NO13G01760, NO13G01760 (gene) Nannochloropsis oceanica

Overview
NameNO13G01760
Unique NameNO13G01760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2743
Alignment locationchr13:515982..518724 +

Link to JBrowse

Properties
Property NameValue
DescriptionThioredoxin domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:515982..518724 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO:0019725cellular homeostasis
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR013766Thioredoxin_domain
IPR012936Erv_C
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005623cell
Homology
BLAST of NO13G01760 vs. NCBI_GenBank
Match: EWM21843.1 (Thioredoxin domain protein [Nannochloropsis gaditana])

HSP 1 Score: 686.0 bits (1769), Expect = 6.500e-194
Identity = 317/381 (83.20%), Postives = 353/381 (92.65%), Query Frame = 0
Query:    1 MLDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREILHDDHHAELEVLLQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNWPERDREYVEHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFGPLYQDEVLTRLEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKEDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRLLRPSTKLRS 382
            MLDLPCR+AVVDVLDVLGTNRMN++KNIEKWNLDE GRRR+FQGRNREER ILHD+HH  LEVLLQNGEHA+PL ADSFDEY+++NEFTFVSFYAPWC+WCQRLAPTWEAFAEHVE   IP+KVAK+DCVTH QLC+DQKVHAFPTLR+FNRA PLPPDYNTDRT+ AL S+VTR+L VEEK+K+WPERD+EYVEHPGCMLSGHLLVNRVPGNFHIEARS  HNLNA  TNLSHVVNHLSFGPLY  +VL+RLE+FSSEFYVSN+LDGR FVL+E HKAHHHY+KVVGTLYEVP RWG+ DM TYQMLPETS+M+Y +D+VPEAKFSYE+SPMAVIVK+TGRRWYEF TSL GILGGTFTVVGLLDSTLHRLL+PS+ L+S
Sbjct:   77 MLDLPCRYAVVDVLDVLGTNRMNVSKNIEKWNLDEAGRRRYFQGRNREERSILHDEHHGALEVLLQNGEHAVPLAADSFDEYLESNEFTFVSFYAPWCIWCQRLAPTWEAFAEHVEEAQIPVKVAKIDCVTHAQLCRDQKVHAFPTLRMFNRARPLPPDYNTDRTLVALTSFVTRKLAVEEKKKSWPERDQEYVEHPGCMLSGHLLVNRVPGNFHIEARSAVHNLNAAMTNLSHVVNHLSFGPLYDSQVLSRLERFSSEFYVSNALDGRDFVLEEPHKAHHHYLKVVGTLYEVPMRWGRADMLTYQMLPETSLMTYGLDEVPEAKFSYEVSPMAVIVKKTGRRWYEFVTSLCGILGGTFTVVGLLDSTLHRLLKPSSNLQS 457          
BLAST of NO13G01760 vs. NCBI_GenBank
Match: GAX20665.1 (hypothetical protein FisN_32Hh054 [Fistulifera solaris])

HSP 1 Score: 406.4 bits (1043), Expect = 1.000e-109
Identity = 197/395 (49.87%), Postives = 266/395 (67.34%), Query Frame = 0
Query:    1 MLDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREILHDDHHAELEVL-LQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNWPERDREYVE----------------HPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFG-PLYQDEVLTR--LEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKEDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRLLRP 376
            MLDL C F  VDV D LGTNR N+TKN++KW LDEEG+RR F GRNRE RE+ HD+H   LE +  + G HAI LT ++F  +++ N   F+  YAPWCVWCQRLAPTWE  A+ V+   +P+ VAKVDC+    LC++QK+ AFPTLR ++   P+ PDY  DRTV AL  Y  R+L+++EK K W +++ +  E                HPGC +SGHL+VNRVPGNFHIEA+SK  NLNA  TN+SH+VNHLSFG P+ Q    T+  L++   +    + +D  ++V +  H AHHHY+KVV T  E+ Q      + TYQ L ++ V+ Y   DVPEA+FSY+ISPM+V+V + GR+WY++ TSL  I+GGTFT +GL+D+ L+ +L+P
Sbjct:   83 MLDLHCDFVSVDVWDALGTNRQNVTKNVDKWQLDEEGKRRIFSGRNREARELKHDEHDKTLEEMHAEEGVHAIALTKENFKPFLEENPMAFIDLYAPWCVWCQRLAPTWETLAQEVKKLEMPVGVAKVDCMAEADLCREQKIMAFPTLRWYHDGEPVSPDYKMDRTVTALIGYAKRKLDMDEKFKEWDKKNEQADEEERARKRSLYQQNRPDHPGCQVSGHLMVNRVPGNFHIEAKSKNFNLNAALTNVSHIVNHLSFGDPVDQTSRKTKRILKQVDEKHKQFSPMDNSVYVTEMSHAAHHHYIKVVSTHLEMGQS-SNNRLTTYQFLEQSQVVHYFDTDVPEARFSYDISPMSVVVSKEGRKWYDYLTSLCAIIGGTFTTLGLIDAILYSVLKP 476          
BLAST of NO13G01760 vs. NCBI_GenBank
Match: GAX12875.1 (hypothetical protein FisN_32Lh054 [Fistulifera solaris])

