scaffold_55, scaffold_55 (supercontig) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	scaffold_55
Unique Name	scaffold_55
Type	supercontig
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	108999
Alignment location	jgi.p\|Nanoce1779_2\|350398:27770..32673 +
Alignment location	jgi.p\|Nanoce1779_2\|350398:27770..32673 +
Alignment location	CDS_10373:27969..27973 +
Alignment location	CDS_10373:28086..28191 +
Alignment location	CDS_10373:28377..28450 +
Alignment location	CDS_10373:28541..28604 +
Alignment location	CDS_10373:28973..29194 +
Alignment location	CDS_10373:29380..29457 +
Alignment location	CDS_10373:29910..29957 +
Alignment location	CDS_10373:30032..30109 +
Alignment location	CDS_10373:30214..30343 +
Alignment location	CDS_10373:30492..30607 +
Alignment location	CDS_10373:30781..30864 +
Alignment location	CDS_10373:31037..31183 +
Alignment location	CDS_10373:31385..31459 +
Alignment location	CDS_10373:31592..31666 +
Alignment location	CDS_10373:31820..31910 +
Alignment location	CDS_10373:32017..32079 +
Alignment location	CDS_10373:32176..32255 +
Alignment location	CDS_10373:32344..32565 +
Alignment location	jgi.p\|Nanoce1779_2\|350435:32877..34581 +
Alignment location	jgi.p\|Nanoce1779_2\|350435:32877..34581 +
Alignment location	CDS_10374:32927..33003 +
Alignment location	CDS_10374:33139..33242 +
Alignment location	CDS_10374:33349..33416 +
Alignment location	CDS_10374:33554..33662 +
Alignment location	CDS_10374:33843..33937 +
Alignment location	CDS_10374:34091..34459 +
Alignment location	jgi.p\|Nanoce1779_2\|350517:39267..40171 +
Alignment location	jgi.p\|Nanoce1779_2\|350517:39267..40171 +
Alignment location	CDS_10376:39368..40075 +
Alignment location	jgi.p\|Nanoce1779_2\|350549:41821..43600 +
Alignment location	jgi.p\|Nanoce1779_2\|350549:41821..43600 +
Alignment location	CDS_10378:41938..42648 +
Alignment location	CDS_10378:42879..43154 +
Alignment location	jgi.p\|Nanoce1779_2\|351226:87152..92297 -
Alignment location	jgi.p\|Nanoce1779_2\|351226:87152..92297 -
Alignment location	CDS_10394:91875..92154 -
Alignment location	CDS_10394:91628..91773 -
Alignment location	CDS_10394:91398..91468 -
Alignment location	CDS_10394:91004..91187 -
Alignment location	CDS_10394:90483..90821 -
Alignment location	CDS_10394:90237..90304 -
Alignment location	CDS_10394:89964..90051 -
Alignment location	CDS_10394:89482..89657 -
Alignment location	CDS_10394:89216..89337 -
Alignment location	CDS_10394:89124..89188 -
Alignment location	CDS_10394:88895..88989 -
Alignment location	CDS_10394:88603..88732 -
Alignment location	CDS_10394:88383..88461 -
Alignment location	CDS_10394:88029..88082 -
Alignment location	CDS_10394:87772..87876 -
Alignment location	CDS_10394:87455..87520 -
Alignment location	CDS_10394:87311..87324 -
Alignment location	jgi.p\|Nanoce1779_2\|351308:81618..83339 +
Alignment location	jgi.p\|Nanoce1779_2\|351308:81618..83339 +
Alignment location	CDS_10392:81749..81964 +
Alignment location	CDS_10392:82169..82245 +
Alignment location	CDS_10392:82477..82612 +
Alignment location	CDS_10392:82732..82893 +
Alignment location	jgi.p\|Nanoce1779_2\|569812:6302..7510 -
Alignment location	jgi.p\|Nanoce1779_2\|569812:6302..7510 -
Alignment location	CDS_10367:6302..7510 -
Alignment location	jgi.p\|Nanoce1779_2\|611210:533..2232 -
Alignment location	jgi.p\|Nanoce1779_2\|611210:533..2232 -
Alignment location	CDS_10365:1274..1912 -
Alignment location	jgi.p\|Nanoce1779_2\|611223:16976..17833 +
Alignment location	jgi.p\|Nanoce1779_2\|611223:16976..17833 +
Alignment location	CDS_10370:16993..17101 +
Alignment location	CDS_10370:17304..17461 +
Alignment location	CDS_10370:17596..17781 +
Alignment location	jgi.p\|Nanoce1779_2\|611250:38147..39265 -
