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Properties
| Property Name | Value |
|---|
| TranscriptId | 611363 |
| Track | FilteredModels2 |
| ProteinId | 611277 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_55 | supercontig | scaffold_55:62190..64522 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10384 ID=mRNA_10384|Name=jgi.p|Nanoce1779_2|611277|organism=Nannochloropsis oceanica|type=mRNA|length=1446bp
AGATAGAGAAAGGCACAGATGCGGGGCCGGCACATGGTAGATGTGACGGG
GACGAAGGAGCCGTGTGTCTCATTTCTTGGCCTGGCGACGCCTGCGTCAC
GACAATCACCATGCAACGGCCGTGTGCAGCCTCCTCCCCCACTAAATGGT
GCAGTACAGTACGCCAGCCATATTAGAGCTCTTCGCCGTGCCCCTGGTCT
GTCACCACTTGCACGGACATGATGACGAGCAGCCCTACCTCGCTTACCCA
TGCCGCTCTCTTTGTGTCCTTTCCTCACTCTTCAAACCCCCCCGAAACTC
AAATGATTAGATACTCCAAGCCCAACATGGCCACCCCCAGACAAACTACG
CCGCTCCTCCGCGCGGGATTGAAGCGGCCCAACATTCTCATCACCGGCAC
GCCTGGCACGGGCAAGACCACTACTGCCCGGTCCATTGCGGAAGCCACCG
GCTTATCCCACCTCAACGTGGGAGACCTTGTCAAAGAGGCCAAGTGCTAT
GAAGGGAAGGACGAGGAGCTCGACACATACATCTTGGACGAGGACAAGCT
GCTAGACCGCATGGAGGTCCTGTTGGCGGACGGGGGACACGTGGTTGATT
ATCACTCCTGCGAGCTCTTCCCCGAACGATGGTTCGATTTGGTGCTGGTC
GTGCGCGCGGACAACGCCACGCTCTTTGACCGGCTCTCGGCCCGCGGATA
CAGCGCACGGAAGCGGAATGAGAACTTAGAATGCGAGATCATGCAGGTGG
TACTCGAAGAGGCCCGTGAAAGCTACGACGAGCCGCTGGTCCACGAAATC
ACCAGCCAAAATGAAGATGATCTGCGAGGAAACGTAGAACGAGTCATGGT
CTGGGTTGAGCAATGGAAGGCGGACTGCGATGCCCGGGTGAAAGAGTTAT
CAGAAATGGAAGAATAAAGCAATATAACAGCAAGTGCAGCAGTTCGTGTG
CTTGAAAGGGACAAGGATGATGATTGAGGGCTTGGAGAGAGGAAGGGAAA
GACAGAAAGCATAAAAGAAAGTTTTAGGAGCTACTTCTTGTCCGCGACGA
ACATGAGCAATAGTTTTCCGATCCAAAGACGCCTGATAATCAAAACAAAA
ATGATGCATGAGCACGACTGACCAACAGCAACAGTGGCAGCAGCTCACAC
CTGACACCCCAGAAACTCAACTCGCGCACCTTTGCTTGTTCTATGCCTTT
GTTTGCGCGCTCATCTGCAGATTCTTCTCGATATCCTTGCAACCACACTT
CAAGAAGACAAGCCAAACAGTCTCCTCTACATGAAACACTTACAGAAGCA
ATGCAACTGTCATAAGACTCTGTGTATTGCCGTCTTCTCACCTCCTTTTG
CTCGTGCGCCGCTTCGCAATTCAAATCCATGTTAACGCCTGCCCGCACCG
