NO09G03550, NO09G03550 (gene) Nannochloropsis oceanica

Overview
NameNO09G03550
Unique NameNO09G03550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3439
Alignment locationchr9:1014512..1017950 -

Link to JBrowse

Properties
Property NameValue
DescriptionTransmembrane protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1014512..1017950 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO09G03550 vs. NCBI_GenBank
Match: EWM27447.1 (transmembrane protein [Nannochloropsis gaditana])

HSP 1 Score: 624.8 bits (1610), Expect = 1.900e-175
Identity = 290/371 (78.17%), Postives = 333/371 (89.76%), Query Frame = 0
Query:   12 QEHQPALDKHEAWPDPEEEGKDGNYRGYTMDVTASAVEEMQVGEENVQWAYRLIQLLDADTRLFLADGLLRKVEAFVATGTGPLSQWARRVMVIPENAKRLAELRRRVEVCRQAARDMRSDDWHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFVRDAVLHLYGCDASEENLIILSGASMPESEITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRSDPFYANYLVPYCLHLAHTKGWAVPDVPAFEVDRDCTTAKAWRQ 383
            QE    +++H+ WPDPE+EG+DG+YRGYTM+V A+  + +QVGEENVQ AYRL+QLLDADTRLFLAD LL+K+EAF  TGTGP ++WA  VM   E+++RL ELRRRV+VCRQAARDM+S+DW LAHTE+GI+TF R+DEGDNTLAWRTHGEIEDCPVVSQLAVLRE DHYH WIPLMDKSKVVKRLGKIEQM+WFRVAG G+PFVRDAVLHLYGCDASEE+LIILSGAS+PE EIT+ M VRPPKKKWNHARVDIKYFSIQL+ILSPTH KIDLIY LDVK+  VPQ +INYFSKF CGWVIWFLFQEMRR+QTDPV +PTAQLMRS+PFYANYLVPYCL+LA+TKGW VP VPAFE+++DC +A+AWRQ
Sbjct:    8 QERISFVNQHQPWPDPEKEGRDGSYRGYTMEVAANETQALQVGEENVQVAYRLVQLLDADTRLFLADDLLQKIEAFTRTGTGPQAEWAMHVMARSEDSQRLEELRRRVQVCRQAARDMQSEDWELAHTEEGIQTFLRRDEGDNTLAWRTHGEIEDCPVVSQLAVLREADHYHDWIPLMDKSKVVKRLGKIEQMLWFRVAGRGLPFVRDAVLHLYGCDASEEDLIILSGASIPEDEITESMGVRPPKKKWNHARVDIKYFSIQLRILSPTHTKIDLIYKLDVKIKFVPQKVINYFSKFLCGWVIWFLFQEMRRLQTDPVESPTAQLMRSEPFYANYLVPYCLNLAYTKGWEVPPVPAFEINKDCASAQAWRQ 378          
BLAST of NO09G03550 vs. NCBI_GenBank
Match: CBJ32035.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 173.3 bits (438), Expect = 1.600e-39
Identity = 104/324 (32.10%), Postives = 176/324 (54.32%), Query Frame = 0
Query:   65 IQLLDADTRLFLADGLLRKVEAFVATG--TGPLSQWARRVMVIPENAKRLAELRRRVEVCRQAARDMRSDDWHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFVRDAVLHLYGCDA-SEENLIILSGASMPESEITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRSDPFYANYLVPYCLHLAHTKGWAVPD-----VPAFEVDRDCTTAKAW 381
            +QL     RL +A  LL  V+ ++A+G   G         ++  E      E+R+R   C+ +  D +S DW +A T  GI TF + D  D +L  + HG ++D  V+ QLAV+RE D +++W+P  D SK++KRLG +E +V+F ++  G+   RD VLH YGCD+  E   I++ G S+   E+ + ++V P  K W HAR+D++ F  ++++LSPT  +  ++ N+D K   VPQ+++N+  +   G  ++ L Q  + I+ D  +    +++    FY  +L P        +GW V +      PA ++  + T  +AW
Sbjct:   24 VQLCREQARLLVAGRLLAAVDRYLASGQHAGRQEVKEAHALLAGELKPLFDEVRQRAAECQSSLDDWQSPDWLVAQTFMGITTFYKVDP-DGSLWIKMHGTMDDVTVMDQLAVVREVDLFNKWVPFCDTSKLLKRLGIVELLVYFSMSIPGVG--RDCVLHAYGCDSVLETGCILIQGRSV--EEVPEGVEV-PQVKGWRHARMDVRAFRAKIEVLSPTSARTSIVANVDPKAP-VPQSVVNFVVRKMAGMFLYCLKQTAKCIRADEGNCHRRRIVEDKAFYKGWLFPRFERFYRRQGWTVDEELGGGEPASKLSDEPTGGRAW 340          
BLAST of NO09G03550 vs. NCBI_GenBank
Match: EWM27457.1 (hypothetical protein Naga_100107g9 [Nannochloropsis gaditana])

