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Properties
| Property Name | Value |
|---|
| TranscriptId | 350521 |
| Track | FilteredModels2 |
| ProteinId | 350435 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_55 | supercontig | scaffold_55:32877..34581 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10374 ID=mRNA_10374|Name=jgi.p|Nanoce1779_2|350435|organism=Nannochloropsis oceanica|type=mRNA|length=994bp
ATTCCTTCCTCCCTCCCTCCTTCCCTCCCTCCCTAGGCGAGGAGCTGACC
ATGGACTACTGCTCCTTCACGCACTCAGAAGAAGAGTACCTCGCCGCTGT
GTGCCTATGTGGCTCCCACACTTGCCGCAACTCCTTCCTACACTTTGCCG
GGTATGATATGTTCCATAAAGTCCTCGAACAGAACTACGGCTCCTCCAAG
CGATTCGCCTCCCTCATGCACGCCGGCATTGGGATGAAGGTGTCAGCTTC
AGACCAAGAGACTCTGATCAAGCACGGCATCCAAAAGGCGGCCTTCCAGG
GCGACGAGATGCCGGCCTGGCTCCAGAAATACACGGCCGAGGTTCTTCGT
TTCGCGGAATTCGAAAGGCGCGTCCTCCCCTACAAGCTCATGGAGACTCT
TCCCGACGGCACCCCCTCCTGGTACAATTATTCGACGGCCGATCAAGAGG
CGAGGACGGTCATGGAACAGCGGCTGCAATCCCTCGTCTCCGTCCTCTCT
CAGGTCCACTACATCTTGTCCAAGCAGCACCCTCCCTCCCCCTCCTCCTC
CCTCCCTGCCTCCCCCCACCCCCTGCGGCACCTTGGTGATGAGGAAGTCG
TTACTTACCTCTGGAATGGCGACCACTCCATCGCTAAGACCGCGATGGTA
CGCGCCTCCCTCCACAACACAACCACCCACCTCTTCCTCCCTCCCTCCCT
TCCTGACTCCCTCCCTTCTATTCTTCGGCAACTCCTCATGCACGAACGCC
CACTTCTCCCCGCACTTACCCTCACTCTTTTCCTTCTTCCCTCCCTCCCT
CCCTTCCTCCCTCCCTCTCACAGGCGGCCGCTAGCAGGTACTCGTCCGCC
TTCCTGTCGACGCATTACCTGAATCCCGAGAGCGAATACCACAGGAAGAA
ACGAAGTATGAAAGGGAGGAAGGAAGGAAGGGAGGGAGGGAGGAAGGGGT
GGAAGGTCCCACACAACCGAGACGTCAAACGAGATGCATCACGC back to topprotein sequence of jgi.p|Nanoce1779_2|350435 >mRNA_10374-protein ID=mRNA_10374-protein|Name=jgi.p|Nanoce1779_2|350435|organism=Nannochloropsis oceanica|type=polypeptide|length=274bp
MDYCSFTHSEEEYLAAVCLCGSHTCRNSFLHFAGYDMFHKVLEQNYGSSK
RFASLMHAGIGMKVSASDQETLIKHGIQKAAFQGDEMPAWLQKYTAEVLR
FAEFERRVLPYKLMETLPDGTPSWYNYSTADQEARTVMEQRLQSLVSVLS
QVHYILSKQHPPSPSSSLPASPHPLRHLGDEEVVTYLWNGDHSIAKTAMV
RASLHNTTTHLFLPPSLPDSLPSILRQLLMHERPLLPALTLTLFLLPSLP
PFLPPSHRRPLAGTRPPSCRRIT* back to topmRNA from alignment at scaffold_55:32877..34581+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10374 ID=mRNA_10374|Name=jgi.p|Nanoce1779_2|350435|organism=Nannochloropsis oceanica|type=mRNA|length=1705bp|location=Sequence derived from alignment at scaffold_55:32877..34581+ (Nannochloropsis oceanica)
ATTCCTTCCTCCCTCCCTCCTTCCCTCCCTCCCTAGGCGAGGAGCTGACC
ATGGACTACTGCTCCTTCACGCACTCAGAAGAAGAGTACCTCGCCGCTGT