TTGAGTTCTCTCGTTCTCCCTTGCGATCCTACACTTCCCTCTCGTG back to topprotein sequence of jgi.p|Nanoce1779_2|611277 >mRNA_10384-protein ID=mRNA_10384-protein|Name=jgi.p|Nanoce1779_2|611277|organism=Nannochloropsis oceanica|type=polypeptide|length=233bp
MMTSSPTSLTHAALFVSFPHSSNPPETQMIRYSKPNMATPRQTTPLLRAG
LKRPNILITGTPGTGKTTTARSIAEATGLSHLNVGDLVKEAKCYEGKDEE
LDTYILDEDKLLDRMEVLLADGGHVVDYHSCELFPERWFDLVLVVRADNA
TLFDRLSARGYSARKRNENLECEIMQVVLEEARESYDEPLVHEITSQNED
DLRGNVERVMVWVEQWKADCDARVKELSEMEE* back to topmRNA from alignment at scaffold_55:62190..64522+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10384 ID=mRNA_10384|Name=jgi.p|Nanoce1779_2|611277|organism=Nannochloropsis oceanica|type=mRNA|length=2333bp|location=Sequence derived from alignment at scaffold_55:62190..64522+ (Nannochloropsis oceanica)
AGATAGAGAAAGGCACAGATGCGGGGCCGGCACATGGTAGATGTGACGGG
GACGAAGGAGCCGTGTGTCTCATTTCTTGGCCTGGCGACGCCTGCGTCAC
GACAATCACCATGCAACGGCCGTGTGCAGCCTCCTCCCCCACTAAATGGT
GCAGTACAGTACGCCAGCCATATTAGAGCTCTTCGCCGTGCCCCTGGTCT
GTCACCACTTGCACGGACATGATGACGAGCAGCCCTACCTCGCTTACCCA
TGCCGCTCTCTTTGTGTCCTTTCCTCACTCTTCAAACCCCCCCGAAACTC
AAATGATTAGATACTCCAAGCCCAACATGGCCACCCCCAGACAAACTACG
CCGCTCCTCCGCGCGGGATTGAAGCGGCCCAACATTCTCATCACCGGCAC
GCCTGGCACGGGCAAGACCACTACTGCCCGGTCCATTGCGGTACGTCCCG
AGCCGGGGGAAGGAAGGAGGACAGAGGGAGACCAGGGACGTGAGGGGGTG
GGGGAAGAGAGAAGAGGCTAAAAACGTCGCCGGGGTCAAAATAAGGAGAC
CTTTACTCGTCATTTTTTGGTTTCTCCCTTACTCAATTCCCCTTCCCCCC
CCCCCTCAAAAAAGTGTGAGAGATCGCCTACGCTTTAATGAGACTCACAT
GTTTCATCCTTCCCTTCATTCCTCCCTCCTTTCCTGTCCACTCCACAGGA
AGCCACCGGCTTATCCCACCTCAACGTGGGAGACCTTGTCAAAGAGGCCA
AGTGCTATGAAGGGAAGGACGAGGAGCTCGACACATACATCTTGGACGAG
GACAAGGTATGCTTCTTCCGTCCCTTCCTTCATCCTTCCCTTTCCTCCCT
CCACATGATCAGCTTAATATCCATGCGCATTCTCTTGCTTACATCTTTCC
TCCTTTTTCTCTTATCTTTATCAGCTGCTAGACCGCATGGAGGTCCTGTT
GGCGGACGGGGGACACGTGGTTGATTATCACTCCTGCGAGCTCTTCCCCG
AACGGTGGGTCCCCCCATTCTTCCCTCTCTCCCTCCCTCCCGGCCTCCTT
TAGGCACTCTTTTTACTTTTACGTCTCGTGTACTTCTCCTCCGCCATTCA
TCCTCCAAATGCCAGTATTTAAATTGTAAACGCACTCTCCCTAATCACTG
TCCCTCCCTCACTCCCTCCCTCCCTCCCCCCCCTTCCCAGATGGTTCGAT