HSP 1 Score: 172.2 bits (435), Expect = 3.500e-39
Identity = 73/93 (78.49%), Postives = 85/93 (91.40%), Query Frame = 0
Query:  290 LDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRSDPFYANYLVPYCLHLAHTKGWAVPDVPAFEVDRDCTTAKAWRQ 383
            LDVK+  VPQ +INYFSKF CGWVIWFLFQEMRR+QTDPV +PTAQLMRS+PFYANYLVPYCL+LA+TKGW VP VPAFE+++DC +A+AWRQ
Sbjct:    4 LDVKIKFVPQKVINYFSKFLCGWVIWFLFQEMRRLQTDPVESPTAQLMRSEPFYANYLVPYCLNLAYTKGWEVPPVPAFEINKDCASAQAWRQ 96          
BLAST of NO09G03550 vs. NCBI_GenBank
Match: EWM25463.1 (START-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 133.7 bits (335), Expect = 1.400e-27
Identity = 99/328 (30.18%), Postives = 162/328 (49.39%), Query Frame = 0
Query:   42 DVTASAVEEMQVGEENVQWAYRLIQLLDADTRLFLADGLLRKVEAFVATGTGPLSQW---ARRVMVIPENAKRLAELRRRVEVCRQAARDMRS-DDWHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFVRDAVLHLYGCDASEENLIILSGASMPESEITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQT--DPVHNPTAQLMRSDPFYANYLVPYCLHLAHTKGWAVP 364
            D    A+ + ++ +EN       IQLL  D RL +A+ L +K+EAFV     PLSQ     RR M      ++LA L RR   C +AA D+ S ++W LA    G +TF R   G+     +  GE E   +  QL V+RE   YHRW P +  S +V    +++ MV F +      F RD ++  Y CD SE+++I++ G S+  ++    + +      W   R+ I  F  Q+++      K+ +   +D + T +PQ++IN+  +   G +++ L +  +R+    D +     Q++R DP+Y  + +P  L     KGW  P
Sbjct:   64 DFDVPALYKTEITDENASRILAYIQLLTEDDRLMIAEDLRKKLEAFVK--EQPLSQVKENIRRQMQESPLQEQLALLSRRGVECLEAAEDLASRENWTLAFRTFGFDTFVR-PVGEQMYV-KVEGEQEGTSIFDQLLVVREAAMYHRWGPFVCSSALVHSFKQLDLMVTFEL--NAPLFHRDCLMRGYACDYSEKDMILICGDSVVPADY-PSLGLSTEPNGWLFKRMSITRFRCQVQLRGVNKGKVIMAALIDPR-TALPQSVINFCLQRIVGVLLYLLLRTAQRLNQAGDKLGADFLQVIRRDPYYFRHCLPRILWYCQQKGWEYP 383          
BLAST of NO09G03550 vs. NCBI_GenBank
Match: GAX11088.1 (hypothetical protein FisN_9Hh178 [Fistulifera solaris])

