTCCGCTTAGGGCTGTGTCGGCTGCCTCATCCCGCCCTCG
GCCCATTATAAAGTCAAGCTCCGGGTAGGCGAAGCCATTGCTGTTGACTG
GCACCTGACCGTTGTCAAGGTGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAAGGAGGGGGGGAAGGAGGGAGGGAATGACGGGATGAAGTAT
TGGAATACTCTTTCATTAGTGCCCATTCGACGTTTCTCGGCCTAACTTTA
ATCGCAAGGAGGATGCCATCGCTATCCAGTCAAGTCACCCTCCCTCTTTC
CCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCCCCTCCCAGGAGCACA
TGCACATCCAGTCCCTCTTCACCCGCGAGGTCCACCCCTCCCTCCGCCTC
CACCAGAAGAAGGCCTTGGAGGGACTTTCCCTACAGGATTGCTTCGACGC
CTACACCACGGAGGAGGCGCTGTCGGACGAGGTAGGTAGGGAGGGAGGGA
GGAAGGGAGGGCCACGTACTTTGACCTTGTCCATGTACCTCACCTTCACC
CTTATCTTCCTCTCTCCCTCCTTCTCTCCCTCTCTCAGGTGTACTGCTCC
CGCTGTAAGGTCCATCAAGCCGGAACCCGGCGGAAAGAGGAGCTGTGGCG
CCTCCCTCCCTGCCTCATTGTGCACTTGAAACGGTTTCAGTACACACAGC
ACACTCGCCGCAAGCTCAATGCCAGGGCAAGTACTCCACGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGG
GAGAGATGGATGACTCACATTCCTTTTGTGTTGTTGTCTTCTTTCGTTTC
TTTGTGATTTACACACAGGTGCGTTTCCCCCTCGACGGCCTCGACCTGTC
TCCGTACGTCGCATCAGCAGCTGCGGCCCAACGGGAGAGAAAGAAAAAAG
CTGGGCGCGCGGTCAACGATAGGGACAAAGGAGGAGACCAATGCCCTTCC
TCCCTCCCGCCTTCCTCCCCCTCCAATACTGCTGCAGCTGCTACGGGTGT
GGCGACGTGCTCTTTCCTCCCCTCCTCGTCCTCCTCCTCGCAGTACACCC
TGTATGCGATCATCCACCACGTAGGGGCCATGCAAGCCGGACATTATGTC
GCCACCGTCCGGGTGGAGCAAGGAGGGAGATGGTATTGCTTCAACGATTC
CAGGGTGAGTAGTAGCGCAGTCTTCCCTTGCTCTTCCATGCCTTCTCCCC
TCTCTTTTGCCTTCCCTCTTATTTGCACTTCACCTTTTCTTTTCCATATC
ATTTATATATTATATTCACATTCACGCACTGACAGCCGATGTCTCGCATT
TACAATCATCCCTCCCCCCCCCGTCCTCCTGCAATCCCTGCTAGGTGGAA
GAGGTGCCGGCCGAGGAGCTGGTGAATCCGTCGGCCTATATCCTCTTTTA
TATTCGGAAGGATATGGCCCACCTCTCTTTCGCGGAATTTTATCCCATGC
TGGATCGGCTGGGTGGAATGGAGAGCAAGGAAGGGAGGGAGGGCGCGGAC
GGCAAGGAGGGAGGAGGTCAGGACCGAAATATGAATATGACGGAAGAGGA
GATGGATCAGTTTTTGCGGAGGCGGGATGCGCCGAGCAAGTGTAGTGTTA
TGTGAGAGAGGTAGAGGAGATAGAGGGAGGGAGGGAGGGAGGGAGGGAGG
AAAGTATAGGCATTGTGTAGCGACATGTGTAGTTGTCATGAATTATATTG
TTGACCAAA back to topCoding sequence (CDS) from alignment at scaffold_54:64195..66453+ >mRNA_10350 ID=mRNA_10350|Name=jgi.p|Nanoce1779_2|611131|organism=Nannochloropsis oceanica|type=CDS|length=5868bp|location=Sequence derived from alignment at scaffold_54:64195..66453+ (Nannochloropsis oceanica)