Alignment location	jgi.p\|Nanoce1779_2\|611250:38147..39265 -
Alignment location	CDS_10375:38759..39253 -
Alignment location	jgi.p\|Nanoce1779_2\|611252:40444..41558 -
Alignment location	jgi.p\|Nanoce1779_2\|611252:40444..41558 -
Alignment location	CDS_10377:41369..41535 -
Alignment location	CDS_10377:41072..41214 -
Alignment location	CDS_10377:40712..40811 -
Alignment location	CDS_10377:40511..40589 -
Alignment location	jgi.p\|Nanoce1779_2\|611261:42980..43995 +
Alignment location	jgi.p\|Nanoce1779_2\|611261:42980..43995 +
Alignment location	CDS_10379:43195..43830 +
Alignment location	jgi.p\|Nanoce1779_2\|611264:44305..47131 -
Alignment location	jgi.p\|Nanoce1779_2\|611264:44305..47131 -
Alignment location	CDS_10380:46995..47039 -
Alignment location	CDS_10380:46774..46860 -
Alignment location	CDS_10380:46479..46566 -
Alignment location	CDS_10380:46325..46377 -
Alignment location	CDS_10380:46032..46187 -
Alignment location	CDS_10380:45483..45746 -
Alignment location	CDS_10380:45146..45259 -
Alignment location	CDS_10380:44991..45042 -
Alignment location	CDS_10380:44774..44891 -
Alignment location	CDS_10380:44382..44583 -
Alignment location	jgi.p\|Nanoce1779_2\|611270:50605..55229 +
Alignment location	jgi.p\|Nanoce1779_2\|611270:50605..55229 +
Alignment location	CDS_10382:50756..50939 +
Alignment location	CDS_10382:51271..51374 +
Alignment location	CDS_10382:51537..51685 +
Alignment location	CDS_10382:51812..51901 +
Alignment location	CDS_10382:52056..52156 +
Alignment location	CDS_10382:52259..52326 +
Alignment location	CDS_10382:52460..52570 +
Alignment location	CDS_10382:52791..52873 +
Alignment location	CDS_10382:53099..53174 +
Alignment location	CDS_10382:53316..53421 +
Alignment location	CDS_10382:53571..53694 +
Alignment location	CDS_10382:53830..53929 +
Alignment location	CDS_10382:54117..54244 +
Alignment location	CDS_10382:54402..54495 +
Alignment location	CDS_10382:54694..54816 +
Alignment location	CDS_10382:55037..55144 +
Alignment location	jgi.p\|Nanoce1779_2\|611277:62190..64522 +
Alignment location	jgi.p\|Nanoce1779_2\|611277:62190..64522 +
Alignment location	CDS_10384:62408..62629 +
Alignment location	CDS_10384:62888..62995 +
Alignment location	CDS_10384:63114..63193 +
Alignment location	CDS_10384:63380..63497 +
Alignment location	CDS_10384:63659..63781 +
Alignment location	CDS_10384:63946..63993 +
Alignment location	jgi.p\|Nanoce1779_2\|611293:69639..72560 +
Alignment location	jgi.p\|Nanoce1779_2\|611293:69639..72560 +
Alignment location	CDS_10387:69663..70028 +
Alignment location	CDS_10387:70114..70454 +
Alignment location	CDS_10387:70708..70787 +
Alignment location	CDS_10387:70889..71017 +
Alignment location	CDS_10387:71229..71314 +
Alignment location	CDS_10387:71501..71583 +
Alignment location	CDS_10387:71771..71881 +
Alignment location	CDS_10387:71989..72136 +
Alignment location	jgi.p\|Nanoce1779_2\|611300:72479..74091 -
Alignment location	jgi.p\|Nanoce1779_2\|611300:72479..74091 -
Alignment location	CDS_10388:73434..74078 -
Alignment location	jgi.p\|Nanoce1779_2\|611304:74831..76063 +
Alignment location	jgi.p\|Nanoce1779_2\|611304:74831..76063 +
Alignment location	CDS_10389:75016..75144 +
Alignment location	CDS_10389:75537..75773 +
Alignment location	jgi.p\|Nanoce1779_2\|611307:76719..77651 +
Alignment location	jgi.p\|Nanoce1779_2\|611307:76719..77651 +
Alignment location	CDS_10390:76753..76906 +
Alignment location	CDS_10390:76989..77347 +
Alignment location	jgi.p\|Nanoce1779_2\|611310:78391..81349 +
Alignment location	jgi.p\|Nanoce1779_2\|611310:78391..81349 +
Alignment location	CDS_10391:79222..79314 +
Alignment location	CDS_10391:79537..79677 +
