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Properties
| Property Name | Value |
|---|
| TranscriptId | 534044 |
| Track | FilteredModels2 |
| ProteinId | 533958 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_54 | supercontig | scaffold_54:87574..89446 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10359 ID=mRNA_10359|Name=jgi.p|Nanoce1779_2|533958|organism=Nannochloropsis oceanica|type=mRNA|length=1059bp
ATGAGGAGGAGACGCCTGTGCCTGACCTTGACCACCCCCTCGTCCTCCTT
CCCTTCCTACGCTGTCTCTTCCCCCCCAAAGTCGCCTTCCTTGTCCTTCA
ATGAAAACGGAGGGCGGGAAGGAGGGCAGGTGGTGTTGGACCGACCTGGA
AGCATCGCGCGGGTGCATGCCTACTTCAGGTGGCGACGGCAGGAAGGGAG
GGAGAACAAGCGCCTGGCCAAGTTCAAGGAAGCGTGTTGGAGGAGCTGTG
TGTATCTAACGGCAGTGGGGCTCTCGTGGGTGTGTGTGGTTCCCCAGCTG
TGGTTTTGGGACATACGGGAGTGCTGGTACGGCTATCCCCTCCAAGCCGT
ACCTTCCCCTGTGGTCTTCTACTACGCCTACCAGCTCGGCAATTATCTCC
ACCTGTCTCTCTTCCAATTCACCGACACCAAACGGAGCGATTTTTGGGAG
ATGTTTCTCCACCACGCCGCCACCCTTTTCCTCATAGCCTTCTCTTGGCT
GTCCTGTTTCATCCGCATTGGCACCCTGGTGATGATCGTCCATGATCTGT
CCGACGTCTTTTTGGAAACGGCCAAGATTTTCAACTACACCTCCCGCTCT
CGCCCCTGGGCGCAGGTGGTCACCGACAGCCTCTTCGTGTGCTTTGCGGT
CTCATTTTTCCTGACCCGGCTGGTGATCTACCCATTTTGGATCCTGCACT
CCACCTTCACGCACGCCCACGCCATCATCGGGGGAAAATACTTGGGCATG
TATATATTCTATGGGATGCTCTTCGTCCTTCAATTTCTGCACGTATTCTG
GTTCTACTTAATCGCGCGGATGGCGGTCAATATGATAGTTAAAGGCAAGG
TGGAAAAAGACGTCCGGAGCGACGACGACGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGGGGATGGGAAAGTGAATGGTCGTGGAGGAAGGAACGG
AAAGACAGGAAAGGGGGGGGAGGAGGAGGGGGGAAAAGGAAAAGAGGAGG
GGGGGGAGGAGGAGGGGCAGCAACAGCAGAAGGAGGATTATATGAACAGG
ACGCAGTAA back to topprotein sequence of jgi.p|Nanoce1779_2|533958 >mRNA_10359-protein ID=mRNA_10359-protein|Name=jgi.p|Nanoce1779_2|533958|organism=Nannochloropsis oceanica|type=polypeptide|length=353bp
MRRRRLCLTLTTPSSSFPSYAVSSPPKSPSLSFNENGGREGGQVVLDRPG
SIARVHAYFRWRRQEGRENKRLAKFKEACWRSCVYLTAVGLSWVCVVPQL
WFWDIRECWYGYPLQAVPSPVVFYYAYQLGNYLHLSLFQFTDTKRSDFWE
MFLHHAATLFLIAFSWLSCFIRIGTLVMIVHDLSDVFLETAKIFNYTSRS
RPWAQVVTDSLFVCFAVSFFLTRLVIYPFWILHSTFTHAHAIIGGKYLGM
YIFYGMLFVLQFLHVFWFYLIARMAVNMIVKGKVEKDVRSDDDEEEEEEE
EEEEGDGKVNGRGGRNGKTGKGGEEEGGKGKEEGGEEEGQQQQKEDYMNR
TQ* back to topmRNA from alignment at scaffold_54:87574..89446- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10359 ID=mRNA_10359|Name=jgi.p|Nanoce1779_2|533958|organism=Nannochloropsis oceanica|type=mRNA|length=1873bp|location=Sequence derived from alignment at scaffold_54:87574..89446- (Nannochloropsis oceanica)