ATGGAGGGCTGTGTCGGCTGCCTCATCCCGCCCTCGGCCCATTATAAAGT
CAAGCTCCGGGTAGGCGAAGCCATTGCTGTTGACTGGCACCTGACCGTTG
TCAAGGAGCACATGCACATCCAGTCCCTCTTCACCCGCGAGGTCCACCCC
TCCCTCCGCCTCCACCAGAAGAAGGCCTTGGAGGGACTTTCCCTACAGGA
TTGCTTCGACGCCTACACCACGGAGGAGGCGCTGTCGGACGAGGTGTACT
GCTCCCGCTGTAAGGTCCATCAAGCCGGAACCCGGCGGAAAGAGGAGCTG
TGGCGCCTCCCTCCCTGCCTCATTGTGCACTTGAAACGGTTTCAGTACAC
ACAGCACACTCGCCGCAAGCTCAATGCCAGGGTGCGTTTCCCCCTCGACG
GCCTCGACCTGTCTCCGTACGTCGCATCAGCAGCTGCGGCCCAACGGGAG
AGAAAGAAAAAAGCTGGGCGCGCGGTCAACGATAGGGACAAAGGAGGAGA
CCAATGCCCTTCCTCCCTCCCGCCTTCCTCCCCCTCCAATACTGCTGCAG
CTGCTACGGGTGTGGCGACGTGCTCTTTCCTCCCCTCCTCGTCCTCCTCC
TCGCAGTACACCCTGTATGCGATCATCCACCACGTAGGGGCCATGCAAGC
CGGACATTATGTCGCCACCGTCCGGGTGGAGCAAGGAGGGAGATGGTATT
GCTTCAACGATTCCAGGGTGGAAGAGGTGCCGGCCGAGGAGCTGGTGAAT
CCGTCGGCCTATATCCTCTTTTATATTCGGAAGGATATGGCCCACCTCTC
TTTCGCGGAATTTTATCCCATGCTGGATCGGCTGGGTGGAATGGAGAGCA
AGGAAGGGAGGGAGGGCGCGGACGGCAAGGAGGGAGGAGGTCAGGACCGA
AATATGAATATGACGGAAGAGGAGATGGATCAGTTTTTGCGGAGGCGGGA
TGCGCCGAGCAAGTGTAGTGTTATGTGAATGGAGGGCTGTGTCGGCTGCC
TCATCCCGCCCTCGGCCCATTATAAAGTCAAGCTCCGGGTAGGCGAAGCC
ATTGCTGTTGACTGGCACCTGACCGTTGTCAAGGAGCACATGCACATCCA
GTCCCTCTTCACCCGCGAGGTCCACCCCTCCCTCCGCCTCCACCAGAAGA
AGGCCTTGGAGGGACTTTCCCTACAGGATTGCTTCGACGCCTACACCACG
GAGGAGGCGCTGTCGGACGAGGTGTACTGCTCCCGCTGTAAGGTCCATCA
AGCCGGAACCCGGCGGAAAGAGGAGCTGTGGCGCCTCCCTCCCTGCCTCA
TTGTGCACTTGAAACGGTTTCAGTACACACAGCACACTCGCCGCAAGCTC
AATGCCAGGGTGCGTTTCCCCCTCGACGGCCTCGACCTGTCTCCGTACGT
CGCATCAGCAGCTGCGGCCCAACGGGAGAGAAAGAAAAAAGCTGGGCGCG
CGGTCAACGATAGGGACAAAGGAGGAGACCAATGCCCTTCCTCCCTCCCG
CCTTCCTCCCCCTCCAATACTGCTGCAGCTGCTACGGGTGTGGCGACGTG
CTCTTTCCTCCCCTCCTCGTCCTCCTCCTCGCAGTACACCCTGTATGCGA
TCATCCACCACGTAGGGGCCATGCAAGCCGGACATTATGTCGCCACCGTC
CGGGTGGAGCAAGGAGGGAGATGGTATTGCTTCAACGATTCCAGGGTGGA
AGAGGTGCCGGCCGAGGAGCTGGTGAATCCGTCGGCCTATATCCTCTTTT
ATATTCGGAAGGATATGGCCCACCTCTCTTTCGCGGAATTTTATCCCATG
CTGGATCGGCTGGGTGGAATGGAGAGCAAGGAAGGGAGGGAGGGCGCGGA
CGGCAAGGAGGGAGGAGGTCAGGACCGAAATATGAATATGACGGAAGAGG
AGATGGATCAGTTTTTGCGGAGGCGGGATGCGCCGAGCAAGTGTAGTGTT