Alignment location	CDS_10391:79787..79876 +
Alignment location	CDS_10391:80033..80078 +
Alignment location	CDS_10391:80168..80508 +
Alignment location	jgi.p\|Nanoce1779_2\|611320:84754..86617 +
Alignment location	jgi.p\|Nanoce1779_2\|611320:84754..86617 +
Alignment location	CDS_10393:85164..85344 +
Alignment location	CDS_10393:85481..85815 +
Alignment location	CDS_10393:85832..86053 +
Alignment location	jgi.p\|Nanoce1779_2\|611338:93612..96503 -
Alignment location	jgi.p\|Nanoce1779_2\|611338:93612..96503 -
Alignment location	CDS_10395:95996..96151 -
Alignment location	CDS_10395:95655..95764 -
Alignment location	CDS_10395:95414..95492 -
Alignment location	CDS_10395:95153..95282 -
Alignment location	CDS_10395:94861..94951 -
Alignment location	CDS_10395:94670..94733 -
Alignment location	CDS_10395:94473..94565 -
Alignment location	CDS_10395:94101..94253 -
Alignment location	jgi.p\|Nanoce1779_2\|611346:97210..97508 -
Alignment location	jgi.p\|Nanoce1779_2\|611346:97210..97508 -
Alignment location	CDS_10396:97251..97484 -
Alignment location	jgi.p\|Nanoce1779_2\|611365:106109..107430 -
Alignment location	jgi.p\|Nanoce1779_2\|611365:106109..107430 -
Alignment location	CDS_10399:106972..107264 -
Alignment location	CDS_10399:106374..106704 -
Alignment location	jgi.p\|Nanoce1779_2\|634080:2949..6195 +
Alignment location	jgi.p\|Nanoce1779_2\|634080:2949..6195 +
Alignment location	CDS_10366:3920..6043 +
Alignment location	jgi.p\|Nanoce1779_2\|634082:7969..13603 -
Alignment location	jgi.p\|Nanoce1779_2\|634082:7969..13603 -
Alignment location	CDS_10368:11933..12481 -
Alignment location	CDS_10368:10498..10597 -
Alignment location	CDS_10368:10175..10286 -
Alignment location	CDS_10368:8615..8705 -
Alignment location	jgi.p\|Nanoce1779_2\|634099:100197..105374 -
Alignment location	jgi.p\|Nanoce1779_2\|634099:100197..105374 -
Alignment location	CDS_10398:105058..105333 -
Alignment location	CDS_10398:104776..104914 -
Alignment location	CDS_10398:104591..104657 -
Alignment location	CDS_10398:104306..104426 -
Alignment location	CDS_10398:103995..104164 -
Alignment location	CDS_10398:103777..103861 -
Alignment location	CDS_10398:103583..103681 -
Alignment location	CDS_10398:103292..103427 -
Alignment location	CDS_10398:103035..103160 -
Alignment location	CDS_10398:102876..102929 -
Alignment location	CDS_10398:102601..102776 -
Alignment location	CDS_10398:102298..102407 -
Alignment location	CDS_10398:101893..102032 -
Alignment location	CDS_10398:101624..101771 -
Alignment location	CDS_10398:101480..101543 -
Alignment location	CDS_10398:101236..101354 -
Alignment location	CDS_10398:100842..101106 -
Alignment location	jgi.p\|Nanoce1779_2\|643295:18612..20856 -
Alignment location	jgi.p\|Nanoce1779_2\|643295:18612..20856 -
Alignment location	CDS_10371:20837..20856 -
Alignment location	CDS_10371:20013..20100 -
Alignment location	CDS_10371:19751..19903 -
Alignment location	CDS_10371:19490..19576 -
Alignment location	CDS_10371:19255..19360 -
Alignment location	CDS_10371:19037..19107 -
Alignment location	CDS_10371:18612..18764 -
Alignment location	jgi.p\|Nanoce1779_2\|643302:57015..61881 -
Alignment location	jgi.p\|Nanoce1779_2\|643302:57015..61881 -
Alignment location	CDS_10383:61783..61881 -
Alignment location	CDS_10383:61444..61548 -
Alignment location	CDS_10383:61224..61335 -
Alignment location	CDS_10383:61020..61099 -
Alignment location	CDS_10383:60651..60742 -
Alignment location	CDS_10383:60394..60493 -
Alignment location	CDS_10383:60188..60253 -
Alignment location	CDS_10383:59958..60014 -
Alignment location	CDS_10383:59665..59798 -
Alignment location	CDS_10383:59407..59530 -
Alignment location	CDS_10383:59155..59233 -
Alignment location	CDS_10383:58946..59001 -