ATGAGGAGGAGACGCCTGTGCCTGACCTTGACCACCCCCTCGTCCTCCTT
CCCTTCCTACGCTGTCTCTTCCCCCCCAAAGTCGCCTTCCTTGTCCTTCA
ATGAAAACGGAGGGCGGGAAGGAGGGCAGGTGGTGTTGGACCGACCTGGA
AGCATCGCGCGGGTGCATGCCTACTTCAGGTGGCGACGGCAGGAAGGGAG
GGAGAACAAGCGCCTGGCCAAGTTCAAGGAAGCGTGTTGGAGGAGCTGTG
TGTATCTAACGGCAGTGGGGCTCTCGTGGGTGTGTGTGGTTCCCCAGCTG
TGGTTTTGGGACATACGGGAGTGCTGGTACGTACGCCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCATGCGCACT
CCCACTTCTCTCTCCCTCCCTCCCACCTCTCACGTCCTTTCCCTCCCTCC
GTCTCCAGGTACGGCTATCCCCTCCAAGCCGTACCTTCCCCTGTGGTCTT
CTACTACGCCTACCAGCTCGGCAATTATCTCCACCTGTCTCTCTTCCAAT
TCACCGACACCAAACGGAGCGATTTTTGGGAGATGTTTCTCCACCACGCC
GCCACCCTTTTCCTCATAGCCTTCTCTTGGCTGTCCTGGTTCGTTCGTGC
CCCTCCCTCCCCTCCTCTCTCCCTCCCTCTCTCCCTCCCTCCTTTGATTC
TCTCCTGTTTCTCTCCGTCCCTTGCCTCGCATCTCACCTTCCTTCCCTCC
CTCCCTCCTCTCTCCCTCCCTCCCTCCTTGCCTCAGTTTCATCCGCATTG
GCACCCTGGTGATGATCGTCCATGATCTGTCCGACGTCTTTTTGGGTGAG
GCCTACGACGGGAGGGAGGGAGGGAGGGAGGGAAGGGAGCGAGGTCGGTC
GTAGACGACCCGGAAAGAGGAGTTTGGAAGCCTTCCTCACATTATCTATG
CCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTGCTCCCTCCTGT
CCTTAGAAACGGCCAAGATTTTCAACTACACCTCCCGCTCTCGCCCCTGG
GCGCAGGTGGTCACCGACAGCCTCTTCGTGTGCTTTGCGGTCTCATTTTT
CCTGACCCGGCTGGTGGGAGGGGGAGGGTGGGAGGGAGGAAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGGTCGTATTCCTGTGTAATCCATAT
AAACAAACAGACAAGGCGCCAGGGGGCTCACTGCCTTCCCCCCCTGCTCC
CCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCAGGTG
ATCTACCCATTTTGGATCCTGCACTCCACCTTCACGCACGCCCACGCCAT
CATCGGGGGAAAATACTTGGGCATGTATATATTCTATGGGATGCTCTTCG
TCCTTCAATTTCTGCACGTATTCTGGTACACACGTCCTCCTGCCCTCCCT
CCTTCCCGCCCTCCCTCCCTCCCTCCCTCCCTTCCTTGTGGACCATTGGA
GGGCCCTCAGCAGCAACAAGAAACGACTCATTTATACATTTCCTTCATTT
TCTTGATTTACACATCTCCTCCTCCCCCATCGTCCCTCCCTCCCTCCCTC
CCTCCCTTTTTCAGGTTCTACTTAATCGCGCGGATGGCGGTCAATATGAT
AGTTAAAGGCAAGGTGGAAAAAGACGTCCGGAGCGACGACGACGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGGGGATGGGAAAGTGAATGGTCGT
GGAGGAAGGAACGGAAAGACAGGAAAGGGGGGGGAGGAGGAGGGGGGAAA
AGGAAAAGAGGAGGGGGGGGAGGAGGAGGGGCAGCAACAGCAGAAGGAGG
ATTATATGAACAGGACGCAGTAA back to topCoding sequence (CDS) from alignment at scaffold_54:87574..89446- >mRNA_10359 ID=mRNA_10359|Name=jgi.p|Nanoce1779_2|533958|organism=Nannochloropsis oceanica|type=CDS|length=6354bp|location=Sequence derived from alignment at scaffold_54:87574..89446- (Nannochloropsis oceanica)
