jgi.p|Nanoce1779_2|611083, gene_10338 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|611083
Unique Namegene_10338
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_54:22627..24274 +

Link to JBrowse

Properties
Property NameValue
TranscriptId611169
ProteinId611083
Product nameHIT-like domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_54supercontigscaffold_54:22627..24274 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003923GPI-anchor transamidase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0051336regulation of hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL076ncniL076Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G03510NO09G03510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|611083mRNA_10338-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|611083mRNA_10338Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|611083

>mRNA_10338-protein ID=mRNA_10338-protein|Name=jgi.p|Nanoce1779_2|611083|organism=Nannochloropsis oceanica|type=polypeptide|length=331bp
MFQKAGPVLANTAKLLYHRAEPGKVYIIKLTPSSPLRAQRGVEFVLLAMP
PCQALATSLPERWQDALRRTYNELLKAFVEHVVPKAAVRTKKQSLVDKGD
TSATVLSPPVEVEKSQGPPTLIPVYRHPGLPPQSVSWHGGLHQYLQHATA
LKTFIFLESPQWMFIYDGYPKAKVHLLLLSKPTFMAVSDVTKLRREEHGE
RLARLHVEARRIATKLEQDMPGLCLRLGYHSVPSMQPLHLHIISQEFDSS
SLKTKKQWNSFTTSFFLNPAEVETALQEQGRIFVDRVNAEALLKHGLRCH
GCGAGQKNMPALKQHLTCCRQVAQLETGST*
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Synonyms
Publications