NO09G03510, NO09G03510 (gene) Nannochloropsis oceanica

Overview
NameNO09G03510
Unique NameNO09G03510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1560
Alignment locationchr9:1004391..1005950 +

Link to JBrowse

Properties
Property NameValue
DescriptionBasic helix-loop-helix family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1004391..1005950 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0033699DNA 5'-adenosine monophosphate hydrolase activity
GO:0033699DNA 5'-adenosine monophosphate hydrolase activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0090305nucleic acid phosphodiester bond hydrolysis
GO:0006281DNA repair
Vocabulary: INTERPRO
TermDefinition
IPR036265HIT-like_sf
IPR026963Aprataxin
IPR032566Znf-C2HE
Homology
BLAST of NO09G03510 vs. NCBI_GenBank
Match: EWM27445.1 (basic helix-loop-helix family protein [Nannochloropsis gaditana])

HSP 1 Score: 428.3 bits (1100), Expect = 3.300e-116
Identity = 234/457 (51.20%), Postives = 304/457 (66.52%), Query Frame = 0
Query:   65 ELPVVCLALPNFGPAEAVNEALSILFECVGQFLNGPD----TSSKSTPSSSPVVLEIIVVVEEAAGRYAEKLRTLAAAIP---IQAIAQRRVRLHLGKLAAL-KETEGAVYAQAIAVPCDRRLLPSDHPVAKTMFQKAGPVLANTAKLLYHRAEPGKVYIIKLTPSSPLRAQRGVEFVLLAMPPCQALATSLPERWQDALRRTYNELLKAFVEHVVPKAAV-RTKKQSLVDKGDTSATVLSPPVEV-EKSQGPPTLIPVYRHPGLPPQSVSWHGGLHQYLQHATALKTFIFLESPQWMFIYDGYPKAKVHLLLLSKPTFMAVSDVTKLRREEHGERLARLHVEARRIATKLEQDMPGLCLRLGYHSVPSMQPLHLHIISQEFDSSSLKTKKQWNSFTTSFFLNPAEVETALQEQGRIFVDRVNAEALLKHGLRCHGCGAGQKNMPALKQHLTCCRQV 512
            E  VV LA+PNFGPAE VN +L IL   V  FL+         S      S  VLE +VVV+EA    A KL   A  +       I + R RLH G++ AL +ET G+ Y Q IAVPC R  LP+DHPVA   F+ AGP L NTA+LL+H+AEPG VY IKLT SS L  Q+GVE+VLLAMPPCQALA+ LP+ W ++L+ TY  L++ F+E +V K  + +   Q +  K + ++T   P ++  E+       IPVY+HPG P Q   WHG L +YL H   L+ FIF E+ +WM IYDGYPKAKVHLLL+ KP F+ ++ VT+L  ++H ++++RLH  AR IATKLE+D  GL LR+GYHS+PS++PLH+HI+SQ+FDS +LKTK+ WNSFTT FFL+  +VETALQ  G++ V   +AEALLK  LRCH CGA QK +P LKQH+  C  +
Sbjct:   35 EPAVVTLAIPNFGPAERVNASLQILTTSVANFLDSKFIVRLNESVGVLKPSKFVLE-LVVVKEAPDGDAAKLAARAGYVTRAMTCTITKPRQRLHQGEIGALTEETRGSGYPQVIAVPCSRSFLPTDHPVAMETFKNAGPQLTNTARLLFHKAEPGLVYPIKLTKSSALCVQQGVEYVLLAMPPCQALASVLPDDWSNSLQCTYETLIRVFLEQLVGKVTLPQVLPQKMDSKTEGNSTTAPPSLDKREEDHVESPHIPVYQHPGQPLQGGGWHGALIRYLDHTPELRHFIFYETSEWMAIYDGYPKAKVHLLLIPKPEFLTINSVTELSHDKHNKQISRLHSAARCIATKLEKDTNGLRLRMGYHSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTPFFLDLLQVETALQIHGKVTVRHEDAEALLKLSLRCHACGAVQKTIPDLKQHVKGCESM 490          