GTTCTACTTAATCGCGCGGATGGCGGTCAATATGATAGTTAAAGGCAAGG
TGGAAAAAGACGTCCGGAGCGACGACGACGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGGGGATGGGAAAGTGAATGGTCGTGGAGGAAGGAACGG
AAAGACAGGAAAGGGGGGGGAGGAGGAGGGGGGAAAAGGAAAAGAGGAGG
GGGGGGAGGAGGAGGGGCAGCAACAGCAGAAGGAGGATTATATGAACAGG
ACGCAGTAAGTGATCTACCCATTTTGGATCCTGCACTCCACCTTCACGCA
CGCCCACGCCATCATCGGGGGAAAATACTTGGGCATGTATATATTCTATG
GGATGCTCTTCGTCCTTCAATTTCTGCACGTATTCTGAAACGGCCAAGAT
TTTCAACTACACCTCCCGCTCTCGCCCCTGGGCGCAGGTGGTCACCGACA
GCCTCTTCGTGTGCTTTGCGGTCTCATTTTTCCTGACCCGGCTGTTTCAT
CCGCATTGGCACCCTGGTGATGATCGTCCATGATCTGTCCGACGTCTTTT
TGGGTACGGCTATCCCCTCCAAGCCGTACCTTCCCCTGTGGTCTTCTACT
ACGCCTACCAGCTCGGCAATTATCTCCACCTGTCTCTCTTCCAATTCACC
GACACCAAACGGAGCGATTTTTGGGAGATGTTTCTCCACCACGCCGCCAC
CCTTTTCCTCATAGCCTTCTCTTGGCTGTCCTGATGAGGAGGAGACGCCT
GTGCCTGACCTTGACCACCCCCTCGTCCTCCTTCCCTTCCTACGCTGTCT
CTTCCCCCCCAAAGTCGCCTTCCTTGTCCTTCAATGAAAACGGAGGGCGG
GAAGGAGGGCAGGTGGTGTTGGACCGACCTGGAAGCATCGCGCGGGTGCA
TGCCTACTTCAGGTGGCGACGGCAGGAAGGGAGGGAGAACAAGCGCCTGG
CCAAGTTCAAGGAAGCGTGTTGGAGGAGCTGTGTGTATCTAACGGCAGTG
GGGCTCTCGTGGGTGTGTGTGGTTCCCCAGCTGTGGTTTTGGGACATACG
GGAGTGCTGGTTCTACTTAATCGCGCGGATGGCGGTCAATATGATAGTTA
AAGGCAAGGTGGAAAAAGACGTCCGGAGCGACGACGACGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGGGGATGGGAAAGTGAATGGTCGTGGAGG
AAGGAACGGAAAGACAGGAAAGGGGGGGGAGGAGGAGGGGGGAAAAGGAA
AAGAGGAGGGGGGGGAGGAGGAGGGGCAGCAACAGCAGAAGGAGGATTAT
ATGAACAGGACGCAGTAAGTGATCTACCCATTTTGGATCCTGCACTCCAC
CTTCACGCACGCCCACGCCATCATCGGGGGAAAATACTTGGGCATGTATA
TATTCTATGGGATGCTCTTCGTCCTTCAATTTCTGCACGTATTCTGAAAC
GGCCAAGATTTTCAACTACACCTCCCGCTCTCGCCCCTGGGCGCAGGTGG
TCACCGACAGCCTCTTCGTGTGCTTTGCGGTCTCATTTTTCCTGACCCGG
CTGTTTCATCCGCATTGGCACCCTGGTGATGATCGTCCATGATCTGTCCG
ACGTCTTTTTGGGTACGGCTATCCCCTCCAAGCCGTACCTTCCCCTGTGG
TCTTCTACTACGCCTACCAGCTCGGCAATTATCTCCACCTGTCTCTCTTC
CAATTCACCGACACCAAACGGAGCGATTTTTGGGAGATGTTTCTCCACCA
CGCCGCCACCCTTTTCCTCATAGCCTTCTCTTGGCTGTCCTGATGAGGAG
GAGACGCCTGTGCCTGACCTTGACCACCCCCTCGTCCTCCTTCCCTTCCT
ACGCTGTCTCTTCCCCCCCAAAGTCGCCTTCCTTGTCCTTCAATGAAAAC
GGAGGGCGGGAAGGAGGGCAGGTGGTGTTGGACCGACCTGGAAGCATCGC
GCGGGTGCATGCCTACTTCAGGTGGCGACGGCAGGAAGGGAGGGAGAACA
AGCGCCTGGCCAAGTTCAAGGAAGCGTGTTGGAGGAGCTGTGTGTATCTA
