More shared resources, please refer to public ftp server: ftp://nandesyn.single-cell.cn/pub/.
Nannochloropsis oceanica IMET1 version 2: |
|
| Genome assembly FASTA: | IMET1v2.fasta |
| Gene structure annotation GFF3: | IMET1v2.gene.gff3 |
| Gene synonyms: | IMET1v2all.synonym.txt |
| Repeat annotations: | IMET1v2.fasta.RM.tar.gz |
| Protein sequences: | IMET1v2.protein.fa |
| 6mA methylation: | IMET1v2_m6A.gff |
| Conversion with IMET1v1: | IMET1v2.synonym.txt |
| tRNA annotation: | IMET1v2_tRNA.zip |
Nannochloropsis salina CCMP1776: |
|
| Genome assembly FASTA: | N_salina.genome.fasta |
| Gene structure annotation GTF: | N_salina.gtf |
| mRNA sequences: | N_salina.mRNA.fasta |
| MiRNA: | N_salina.miRNAs.gff3 |
| CircRNA: | N_salina.circRNAs.bed |
N. salina CCMP537 contigs: |
GCA_004335465.1_ASM433546v1_genomic.fna |
Collection of genome assemblies from QIBEBT: |
database.tar.bz2 |
Collection of PGDBs: |
pgdbs.tar.gz |
Sister groups of algae deployed in NanDeSyn:
Monodopsis sp. C141 FASTA GFF Contact: Fay-Wei Li (fl329@cornell.edu)
Monodopsis sp. C73 FASTA GFF Contact: Fay-Wei Li (fl329@cornell.edu)
Vischeria sp. C74 FASTA GFF Contact: Fay-Wei Li (fl329@cornell.edu)