BLAST of NO09G03510 vs. NCBI_GenBank
Match: XP_005853932.1 (purine nucleoside phosphoramidase, partial [Nannochloropsis gaditana CCMP526] >XP_005855826.1 purine nucleoside phosphoramidase, partial [Nannochloropsis gaditana CCMP526] >EKU20535.1 purine nucleoside phosphoramidase, partial [Nannochloropsis gaditana CCMP526] >EKU22429.1 purine nucleoside phosphoramidase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 172.2 bits (435), Expect = 4.300e-39
Identity = 87/182 (47.80%), Postives = 121/182 (66.48%), Query Frame = 0
Query:  236 LAMPPCQALATSLPERWQDALRRTYNELLKAFVEHVVPKAAVR-TKKQSLVDKGDTSATVLSPPVEV-EKSQGPPTLIPVYRHPGLPPQSVSWHGGLHQYLQHATALKTFIFLESPQWMFIYDGYPKAKVHLLLLSKPTFMAVSDVTKLRREEHGERLARLHVEARRIATKLEQDMPGLCLR 416
            LAMPPCQALA+ LP+ W ++L+ TY  L++ F+E +V K  +R    Q +  K + ++T   P ++  E+       IPVY+HPG P Q   WHG L +YL H   L+ FIF E+ +WM IYDGYPKAKVHLLL+ KP F+ ++ VT+L  ++H ++++RLH  AR IATKLE+D  GL LR
Sbjct:    1 LAMPPCQALASVLPDGWSNSLQCTYETLIRVFLEQLVGKVTLRQVLPQKMDSKTEVNSTTAPPSLDKREEDHVESPHIPVYQHPGQPLQGGGWHGALIRYLDHTPELRHFIFYETSEWMAIYDGYPKAKVHLLLIPKPEFLTINSVTELSHDKHNKQISRLHSAARCIATKLEKDTNGLRLR 182          
BLAST of NO09G03510 vs. NCBI_GenBank
Match: CBN74191.1 (FHA-HIT protein [Ectocarpus siliculosus])

HSP 1 Score: 159.1 bits (401), Expect = 3.800e-35
Identity = 136/453 (30.02%), Postives = 201/453 (44.37%), Query Frame = 0
Query:   96 FLNGPDTSSKSTPSSSPVVLEIIVVVEEAAGRYAEKLRTLAAAIPIQAIAQRRVRLHLGKLAALKETEGAVYAQAIAVPCDRRLLPSDHPVAKTMFQKAGPVL-ANTAKLLYHRAEPGKVYIIKLTPSSPLRAQRGVEFVLLAMPP------CQALATSLPERWQDALRRTYNELLKAFVEHV--------------------VPKAAVRTKKQSLVDKGDTSATVLSPPVEVEKSQGPPT------LIPVYRHPGLPPQSVS----WHGGLHQYLQH---ATALKTFIFLESPQWMFIYDGYPKAKVHLLLLSKPTFMAVSDVTKLRREEHGERLARLHVEARRIATKLEQDMPGLCLRLGYHSVPSMQPLHLHIISQEFDSSSLKTKKQWNSFTTSFFLNPAEVETALQEQGRIFVDRVNAEALLKHGLRCHGCGAGQKNMPALKQHLTCC 509
            FL+ P  +S   P      L ++   EE     +  L  L    P  A A    RL +   A    ++       +  PC+ RL+         + + AG  L   + +    RA   + + +KL+  SPLR++ GV+ V+  + P       + LA   P+R +  LR+ Y++ L +F + V                                                +    +G  T       +P YR    PP  V     W   L QYL+       L+  ++    Q + +YDGYPK++ HLLLL KP F+ V   ++LRR+EH   L +LH  A  +A  L Q   G+ +R GYH +PS++PLHLHIISQ+FDS  L  +K WNSFTT FFL+ + VE  L E+G + +D+   +AL    LRC  C +   NM  LK+HL  C