HSP 1 Score: 133.7 bits (335), Expect = 1.400e-27
Identity = 90/313 (28.75%), Postives = 150/313 (47.92%), Query Frame = 0
Query:   79 GLLRKVEAFVATGTGPLSQWARRVMVIPENAKRLAELRRRVEVCRQAARDMRSD-DWHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFVRDAVLHLYGCD-ASEENLIILSGASM---------PESEITDE------MDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRSDP-FYANYLVPYCLHLAHTKGWAVPDVPAFEVDRD 374
            GLL+K  A +      L Q A+   ++ E    L +L     +   A +++ +D DW  A    GI T+ R++E D +L+ +  GE+   P+  Q+AVLR  D +++W+P    S ++ +LGK++ + WF +        RD      GCD  SE+  II++G  +         PE            +++ P   K  + R+ I+ F   + I SPT  K  ++ NL+  +  + Q II++  K   G V+  L    +++  +PV N  AQ MR +P FY  +L+         KGW +P V AF V+ +
Sbjct:   77 GLLKKENAALTKEQEEL-QLAKN--ILKEKESELHKLENVSRIFYGALKNLNTDEDWTFASLHFGITTYYRREE-DGSLSVKLEGELTGVPLFEQIAVLRAGDLHYKWVPFCSSSMIIAQLGKLDIINWFMIGIPQFGLARDGCYRAIGCDNMSEDGSIIIAGQGINDIMPGDHPPEDPFLSNDPAVFALNIPPAPTKRGNGRMTIRKFETVVNITSPTSAKTRIVANLNPNIAFLSQGIIDFALKHLAGVVLAKLQSAAKKVVKNPVTNHHAQQMREEPDFYQTWLMAKFKAFCDEKGWEMPRVSAFTVNEE 385          
BLAST of NO09G03550 vs. NCBI_GenBank
Match: OQR94905.1 (transmembrane protein, partial [Thraustotheca clavata])

HSP 1 Score: 132.1 bits (331), Expect = 4.000e-27
Identity = 94/318 (29.56%), Postives = 162/318 (50.94%), Query Frame = 0
Query:   42 DVTASAVEE-------MQVGEENVQWAYRLIQLLDADTRLFLADGLLRKVEAFVATGTGPLSQWARRVMVIPENAKRLAELRRRVEVCRQAARDMRSD---DWHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFV-RDAVLHLYGCDAS-EENLIILSGASMPESEITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDP-VHNPT---AQLMRSDPFY 344
            D+ A A++E       + VG ENVQW +  IQ L  + RLF A  L+ K+E F++   G   Q A    ++      L++++ R  +  QA  +   D    W  A T  G+ T  +  + D T+  +  G  E   + + LAV+RE D +H W P  ++S+++  LG++E + +  +A   IP + RDA++H +G +A+ E   I+L G S+ E +        PP K WN  R+D++ F   ++       +  ++ N+  K   VP  ++N+  K   G +++ L +E  +I+     H+PT   A+ +R+DPFY
Sbjct:  415 DIEALALQETLVDYSHVVVGLENVQWVWTHIQYLINEERLFSAAPLIEKLEQFLSPRLGN-RQCADINQLVQGKLSELSQVKERSAMGHQALHEFNLDADAGWRFAQTYFGVSTHWKPGD-DGTIWLKLDGICEGVDIFNALAVIRETDLFHLWAPFCNRSELLANLGRVELIAYMSLA---IPLMQRDAIVHAFGINATYEHRCIVLLGKSITEDQCPVNNLEFPPIKGWNADRMDLRAFRALIEPYGRNRARTCIVVNVHPKCP-VPMTLLNFTIKKMAGILLYLLMREAGKIEKHKNEHDPTNEHAKRIRNDPFY 726          
BLAST of NO09G03550 vs. NCBI_GenBank
Match: EJK43974.1 (hypothetical protein THAOC_37531, partial [Thalassiosira oceanica])