ATGTGAATGGAGGGCTGTGTCGGCTGCCTCATCCCGCCCTCGGCCCATTA
TAAAGTCAAGCTCCGGGTAGGCGAAGCCATTGCTGTTGACTGGCACCTGA
CCGTTGTCAAGGAGCACATGCACATCCAGTCCCTCTTCACCCGCGAGGTC
CACCCCTCCCTCCGCCTCCACCAGAAGAAGGCCTTGGAGGGACTTTCCCT
ACAGGATTGCTTCGACGCCTACACCACGGAGGAGGCGCTGTCGGACGAGG
TGTACTGCTCCCGCTGTAAGGTCCATCAAGCCGGAACCCGGCGGAAAGAG
GAGCTGTGGCGCCTCCCTCCCTGCCTCATTGTGCACTTGAAACGGTTTCA
GTACACACAGCACACTCGCCGCAAGCTCAATGCCAGGGTGCGTTTCCCCC
TCGACGGCCTCGACCTGTCTCCGTACGTCGCATCAGCAGCTGCGGCCCAA
CGGGAGAGAAAGAAAAAAGCTGGGCGCGCGGTCAACGATAGGGACAAAGG
AGGAGACCAATGCCCTTCCTCCCTCCCGCCTTCCTCCCCCTCCAATACTG
CTGCAGCTGCTACGGGTGTGGCGACGTGCTCTTTCCTCCCCTCCTCGTCC
TCCTCCTCGCAGTACACCCTGTATGCGATCATCCACCACGTAGGGGCCAT
GCAAGCCGGACATTATGTCGCCACCGTCCGGGTGGAGCAAGGAGGGAGAT
GGTATTGCTTCAACGATTCCAGGGTGGAAGAGGTGCCGGCCGAGGAGCTG
GTGAATCCGTCGGCCTATATCCTCTTTTATATTCGGAAGGATATGGCCCA
CCTCTCTTTCGCGGAATTTTATCCCATGCTGGATCGGCTGGGTGGAATGG
AGAGCAAGGAAGGGAGGGAGGGCGCGGACGGCAAGGAGGGAGGAGGTCAG
GACCGAAATATGAATATGACGGAAGAGGAGATGGATCAGTTTTTGCGGAG
GCGGGATGCGCCGAGCAAGTGTAGTGTTATGTGAATGGAGGGCTGTGTCG
GCTGCCTCATCCCGCCCTCGGCCCATTATAAAGTCAAGCTCCGGGTAGGC
GAAGCCATTGCTGTTGACTGGCACCTGACCGTTGTCAAGGAGCACATGCA
CATCCAGTCCCTCTTCACCCGCGAGGTCCACCCCTCCCTCCGCCTCCACC
AGAAGAAGGCCTTGGAGGGACTTTCCCTACAGGATTGCTTCGACGCCTAC
ACCACGGAGGAGGCGCTGTCGGACGAGGTGTACTGCTCCCGCTGTAAGGT
CCATCAAGCCGGAACCCGGCGGAAAGAGGAGCTGTGGCGCCTCCCTCCCT
GCCTCATTGTGCACTTGAAACGGTTTCAGTACACACAGCACACTCGCCGC
AAGCTCAATGCCAGGGTGCGTTTCCCCCTCGACGGCCTCGACCTGTCTCC
GTACGTCGCATCAGCAGCTGCGGCCCAACGGGAGAGAAAGAAAAAAGCTG
GGCGCGCGGTCAACGATAGGGACAAAGGAGGAGACCAATGCCCTTCCTCC
CTCCCGCCTTCCTCCCCCTCCAATACTGCTGCAGCTGCTACGGGTGTGGC
GACGTGCTCTTTCCTCCCCTCCTCGTCCTCCTCCTCGCAGTACACCCTGT
ATGCGATCATCCACCACGTAGGGGCCATGCAAGCCGGACATTATGTCGCC
ACCGTCCGGGTGGAGCAAGGAGGGAGATGGTATTGCTTCAACGATTCCAG
GGTGGAAGAGGTGCCGGCCGAGGAGCTGGTGAATCCGTCGGCCTATATCC
TCTTTTATATTCGGAAGGATATGGCCCACCTCTCTTTCGCGGAATTTTAT
CCCATGCTGGATCGGCTGGGTGGAATGGAGAGCAAGGAAGGGAGGGAGGG
CGCGGACGGCAAGGAGGGAGGAGGTCAGGACCGAAATATGAATATGACGG
AAGAGGAGATGGATCAGTTTTTGCGGAGGCGGGATGCGCCGAGCAAGTGT
AGTGTTATGTGAATGGAGGGCTGTGTCGGCTGCCTCATCCCGCCCTCGGC