TTGGTGCTGGTCGTGCGCGCGGACAACGCCACGCTCTTTGACCGGCTCTC
GGCCCGCGGATACAGCGCACGGAAGCGGAATGAGAACTTAGAATGCGAGA
TCATGCAGGTGGGGTGGGAGGGAAGAAAGGAGGGAGGGAGGGAGGGAGGG
AAGGGGTGGGCGTGCTCCCACGTCGCGTTGCGTGTGTCCGTCCACACGAA
GTAAGAACATTCAAACAGGCAAGCCAACTCCATCCACCTCTTTCTTCCTC
TCTTTCCTCCCCTCTGCAGGTGGTACTCGAAGAGGCCCGTGAAAGCTACG
ACGAGCCGCTGGTCCACGAAATCACCAGCCAAAATGAAGATGATCTGCGA
GGAAACGTAGAACGAGTCATGGTCTGGGTTGAGCAATGGAAGGTAGGCGT
CGGGTGGATGAGGATATGACTGCTAAGCACATTTCTATTTATCTCCTCTT
CGTCGTTGTCTCGCACACCTTCCATCCCTTTCCTCCTTTCTCCATTCCTA
TTCTTTCCTCTCATCTTTCTTCTCACCACCCCTCCCATCCCCCTCCCTTT
CGACAGGCGGACTGCGATGCCCGGGTGAAAGAGTTATCAGAAATGGAAGA
ATAAAGCAATATAACAGCAAGTGCAGCAGTTCGTGTGCTTGAAAGGGACA
AGGATGATGATTGAGGGCTTGGAGAGAGGAAGGGAAAGACAGAAAGCATA
AAAGAAAGTTTTAGGAGCTACTTCTTGTCCGCGACGAACATGAGCAATAG
TTTTCCGATCCAAAGACGCCTGATAATCAAAACAAAAATGATGCATGAGC
ACGACTGACCAACAGCAACAGTGGCAGCAGCTCACACCTGACACCCCAGA
AACTCAACTCGCGCACCTTTGCTTGTTCTATGCCTTTGTTTGCGCGCTCA
TCTGCAGATTCTTCTCGATATCCTTGCAACCACACTTCAAGAAGACAAGC
CAAACAGTCTCCTCTACATGAAACACTTACAGAAGCAATGCAACTGTCAT
AAGACTCTGTGTATTGCCGTCTTCTCACCTCCTTTTGCTCGTGCGCCGCT
TCGCAATTCAAATCCATGTTAACGCCTGCCCGCACCGTTGAGTTCTCTCG
TTCTCCCTTGCGATCCTACACTTCCCTCTCGTG back to topCoding sequence (CDS) from alignment at scaffold_55:62190..64522+ >mRNA_10384 ID=mRNA_10384|Name=jgi.p|Nanoce1779_2|611277|organism=Nannochloropsis oceanica|type=CDS|length=4194bp|location=Sequence derived from alignment at scaffold_55:62190..64522+ (Nannochloropsis oceanica)
ATGATGACGAGCAGCCCTACCTCGCTTACCCATGCCGCTCTCTTTGTGTC
CTTTCCTCACTCTTCAAACCCCCCCGAAACTCAAATGATTAGATACTCCA
AGCCCAACATGGCCACCCCCAGACAAACTACGCCGCTCCTCCGCGCGGGA
TTGAAGCGGCCCAACATTCTCATCACCGGCACGCCTGGCACGGGCAAGAC
CACTACTGCCCGGTCCATTGCGGAAGCCACCGGCTTATCCCACCTCAACG
TGGGAGACCTTGTCAAAGAGGCCAAGTGCTATGAAGGGAAGGACGAGGAG
CTCGACACATACATCTTGGACGAGGACAAGCTGCTAGACCGCATGGAGGT
CCTGTTGGCGGACGGGGGACACGTGGTTGATTATCACTCCTGCGAGCTCT
TCCCCGAACGATGGTTCGATTTGGTGCTGGTCGTGCGCGCGGACAACGCC