HSP 1 Score: 128.3 bits (321), Expect = 5.700e-26
Identity = 91/330 (27.58%), Postives = 140/330 (42.42%), Query Frame = 0
Query:  104 VIPENAKRLAELRRRVEVCRQAARDMRSDD------------WHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFVRDAVLHLYGCDASEEN---LIILSG-----------------------------------------------ASMPESEITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRSD-PFYANYLVPYCLHLAHTKGWAVPDVPAFEV 371
            ++ E +   A LRRR  +   A   +   D            W  A T  G+ T  R+ E D +L+ R  G++   P+  QLA+LRE D YH W P    S+ + +LG+++   W+ V        RDA     GCD   E+   +I+  G                                               +S+   EI   +++ P        R+ I+ FS ++ +L PT  +  ++ N+D  L L+PQA+I++  K  CG ++  L    RR+  DPV N  A+ MR D  FY ++L+P        KGW +P V AFEV
Sbjct:   75 LLDEKSDEFALLRRRASLFLAAKETLSQHDKNDGEESDENTGWVHAQTLFGVSTHYRR-ESDGSLSIRIAGDLVGVPLFEQLAILREVDLYHAWAPFCVSSRKLAQLGRLDVAAWYDVGVPIFGLSRDACYRAVGCDGMAEDGSVMIVAVGLNDTDEHGVVSSASLGKQTRKRGPSXXXXXXXXXXAEGLEATEGSLLSSLARDEILSTLEMPPVPSGAGRGRMTIRNFSAKVDVLGPTSARTIMVVNVDPNLQLIPQALIDFSMKKMCGILLSRLQASARRVLKDPVGNAHARRMREDVTFYRDWLLPKFRAYCEAKGWNMPPVGAFEV 403          
BLAST of NO09G03550 vs. NCBI_GenBank
Match: XP_002180706.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC48114.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 126.3 bits (316), Expect = 2.200e-25
Identity = 78/287 (27.18%), Postives = 137/287 (47.74%), Query Frame = 0
Query:   80 LLRKVEAFVATGTGPLSQWARRVMVIPENAKRLAELRRRVEVCRQAARDMRSDD-WHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFVRDAVLHLYGCD-ASEENLIILSGAS---------------MPESEITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRS-DPFYANYLV 349
            ++RK  A + T             ++  N   + +L  RV + R+A  ++  DD W  A T  GI+TF R++E D +L+ +  GEIE  P+  Q+ VL+E D +++W P    S  V  L K++ + WF +        RD      GCD   E+  I+L G                 + E  I +++ + P  K+    R+ I+ F   + +LSPT  K  ++ N+D  +  +PQ+++ +  K   G ++  L    +++  +PV N  A+ MR  + FY ++L+
Sbjct:   83 IIRKESAKLETEXXXXXXXXXAKEILNSNKAAIDKLENRVRIFRKALHNLNEDDEWTYASTHFGIKTFYRREE-DQSLSVKLEGEIEGVPLFEQICVLKEVDLHYKWAPFCSSSMTVADLDKLDTVGWFMIGLPHFGVARDGCFRAIGCDNIIEDGSILLVGQGVHDRPPDAPPPEDPFLSEDPILNDLGIPPVPKRRGSGRMTIRKFESVIHVLSPTSAKTRIVANIDPNMAFLPQSLLEFLMKHLAGVMLAKLQAATKKVLKNPVSNEHARKMREHEDFYKHWLM 368          
BLAST of NO09G03550 vs. NCBI_GenBank
Match: EWM26881.1 (transmembrane protein [Nannochloropsis gaditana])