CCATTATAAAGTCAAGCTCCGGGTAGGCGAAGCCATTGCTGTTGACTGGC
ACCTGACCGTTGTCAAGGAGCACATGCACATCCAGTCCCTCTTCACCCGC
GAGGTCCACCCCTCCCTCCGCCTCCACCAGAAGAAGGCCTTGGAGGGACT
TTCCCTACAGGATTGCTTCGACGCCTACACCACGGAGGAGGCGCTGTCGG
ACGAGGTGTACTGCTCCCGCTGTAAGGTCCATCAAGCCGGAACCCGGCGG
AAAGAGGAGCTGTGGCGCCTCCCTCCCTGCCTCATTGTGCACTTGAAACG
GTTTCAGTACACACAGCACACTCGCCGCAAGCTCAATGCCAGGGTGCGTT
TCCCCCTCGACGGCCTCGACCTGTCTCCGTACGTCGCATCAGCAGCTGCG
GCCCAACGGGAGAGAAAGAAAAAAGCTGGGCGCGCGGTCAACGATAGGGA
CAAAGGAGGAGACCAATGCCCTTCCTCCCTCCCGCCTTCCTCCCCCTCCA
ATACTGCTGCAGCTGCTACGGGTGTGGCGACGTGCTCTTTCCTCCCCTCC
TCGTCCTCCTCCTCGCAGTACACCCTGTATGCGATCATCCACCACGTAGG
GGCCATGCAAGCCGGACATTATGTCGCCACCGTCCGGGTGGAGCAAGGAG
GGAGATGGTATTGCTTCAACGATTCCAGGGTGGAAGAGGTGCCGGCCGAG
GAGCTGGTGAATCCGTCGGCCTATATCCTCTTTTATATTCGGAAGGATAT
GGCCCACCTCTCTTTCGCGGAATTTTATCCCATGCTGGATCGGCTGGGTG
GAATGGAGAGCAAGGAAGGGAGGGAGGGCGCGGACGGCAAGGAGGGAGGA
GGTCAGGACCGAAATATGAATATGACGGAAGAGGAGATGGATCAGTTTTT
GCGGAGGCGGGATGCGCCGAGCAAGTGTAGTGTTATGTGAATGGAGGGCT
GTGTCGGCTGCCTCATCCCGCCCTCGGCCCATTATAAAGTCAAGCTCCGG
GTAGGCGAAGCCATTGCTGTTGACTGGCACCTGACCGTTGTCAAGGAGCA
CATGCACATCCAGTCCCTCTTCACCCGCGAGGTCCACCCCTCCCTCCGCC
TCCACCAGAAGAAGGCCTTGGAGGGACTTTCCCTACAGGATTGCTTCGAC
GCCTACACCACGGAGGAGGCGCTGTCGGACGAGGTGTACTGCTCCCGCTG
TAAGGTCCATCAAGCCGGAACCCGGCGGAAAGAGGAGCTGTGGCGCCTCC
CTCCCTGCCTCATTGTGCACTTGAAACGGTTTCAGTACACACAGCACACT
CGCCGCAAGCTCAATGCCAGGGTGCGTTTCCCCCTCGACGGCCTCGACCT
GTCTCCGTACGTCGCATCAGCAGCTGCGGCCCAACGGGAGAGAAAGAAAA
AAGCTGGGCGCGCGGTCAACGATAGGGACAAAGGAGGAGACCAATGCCCT
TCCTCCCTCCCGCCTTCCTCCCCCTCCAATACTGCTGCAGCTGCTACGGG
TGTGGCGACGTGCTCTTTCCTCCCCTCCTCGTCCTCCTCCTCGCAGTACA
CCCTGTATGCGATCATCCACCACGTAGGGGCCATGCAAGCCGGACATTAT
GTCGCCACCGTCCGGGTGGAGCAAGGAGGGAGATGGTATTGCTTCAACGA
TTCCAGGGTGGAAGAGGTGCCGGCCGAGGAGCTGGTGAATCCGTCGGCCT
ATATCCTCTTTTATATTCGGAAGGATATGGCCCACCTCTCTTTCGCGGAA
TTTTATCCCATGCTGGATCGGCTGGGTGGAATGGAGAGCAAGGAAGGGAG
GGAGGGCGCGGACGGCAAGGAGGGAGGAGGTCAGGACCGAAATATGAATA
TGACGGAAGAGGAGATGGATCAGTTTTTGCGGAGGCGGGATGCGCCGAGC
AAGTGTAGTGTTATGTGA back to top
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