Sbjct:   28 FLSSPCRTSARFPG-----LRVVFAAEEG----STALVALREHAPALAEAGHESRLVMKACALPDVSKAGARCAYLVNPCNWRLVAGGARTNMLVNRAAGDSLRQGSLEGGRTRALVAEPFAVKLSQDSPLRSE-GVDTVIQVLGPNLDPRFPECLANE-PDRARYLLRQCYDKTLDSFWKLVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGVGKGAVTKRKRALALPEYRR--TPPTPVKGAGHWKAVLFQYLKDEPMPVELQREVYFSDNQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELRRDEHLSSLRQLHATATAVAEALSQQGAGV-IRCGYHGIPSLEPLHLHIISQDFDSERLTKRKHWNSFTTDFFLDASWVEARLLERGSLGLDKERLKALEATPLRCFRCHSPMTNMTKLKEHLLGC 466          
BLAST of NO09G03510 vs. NCBI_GenBank
Match: GBC46387.1 (putative Aprataxin [Rhizophagus irregularis DAOM 181602] >PKY24946.1 HIT-like protein [Rhizophagus irregularis])

HSP 1 Score: 157.5 bits (397), Expect = 1.100e-34
Identity = 110/365 (30.14%), Postives = 185/365 (50.68%), Query Frame = 0
Query:  154 GKLAALKETEGAVYAQAIAVPCDRRLLPSDHPVAKTMFQKAGPVLANTAKLLYHR-AEPGKVYIIKLTPSSPLRAQRGVEFVLLAMPPCQALATSLP---ERWQDALRRTYNELLKAFVE-------HVVPKAAVRTKKQSLVDKGDTSATVLSPPVEVEKSQGPPTLIPVYRHPGLPPQSVSWHGGLHQYLQHATAL-KTFIFLESPQWMFIYDGYPKAKVHLLLLSKPTFMAVSDVTKLRREEHGERLARLHVEARRIATKLEQDMPGLCLRLGYHSVPSMQPLHLHIISQEFDSSSLKTKKQWNSFTTSFFLNPAEVETALQEQGRIFVDRVNAEALLKHGLRCHGCGAGQ-KNMPALKQHL 506
            G L  LK ++  +  + I V    R+ P  + ++K +F   G  L    K LY +    G+ Y +K+   S L    G+E ++  + P    +   P   E+ ++ L++TY+ +L AF E         +       ++ S  D    SA+  S  +  E S+  P+ +           S  W+  L  Y Q      K+ ++    +++ I+D YPKAK HLL++ +     + ++ K    ++ E +  L  + + +  K++Q+ P L  R+G+H+VPS++ LH+H+ISQ+F S SLK KK WNSFTT FF++  E+E  L++QG +  ++   E LLK  L+CH C A   K +P LK+HL
Sbjct:   83 GNLLQLK-SDLRIECRFIVVETTWRMKPGTNQLSKQIFDALGSKLHEELKRLYPKPGIVGEAYPVKVPKDSDLHKSEGIEQIIFVVSPNMNPSRPDPVSLEKAKELLKKTYDSILNAFWELTNGQEYRSITTIKDNVQEVSAFDILMKSASKPSSKISPESSRRTPSKV----------GSGGWNNVLLPYCQKPEMFPKSEVYYYDNEFVIIFDKYPKAKNHLLVIPRKQIDNIGELKK----QNLELVRALKEKGQWVIEKMKQENPKLFFRMGFHAVPSLRQLHMHVISQDFISPSLKNKKHWNSFTTEFFIDVEEIERILEKQGEVKFNKAYYEDLLKSPLKCHLCDAKSIKFIPDLKKHL 432          
BLAST of NO09G03510 vs. NCBI_GenBank
Match: PKC06733.1 (HIT-like protein [Rhizophagus irregularis])

HSP 1 Score: 157.5 bits (397), Expect = 1.100e-34
Identity = 110/365 (30.14%), Postives = 185/365 (50.68%), Query Frame = 0
Query:  154 GKLAALKETEGAVYAQAIAVPCDRRLLPSDHPVAKTMFQKAGPVLANTAKLLYHR-AEPGKVYIIKLTPSSPLRAQRGVEFVLLAMPPCQALATSLP---ERWQDALRRTYNELLKAFVE-------HVVPKAAVRTKKQSLVDKGDTSATVLSPPVEVEKSQGPPTLIPVYRHPGLPPQSVSWHGGLHQYLQHATAL-KTFIFLESPQWMFIYDGYPKAKVHLLLLSKPTFMAVSDVTKLRREEHGERLARLHVEARRIATKLEQDMPGLCLRLGYHSVPSMQPLHLHIISQEFDSSSLKTKKQWNSFTTSFFLNPAEVETALQEQGRIFVDRVNAEALLKHGLRCHGCGAGQ-KNMPALKQHL 506