ACGGCAGTGGGGCTCTCGTGGGTGTGTGTGGTTCCCCAGCTGTGGTTTTG
GGACATACGGGAGTGCTGGTTCTACTTAATCGCGCGGATGGCGGTCAATA
TGATAGTTAAAGGCAAGGTGGAAAAAGACGTCCGGAGCGACGACGACGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGATGGGAAAGTGAATGG
TCGTGGAGGAAGGAACGGAAAGACAGGAAAGGGGGGGGAGGAGGAGGGGG
GAAAAGGAAAAGAGGAGGGGGGGGAGGAGGAGGGGCAGCAACAGCAGAAG
GAGGATTATATGAACAGGACGCAGTAAGTGATCTACCCATTTTGGATCCT
GCACTCCACCTTCACGCACGCCCACGCCATCATCGGGGGAAAATACTTGG
GCATGTATATATTCTATGGGATGCTCTTCGTCCTTCAATTTCTGCACGTA
TTCTGAAACGGCCAAGATTTTCAACTACACCTCCCGCTCTCGCCCCTGGG
CGCAGGTGGTCACCGACAGCCTCTTCGTGTGCTTTGCGGTCTCATTTTTC
CTGACCCGGCTGTTTCATCCGCATTGGCACCCTGGTGATGATCGTCCATG
ATCTGTCCGACGTCTTTTTGGGTACGGCTATCCCCTCCAAGCCGTACCTT
CCCCTGTGGTCTTCTACTACGCCTACCAGCTCGGCAATTATCTCCACCTG
TCTCTCTTCCAATTCACCGACACCAAACGGAGCGATTTTTGGGAGATGTT
TCTCCACCACGCCGCCACCCTTTTCCTCATAGCCTTCTCTTGGCTGTCCT
GATGAGGAGGAGACGCCTGTGCCTGACCTTGACCACCCCCTCGTCCTCCT
TCCCTTCCTACGCTGTCTCTTCCCCCCCAAAGTCGCCTTCCTTGTCCTTC
AATGAAAACGGAGGGCGGGAAGGAGGGCAGGTGGTGTTGGACCGACCTGG
AAGCATCGCGCGGGTGCATGCCTACTTCAGGTGGCGACGGCAGGAAGGGA
GGGAGAACAAGCGCCTGGCCAAGTTCAAGGAAGCGTGTTGGAGGAGCTGT
GTGTATCTAACGGCAGTGGGGCTCTCGTGGGTGTGTGTGGTTCCCCAGCT
GTGGTTTTGGGACATACGGGAGTGCTGGTTCTACTTAATCGCGCGGATGG
CGGTCAATATGATAGTTAAAGGCAAGGTGGAAAAAGACGTCCGGAGCGAC
GACGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGATGGGAA
AGTGAATGGTCGTGGAGGAAGGAACGGAAAGACAGGAAAGGGGGGGGAGG
AGGAGGGGGGAAAAGGAAAAGAGGAGGGGGGGGAGGAGGAGGGGCAGCAA
CAGCAGAAGGAGGATTATATGAACAGGACGCAGTAAGTGATCTACCCATT
TTGGATCCTGCACTCCACCTTCACGCACGCCCACGCCATCATCGGGGGAA
AATACTTGGGCATGTATATATTCTATGGGATGCTCTTCGTCCTTCAATTT
CTGCACGTATTCTGAAACGGCCAAGATTTTCAACTACACCTCCCGCTCTC
GCCCCTGGGCGCAGGTGGTCACCGACAGCCTCTTCGTGTGCTTTGCGGTC
TCATTTTTCCTGACCCGGCTGTTTCATCCGCATTGGCACCCTGGTGATGA
TCGTCCATGATCTGTCCGACGTCTTTTTGGGTACGGCTATCCCCTCCAAG
CCGTACCTTCCCCTGTGGTCTTCTACTACGCCTACCAGCTCGGCAATTAT
CTCCACCTGTCTCTCTTCCAATTCACCGACACCAAACGGAGCGATTTTTG
GGAGATGTTTCTCCACCACGCCGCCACCCTTTTCCTCATAGCCTTCTCTT
GGCTGTCCTGATGAGGAGGAGACGCCTGTGCCTGACCTTGACCACCCCCT
CGTCCTCCTTCCCTTCCTACGCTGTCTCTTCCCCCCCAAAGTCGCCTTCC
TTGTCCTTCAATGAAAACGGAGGGCGGGAAGGAGGGCAGGTGGTGTTGGA
CCGACCTGGAAGCATCGCGCGGGTGCATGCCTACTTCAGGTGGCGACGGC
AGGAAGGGAGGGAGAACAAGCGCCTGGCCAAGTTCAAGGAAGCGTGTTGG
AGGAGCTGTGTGTATCTAACGGCAGTGGGGCTCTCGTGGGTGTGTGTGGT
TCCCCAGCTGTGGTTTTGGGACATACGGGAGTGCTGGTTCTACTTAATCG