Alignment location	CDS_10383:58701..58768 -
Alignment location	CDS_10383:58422..58545 -
Alignment location	CDS_10383:58177..58197 -
Alignment location	CDS_10383:57912..57971 -
Alignment location	CDS_10383:57578..57749 -
Alignment location	CDS_10383:57314..57403 -
Alignment location	CDS_10383:57015..57142 -
Alignment location	jgi.p\|Nanoce1779_2\|662569:22504..25286 +
Alignment location	jgi.p\|Nanoce1779_2\|662569:22504..25286 +
Alignment location	CDS_10372:22504..22583 +
Alignment location	CDS_10372:22845..22936 +
Alignment location	CDS_10372:23133..23347 +
Alignment location	CDS_10372:23532..23664 +
Alignment location	CDS_10372:23777..23895 +
Alignment location	CDS_10372:24027..24158 +
Alignment location	CDS_10372:24234..24578 +
Alignment location	jgi.p\|Nanoce1779_2\|674789:64943..70630 +
Alignment location	jgi.p\|Nanoce1779_2\|674789:64943..70630 +
Alignment location	CDS_10385:64997..65679 +
Alignment location	CDS_10385:65860..65927 +
Alignment location	CDS_10385:66115..67547 +
Alignment location	jgi.p\|Nanoce1779_2\|674790:66622..69240 -
Alignment location	jgi.p\|Nanoce1779_2\|674790:66622..69240 -
Alignment location	CDS_10386:69038..69207 -
Alignment location	CDS_10386:68744..68856 -
Alignment location	CDS_10386:68538..68671 -
Alignment location	CDS_10386:68030..68440 -
Alignment location	jgi.p\|Nanoce1779_2\|350398:27969..32565 +
Alignment location	jgi.p\|Nanoce1779_2\|350435:32927..34459 +
Alignment location	jgi.p\|Nanoce1779_2\|350517:39368..40075 +
Alignment location	jgi.p\|Nanoce1779_2\|350549:41938..43154 +
Alignment location	jgi.p\|Nanoce1779_2\|351226:87311..92154 -
Alignment location	jgi.p\|Nanoce1779_2\|351308:81749..82893 +
Alignment location	jgi.p\|Nanoce1779_2\|569812:6302..7510 -
Alignment location	jgi.p\|Nanoce1779_2\|611210:1274..1912 -
Alignment location	jgi.p\|Nanoce1779_2\|611223:16993..17781 +
Alignment location	jgi.p\|Nanoce1779_2\|611250:38759..39253 -
Alignment location	jgi.p\|Nanoce1779_2\|611252:40511..41535 -
Alignment location	jgi.p\|Nanoce1779_2\|611261:43195..43830 +
Alignment location	jgi.p\|Nanoce1779_2\|611264:44382..47039 -
Alignment location	jgi.p\|Nanoce1779_2\|611270:50756..55144 +
Alignment location	jgi.p\|Nanoce1779_2\|611277:62408..63993 +
Alignment location	jgi.p\|Nanoce1779_2\|611293:69663..72136 +
Alignment location	jgi.p\|Nanoce1779_2\|611300:73434..74078 -
Alignment location	jgi.p\|Nanoce1779_2\|611304:75016..75773 +
Alignment location	jgi.p\|Nanoce1779_2\|611307:76753..77347 +
Alignment location	jgi.p\|Nanoce1779_2\|611310:79222..80508 +
Alignment location	jgi.p\|Nanoce1779_2\|611320:85164..86053 +
Alignment location	jgi.p\|Nanoce1779_2\|611338:94101..96151 -
Alignment location	jgi.p\|Nanoce1779_2\|611346:97251..97484 -
Alignment location	jgi.p\|Nanoce1779_2\|611365:106374..107264 -
Alignment location	jgi.p\|Nanoce1779_2\|634080:3920..6043 +
Alignment location	jgi.p\|Nanoce1779_2\|634082:8615..12481 -
Alignment location	jgi.p\|Nanoce1779_2\|634099:100842..105333 -
Alignment location	jgi.p\|Nanoce1779_2\|643295:18612..20856 -
Alignment location	jgi.p\|Nanoce1779_2\|643302:57015..61881 -
Alignment location	jgi.p\|Nanoce1779_2\|662569:22504..24578 +
Alignment location	jgi.p\|Nanoce1779_2\|674789:64997..67547 +
Alignment location	jgi.p\|Nanoce1779_2\|674790:68030..69207 -
Alignment location	ncniL077:534..107430 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
jgi.p\|Nanoce1779_2\|350398	gene	jgi.p\|Nanoce1779_2\|350398:27770..32673 +
jgi.p\|Nanoce1779_2\|350398	mRNA	jgi.p\|Nanoce1779_2\|350398:27770..32673 +
CDS_10373	CDS	CDS_10373:27969..27973 +
CDS_10373	CDS	CDS_10373:28086..28191 +
CDS_10373	CDS	CDS_10373:28377..28450 +
CDS_10373	CDS	CDS_10373:28541..28604 +