            G L  LK ++  +  + I V    R+ P  + ++K +F   G  L    K LY +    G+ Y +K+   S L    G+E ++  + P    +   P   E+ ++ L++TY+ +L AF E         +       ++ S  D    SA+  S  +  E S+  P+ +           S  W+  L  Y Q      K+ ++    +++ I+D YPKAK HLL++ +     + ++ K    ++ E +  L  + + +  K++Q+ P L  R+G+H+VPS++ LH+H+ISQ+F S SLK KK WNSFTT FF++  E+E  L++QG +  ++   E LLK  L+CH C A   K +P LK+HL
Sbjct:   83 GNLLQLK-SDLRIECRFIVVETTWRMKPGTNQLSKQIFDALGSKLHEELKRLYPKPGIVGEAYPVKVPKDSDLHKSEGIEQIIFVVSPNMNPSRPDPVSLEKAKELLKKTYDSILNAFWELTNGQEYRSITTIKDNVQEVSAFDILMKSASKPSSKISPESSRRTPSKV----------GSGGWNNVLLPYCQKPEMFPKSEVYYYDNEFVIIFDKYPKAKNHLLVIPRKQIDNIGELKK----QNLELVRALKEKGQWVIEKMKQENPKLFFRMGFHAVPSLRKLHMHVISQDFISPSLKNKKHWNSFTTEFFIDVEEIERILEKQGEVKFNKAYYEDLLKSPLKCHLCDAKSIKFIPDLKKHL 432          
BLAST of NO09G03510 vs. NCBI_GenBank
Match: PKC69915.1 (HIT-like protein [Rhizophagus irregularis] >POG72056.1 hypothetical protein GLOIN_2v1774116 [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 157.5 bits (397), Expect = 1.100e-34
Identity = 110/365 (30.14%), Postives = 185/365 (50.68%), Query Frame = 0
Query:  154 GKLAALKETEGAVYAQAIAVPCDRRLLPSDHPVAKTMFQKAGPVLANTAKLLYHR-AEPGKVYIIKLTPSSPLRAQRGVEFVLLAMPPCQALATSLP---ERWQDALRRTYNELLKAFVE-------HVVPKAAVRTKKQSLVDKGDTSATVLSPPVEVEKSQGPPTLIPVYRHPGLPPQSVSWHGGLHQYLQHATAL-KTFIFLESPQWMFIYDGYPKAKVHLLLLSKPTFMAVSDVTKLRREEHGERLARLHVEARRIATKLEQDMPGLCLRLGYHSVPSMQPLHLHIISQEFDSSSLKTKKQWNSFTTSFFLNPAEVETALQEQGRIFVDRVNAEALLKHGLRCHGCGAGQ-KNMPALKQHL 506
            G L  LK ++  +  + I V    R+ P  + ++K +F   G  L    K LY +    G+ Y +K+   S L    G+E ++  + P    +   P   E+ ++ L++TY+ +L AF E         +       ++ S  D    SA+  S  +  E S+  P+ +           S  W+  L  Y Q      K+ ++    +++ I+D YPKAK HLL++ +     + ++ K    ++ E +  L  + + +  K++Q+ P L  R+G+H+VPS++ LH+H+ISQ+F S SLK KK WNSFTT FF++  E+E  L++QG +  ++   E LLK  L+CH C A   K +P LK+HL
Sbjct:   97 GNLLQLK-SDLRIECRFIVVETTWRMKPGTNQLSKQIFDALGSKLHEELKRLYPKPGIVGEAYPVKVPKDSDLHKSEGIEQIIFVVSPNMNPSRPDPVSLEKAKELLKKTYDSILNAFWELTNGQEYRSITTIKDNVQEVSAFDILMKSASKPSSKISPESSRRTPSKV----------GSGGWNNVLLPYCQKPEMFPKSEVYYYDNEFVIIFDKYPKAKNHLLVIPRKQIDNIGELKK----QNLELVRALKEKGQWVIEKMKQENPKLFFRMGFHAVPSLRQLHMHVISQDFISPSLKNKKHWNSFTTEFFIDVEEIERILEKQGEVKFNKAYYEDLLKSPLKCHLCDAKSIKFIPDLKKHL 446          
BLAST of NO09G03510 vs. NCBI_GenBank
Match: PKY51101.1 (HIT-like protein [Rhizophagus irregularis])

HSP 1 Score: 156.8 bits (395), Expect = 1.900e-34
Identity = 110/365 (30.14%), Postives = 185/365 (50.68%), Query Frame = 0
