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Properties
Property Name | Value |
TranscriptId | 611309 |
Track | FilteredModels2 |
ProteinId | 611223 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_55 | supercontig | scaffold_55:16976..17833 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10370 ID=mRNA_10370|Name=jgi.p|Nanoce1779_2|611223|organism=Nannochloropsis oceanica|type=mRNA|length=522bp CAGGCGTGAGAAGGACCATGGCGTCTTCCCTCTCTGTTGTTGTCAAGAGG GCAGGCGGCGCGGCCTTGGCCCGTCCTCTGTCCCACGAAGTCAGGAGGAA TTTTACGCGTTCGGCGGCGGTACTAGGCGGTGGTGGCCATCACCCCGGCC CTCCCCTGCAACCATTTAAGCGTACGGCCATGCCTGAGGGACCGCTATTT GAGGAGCACGAGTTGATTTGGGACGATCGGGTGGCGGCGGAGATGTGTCT GGATTTCGACGCGAGCTTTGTGCCCAAGGGAGAGGCTGTGCGATGGTGGC TAGGCGGCTTCGGCTTCTTCTTCTCTCTGCTCGGCCTCGTCTCCCTCACG GACCCAGGGGCAGCCAATCCGTGCGTGAACAAGACTGAGACGATGCCAGA CCTTGGCCTCTCGTTCATCCAGATGGGAGGGAGTCCGGCGGCGGAGGAAG AGGAGGCGGAGGAGGAGTAGACGGAGGGAGGAAGGAGAGGGAGGAGGGTG TTTGTGTCTAGGTAGGGAGGGT back to topprotein sequence of jgi.p|Nanoce1779_2|611223 >mRNA_10370-protein ID=mRNA_10370-protein|Name=jgi.p|Nanoce1779_2|611223|organism=Nannochloropsis oceanica|type=polypeptide|length=151bp MASSLSVVVKRAGGAALARPLSHEVRRNFTRSAAVLGGGGHHPGPPLQPF KRTAMPEGPLFEEHELIWDDRVAAEMCLDFDASFVPKGEAVRWWLGGFGF FFSLLGLVSLTDPGAANPCVNKTETMPDLGLSFIQMGGSPAAEEEEAEEE * back to topmRNA from alignment at scaffold_55:16976..17833+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10370 ID=mRNA_10370|Name=jgi.p|Nanoce1779_2|611223|organism=Nannochloropsis oceanica|type=mRNA|length=858bp|location=Sequence derived from alignment at scaffold_55:16976..17833+ (Nannochloropsis oceanica) CAGGCGTGAGAAGGACCATGGCGTCTTCCCTCTCTGTTGTTGTCAAGAGG
GCAGGCGGCGCGGCCTTGGCCCGTCCTCTGTCCCACGAAGTCAGGAGGAA
TTTTACGCGTTCGGCGGCGGTACTAGGTGGGTTGTGTGTGGAGTGGAAGG
CGGACAGGAAGAAAGGGAAGCAGGGGAGGCATGTACTGGGATGTAATTGT
ACTCAAGAGAAAGTTCGATAACGAGAAGGGGTGGACTTGAAAAGGGCAGG
TGGAGAATGAATCGACTGTCACGATCCGAACGTACACGACTCACCTCCCC
CTCTTTCCCCCCCCTTGCCCACAATCAGGCGGTGGTGGCCATCACCCCGG
CCCTCCCCTGCAACCATTTAAGCGTACGGCCATGCCTGAGGGACCGCTAT
TTGAGGAGCACGAGTTGATTTGGGACGATCGGGTGGCGGCGGAGATGTGT
CTGGATTTCGACGCGAGCTTTGTGCCCAAGGGAGAGGTGAGGGAGGGAGG