GTGCCTATGTGGCTCCCACACTTGCCGGTAGGGAGGGAGGAAAGGAGGGA
AGGGTGGAGATGGGAAGGATTAAAGAGAAAATCACGAAAGCGCGAACAAC
AACAAGAAACTGAAGCCTCTTTTTCTTCCTCCCTCCCTTCTTCCCTTCCT
ATCACCGTACAGCAACTCCTTCCTACACTTTGCCGGGTATGATATGTTCC
ATAAAGTCCTCGAACAGAACTACGGCTCCTCCAAGCGATTCGCCTCCCTC
ATGCACGCCGGCATTGGTACGCTCTTCTTCCCTCCCTCTCTCCCTCTCCT
TGCACGGAACACGAGGAAAAAAGTCACACCCTTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCTTTAGGGATGAAGGTGTCAGCTTCAGACCAAGA
GACTCTGATCAAGCACGGCATCCAAAAGGCGGCCTTCCAGGTAAGGAGGG
AGGGAGGGAGGGAAGGGAAGGGAAGGAAGGGAGGGAGGAGGGGAGGGAAA
TTCGAGAGCATCAACAAAAATGCAGAGTCCACGCTCTTCTCACTGATTTT
CCCTCCCTCCCTCCCTCCCTCCCTCAGGGCGACGAGATGCCGGCCTGGCT
CCAGAAATACACGGCCGAGGTTCTTCGTTTCGCGGAATTCGAAAGGCGCG
TCCTCCCCTACAAGCTCATGGAGACTCTTCCCGACGGTGGGTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCTGTCCTCCAAGTCTGCTTGTCTCCCTGTCCTTCTTTATCCTGTTCC
CCCTTTCCAATTCTCAGCCCCGTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCCCCCTCCCTCAGGCACCCCCTCCTGGTACAATTATTCGACGGCCGA
TCAAGAGGCGAGGACGGTCATGGAACAGCGGCTGCAATCCCTCGTCTCCG
TCCTCTCTCAGGTACCCCCCCTCCCTCTCTCCCTCCTTCTTGTGCTTGCA
TCACTGCCAGTCGTCGTTGGAACATGGCTGATACGCTCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTGTCCCAGGTCCACTACATCTTGTCCAAGCAGCACCCTCCCTCC
CCCTCCTCCTCCCTCCCTGCCTCCCCCCACCCCCTGCGGCACCTTGGTGA
TGAGGAAGTCGTTACTTACCTCTGGAATGGCGACCACTCCATCGCTAAGA
CCGCGATGGTACGCGCCTCCCTCCACAACACAACCACCCACCTCTTCCTC
CCTCCCTCCCTTCCTGACTCCCTCCCTTCTATTCTTCGGCAACTCCTCAT
GCACGAACGCCCACTTCTCCCCGCACTTACCCTCACTCTTTTCCTTCTTC
CCTCCCTCCCTCCCTTCCTCCCTCCCTCTCACAGGCGGCCGCTAGCAGGT
ACTCGTCCGCCTTCCTGTCGACGCATTACCTGAATCCCGAGAGCGAATAC
CACAGGAAGAAACGAAGTATGAAAGGGAGGAAGGAAGGAAGGGAGGGAGG
GAGGAAGGGGTGGAAGGTCCCACACAACCGAGACGTCAAACGAGATGCAT
CACGC back to topCoding sequence (CDS) from alignment at scaffold_55:32877..34581+ >mRNA_10374 ID=mRNA_10374|Name=jgi.p|Nanoce1779_2|350435|organism=Nannochloropsis oceanica|type=CDS|length=4932bp|location=Sequence derived from alignment at scaffold_55:32877..34581+ (Nannochloropsis oceanica)
ATGGACTACTGCTCCTTCACGCACTCAGAAGAAGAGTACCTCGCCGCTGT
GTGCCTATGTGGCTCCCACACTTGCCGCAACTCCTTCCTACACTTTGCCG
GGTATGATATGTTCCATAAAGTCCTCGAACAGAACTACGGCTCCTCCAAG
CGATTCGCCTCCCTCATGCACGCCGGCATTGGGATGAAGGTGTCAGCTTC
AGACCAAGAGACTCTGATCAAGCACGGCATCCAAAAGGCGGCCTTCCAGG
GCGACGAGATGCCGGCCTGGCTCCAGAAATACACGGCCGAGGTTCTTCGT
TTCGCGGAATTCGAAAGGCGCGTCCTCCCCTACAAGCTCATGGAGACTCT
TCCCGACGGCACCCCCTCCTGGTACAATTATTCGACGGCCGATCAAGAGG
CGAGGACGGTCATGGAACAGCGGCTGCAATCCCTCGTCTCCGTCCTCTCT