Query:  154 GKLAALKETEGAVYAQAIAVPCDRRLLPSDHPVAKTMFQKAGPVLANTAKLLYHR-AEPGKVYIIKLTPSSPLRAQRGVEFVLLAMPPCQALATSLP---ERWQDALRRTYNELLKAFVE-------HVVPKAAVRTKKQSLVDKGDTSATVLSPPVEVEKSQGPPTLIPVYRHPGLPPQSVSWHGGLHQYLQHATAL-KTFIFLESPQWMFIYDGYPKAKVHLLLLSKPTFMAVSDVTKLRREEHGERLARLHVEARRIATKLEQDMPGLCLRLGYHSVPSMQPLHLHIISQEFDSSSLKTKKQWNSFTTSFFLNPAEVETALQEQGRIFVDRVNAEALLKHGLRCHGCGAGQ-KNMPALKQHL 506
            G L  LK ++  +  + I V    R+ P  + ++K +F   G  L    K LY +    G+ Y +K+   S L    G+E ++  + P    +   P   E+ ++ L++TY+ +L AF E         +       ++ S  D    SA+  S  +  E S+  P+ +           S  W+  L  Y Q      K+ ++    +++ I+D YPKAK HLL++ +     + ++ K    ++ E +  L  + + +  K++Q+ P L  R+G+H+VPS++ LH+H+ISQ+F S SLK KK WNSFTT FF++  E+E  L++QG +  ++   E LLK  L+CH C A   K +P LK+HL
Sbjct:   97 GNLLQLK-SDLRIECRFIVVETTWRMKPGTNQLSKQIFDALGSKLHEELKRLYPKPGIVGEAYPVKIPKDSDLHKSEGIEQIIFVVSPNMNPSRPDPISLEKAKELLKKTYDSILNAFWELTNGQEYRSITTIKDNVQEVSAFDILMKSASKPSFKISPESSRRTPSKV----------GSGGWNNVLLPYCQKPEMFPKSEVYYYDNEFVIIFDKYPKAKNHLLVIPRKQIDNIGELKK----QNLELVRALKEKGQWVIEKMKQENPKLFFRMGFHAVPSLRQLHMHVISQDFISPSLKNKKHWNSFTTEFFIDVEEIERILEKQGEVKFNKAYYEDLLKSPLKCHLCDAKSIKFIPDLKKHL 446          
BLAST of NO09G03510 vs. NCBI_GenBank
Match: PKK77818.1 (HIT-like protein [Rhizophagus irregularis])

HSP 1 Score: 155.2 bits (391), Expect = 5.500e-34
Identity = 109/365 (29.86%), Postives = 185/365 (50.68%), Query Frame = 0
Query:  154 GKLAALKETEGAVYAQAIAVPCDRRLLPSDHPVAKTMFQKAGPVLANTAKLLYHR-AEPGKVYIIKLTPSSPLRAQRGVEFVLLAMPPCQALATSLP---ERWQDALRRTYNELLKAFVE-------HVVPKAAVRTKKQSLVDKGDTSATVLSPPVEVEKSQGPPTLIPVYRHPGLPPQSVSWHGGLHQYLQHATAL-KTFIFLESPQWMFIYDGYPKAKVHLLLLSKPTFMAVSDVTKLRREEHGERLARLHVEARRIATKLEQDMPGLCLRLGYHSVPSMQPLHLHIISQEFDSSSLKTKKQWNSFTTSFFLNPAEVETALQEQGRIFVDRVNAEALLKHGLRCHGCGAGQ-KNMPALKQHL 506
            G L  LK ++  +  + I V    R+ P  + ++K +F   G  L    K LY +    G+ Y +K+   S L    G+E ++  + P    +   P   E+ ++ L++TY+ +L AF E         +       ++ S  D    SA+  S  +  + S+  P+ +           S  W+  L  Y Q      K+ ++    +++ I+D YPKAK HLL++ +     + ++ K    ++ E +  L  + + +  K++Q+ P L  R+G+H+VPS++ LH+H+ISQ+F S SLK KK WNSFTT FF++  E+E  L++QG +  ++   E LLK  L+CH C A   K +P LK+HL
Sbjct:   92 GNLLQLK-SDLRIECRFIVVETTWRMKPGINQLSKQIFDALGSKLHEELKRLYPKPGIVGEAYPVKVPKDSDLHKSEGIEQIIFVVSPNMNPSRPDPVSLEKAKELLKKTYDSILNAFWELTNGQEYRSITTIKDNVQEVSAFDILMKSASKPSSKISPKSSRRTPSKV----------GSGGWNNVLLPYCQKPEMFPKSEVYYYDNEFVIIFDKYPKAKNHLLVIPRKQIDNIGELKK----QNLELVRALKEKGQWVIEKMKQENPKLFFRMGFHAVPSLRQLHMHVISQDFISPSLKNKKHWNSFTTEFFIDVEEIERILEKQGEVKFNKAYYEDLLKSPLKCHLCDAKSIKFIPDLKKHL 441          