ACGCTCTTTGACCGGCTCTCGGCCCGCGGATACAGCGCACGGAAGCGGAA
TGAGAACTTAGAATGCGAGATCATGCAGGTGGTACTCGAAGAGGCCCGTG
AAAGCTACGACGAGCCGCTGGTCCACGAAATCACCAGCCAAAATGAAGAT
GATCTGCGAGGAAACGTAGAACGAGTCATGGTCTGGGTTGAGCAATGGAA
GGCGGACTGCGATGCCCGGGTGAAAGAGTTATCAGAAATGGAAGAATAAA
TGATGACGAGCAGCCCTACCTCGCTTACCCATGCCGCTCTCTTTGTGTCC
TTTCCTCACTCTTCAAACCCCCCCGAAACTCAAATGATTAGATACTCCAA
GCCCAACATGGCCACCCCCAGACAAACTACGCCGCTCCTCCGCGCGGGAT
TGAAGCGGCCCAACATTCTCATCACCGGCACGCCTGGCACGGGCAAGACC
ACTACTGCCCGGTCCATTGCGGAAGCCACCGGCTTATCCCACCTCAACGT
GGGAGACCTTGTCAAAGAGGCCAAGTGCTATGAAGGGAAGGACGAGGAGC
TCGACACATACATCTTGGACGAGGACAAGCTGCTAGACCGCATGGAGGTC
CTGTTGGCGGACGGGGGACACGTGGTTGATTATCACTCCTGCGAGCTCTT
CCCCGAACGATGGTTCGATTTGGTGCTGGTCGTGCGCGCGGACAACGCCA
CGCTCTTTGACCGGCTCTCGGCCCGCGGATACAGCGCACGGAAGCGGAAT
GAGAACTTAGAATGCGAGATCATGCAGGTGGTACTCGAAGAGGCCCGTGA
AAGCTACGACGAGCCGCTGGTCCACGAAATCACCAGCCAAAATGAAGATG
ATCTGCGAGGAAACGTAGAACGAGTCATGGTCTGGGTTGAGCAATGGAAG
GCGGACTGCGATGCCCGGGTGAAAGAGTTATCAGAAATGGAAGAATAAAT
GATGACGAGCAGCCCTACCTCGCTTACCCATGCCGCTCTCTTTGTGTCCT
TTCCTCACTCTTCAAACCCCCCCGAAACTCAAATGATTAGATACTCCAAG
CCCAACATGGCCACCCCCAGACAAACTACGCCGCTCCTCCGCGCGGGATT
GAAGCGGCCCAACATTCTCATCACCGGCACGCCTGGCACGGGCAAGACCA
CTACTGCCCGGTCCATTGCGGAAGCCACCGGCTTATCCCACCTCAACGTG
GGAGACCTTGTCAAAGAGGCCAAGTGCTATGAAGGGAAGGACGAGGAGCT
CGACACATACATCTTGGACGAGGACAAGCTGCTAGACCGCATGGAGGTCC
TGTTGGCGGACGGGGGACACGTGGTTGATTATCACTCCTGCGAGCTCTTC
CCCGAACGATGGTTCGATTTGGTGCTGGTCGTGCGCGCGGACAACGCCAC
GCTCTTTGACCGGCTCTCGGCCCGCGGATACAGCGCACGGAAGCGGAATG
AGAACTTAGAATGCGAGATCATGCAGGTGGTACTCGAAGAGGCCCGTGAA
AGCTACGACGAGCCGCTGGTCCACGAAATCACCAGCCAAAATGAAGATGA
TCTGCGAGGAAACGTAGAACGAGTCATGGTCTGGGTTGAGCAATGGAAGG
CGGACTGCGATGCCCGGGTGAAAGAGTTATCAGAAATGGAAGAATAAATG
ATGACGAGCAGCCCTACCTCGCTTACCCATGCCGCTCTCTTTGTGTCCTT
TCCTCACTCTTCAAACCCCCCCGAAACTCAAATGATTAGATACTCCAAGC
CCAACATGGCCACCCCCAGACAAACTACGCCGCTCCTCCGCGCGGGATTG
AAGCGGCCCAACATTCTCATCACCGGCACGCCTGGCACGGGCAAGACCAC
TACTGCCCGGTCCATTGCGGAAGCCACCGGCTTATCCCACCTCAACGTGG