CDS_10373	CDS	CDS_10373:28973..29194 +
CDS_10373	CDS	CDS_10373:29380..29457 +
CDS_10373	CDS	CDS_10373:29910..29957 +
CDS_10373	CDS	CDS_10373:30032..30109 +
CDS_10373	CDS	CDS_10373:30214..30343 +
CDS_10373	CDS	CDS_10373:30492..30607 +
CDS_10373	CDS	CDS_10373:30781..30864 +
CDS_10373	CDS	CDS_10373:31037..31183 +
CDS_10373	CDS	CDS_10373:31385..31459 +
CDS_10373	CDS	CDS_10373:31592..31666 +
CDS_10373	CDS	CDS_10373:31820..31910 +
CDS_10373	CDS	CDS_10373:32017..32079 +
CDS_10373	CDS	CDS_10373:32176..32255 +
CDS_10373	CDS	CDS_10373:32344..32565 +
jgi.p\|Nanoce1779_2\|350435	gene	jgi.p\|Nanoce1779_2\|350435:32877..34581 +
jgi.p\|Nanoce1779_2\|350435	mRNA	jgi.p\|Nanoce1779_2\|350435:32877..34581 +
CDS_10374	CDS	CDS_10374:32927..33003 +
CDS_10374	CDS	CDS_10374:33139..33242 +
CDS_10374	CDS	CDS_10374:33349..33416 +
CDS_10374	CDS	CDS_10374:33554..33662 +
CDS_10374	CDS	CDS_10374:33843..33937 +
CDS_10374	CDS	CDS_10374:34091..34459 +
jgi.p\|Nanoce1779_2\|350517	gene	jgi.p\|Nanoce1779_2\|350517:39267..40171 +
jgi.p\|Nanoce1779_2\|350517	mRNA	jgi.p\|Nanoce1779_2\|350517:39267..40171 +
CDS_10376	CDS	CDS_10376:39368..40075 +
jgi.p\|Nanoce1779_2\|350549	gene	jgi.p\|Nanoce1779_2\|350549:41821..43600 +
jgi.p\|Nanoce1779_2\|350549	mRNA	jgi.p\|Nanoce1779_2\|350549:41821..43600 +
CDS_10378	CDS	CDS_10378:41938..42648 +
CDS_10378	CDS	CDS_10378:42879..43154 +
jgi.p\|Nanoce1779_2\|351226	gene	jgi.p\|Nanoce1779_2\|351226:87152..92297 -
jgi.p\|Nanoce1779_2\|351226	mRNA	jgi.p\|Nanoce1779_2\|351226:87152..92297 -
CDS_10394	CDS	CDS_10394:91875..92154 -
CDS_10394	CDS	CDS_10394:91628..91773 -
CDS_10394	CDS	CDS_10394:91398..91468 -
CDS_10394	CDS	CDS_10394:91004..91187 -
CDS_10394	CDS	CDS_10394:90483..90821 -
CDS_10394	CDS	CDS_10394:90237..90304 -
CDS_10394	CDS	CDS_10394:89964..90051 -
CDS_10394	CDS	CDS_10394:89482..89657 -
CDS_10394	CDS	CDS_10394:89216..89337 -
CDS_10394	CDS	CDS_10394:89124..89188 -
CDS_10394	CDS	CDS_10394:88895..88989 -
CDS_10394	CDS	CDS_10394:88603..88732 -
CDS_10394	CDS	CDS_10394:88383..88461 -
CDS_10394	CDS	CDS_10394:88029..88082 -
CDS_10394	CDS	CDS_10394:87772..87876 -
CDS_10394	CDS	CDS_10394:87455..87520 -
CDS_10394	CDS	CDS_10394:87311..87324 -
jgi.p\|Nanoce1779_2\|351308	gene	jgi.p\|Nanoce1779_2\|351308:81618..83339 +
jgi.p\|Nanoce1779_2\|351308	mRNA	jgi.p\|Nanoce1779_2\|351308:81618..83339 +
CDS_10392	CDS	CDS_10392:81749..81964 +
CDS_10392	CDS	CDS_10392:82169..82245 +
CDS_10392	CDS	CDS_10392:82477..82612 +
CDS_10392	CDS	CDS_10392:82732..82893 +
jgi.p\|Nanoce1779_2\|569812	gene	jgi.p\|Nanoce1779_2\|569812:6302..7510 -
jgi.p\|Nanoce1779_2\|569812	mRNA	jgi.p\|Nanoce1779_2\|569812:6302..7510 -
CDS_10367	CDS	CDS_10367:6302..7510 -
jgi.p\|Nanoce1779_2\|611210	gene	jgi.p\|Nanoce1779_2\|611210:533..2232 -
jgi.p\|Nanoce1779_2\|611210	mRNA	jgi.p\|Nanoce1779_2\|611210:533..2232 -
CDS_10365	CDS	CDS_10365:1274..1912 -
jgi.p\|Nanoce1779_2\|611223	gene	jgi.p\|Nanoce1779_2\|611223:16976..17833 +
jgi.p\|Nanoce1779_2\|611223	mRNA	jgi.p\|Nanoce1779_2\|611223:16976..17833 +
CDS_10370	CDS	CDS_10370:16993..17101 +
CDS_10370	CDS	CDS_10370:17304..17461 +
CDS_10370	CDS	CDS_10370:17596..17781 +
jgi.p\|Nanoce1779_2\|611250	gene	jgi.p\|Nanoce1779_2\|611250:38147..39265 -
jgi.p\|Nanoce1779_2\|611250	mRNA	jgi.p\|Nanoce1779_2\|611250:38147..39265 -
CDS_10375	CDS	CDS_10375:38759..39253 -
jgi.p\|Nanoce1779_2\|611252	gene	jgi.p\|Nanoce1779_2\|611252:40444..41558 -
jgi.p\|Nanoce1779_2\|611252	mRNA	jgi.p\|Nanoce1779_2\|611252:40444..41558 -
CDS_10377	CDS	CDS_10377:41369..41535 -
CDS_10377	CDS	CDS_10377:41072..41214 -
CDS_10377	CDS	CDS_10377:40712..40811 -
CDS_10377	CDS	CDS_10377:40511..40589 -
jgi.p\|Nanoce1779_2\|611261	gene	jgi.p\|Nanoce1779_2\|611261:42980..43995 +