HSP 1 Score: 124.8 bits (312), Expect = 6.300e-25
Identity = 91/307 (29.64%), Postives = 142/307 (46.25%), Query Frame = 0
Query:   35 NYRGYTMDVTASA-VEEMQVGEENVQWAYRLIQLLDADTRLFLADGLLRKVEAFV--------ATGTG-------------------PLSQWARRVMVIPENAKRLAELRRRVEVCRQAARDMRSD-DWHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFV--RDAVLHLYGCDASEENLIILSGASMPESE-------------------------ITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKID 286
            NY  ++ ++ A A V+ + + E NVQ A+R +Q L  D RL LA  L  K+ +F+        A  TG                   P +   R+ M  P+   RL  L RRV  C +A     S+  W  A    G+ T  R  E D TL  R   ++E+C V  +LAVLRE D Y  W P +  S +V+ +GK E ++WF+     +P++  RDA +H++ CDA+E  +++L G S+ E E                             +++ P    WN AR++++    Q+++L P  C +D
Sbjct:   40 NYTFFSRNLDAVADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFLGVTEAGVAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLDRRVNACVEALDLFASETGWVFAQKYFGVSTHYRM-EDDGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFL---VPWLASRDACVHIFACDATERGVLLLCGQSIREGEGKGXXXXXXXXXXXAGGMEKVPLFDAIPGLNIPPLASGWNSARMEVRKCWCQIELLGPRACCVD 342          
BLAST of NO09G03550 vs. NCBI_GenBank
Match: OEU22457.1 (hypothetical protein FRACYDRAFT_179309, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 124.8 bits (312), Expect = 6.300e-25
Identity = 80/273 (29.30%), Postives = 133/273 (48.72%), Query Frame = 0
Query:  104 VIPENAKRLAELRRRVEVCRQAARDMR-SDDWHLAHTEDGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGKIEQMVWFRVAGTGIPFVRDAVLHLYGCDASEEN---LIILSG-ASMPE---------------------SEITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMR-SDPFYANYLVP 350
            ++ EN   L ++  R  +  +A +++  +DDW  A T  G+ T+ RK E D +L+ +  G +ED  + +Q+AVLRE D  + W P +  S  V  L K++ + WF V       +RDA     GCD+  E+   L++  G A  PE                       I D +D+ PP  +  + R+ I+  S Q+ I S T     ++ N+D+ L  +P  ++++  K  CG +++ +    R+I  DP+ N  A  MR  D FY  +L+P
Sbjct:  128 LLDENEDILNKMEDRCRLFEKAKKNLDVNDDWTHAQTMFGVTTYYRK-ESDGSLSIKLEGTVEDASLFNQIAVLREIDLTYLWAPFVTSSMTVAHLDKLDTVGWFVVGLPHFGIMRDACFRAIGCDSMYEDGSVLLVAEGIADRPEDLDGDDKRDLNRTRIEDSLRTDPILDTLDLPPPPTRTGNGRMTIRSISAQIHIESATSSTTKIVANIDLNLPFIPPKLLDFIMKRMCGLILYKMQGAARKISRDPITNLHAIKMREDDDFYRRFLLP 399          
The following BLAST results are available for this feature:
BLAST of NO09G03550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27447.11.900e-17578.17transmembrane protein [Nannochloropsis gaditana][more]
CBJ32035.11.600e-3932.10conserved unknown protein [Ectocarpus siliculosus][more]
EWM27457.13.500e-3978.49hypothetical protein Naga_100107g9 [Nannochloropsi... [more]
EWM25463.11.400e-2730.18START-like domain protein [Nannochloropsis gaditan... [more]
GAX11088.11.400e-2728.75hypothetical protein FisN_9Hh178 [Fistulifera sola... [more]
OQR94905.14.000e-2729.56transmembrane protein, partial [Thraustotheca clav... [more]
EJK43974.15.700e-2627.58hypothetical protein THAOC_37531, partial [Thalass... [more]
XP_002180706.12.200e-2527.18predicted protein, partial [Phaeodactylum tricornu... [more]
EWM26881.16.300e-2529.64transmembrane protein [Nannochloropsis gaditana][more]
OEU22457.16.300e-2529.30hypothetical protein FRACYDRAFT_179309, partial [F... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR076ncniR076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010901NSK010901Nannochloropsis salina (N. salina CCMP1776)gene