HSP 1 Score: 405.6 bits (1041), Expect = 1.700e-109
Identity = 196/395 (49.62%), Postives = 266/395 (67.34%), Query Frame = 0
Query:    1 MLDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREILHDDHHAELEVL-LQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNWPERDRE----------------YVEHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFG-PLYQDEVLTR--LEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKEDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRLLRP 376
            MLDL C +  VDV D LGTNR N+TKN++KW LDEEG+RR F GRNRE RE+ HD+H   LE +  + G HAI LT ++F  +++ N   F+  YAPWCVWCQRLAPTWE  A+ V+   +P+ VAKVDC+    LC++QK+ AFPTLR ++   P+ PDY  DRTV AL  Y  R+L+++EK K W +++++                  EHPGC +SGHL+VNRVPGNFHIEA+SK  NLNA  TN+SH+VNHLSFG P+ Q    T+  L++   +      +D  ++V +  H AHHHY+KVV T  E+ Q      + TYQ L ++ V+ Y   DVPEA+FSY+ISPM+V+V + GR+WY++ TSL  I+GGTFT +GL+D+ L+ +L+P
Sbjct:   83 MLDLHCDYVSVDVWDALGTNRQNVTKNVDKWQLDEEGKRRIFSGRNREARELKHDEHDKTLEEMHAEEGVHAIALTKENFKPFLEENPMAFIDLYAPWCVWCQRLAPTWETLAQEVKKLEMPVGVAKVDCMAEADLCREQKIMAFPTLRWYHDGEPVSPDYKMDRTVTALIGYAKRKLDMDEKFKEWDKKNQQADEEERARKRSLYQQNRPEHPGCQVSGHLMVNRVPGNFHIEAKSKNFNLNAALTNVSHIVNHLSFGEPVDQTSRKTKRILKQVDEKHKQFAPMDNTVYVTEMSHAAHHHYIKVVSTHLEMGQS-SNNRLTTYQFLEQSQVVHYFDTDVPEARFSYDISPMSVVVSKEGRKWYDYLTSLCAIIGGTFTTLGLIDAVLYSILKP 476          
BLAST of NO13G01760 vs. NCBI_GenBank
Match: XP_002182871.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45607.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 401.7 bits (1031), Expect = 2.500e-108
Identity = 192/396 (48.48%), Postives = 272/396 (68.69%), Query Frame = 0
Query:    1 MLDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREILHDDHHAEL-EVLLQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNW------------PERDREYV-----EHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFG-PLYQDEVLTR--LEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKEDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRLLRP 376
            + DL C +  +DV D LGTN+ N+TKNI+KW LD +G RR F GRNRE RE++HD H   L E+  ++G+  + LTAD+FD++M+ +E  FV  YAPWCVWCQRLAPTWE FA+ V+ E +PI VAK+DC+    LC+ Q+V AFPTLR ++    + PDY  DRT+ AL S+  R+L+++EK K W             E+ R+       +HPGC +SGHL+VNRVPGNFH+EA+SK+HNLNA  TNLSHVVNHLSFG P+ ++   ++  L++   E      +DG+ F+   +H+A HHY+KVV T   +        M TYQ L ++ ++ Y   +VPEA+FSY++SPM+V+V++ GR+WY++ TSL  I+GGTFT +GL+D+TL+++L+P
Sbjct:   70 LTDLQCDYVSIDVWDALGTNKQNVTKNIDKWQLDAQGIRRIFSGRNREGREVVHDSHDRSLDEIHSEDGKAVVDLTADTFDDFMEEHEMAFVDLYAPWCVWCQRLAPTWELFAQEVKKEGMPIGVAKIDCMAEADLCRAQRVMAFPTLRWYHEGKAVAPDYKMDRTIPALTSFAKRKLDMDEKFKEWHSKASDSADPAEVEKKRQLYQQNRPDHPGCQVSGHLMVNRVPGNFHLEAKSKSHNLNAAMTNLSHVVNHLSFGEPIDENNRKSKRILKQVPEEHRQFAPMDGQAFLTKAFHQAFHHYIKVVSTHLNMGSS-DANSMLTYQFLEQSQIVFYDDVNVPEARFSYDLSPMSVVVEKEGRKWYDYLTSLCAIIGGTFTTLGLIDATLYKVLKP 464          
BLAST of NO13G01760 vs. NCBI_GenBank
Match: EJK74922.1 (hypothetical protein THAOC_03372 [Thalassiosira oceanica])