jgi.p\|Nanoce1779_2\|611261	mRNA	jgi.p\|Nanoce1779_2\|611261:42980..43995 +
CDS_10379	CDS	CDS_10379:43195..43830 +
jgi.p\|Nanoce1779_2\|611264	gene	jgi.p\|Nanoce1779_2\|611264:44305..47131 -
jgi.p\|Nanoce1779_2\|611264	mRNA	jgi.p\|Nanoce1779_2\|611264:44305..47131 -
CDS_10380	CDS	CDS_10380:46995..47039 -
CDS_10380	CDS	CDS_10380:46774..46860 -
CDS_10380	CDS	CDS_10380:46479..46566 -
CDS_10380	CDS	CDS_10380:46325..46377 -
CDS_10380	CDS	CDS_10380:46032..46187 -
CDS_10380	CDS	CDS_10380:45483..45746 -
CDS_10380	CDS	CDS_10380:45146..45259 -
CDS_10380	CDS	CDS_10380:44991..45042 -
CDS_10380	CDS	CDS_10380:44774..44891 -
CDS_10380	CDS	CDS_10380:44382..44583 -
jgi.p\|Nanoce1779_2\|611270	gene	jgi.p\|Nanoce1779_2\|611270:50605..55229 +
jgi.p\|Nanoce1779_2\|611270	mRNA	jgi.p\|Nanoce1779_2\|611270:50605..55229 +
CDS_10382	CDS	CDS_10382:50756..50939 +
CDS_10382	CDS	CDS_10382:51271..51374 +
CDS_10382	CDS	CDS_10382:51537..51685 +
CDS_10382	CDS	CDS_10382:51812..51901 +
CDS_10382	CDS	CDS_10382:52056..52156 +
CDS_10382	CDS	CDS_10382:52259..52326 +
CDS_10382	CDS	CDS_10382:52460..52570 +
CDS_10382	CDS	CDS_10382:52791..52873 +
CDS_10382	CDS	CDS_10382:53099..53174 +
CDS_10382	CDS	CDS_10382:53316..53421 +
CDS_10382	CDS	CDS_10382:53571..53694 +
CDS_10382	CDS	CDS_10382:53830..53929 +
CDS_10382	CDS	CDS_10382:54117..54244 +
CDS_10382	CDS	CDS_10382:54402..54495 +
CDS_10382	CDS	CDS_10382:54694..54816 +
CDS_10382	CDS	CDS_10382:55037..55144 +
jgi.p\|Nanoce1779_2\|611277	gene	jgi.p\|Nanoce1779_2\|611277:62190..64522 +
jgi.p\|Nanoce1779_2\|611277	mRNA	jgi.p\|Nanoce1779_2\|611277:62190..64522 +
CDS_10384	CDS	CDS_10384:62408..62629 +
CDS_10384	CDS	CDS_10384:62888..62995 +
CDS_10384	CDS	CDS_10384:63114..63193 +
CDS_10384	CDS	CDS_10384:63380..63497 +
CDS_10384	CDS	CDS_10384:63659..63781 +
CDS_10384	CDS	CDS_10384:63946..63993 +
jgi.p\|Nanoce1779_2\|611293	gene	jgi.p\|Nanoce1779_2\|611293:69639..72560 +
jgi.p\|Nanoce1779_2\|611293	mRNA	jgi.p\|Nanoce1779_2\|611293:69639..72560 +
CDS_10387	CDS	CDS_10387:69663..70028 +
CDS_10387	CDS	CDS_10387:70114..70454 +
CDS_10387	CDS	CDS_10387:70708..70787 +
CDS_10387	CDS	CDS_10387:70889..71017 +
CDS_10387	CDS	CDS_10387:71229..71314 +
CDS_10387	CDS	CDS_10387:71501..71583 +
CDS_10387	CDS	CDS_10387:71771..71881 +
CDS_10387	CDS	CDS_10387:71989..72136 +
jgi.p\|Nanoce1779_2\|611300	gene	jgi.p\|Nanoce1779_2\|611300:72479..74091 -
jgi.p\|Nanoce1779_2\|611300	mRNA	jgi.p\|Nanoce1779_2\|611300:72479..74091 -
CDS_10388	CDS	CDS_10388:73434..74078 -
jgi.p\|Nanoce1779_2\|611304	gene	jgi.p\|Nanoce1779_2\|611304:74831..76063 +
jgi.p\|Nanoce1779_2\|611304	mRNA	jgi.p\|Nanoce1779_2\|611304:74831..76063 +
CDS_10389	CDS	CDS_10389:75016..75144 +
CDS_10389	CDS	CDS_10389:75537..75773 +
jgi.p\|Nanoce1779_2\|611307	gene	jgi.p\|Nanoce1779_2\|611307:76719..77651 +
jgi.p\|Nanoce1779_2\|611307	mRNA	jgi.p\|Nanoce1779_2\|611307:76719..77651 +
CDS_10390	CDS	CDS_10390:76753..76906 +
CDS_10390	CDS	CDS_10390:76989..77347 +
jgi.p\|Nanoce1779_2\|611310	gene	jgi.p\|Nanoce1779_2\|611310:78391..81349 +
jgi.p\|Nanoce1779_2\|611310	mRNA	jgi.p\|Nanoce1779_2\|611310:78391..81349 +
CDS_10391	CDS	CDS_10391:79222..79314 +
CDS_10391	CDS	CDS_10391:79537..79677 +
CDS_10391	CDS	CDS_10391:79787..79876 +
CDS_10391	CDS	CDS_10391:80033..80078 +
CDS_10391	CDS	CDS_10391:80168..80508 +
jgi.p\|Nanoce1779_2\|611320	gene	jgi.p\|Nanoce1779_2\|611320:84754..86617 +
jgi.p\|Nanoce1779_2\|611320	mRNA	jgi.p\|Nanoce1779_2\|611320:84754..86617 +
CDS_10393	CDS	CDS_10393:85164..85344 +
CDS_10393	CDS	CDS_10393:85481..85815 +
CDS_10393	CDS	CDS_10393:85832..86053 +
jgi.p\|Nanoce1779_2\|611338	gene	jgi.p\|Nanoce1779_2\|611338:93612..96503 -