BLAST of NO09G03510 vs. NCBI_GenBank
Match: XP_019089880.1 (PREDICTED: transcription factor bHLH140-like isoform X2 [Camelina sativa])

HSP 1 Score: 154.8 bits (390), Expect = 7.100e-34
Identity = 128/452 (28.32%), Postives = 207/452 (45.80%), Query Frame = 0
Query:   71 LALPNFGPAE---AVNEALSILFECVGQFLNGPDTSSKSTPSSSPVVLEIIVVVEEAAGRYAEKLRTLAAAIPIQAIAQRRVRLHLGKLAALKETEGAVYAQAIAVPCDRRLLPSDHPVAKTMFQKAGPVLANTAKLLYHRAEPGKVYIIKLTPSSPLRAQRGVEFVLLAMPPCQALATSLPERWQD-------ALRRTYNELLKAFVEHV--VPKAAVRTKKQSLVDKGDTSATVLSPPVEVEKSQGPPTLIPVYRHPGLPPQSVSWHGGLHQYLQHATALKTFIFLESPQWMFIYDGYPKAKVHLLLLSKPTFM-AVSDVTKLRREEHGERLARLHVEARRIATKLEQDMPGLCLRLGYHSVPSMQPLHLHIISQEFDSSSLKTKKQWNSFTTSFFLNPAEVETALQEQGRIFVDRVNAEALLKHGLRCHGCGAGQKNMPALKQHLTCCR 510
            LA P+   A+    + +A  I+ E   +FL    T+              +V+V+ + G  ++ L  + A    + I   R    +G +  L+ +EG ++   IA   + RL P    V   +F+ AGP L    ++  +   PGK  ++ L  + PL    G+  V+  + P   +  + P+   +        LR  Y  L + F+  V    K   R+ + +L D G          +E  +  G            +  +  +W   LH    H    +  +   S   + I D YPKA+ H+L+L++   +  + DV    R+E+ + L  +H    +   + + +   L  RLGYHSVPSM+ LHLH+ISQ+FDS SLK KK WNSFT+SFF +  +V   ++ QG+     V +E LLK  LRC+ C +   N+P LK H+  CR
Sbjct:  235 LAFPSISTADFQFDLEQASDIIVEKAEEFLPKVGTAR-------------LVLVDLSHG--SKILSLVKAKASQKNIDSARFFTFVGDITKLR-SEGGLHCNVIANATNWRLKPGGGGVNAAIFKAAGPDLETATRVRANTLLPGKAVVVPLPSTCPLHNAEGITHVIHVLGP--NMNPNRPDNLNNDYTKGCKTLREAYTSLFEGFLSVVQDQSKFPKRSNQTALSDSGS---------LEDTRDSGKK----------MSKEWSTWALALHTIAMHPERHENIVLEFSDNIVVINDQYPKARKHVLVLARQESLDGLEDV----RKENFQLLQEMHNVGLKWVDRFQNEDASLIFRLGYHSVPSMRQLHLHVISQDFDSDSLKNKKHWNSFTSSFFRDSVDVLEEVKSQGKA---NVASEDLLKGELRCNRCRSAHPNIPKLKSHVRSCR 642          
BLAST of NO09G03510 vs. NCBI_GenBank
Match: XP_019089879.1 (PREDICTED: transcription factor bHLH140-like isoform X1 [Camelina sativa])

HSP 1 Score: 152.1 bits (383), Expect = 4.600e-33
Identity = 130/461 (28.20%), Postives = 211/461 (45.77%), Query Frame = 0
Query:   71 LALPNFGPAE---AVNEALSILFECVGQFLNGPDTSSKSTPSSSPVVLEIIVVVEEAAGRYAEKLRTLAAAIPIQAIAQRRVRLHLGKLAALKETEGAVYAQAIAVPCDRRLLPSDHPVAKTMFQKAGPVLANTAKLLYHRAEPGKVYIIKLTPSSPLRAQRGVEFVLLAMPPCQALATSLPERWQD-------ALRRTYNELLKAFVEHV--VPKAAVRTKKQSLVDKGDTSATVLSPPVEVEKSQGPPTL-------IPVYRHPG--LPPQSVSWHGGLHQYLQHATALKTFIFLESPQWMFIYDGYPKAKVHLLLLSKPTFM-AVSDVTKLRREEHGERLARLHVEARRIATKLEQDMPGLCLRLGYHSVPSMQPLHLHIISQEFDSSSLKTKKQWNSFTTSFFLNPAEVETALQEQGRIFVDRVNAEALLKHGLRCHGCGAGQKNMPALKQHLTCCR 510