GAGACCTTGTCAAAGAGGCCAAGTGCTATGAAGGGAAGGACGAGGAGCTC
GACACATACATCTTGGACGAGGACAAGCTGCTAGACCGCATGGAGGTCCT
GTTGGCGGACGGGGGACACGTGGTTGATTATCACTCCTGCGAGCTCTTCC
CCGAACGATGGTTCGATTTGGTGCTGGTCGTGCGCGCGGACAACGCCACG
CTCTTTGACCGGCTCTCGGCCCGCGGATACAGCGCACGGAAGCGGAATGA
GAACTTAGAATGCGAGATCATGCAGGTGGTACTCGAAGAGGCCCGTGAAA
GCTACGACGAGCCGCTGGTCCACGAAATCACCAGCCAAAATGAAGATGAT
CTGCGAGGAAACGTAGAACGAGTCATGGTCTGGGTTGAGCAATGGAAGGC
GGACTGCGATGCCCGGGTGAAAGAGTTATCAGAAATGGAAGAATAAATGA
TGACGAGCAGCCCTACCTCGCTTACCCATGCCGCTCTCTTTGTGTCCTTT
CCTCACTCTTCAAACCCCCCCGAAACTCAAATGATTAGATACTCCAAGCC
CAACATGGCCACCCCCAGACAAACTACGCCGCTCCTCCGCGCGGGATTGA
AGCGGCCCAACATTCTCATCACCGGCACGCCTGGCACGGGCAAGACCACT
ACTGCCCGGTCCATTGCGGAAGCCACCGGCTTATCCCACCTCAACGTGGG
AGACCTTGTCAAAGAGGCCAAGTGCTATGAAGGGAAGGACGAGGAGCTCG
ACACATACATCTTGGACGAGGACAAGCTGCTAGACCGCATGGAGGTCCTG
TTGGCGGACGGGGGACACGTGGTTGATTATCACTCCTGCGAGCTCTTCCC
CGAACGATGGTTCGATTTGGTGCTGGTCGTGCGCGCGGACAACGCCACGC
TCTTTGACCGGCTCTCGGCCCGCGGATACAGCGCACGGAAGCGGAATGAG
AACTTAGAATGCGAGATCATGCAGGTGGTACTCGAAGAGGCCCGTGAAAG
CTACGACGAGCCGCTGGTCCACGAAATCACCAGCCAAAATGAAGATGATC
TGCGAGGAAACGTAGAACGAGTCATGGTCTGGGTTGAGCAATGGAAGGCG
GACTGCGATGCCCGGGTGAAAGAGTTATCAGAAATGGAAGAATAAATGAT
GACGAGCAGCCCTACCTCGCTTACCCATGCCGCTCTCTTTGTGTCCTTTC
CTCACTCTTCAAACCCCCCCGAAACTCAAATGATTAGATACTCCAAGCCC
AACATGGCCACCCCCAGACAAACTACGCCGCTCCTCCGCGCGGGATTGAA
GCGGCCCAACATTCTCATCACCGGCACGCCTGGCACGGGCAAGACCACTA
CTGCCCGGTCCATTGCGGAAGCCACCGGCTTATCCCACCTCAACGTGGGA
GACCTTGTCAAAGAGGCCAAGTGCTATGAAGGGAAGGACGAGGAGCTCGA
CACATACATCTTGGACGAGGACAAGCTGCTAGACCGCATGGAGGTCCTGT
TGGCGGACGGGGGACACGTGGTTGATTATCACTCCTGCGAGCTCTTCCCC
GAACGATGGTTCGATTTGGTGCTGGTCGTGCGCGCGGACAACGCCACGCT
CTTTGACCGGCTCTCGGCCCGCGGATACAGCGCACGGAAGCGGAATGAGA
ACTTAGAATGCGAGATCATGCAGGTGGTACTCGAAGAGGCCCGTGAAAGC
TACGACGAGCCGCTGGTCCACGAAATCACCAGCCAAAATGAAGATGATCT
GCGAGGAAACGTAGAACGAGTCATGGTCTGGGTTGAGCAATGGAAGGCGG
ACTGCGATGCCCGGGTGAAAGAGTTATCAGAAATGGAAGAATAA back to top
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