jgi.p\|Nanoce1779_2\|611338	mRNA	jgi.p\|Nanoce1779_2\|611338:93612..96503 -
CDS_10395	CDS	CDS_10395:95996..96151 -
CDS_10395	CDS	CDS_10395:95655..95764 -
CDS_10395	CDS	CDS_10395:95414..95492 -
CDS_10395	CDS	CDS_10395:95153..95282 -
CDS_10395	CDS	CDS_10395:94861..94951 -
CDS_10395	CDS	CDS_10395:94670..94733 -
CDS_10395	CDS	CDS_10395:94473..94565 -
CDS_10395	CDS	CDS_10395:94101..94253 -
jgi.p\|Nanoce1779_2\|611346	gene	jgi.p\|Nanoce1779_2\|611346:97210..97508 -
jgi.p\|Nanoce1779_2\|611346	mRNA	jgi.p\|Nanoce1779_2\|611346:97210..97508 -
CDS_10396	CDS	CDS_10396:97251..97484 -
jgi.p\|Nanoce1779_2\|611365	gene	jgi.p\|Nanoce1779_2\|611365:106109..107430 -
jgi.p\|Nanoce1779_2\|611365	mRNA	jgi.p\|Nanoce1779_2\|611365:106109..107430 -
CDS_10399	CDS	CDS_10399:106972..107264 -
CDS_10399	CDS	CDS_10399:106374..106704 -
jgi.p\|Nanoce1779_2\|634080	gene	jgi.p\|Nanoce1779_2\|634080:2949..6195 +
jgi.p\|Nanoce1779_2\|634080	mRNA	jgi.p\|Nanoce1779_2\|634080:2949..6195 +
CDS_10366	CDS	CDS_10366:3920..6043 +
jgi.p\|Nanoce1779_2\|634082	gene	jgi.p\|Nanoce1779_2\|634082:7969..13603 -
jgi.p\|Nanoce1779_2\|634082	mRNA	jgi.p\|Nanoce1779_2\|634082:7969..13603 -
CDS_10368	CDS	CDS_10368:11933..12481 -
CDS_10368	CDS	CDS_10368:10498..10597 -
CDS_10368	CDS	CDS_10368:10175..10286 -
CDS_10368	CDS	CDS_10368:8615..8705 -
jgi.p\|Nanoce1779_2\|634099	gene	jgi.p\|Nanoce1779_2\|634099:100197..105374 -
jgi.p\|Nanoce1779_2\|634099	mRNA	jgi.p\|Nanoce1779_2\|634099:100197..105374 -
CDS_10398	CDS	CDS_10398:105058..105333 -
CDS_10398	CDS	CDS_10398:104776..104914 -
CDS_10398	CDS	CDS_10398:104591..104657 -
CDS_10398	CDS	CDS_10398:104306..104426 -
CDS_10398	CDS	CDS_10398:103995..104164 -
CDS_10398	CDS	CDS_10398:103777..103861 -
CDS_10398	CDS	CDS_10398:103583..103681 -
CDS_10398	CDS	CDS_10398:103292..103427 -
CDS_10398	CDS	CDS_10398:103035..103160 -
CDS_10398	CDS	CDS_10398:102876..102929 -
CDS_10398	CDS	CDS_10398:102601..102776 -
CDS_10398	CDS	CDS_10398:102298..102407 -
CDS_10398	CDS	CDS_10398:101893..102032 -
CDS_10398	CDS	CDS_10398:101624..101771 -
CDS_10398	CDS	CDS_10398:101480..101543 -
CDS_10398	CDS	CDS_10398:101236..101354 -
CDS_10398	CDS	CDS_10398:100842..101106 -
jgi.p\|Nanoce1779_2\|643295	gene	jgi.p\|Nanoce1779_2\|643295:18612..20856 -
jgi.p\|Nanoce1779_2\|643295	mRNA	jgi.p\|Nanoce1779_2\|643295:18612..20856 -
CDS_10371	CDS	CDS_10371:20837..20856 -
CDS_10371	CDS	CDS_10371:20013..20100 -
CDS_10371	CDS	CDS_10371:19751..19903 -
CDS_10371	CDS	CDS_10371:19490..19576 -
CDS_10371	CDS	CDS_10371:19255..19360 -
CDS_10371	CDS	CDS_10371:19037..19107 -
CDS_10371	CDS	CDS_10371:18612..18764 -
jgi.p\|Nanoce1779_2\|643302	gene	jgi.p\|Nanoce1779_2\|643302:57015..61881 -
jgi.p\|Nanoce1779_2\|643302	mRNA	jgi.p\|Nanoce1779_2\|643302:57015..61881 -
CDS_10383	CDS	CDS_10383:61783..61881 -
CDS_10383	CDS	CDS_10383:61444..61548 -
CDS_10383	CDS	CDS_10383:61224..61335 -
CDS_10383	CDS	CDS_10383:61020..61099 -
CDS_10383	CDS	CDS_10383:60651..60742 -
CDS_10383	CDS	CDS_10383:60394..60493 -
CDS_10383	CDS	CDS_10383:60188..60253 -
CDS_10383	CDS	CDS_10383:59958..60014 -
CDS_10383	CDS	CDS_10383:59665..59798 -
CDS_10383	CDS	CDS_10383:59407..59530 -
CDS_10383	CDS	CDS_10383:59155..59233 -
CDS_10383	CDS	CDS_10383:58946..59001 -
CDS_10383	CDS	CDS_10383:58701..58768 -
CDS_10383	CDS	CDS_10383:58422..58545 -
CDS_10383	CDS	CDS_10383:58177..58197 -
CDS_10383	CDS	CDS_10383:57912..57971 -
CDS_10383	CDS	CDS_10383:57578..57749 -
CDS_10383	CDS	CDS_10383:57314..57403 -
CDS_10383	CDS	CDS_10383:57015..57142 -
jgi.p\|Nanoce1779_2\|662569	gene	jgi.p\|Nanoce1779_2\|662569:22504..25286 +
jgi.p\|Nanoce1779_2\|662569	mRNA	jgi.p\|Nanoce1779_2\|662569:22504..25286 +
CDS_10372	CDS	CDS_10372:22504..22583 +
CDS_10372	CDS	CDS_10372:22845..22936 +