            LA P+   A+    + +A  I+ E   +FL    T+              +V+V+ + G  ++ L  + A    + I   R    +G +  L+ +EG ++   IA   + RL P    V   +F+ AGP L    ++  +   PGK  ++ L  + PL    G+  V+  + P   +  + P+   +        LR  Y  L + F+  V    K   R+ + +L D G+          + + SQ            +   R  G  +  +  +W   LH    H    +  +   S   + I D YPKA+ H+L+L++   +  + DV    R+E+ + L  +H    +   + + +   L  RLGYHSVPSM+ LHLH+ISQ+FDS SLK KK WNSFT+SFF +  +V   ++ QG+     V +E LLK  LRC+ C +   N+P LK H+  CR
Sbjct:  235 LAFPSISTADFQFDLEQASDIIVEKAEEFLPKVGTAR-------------LVLVDLSHG--SKILSLVKAKASQKNIDSARFFTFVGDITKLR-SEGGLHCNVIANATNWRLKPGGGGVNAAIFKAAGPDLETATRVRANTLLPGKAVVVPLPSTCPLHNAEGITHVIHVLGP--NMNPNRPDNLNNDYTKGCKTLREAYTSLFEGFLSVVQDQSKFPKRSNQTALSDSGENIKEDSERNKKYKGSQDNAVTNNMESGSLEDTRDSGKKMSKEWSTWALALHTIAMHPERHENIVLEFSDNIVVINDQYPKARKHVLVLARQESLDGLEDV----RKENFQLLQEMHNVGLKWVDRFQNEDASLIFRLGYHSVPSMRQLHLHVISQDFDSDSLKNKKHWNSFTSSFFRDSVDVLEEVKSQGKA---NVASEDLLKGELRCNRCRSAHPNIPKLKSHVRSCR 670          
The following BLAST results are available for this feature:
BLAST of NO09G03510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27445.13.300e-11651.20basic helix-loop-helix family protein [Nannochloro... [more]
XP_005853932.14.300e-3947.80purine nucleoside phosphoramidase, partial [Nannoc... [more]
CBN74191.13.800e-3530.02FHA-HIT protein [Ectocarpus siliculosus][more]
GBC46387.11.100e-3430.14putative Aprataxin [Rhizophagus irregularis DAOM 1... [more]
PKC06733.11.100e-3430.14HIT-like protein [Rhizophagus irregularis][more]
PKC69915.11.100e-3430.14HIT-like protein [Rhizophagus irregularis] >POG720... [more]
PKY51101.11.900e-3430.14HIT-like protein [Rhizophagus irregularis][more]
PKK77818.15.500e-3429.86HIT-like protein [Rhizophagus irregularis][more]
XP_019089880.17.100e-3428.32PREDICTED: transcription factor bHLH140-like isofo... [more]
XP_019089879.14.600e-3328.20PREDICTED: transcription factor bHLH140-like isofo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR076ncniR076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010897NSK010897Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03510.1NO09G03510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|611083gene_10338Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100107g6gene3105Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03510.1NO09G03510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03510 ID=NO09G03510|Name=NO09G03510|organism=Nannochloropsis oceanica|type=gene|length=1560bp