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100107g9gene3108Nannochloropsis gaditana (N. gaditana B-31)gene
jgi.p|Nanoce1779_2|634061gene_10342Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03550.5NO09G03550.5Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO09G03550.4NO09G03550.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO09G03550.3NO09G03550.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO09G03550.2NO09G03550.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO09G03550.1NO09G03550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03550.5NO09G03550.5-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO09G03550.4NO09G03550.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO09G03550.3NO09G03550.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO09G03550.2NO09G03550.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO09G03550.1NO09G03550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03550 ID=NO09G03550|Name=NO09G03550|organism=Nannochloropsis oceanica|type=gene|length=3439bp
ACAGGTAACATACGGTCGTGATTATTTTTCCTCCATAGCGCCCATTGATG
TGCTCTTTCCGGCGGAAATAGCCGCAACACCAACACATCAAGCGGCATCG
CCTGCTACTGCGACTACCTGCATGCTGAAGGCACAATCTGCGTTTAGCCC
AGCATAACTACCTTGGAAAAGGAGAAAGCCTTCCTACACTATCTTATCCA
GGGCCTTCGGAGCCCGCATGGCCCCACGCGCACTCGGTACGTTATGTATG
TGGTTATGATGCTCAGTCTGCTCTGCCCTGTCTCTCCATCCTTCTCTCGT
TCGGCAAGGCAAGTCGAGACCCGCCCATTATGGCCCCCCTAGAGGCAAGC
AGCAGTCCATCCCAAGAGCATCAGCCAGCGTTGGACAAGgtgcgaatgtg
tatctctctcttattcttgttatgcggctctaaattttttctgtgtggct
gagcaatacgcttatttctcgcttcctctccccttccccaatcccaccgt
acgcaccctagCACGAAGCATGGCCCGACCCAGAAGAGGAAGGCAAGGAT
GGCAACTATCGCGGATACACCATGGATGTGACCGCAAGCGCAGTGGAGGA
AATGCAAGTGGGGGAGGAGAATGTGCAATGGGCCTATCGATTGATCCAGC
TCTTGGATGCCGACACTCGTCTGTTTTTGGCGGATGGGCTGCTTCGCAAG
GTGGAGGCATTCGTAGCTACCGgtgagtacattagaaagcagacactttt
tttatggatggagataaaggcatggcatacgaacgaaagctccgacatag
gttgctccatactgaataaataggaagcaaaagggagttgactcttgatg
atttcattccccttatgtcccagGTACCGGCCCCCTCTCGCAGTGGGCGC
GACGAGTGATGGTGATACCGGAGAATGCAAAGCGCTTGGCTGAACTCCGG
CGACGGGTGGAAGTGTGTCGACAGGCAGCGAGgttagaaagaagggcgtg
aaagagggcgcttcgacaagcattcactcacctctctagcctcctccgtc
tgcatcctcacacagGGACATGCGCTCCGATGATTGGCATCTCGCTCACA
CGGAAGACGGGATTGAGACGTTTTCTCGAAAGGATGAAGGGGACAATACA
TTGGCGTGGCGGACTCATGGAGAGATTGAGGATTGCCCGGTGGTGTCCCA