CGCGGATGGCGGTCAATATGATAGTTAAAGGCAAGGTGGAAAAAGACGTC
CGGAGCGACGACGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGG
GGATGGGAAAGTGAATGGTCGTGGAGGAAGGAACGGAAAGACAGGAAAGG
GGGGGGAGGAGGAGGGGGGAAAAGGAAAAGAGGAGGGGGGGGAGGAGGAG
GGGCAGCAACAGCAGAAGGAGGATTATATGAACAGGACGCAGTAAGTGAT
CTACCCATTTTGGATCCTGCACTCCACCTTCACGCACGCCCACGCCATCA
TCGGGGGAAAATACTTGGGCATGTATATATTCTATGGGATGCTCTTCGTC
CTTCAATTTCTGCACGTATTCTGAAACGGCCAAGATTTTCAACTACACCT
CCCGCTCTCGCCCCTGGGCGCAGGTGGTCACCGACAGCCTCTTCGTGTGC
TTTGCGGTCTCATTTTTCCTGACCCGGCTGTTTCATCCGCATTGGCACCC
TGGTGATGATCGTCCATGATCTGTCCGACGTCTTTTTGGGTACGGCTATC
CCCTCCAAGCCGTACCTTCCCCTGTGGTCTTCTACTACGCCTACCAGCTC
GGCAATTATCTCCACCTGTCTCTCTTCCAATTCACCGACACCAAACGGAG
CGATTTTTGGGAGATGTTTCTCCACCACGCCGCCACCCTTTTCCTCATAG
CCTTCTCTTGGCTGTCCTGATGAGGAGGAGACGCCTGTGCCTGACCTTGA
CCACCCCCTCGTCCTCCTTCCCTTCCTACGCTGTCTCTTCCCCCCCAAAG
TCGCCTTCCTTGTCCTTCAATGAAAACGGAGGGCGGGAAGGAGGGCAGGT
GGTGTTGGACCGACCTGGAAGCATCGCGCGGGTGCATGCCTACTTCAGGT
GGCGACGGCAGGAAGGGAGGGAGAACAAGCGCCTGGCCAAGTTCAAGGAA
GCGTGTTGGAGGAGCTGTGTGTATCTAACGGCAGTGGGGCTCTCGTGGGT
GTGTGTGGTTCCCCAGCTGTGGTTTTGGGACATACGGGAGTGCTGGTTCT
ACTTAATCGCGCGGATGGCGGTCAATATGATAGTTAAAGGCAAGGTGGAA
AAAGACGTCCGGAGCGACGACGACGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGGGGATGGGAAAGTGAATGGTCGTGGAGGAAGGAACGGAAAGA
CAGGAAAGGGGGGGGAGGAGGAGGGGGGAAAAGGAAAAGAGGAGGGGGGG
GAGGAGGAGGGGCAGCAACAGCAGAAGGAGGATTATATGAACAGGACGCA
GTAAGTGATCTACCCATTTTGGATCCTGCACTCCACCTTCACGCACGCCC
ACGCCATCATCGGGGGAAAATACTTGGGCATGTATATATTCTATGGGATG
CTCTTCGTCCTTCAATTTCTGCACGTATTCTGAAACGGCCAAGATTTTCA
ACTACACCTCCCGCTCTCGCCCCTGGGCGCAGGTGGTCACCGACAGCCTC
TTCGTGTGCTTTGCGGTCTCATTTTTCCTGACCCGGCTGTTTCATCCGCA
TTGGCACCCTGGTGATGATCGTCCATGATCTGTCCGACGTCTTTTTGGGT
ACGGCTATCCCCTCCAAGCCGTACCTTCCCCTGTGGTCTTCTACTACGCC
TACCAGCTCGGCAATTATCTCCACCTGTCTCTCTTCCAATTCACCGACAC
CAAACGGAGCGATTTTTGGGAGATGTTTCTCCACCACGCCGCCACCCTTT
TCCTCATAGCCTTCTCTTGGCTGTCCTGATGAGGAGGAGACGCCTGTGCC
TGACCTTGACCACCCCCTCGTCCTCCTTCCCTTCCTACGCTGTCTCTTCC
CCCCCAAAGTCGCCTTCCTTGTCCTTCAATGAAAACGGAGGGCGGGAAGG
AGGGCAGGTGGTGTTGGACCGACCTGGAAGCATCGCGCGGGTGCATGCCT
ACTTCAGGTGGCGACGGCAGGAAGGGAGGGAGAACAAGCGCCTGGCCAAG
TTCAAGGAAGCGTGTTGGAGGAGCTGTGTGTATCTAACGGCAGTGGGGCT
CTCGTGGGTGTGTGTGGTTCCCCAGCTGTGGTTTTGGGACATACGGGAGT
GCTG back to top
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