HSP 1 Score: 401.0 bits (1029), Expect = 4.200e-108
Identity = 191/404 (47.28%), Postives = 269/404 (66.58%), Query Frame = 0
Query:    1 MLDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREILHDDHHAELEVLLQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNW--------------PERDREYVEHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFG-PL-----------YQDEVLTRLEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKED---MFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRLLRP 376
            ++DL C +  VDV D LGTNR N+TKNIEKW LDE G+RR F GRNR++RE++H++H   LE L ++G  A+ LT DSF  ++ ++E  F+  YAPWC+WCQRL PTWE FAE V ++ +P+ V KV+CV + QLCKD+KV AFPTLR +     + PDY  DRTVAAL+ Y  R+L +E+K K+W              P   +   EHPGC +SGHL+VNRVPGNFHIEA+S  HNLNA  TNL+H VNH+SFG P+           +  +V   L++   E    N +D + ++  ++H+A HHY+KVV T   +       D   +  YQML ++ ++ Y   +VPEA+FSY++SPM+V+V++ GR+WY++ TSL  I+GGTFT +GL+D+TL+++ +P
Sbjct:  177 LMDLHCDYVSVDVWDTLGTNRQNVTKNIEKWQLDESGQRRIFSGRNRDQREVVHEEHEETLEELHEDGAQAVELTPDSFKPFLMSHEMAFIDMYAPWCIWCQRLHPTWEKFAEEVYSQGMPVGVGKVNCVVYGQLCKDEKVMAFPTLRWYKGGEAILPDYKMDRTVAALSGYAKRKLEMEQKYKDWEQKNANDPSNKRGRPNAGKSRPEHPGCQVSGHLMVNRVPGNFHIEAKSVNHNLNAAMTNLTHRVNHISFGEPITKLPYHMENTPFMRKVKRVLKQVPEEHKQFNPMDDQEYITTQFHQAFHHYIKVVSTHLNMGSSSTVNDVNSITVYQMLEQSQIVFYDEVNVPEARFSYDMSPMSVVVQKEGRKWYDYLTSLCAIIGGTFTTLGLIDATLYKVFKP 580          
BLAST of NO13G01760 vs. NCBI_GenBank
Match: EWM21113.1 (Thioredoxin domain protein [Nannochloropsis gaditana])