Ggtagaggaaggagggagcgagggacggacggagggaggggaggaagaga
ggaggcacgtcgtgtacgtcggcagatatacaatttcgacattcatttgg
tatctagcagtactccaatttatgtgtcatagccataagcgtgaaaaccc
tccctctctccctccctccccctcaccacagCTGGCCGTTCTGCGAGAGC
CGGATCACTACCACCGATGGATTCCTCTTATGGACAAAAGCAAAGTCGTC
AAGCGCCTCGGCAAGATCGAGCAGATGGTCTGGTTCCGGGTAGCAGGCAC
CGGgtatgccctctctcccttcctttgtccctcccttcctcctgcccttt
cgaccgtttttcccccttccgtcattcccttttcatttcctcctttcctc
tctccttccctcttggctagacattcaactgacataccctctctctgtct
ccctcctcccctccctccctccctccctccccccctcagCATCCCCTTTG
TGCGTGACGCCGTCCTCCACCTGTACGGGTGCGACGCCTCGGAGGAAAAC
CTCATCATCCTGTCCGGTGCCTCCATGCCAGAGAGCGAGATAACGGACGA
GATGGACGTGAGGCCGCCCAAGAAAAAGTGGAACCATGCGCGGGTCGATA
TCAAGTACTTCAGCATCCAGGTATCTTTCCTTCCTTCCTCCTCACTTCTC
TTCCTCCCTCCTCGCTTTCCTTTCTTCCTCCTTGCTTTTTTCCTGTTCTT
TTCGATTTCCTTCCTCCCTCGTCACTTCCCTTCCCTCCTCCTCACTTCCT
CGCTACCCTTCCTTCATCCTCACTTTCCGGTCTTCCTCCTCACCCCCTGC
CTTTCCTCCTCTTTTTCTTTTTTCCCTCCTCGCTCTCCCTCTTTCCTCCT
CACTACCCTTCCTCGTTTTTCGCTTCCCTTCCCCCTCGCCCCGTGTTCAC
TTTTCTCCCCTTCCAGAACTTTGAACGCCTCGAAGCTCATCCCCCTCCCT
CCCTCCCTCCCTCCCTCCCTTCGTGCCTGCCTGTACAGCTCAAGATCCTG
TCCCCCACGCACTGTAAGATCGACCTCATCTACAACCTGGACGTGAAGCT
AACACTTGTCCCGCAGGCCATCATCAACTACTTCTCCAAATTCACCTGCG
GATGGGTGATATGGTTCCTTTTCCAGGAGgtgcgtcaaaggcgttataac
acatcccgtctcaggggggagggagggaggaagggaggaaaggaggtttc
tcctgcattctcgaatctgcacgccttccctctgagctgctctccctccc
tgcctccctccctccctccccccccctcatctgcccatagATGCGACGCA
TTCAGACAGATCCTGTACATAACCCCACGGCGCAGCTCATGCGCTCGGAT
CCTTTCTATGCCAACTACCTCGTGCCTTACTGTCTTCACCTCGCCCACAC
CAAGgtaggcagcgtcatctcgctccttctccttcctccctccattcttg
gaccgttacattctgtacacacatctgatatttcttttcatcccttttct
tcaccctcccttcctccctccctccctccctccctccctcgcttctgatc
tcttctcgccaattttgcgggtttgagctagaggctggatttctccgctt
gacccactccctccttctctctctctttcctaccttctcccctccctcct
tctctccctccctccttccttccttccctccctagGGGTGGGCGGTACCG
GACGTACCCGCGTTTGAAGTAGACCGTGATTGCACGACTGCCAAGGCCTG
GAGGCAAGAGCACCACGAGCTGCTCGCCAAAAATAGATTGCTTTCAGGAG
GAGGAGGGGAGGGGGGGAGTGGGGGAGAGGAGAGAGGAGGTGGGGGACAG
GAAGGAAAGTAGGGCGCGGTAGTGGCGGAAGGGTAGCTGTGATGGGAGTA
GAAAGGAGGGGGAAAGGGAGGGAGGGGGGGGGAGATAGAAGTGTACAGCC
TGGATAAATGAAGATGGTCAGCGACGGCGAAGATATATGGAGGTTGAAGA
AGGAGGGGAAGTGGGAGGGAGACCAAAAAGAGGCAAGAGTAGAGTAGAGT
TGCGTAGATTTTGATTGGATTGGAGTGCCTGGACGTGTAAGGGGAGTTCG
AGAGGTAGGAAGGAGGAGAAAAGAAAACGAGGCCGCCATGAGATGTTGGG
CTGACAGATCCGAGATAGATCCTCTATATCTCATACGCT
back to top