GGGAGGGAAGGGAAAAGCGAGAGCAAAGAGAGATAATTTGAGAAGGCTTT
TATCTCGTGTTGACCTTCTTGTAATGCTTAAACCTGCTCTCTTGTCCGTT
TCCCCTTGCATGACCGGTAGGCTGTGCGATGGTGGCTAGGCGGCTTCGGC
TTCTTCTTCTCTCTGCTCGGCCTCGTCTCCCTCACGGACCCAGGGGCAGC
CAATCCGTGCGTGAACAAGACTGAGACGATGCCAGACCTTGGCCTCTCGT
TCATCCAGATGGGAGGGAGTCCGGCGGCGGAGGAAGAGGAGGCGGAGGAG
GAGTAGACGGAGGGAGGAAGGAGAGGGAGGAGGGTGTTTGTGTCTAGGTA
GGGAGGGT back to topCoding sequence (CDS) from alignment at scaffold_55:16976..17833+ >mRNA_10370 ID=mRNA_10370|Name=jgi.p|Nanoce1779_2|611223|organism=Nannochloropsis oceanica|type=CDS|length=1359bp|location=Sequence derived from alignment at scaffold_55:16976..17833+ (Nannochloropsis oceanica) ATGGCGTCTTCCCTCTCTGTTGTTGTCAAGAGGGCAGGCGGCGCGGCCTT GGCCCGTCCTCTGTCCCACGAAGTCAGGAGGAATTTTACGCGTTCGGCGG CGGTACTAGGCGGTGGTGGCCATCACCCCGGCCCTCCCCTGCAACCATTT AAGCGTACGGCCATGCCTGAGGGACCGCTATTTGAGGAGCACGAGTTGAT TTGGGACGATCGGGTGGCGGCGGAGATGTGTCTGGATTTCGACGCGAGCT TTGTGCCCAAGGGAGAGGCTGTGCGATGGTGGCTAGGCGGCTTCGGCTTC TTCTTCTCTCTGCTCGGCCTCGTCTCCCTCACGGACCCAGGGGCAGCCAA TCCGTGCGTGAACAAGACTGAGACGATGCCAGACCTTGGCCTCTCGTTCA TCCAGATGGGAGGGAGTCCGGCGGCGGAGGAAGAGGAGGCGGAGGAGGAG TAGATGGCGTCTTCCCTCTCTGTTGTTGTCAAGAGGGCAGGCGGCGCGGC CTTGGCCCGTCCTCTGTCCCACGAAGTCAGGAGGAATTTTACGCGTTCGG CGGCGGTACTAGGCGGTGGTGGCCATCACCCCGGCCCTCCCCTGCAACCA TTTAAGCGTACGGCCATGCCTGAGGGACCGCTATTTGAGGAGCACGAGTT GATTTGGGACGATCGGGTGGCGGCGGAGATGTGTCTGGATTTCGACGCGA GCTTTGTGCCCAAGGGAGAGGCTGTGCGATGGTGGCTAGGCGGCTTCGGC TTCTTCTTCTCTCTGCTCGGCCTCGTCTCCCTCACGGACCCAGGGGCAGC CAATCCGTGCGTGAACAAGACTGAGACGATGCCAGACCTTGGCCTCTCGT TCATCCAGATGGGAGGGAGTCCGGCGGCGGAGGAAGAGGAGGCGGAGGAG GAGTAGATGGCGTCTTCCCTCTCTGTTGTTGTCAAGAGGGCAGGCGGCGC GGCCTTGGCCCGTCCTCTGTCCCACGAAGTCAGGAGGAATTTTACGCGTT CGGCGGCGGTACTAGGCGGTGGTGGCCATCACCCCGGCCCTCCCCTGCAA CCATTTAAGCGTACGGCCATGCCTGAGGGACCGCTATTTGAGGAGCACGA GTTGATTTGGGACGATCGGGTGGCGGCGGAGATGTGTCTGGATTTCGACG CGAGCTTTGTGCCCAAGGGAGAGGCTGTGCGATGGTGGCTAGGCGGCTTC GGCTTCTTCTTCTCTCTGCTCGGCCTCGTCTCCCTCACGGACCCAGGGGC AGCCAATCCGTGCGTGAACAAGACTGAGACGATGCCAGACCTTGGCCTCT CGTTCATCCAGATGGGAGGGAGTCCGGCGGCGGAGGAAGAGGAGGCGGAG GAGGAGTAG back to top
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