ATGAAAGACGCAGCAGCGGCAGCAGCACCAGCAGCATCAGCAGCGCCAGC
AGCATCAGCAGCGCCAGCAGCATCGGCAGCGCCATCATCAGCAGCATCCT
TCGATTCAAAGTCAGGCATAAAACGTCCTGCGGAAAAAAACGCCACGACC
GCCACTGCCGCTAAGCAAGGGCGTTGCGATAACGTTTGCGAAGAGCTTCC
AGTGGTGTGTTTGGCTTTGCCCAATTTTGGCCCTGCCGAGGCAGTGAACG
AGGCACTCTCGATTCTTTTCGAGTGCGTAGGTCAATTTCTCAATGGCCCT
GACACATCGTCAAAGAGCACTCCATCGTCGTCACCAGTCGTGCTTGAGAT
CATAGTGGTGGTGGAAGAAGCAGCGGGTAGATACGCGGAGAAACTCCGAA
CACTGGCCGCAGCAATCCCCATTCAAGCCATCGCGCAACGACGCGTTCGG
TTACACTTGGGAAAGCTGGCAGCGCTGAAGGAGACGGAGGGTGCTGTCTA
TGCACAAGCCATTGCTGTACCTTGCGATCGTCGCCTTTTACCATCTGATC
ACCCTGTGGCGAAAACTATGTTTCAAAAGGCGGGGCCTGTCCTTGCCAAC
ACGGCCAAGCTTCTGTATCACAGAGCCGAGCCCGGCAAGGTGTACATCAT
CAAACTGACGCCGTCAAGTCCCTTGCGCGCCCAGCGAGGAGTCGAATTTG
TGCTCTTGGCGATGCCTCCCTGTCAGGCATTGGCGACGAGCTTGCCCGAG
AGGTGGCAAGATGCATTGCGAAGAACTTATAACGAGTTGTTGAAAGCATT
TGTGGAGCATGTAGTTCCCAAGGCCGCGGTTCGGACTAAAAAGCAAAGTC
TCGTGGATAAGGGAGATACTTCAGCCACAGTACTGTCGCCGCCAGTGGAG
GTAGAAAAGAGCCAAGGTCCTCCAACGCTCATTCCTGTCTACCGTCACCC
GGGCCTGCCCCCGCAAAGTGTCAGCTGGCACGGTGGCTTACATCAGTACC
TTCAACATGCCACGGCGCTTAAGACCTTCATCTTCCTCGAGTCACCGCAA
TGGATGTTCATCTACGACGGGTACCCGAAAGCCAAGGTCCACCTCCTTTT
GCTTTCCAAGCCGACATTTATGGCTGTAAGTGATGTAACGAAACTCCGGC
GAGAGGAGCACGGGGAGAGGTTAGCTCGGTTACATGTCGAAGCACGGCGC
ATCGCCACCAAGTTGGAGCAAGACATGCCTGGTCTGTGCCTCCGACTGGG
CTATCACAGTGTGCCTTCTATGCAACCCCTCCATCTGCACATTATCTCGC
AGGAATTTGACTCTTCTTCTCTCAAGACGAAAAAGCAATGGAACAGCTTC
ACAACCTCTTTTTTCTTGAATCCAGCAGAGGTGGAGACAGCCCTGCAAGA
GCAAGGTCGAATATTCGTGGACCGGGTCAATGCAGAAGCATTGTTGAAAC
ACGGGTTACGCTGCCATGGGTGTGGTGCAGGGCAGAAGAATATGCCTGCA
CTCAAGCAGCATTTGACATGTTGTCGGCAGGTTGCACAACTGGAAACAGG
GAGCACATGA
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protein sequence of NO09G03510.1

>NO09G03510.1-protein ID=NO09G03510.1-protein|Name=NO09G03510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=520bp
MKDAAAAAAPAASAAPAASAAPAASAAPSSAASFDSKSGIKRPAEKNATT
ATAAKQGRCDNVCEELPVVCLALPNFGPAEAVNEALSILFECVGQFLNGP
DTSSKSTPSSSPVVLEIIVVVEEAAGRYAEKLRTLAAAIPIQAIAQRRVR
LHLGKLAALKETEGAVYAQAIAVPCDRRLLPSDHPVAKTMFQKAGPVLAN
TAKLLYHRAEPGKVYIIKLTPSSPLRAQRGVEFVLLAMPPCQALATSLPE
RWQDALRRTYNELLKAFVEHVVPKAAVRTKKQSLVDKGDTSATVLSPPVE
VEKSQGPPTLIPVYRHPGLPPQSVSWHGGLHQYLQHATALKTFIFLESPQ
WMFIYDGYPKAKVHLLLLSKPTFMAVSDVTKLRREEHGERLARLHVEARR
IATKLEQDMPGLCLRLGYHSVPSMQPLHLHIISQEFDSSSLKTKKQWNSF
TTSFFLNPAEVETALQEQGRIFVDRVNAEALLKHGLRCHGCGAGQKNMPA
LKQHLTCCRQVAQLETGST*
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Synonyms
Publications