protein sequence of NO09G03550.5

>NO09G03550.5-protein ID=NO09G03550.5-protein|Name=NO09G03550.5|organism=Nannochloropsis oceanica|type=polypeptide|length=415bp
MAPLEASSSPSQEHQPALDKHEAWPDPEEEGKDGNYRGYTMDVTASAVEE
MQVGEENVQWAYRLIQLLDADTRLFLADGLLRKVEAFVATGTGPLSQWAR
RVMVIPENAKRLAELRRRVEVCRQAARDMRSDDWHLAHTEDGIETFSRKD
EGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGK
IEQMVWFRVAGTGIPFVRDAVLHLYGCDASEENLIILSGASMPESEITDE
MDVRPPKKKWNHARVDIKYFSIQVSFLPSSSLLFLPPRFPFFLLAFFLFF
SISFLPRHFPSLLLTSSLPFLHPHFPVFLLTPCLSSSFSFFPPRSPSFLL
TTLPRFSLPFPLAPCSLFSPSRTLNASKLIPLPPSLPPSLRACLYSSRSC
PPRTVRSTSSTTWT*
back to top

protein sequence of NO09G03550.4

>NO09G03550.4-protein ID=NO09G03550.4-protein|Name=NO09G03550.4|organism=Nannochloropsis oceanica|type=polypeptide|length=377bp
MDVTASAVEEMQVGEENVQWAYRLIQLLDADTRLFLADGLLRKVEAFVAT
GTGPLSQWARRVMVIPENAKRLAELRRRVEVCRQAARDMRSDDWHLAHTE
DGIETFSRKDEGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMD
KSKVVKRLGKIEQMVWFRVAGTGIPFVRDAVLHLYGCDASEENLIILSGA
SMPESEITDEMDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNL
DVKLTLVPQAIINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRSD
PFYANYLVPYCLHLAHTKGWAVPDVPAFEVDRDCTTAKAWRQEHHELLAK
NRLLSGGGGEGGSGGEERGGGGQEGK*
back to top

protein sequence of NO09G03550.3

>NO09G03550.3-protein ID=NO09G03550.3-protein|Name=NO09G03550.3|organism=Nannochloropsis oceanica|type=polypeptide|length=406bp
MAPLEASSSPSQEHQPALDKHEAWPDPEEEGKDGNYRGYTMDVTASAVEE
MQVGEENVQWAYRLIQLLDADTRLFLADGLLRKVEAFVATGTGPLSQWAR
RVMVIPENAKRLAELRRRVEVCRQAARDMRSDDWHLAHTEDGIETFSRKD
EGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGK
IEQMVWFRVAGTGIPFVRDAVLHLYGCDASEENLIILSGASMPESEITDE
MDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQA
IINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRSDPFYANYLVPY
CLHLAHTKVGSVISLLLLPPSILGPLHSVHTSDISFHPFSSPSLPPSLPP
SLPRF*
back to top

protein sequence of NO09G03550.2

>NO09G03550.2-protein ID=NO09G03550.2-protein|Name=NO09G03550.2|organism=Nannochloropsis oceanica|type=polypeptide|length=417bp
MAPLEASSSPSQEHQPALDKHEAWPDPEEEGKDGNYRGYTMDVTASAVEE
MQVGEENVQWAYRLIQLLDADTRLFLADGLLRKVEAFVATGTGPLSQWAR
RVMVIPENAKRLAELRRRVEVCRQAARDMRSDDWHLAHTEDGIETFSRKD
EGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGK
IEQMVWFRVAGTGIPFVRDAVLHLYGCDASEENLIILSGASMPESEITDE
MDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQA
IINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRSDPFYANYLVPY
CLHLAHTKGWAVPDVPAFEVDRDCTTAKAWRQEHHELLAKNRLLSGGGGE
GGSGGEERGGGGQEGK*
back to top

protein sequence of NO09G03550.1

>NO09G03550.1-protein ID=NO09G03550.1-protein|Name=NO09G03550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=365bp
MAPLEASSSPSQEHQPALDKHEAWPDPEEEGKDGNYRGYTMDVTASAVEE
MQVGEENVQWAYRLIQLLDADTRLFLADGLLRKVEAFVATGTGPLSQWAR
RVMVIPENAKRLAELRRRVEVCRQAARDMRSDDWHLAHTEDGIETFSRKD
EGDNTLAWRTHGEIEDCPVVSQLAVLREPDHYHRWIPLMDKSKVVKRLGK
IEQMVWFRVAGTGIPFVRDAVLHLYGCDASEENLIILSGASMPESEITDE
MDVRPPKKKWNHARVDIKYFSIQLKILSPTHCKIDLIYNLDVKLTLVPQA
IINYFSKFTCGWVIWFLFQEMRRIQTDPVHNPTAQLMRSDPFYANYLVPY
CLHLAHTKRLDFSA*
back to top
Synonyms
Publications