CAGGTCCACTACATCTTGTCCAAGCAGCACCCTCCCTCCCCCTCCTCCTC
CCTCCCTGCCTCCCCCCACCCCCTGCGGCACCTTGGTGATGAGGAAGTCG
TTACTTACCTCTGGAATGGCGACCACTCCATCGCTAAGACCGCGATGGTA
CGCGCCTCCCTCCACAACACAACCACCCACCTCTTCCTCCCTCCCTCCCT
TCCTGACTCCCTCCCTTCTATTCTTCGGCAACTCCTCATGCACGAACGCC
CACTTCTCCCCGCACTTACCCTCACTCTTTTCCTTCTTCCCTCCCTCCCT
CCCTTCCTCCCTCCCTCTCACAGGCGGCCGCTAGCAGGTACTCGTCCGCC
TTCCTGTCGACGCATTACCTGAATGGACTACTGCTCCTTCACGCACTCAG
AAGAAGAGTACCTCGCCGCTGTGTGCCTATGTGGCTCCCACACTTGCCGC
AACTCCTTCCTACACTTTGCCGGGTATGATATGTTCCATAAAGTCCTCGA
ACAGAACTACGGCTCCTCCAAGCGATTCGCCTCCCTCATGCACGCCGGCA
TTGGGATGAAGGTGTCAGCTTCAGACCAAGAGACTCTGATCAAGCACGGC
ATCCAAAAGGCGGCCTTCCAGGGCGACGAGATGCCGGCCTGGCTCCAGAA
ATACACGGCCGAGGTTCTTCGTTTCGCGGAATTCGAAAGGCGCGTCCTCC
CCTACAAGCTCATGGAGACTCTTCCCGACGGCACCCCCTCCTGGTACAAT
TATTCGACGGCCGATCAAGAGGCGAGGACGGTCATGGAACAGCGGCTGCA
ATCCCTCGTCTCCGTCCTCTCTCAGGTCCACTACATCTTGTCCAAGCAGC
ACCCTCCCTCCCCCTCCTCCTCCCTCCCTGCCTCCCCCCACCCCCTGCGG
CACCTTGGTGATGAGGAAGTCGTTACTTACCTCTGGAATGGCGACCACTC
CATCGCTAAGACCGCGATGGTACGCGCCTCCCTCCACAACACAACCACCC
ACCTCTTCCTCCCTCCCTCCCTTCCTGACTCCCTCCCTTCTATTCTTCGG
CAACTCCTCATGCACGAACGCCCACTTCTCCCCGCACTTACCCTCACTCT
TTTCCTTCTTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCTCACAGGCGGC
CGCTAGCAGGTACTCGTCCGCCTTCCTGTCGACGCATTACCTGAATGGAC
TACTGCTCCTTCACGCACTCAGAAGAAGAGTACCTCGCCGCTGTGTGCCT
ATGTGGCTCCCACACTTGCCGCAACTCCTTCCTACACTTTGCCGGGTATG
ATATGTTCCATAAAGTCCTCGAACAGAACTACGGCTCCTCCAAGCGATTC
GCCTCCCTCATGCACGCCGGCATTGGGATGAAGGTGTCAGCTTCAGACCA
AGAGACTCTGATCAAGCACGGCATCCAAAAGGCGGCCTTCCAGGGCGACG
AGATGCCGGCCTGGCTCCAGAAATACACGGCCGAGGTTCTTCGTTTCGCG
GAATTCGAAAGGCGCGTCCTCCCCTACAAGCTCATGGAGACTCTTCCCGA
CGGCACCCCCTCCTGGTACAATTATTCGACGGCCGATCAAGAGGCGAGGA
CGGTCATGGAACAGCGGCTGCAATCCCTCGTCTCCGTCCTCTCTCAGGTC
CACTACATCTTGTCCAAGCAGCACCCTCCCTCCCCCTCCTCCTCCCTCCC
TGCCTCCCCCCACCCCCTGCGGCACCTTGGTGATGAGGAAGTCGTTACTT
ACCTCTGGAATGGCGACCACTCCATCGCTAAGACCGCGATGGTACGCGCC
TCCCTCCACAACACAACCACCCACCTCTTCCTCCCTCCCTCCCTTCCTGA
CTCCCTCCCTTCTATTCTTCGGCAACTCCTCATGCACGAACGCCCACTTC
TCCCCGCACTTACCCTCACTCTTTTCCTTCTTCCCTCCCTCCCTCCCTTC
CTCCCTCCCTCTCACAGGCGGCCGCTAGCAGGTACTCGTCCGCCTTCCTG
TCGACGCATTACCTGAATGGACTACTGCTCCTTCACGCACTCAGAAGAAG
AGTACCTCGCCGCTGTGTGCCTATGTGGCTCCCACACTTGCCGCAACTCC
TTCCTACACTTTGCCGGGTATGATATGTTCCATAAAGTCCTCGAACAGAA
CTACGGCTCCTCCAAGCGATTCGCCTCCCTCATGCACGCCGGCATTGGGA
TGAAGGTGTCAGCTTCAGACCAAGAGACTCTGATCAAGCACGGCATCCAA