CDS_10372	CDS	CDS_10372:23133..23347 +
CDS_10372	CDS	CDS_10372:23532..23664 +
CDS_10372	CDS	CDS_10372:23777..23895 +
CDS_10372	CDS	CDS_10372:24027..24158 +
CDS_10372	CDS	CDS_10372:24234..24578 +
jgi.p\|Nanoce1779_2\|674789	gene	jgi.p\|Nanoce1779_2\|674789:64943..70630 +
jgi.p\|Nanoce1779_2\|674789	mRNA	jgi.p\|Nanoce1779_2\|674789:64943..70630 +
CDS_10385	CDS	CDS_10385:64997..65679 +
CDS_10385	CDS	CDS_10385:65860..65927 +
CDS_10385	CDS	CDS_10385:66115..67547 +
jgi.p\|Nanoce1779_2\|674790	gene	jgi.p\|Nanoce1779_2\|674790:66622..69240 -
jgi.p\|Nanoce1779_2\|674790	mRNA	jgi.p\|Nanoce1779_2\|674790:66622..69240 -
CDS_10386	CDS	CDS_10386:69038..69207 -
CDS_10386	CDS	CDS_10386:68744..68856 -
CDS_10386	CDS	CDS_10386:68538..68671 -
CDS_10386	CDS	CDS_10386:68030..68440 -
jgi.p\|Nanoce1779_2\|350398	polypeptide	jgi.p\|Nanoce1779_2\|350398:27969..32565 +
jgi.p\|Nanoce1779_2\|350435	polypeptide	jgi.p\|Nanoce1779_2\|350435:32927..34459 +
jgi.p\|Nanoce1779_2\|350517	polypeptide	jgi.p\|Nanoce1779_2\|350517:39368..40075 +
jgi.p\|Nanoce1779_2\|350549	polypeptide	jgi.p\|Nanoce1779_2\|350549:41938..43154 +
jgi.p\|Nanoce1779_2\|351226	polypeptide	jgi.p\|Nanoce1779_2\|351226:87311..92154 -
jgi.p\|Nanoce1779_2\|351308	polypeptide	jgi.p\|Nanoce1779_2\|351308:81749..82893 +
jgi.p\|Nanoce1779_2\|569812	polypeptide	jgi.p\|Nanoce1779_2\|569812:6302..7510 -
jgi.p\|Nanoce1779_2\|611210	polypeptide	jgi.p\|Nanoce1779_2\|611210:1274..1912 -
jgi.p\|Nanoce1779_2\|611223	polypeptide	jgi.p\|Nanoce1779_2\|611223:16993..17781 +
jgi.p\|Nanoce1779_2\|611250	polypeptide	jgi.p\|Nanoce1779_2\|611250:38759..39253 -
jgi.p\|Nanoce1779_2\|611252	polypeptide	jgi.p\|Nanoce1779_2\|611252:40511..41535 -
jgi.p\|Nanoce1779_2\|611261	polypeptide	jgi.p\|Nanoce1779_2\|611261:43195..43830 +
jgi.p\|Nanoce1779_2\|611264	polypeptide	jgi.p\|Nanoce1779_2\|611264:44382..47039 -
jgi.p\|Nanoce1779_2\|611270	polypeptide	jgi.p\|Nanoce1779_2\|611270:50756..55144 +
jgi.p\|Nanoce1779_2\|611277	polypeptide	jgi.p\|Nanoce1779_2\|611277:62408..63993 +
jgi.p\|Nanoce1779_2\|611293	polypeptide	jgi.p\|Nanoce1779_2\|611293:69663..72136 +
jgi.p\|Nanoce1779_2\|611300	polypeptide	jgi.p\|Nanoce1779_2\|611300:73434..74078 -
jgi.p\|Nanoce1779_2\|611304	polypeptide	jgi.p\|Nanoce1779_2\|611304:75016..75773 +
jgi.p\|Nanoce1779_2\|611307	polypeptide	jgi.p\|Nanoce1779_2\|611307:76753..77347 +
jgi.p\|Nanoce1779_2\|611310	polypeptide	jgi.p\|Nanoce1779_2\|611310:79222..80508 +
jgi.p\|Nanoce1779_2\|611320	polypeptide	jgi.p\|Nanoce1779_2\|611320:85164..86053 +
jgi.p\|Nanoce1779_2\|611338	polypeptide	jgi.p\|Nanoce1779_2\|611338:94101..96151 -
jgi.p\|Nanoce1779_2\|611346	polypeptide	jgi.p\|Nanoce1779_2\|611346:97251..97484 -
jgi.p\|Nanoce1779_2\|611365	polypeptide	jgi.p\|Nanoce1779_2\|611365:106374..107264 -
jgi.p\|Nanoce1779_2\|634080	polypeptide	jgi.p\|Nanoce1779_2\|634080:3920..6043 +
jgi.p\|Nanoce1779_2\|634082	polypeptide	jgi.p\|Nanoce1779_2\|634082:8615..12481 -
jgi.p\|Nanoce1779_2\|634099	polypeptide	jgi.p\|Nanoce1779_2\|634099:100842..105333 -
jgi.p\|Nanoce1779_2\|643295	polypeptide	jgi.p\|Nanoce1779_2\|643295:18612..20856 -
jgi.p\|Nanoce1779_2\|643302	polypeptide	jgi.p\|Nanoce1779_2\|643302:57015..61881 -
jgi.p\|Nanoce1779_2\|662569	polypeptide	jgi.p\|Nanoce1779_2\|662569:22504..24578 +
jgi.p\|Nanoce1779_2\|674789	polypeptide	jgi.p\|Nanoce1779_2\|674789:64997..67547 +
jgi.p\|Nanoce1779_2\|674790	polypeptide	jgi.p\|Nanoce1779_2\|674790:68030..69207 -
ncniL077	syntenic_region	ncniL077:534..107430 +

Analyses

This supercontig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gennome assembly for N. oceanica CCMP1779	2018-02-01

Annotated Terms

Homology

Relationships

Sequences

Synonyms

Publications