AAGGCGGCCTTCCAGGGCGACGAGATGCCGGCCTGGCTCCAGAAATACAC
GGCCGAGGTTCTTCGTTTCGCGGAATTCGAAAGGCGCGTCCTCCCCTACA
AGCTCATGGAGACTCTTCCCGACGGCACCCCCTCCTGGTACAATTATTCG
ACGGCCGATCAAGAGGCGAGGACGGTCATGGAACAGCGGCTGCAATCCCT
CGTCTCCGTCCTCTCTCAGGTCCACTACATCTTGTCCAAGCAGCACCCTC
CCTCCCCCTCCTCCTCCCTCCCTGCCTCCCCCCACCCCCTGCGGCACCTT
GGTGATGAGGAAGTCGTTACTTACCTCTGGAATGGCGACCACTCCATCGC
TAAGACCGCGATGGTACGCGCCTCCCTCCACAACACAACCACCCACCTCT
TCCTCCCTCCCTCCCTTCCTGACTCCCTCCCTTCTATTCTTCGGCAACTC
CTCATGCACGAACGCCCACTTCTCCCCGCACTTACCCTCACTCTTTTCCT
TCTTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCTCACAGGCGGCCGCTAG
CAGGTACTCGTCCGCCTTCCTGTCGACGCATTACCTGAATGGACTACTGC
TCCTTCACGCACTCAGAAGAAGAGTACCTCGCCGCTGTGTGCCTATGTGG
CTCCCACACTTGCCGCAACTCCTTCCTACACTTTGCCGGGTATGATATGT
TCCATAAAGTCCTCGAACAGAACTACGGCTCCTCCAAGCGATTCGCCTCC
CTCATGCACGCCGGCATTGGGATGAAGGTGTCAGCTTCAGACCAAGAGAC
TCTGATCAAGCACGGCATCCAAAAGGCGGCCTTCCAGGGCGACGAGATGC
CGGCCTGGCTCCAGAAATACACGGCCGAGGTTCTTCGTTTCGCGGAATTC
GAAAGGCGCGTCCTCCCCTACAAGCTCATGGAGACTCTTCCCGACGGCAC
CCCCTCCTGGTACAATTATTCGACGGCCGATCAAGAGGCGAGGACGGTCA
TGGAACAGCGGCTGCAATCCCTCGTCTCCGTCCTCTCTCAGGTCCACTAC
ATCTTGTCCAAGCAGCACCCTCCCTCCCCCTCCTCCTCCCTCCCTGCCTC
CCCCCACCCCCTGCGGCACCTTGGTGATGAGGAAGTCGTTACTTACCTCT
GGAATGGCGACCACTCCATCGCTAAGACCGCGATGGTACGCGCCTCCCTC
CACAACACAACCACCCACCTCTTCCTCCCTCCCTCCCTTCCTGACTCCCT
CCCTTCTATTCTTCGGCAACTCCTCATGCACGAACGCCCACTTCTCCCCG
CACTTACCCTCACTCTTTTCCTTCTTCCCTCCCTCCCTCCCTTCCTCCCT
CCCTCTCACAGGCGGCCGCTAGCAGGTACTCGTCCGCCTTCCTGTCGACG
CATTACCTGAATGGACTACTGCTCCTTCACGCACTCAGAAGAAGAGTACC
TCGCCGCTGTGTGCCTATGTGGCTCCCACACTTGCCGCAACTCCTTCCTA
CACTTTGCCGGGTATGATATGTTCCATAAAGTCCTCGAACAGAACTACGG
CTCCTCCAAGCGATTCGCCTCCCTCATGCACGCCGGCATTGGGATGAAGG
TGTCAGCTTCAGACCAAGAGACTCTGATCAAGCACGGCATCCAAAAGGCG
GCCTTCCAGGGCGACGAGATGCCGGCCTGGCTCCAGAAATACACGGCCGA
GGTTCTTCGTTTCGCGGAATTCGAAAGGCGCGTCCTCCCCTACAAGCTCA
TGGAGACTCTTCCCGACGGCACCCCCTCCTGGTACAATTATTCGACGGCC
GATCAAGAGGCGAGGACGGTCATGGAACAGCGGCTGCAATCCCTCGTCTC
CGTCCTCTCTCAGGTCCACTACATCTTGTCCAAGCAGCACCCTCCCTCCC
CCTCCTCCTCCCTCCCTGCCTCCCCCCACCCCCTGCGGCACCTTGGTGAT
GAGGAAGTCGTTACTTACCTCTGGAATGGCGACCACTCCATCGCTAAGAC
CGCGATGGTACGCGCCTCCCTCCACAACACAACCACCCACCTCTTCCTCC
CTCCCTCCCTTCCTGACTCCCTCCCTTCTATTCTTCGGCAACTCCTCATG
CACGAACGCCCACTTCTCCCCGCACTTACCCTCACTCTTTTCCTTCTTCC
CTCCCTCCCTCCCTTCCTCCCTCCCTCTCACAGGCGGCCGCTAGCAGGTA
CTCGTCCGCCTTCCTGTCGACGCATTACCTGA back to top
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