HSP 1 Score: 398.3 bits (1022), Expect = 2.700e-107
Identity = 199/386 (51.55%), Postives = 251/386 (65.03%), Query Frame = 0
Query:    1 MLDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREILHDDHHAELEVLLQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNWPERDREYV--------EHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFGPLYQDEVLTRLEKFSSEFYVSNS-LDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWG--KEDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRLLRP 376
            MLD+PC FA VDVLDVLGTN+ N+TKNIEKWNLD+  +RR FQGRNRE+R+++HDD                      F  ++   E+ F +FYAPWCVWCQRLAPTWEAFAE +E +   IKV K+DCV H  LC +  + AFPTLRL+     + PDY  DRTV AL SY+ R L++  K  +     RE +        EHPGC+LSG LLVNRVPGNFHIEARSK HNLN   TN+SHVV+ L+FGP    E   +L      F  + S L  +++V+ + H A HHY+KVV T YEV + +G  K  +  YQM+  + VM Y  D+VPEAKFSY+ISP+A ++    R WYEF TSL  I+GGTFTV+GLLD  L ++L+P
Sbjct:   78 MLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDXXXXXXXXXXXXXXXXXXXXXXFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKVASSAPEHREKIERTLFAEAEHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVTREYREKLALLPKGFQQTRSPLADQVYVVSKVHHAFHHYLKVVSTHYEVSRTFGGQKSTVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFTVLGLLDHMLGKVLKP 463          
BLAST of NO13G01760 vs. NCBI_GenBank
Match: OEU22912.1 (DUF1692-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 387.1 bits (993), Expect = 6.300e-104
Identity = 186/397 (46.85%), Postives = 261/397 (65.74%), Query Frame = 0
Query:    1 MLDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREILHDDHHAELEVL-LQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNWP-------------ERDREY-----VEHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFG-PLYQDEVLTR--LEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKEDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRLLRP 376
            MLD+ C +  VDV D LGTNR N+TKN+EKW L E+G  R F GRNRE+RE+ H++H   LE +  ++G  A  L  D+F  +++ +E  FV  YAPWCVWCQRL PTWE FA+ V+   +P+ V K+DC+    LC+D+KV AFPTLR ++    + P+Y  DRTV AL  +  R+L + +K K+W              E+ R+       EHP C +SGHL+VNRVPGNFHIEA+SK HNLN+  TNL+HVVNH+SFG PL Q     +  L++   E    N +D  M++  E+H+A+HHY+KVV T   V      + M TYQ L ++ V+ Y   +VPEA+FSY++SPM+V+V++ GR+WY++ TSL  I+GGTFT +GL+D+ L+++ +P
Sbjct:   70 MLDIHCDYVSVDVWDALGTNRQNVTKNVEKWQLSEDGNTRLFSGRNREQREVRHEEHDRTLEEMHEEDGVQAFELKKDNFKGWLEEHEMAFVDMYAPWCVWCQRLGPTWEKFAQEVKTLKMPVGVGKLDCMQEADLCRDEKVMAFPTLRWYDNGKAVAPEYKMDRTVTALVGFAKRKLEMNDKFKDWEKGAVDRGESDADIEKKRKLFSQSRTEHPSCQVSGHLMVNRVPGNFHIEAKSKNHNLNSAMTNLTHVVNHMSFGEPLDQQSRRAKRILKQVPEEHQQFNPMDNSMYLTKEFHQAYHHYIKVVSTHLNVGSTVANQ-MLTYQFLEQSQVVYYEESNVPEARFSYDLSPMSVVVEKEGRKWYDYLTSLCAIIGGTFTTLGLIDAVLYKVFKP 465          
BLAST of NO13G01760 vs. NCBI_GenBank
Match: XP_005853522.1 (hypothetical protein NGA_0271420 [Nannochloropsis gaditana CCMP526] >EKU22839.1 hypothetical protein NGA_0271420 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 381.7 bits (979), Expect = 2.600e-102
Identity = 191/371 (51.48%), Postives = 239/371 (64.42%), Query Frame = 0
Query:    1 MLDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREILHDDHHAELEVLLQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNWPERDREYV--------EHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFGPLYQDEVLTRLEKFSSEFYVSNS-LDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWG--KEDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFT 361
            MLD+PC FA VDVLDVLGTN+ N+TKNIEKWNLD+  +RR FQGRNRE+R+++HDD                      F  ++   E+ F +FYAPWCVWCQRLAPTWEAFAE +E +   IKV K+DCV H  LC +  + AFPTLRL+     + PDY  DRTV AL SY+ R L++  K  +     RE +        EHPGC+LSG LLVNRVPGNFHIEARSK HNLN   TN+SHVV+ L+FGP    E   +L      F  + S L  +++V+ + H A HHY+KVV T YEV + +G  K  +  YQM+  + VM Y  D+VPEAKFSY+ISP+A ++    R WYEF TSL  I+GGTFT
Sbjct:   26 MLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDXXXXXXXXXXXXXXXXXXXXXXFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKVASSAPEHREKIERTLFAEAEHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVTREYREKLALLPKGFQQTRSPLADQVYVVSKVHHAFHHYLKVVSTHYEVSRTFGGQKSTVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFT 396          
BLAST of NO13G01760 vs. NCBI_GenBank
Match: XP_002295231.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87535.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 353.2 bits (905), Expect = 1.000e-93
Identity = 180/408 (44.12%), Postives = 240/408 (58.82%), Query Frame = 0
Query:    1 MLDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREILHDDHHAELEVLLQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNW--------------PERDREYVEHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFG-PL-----------YQDEVLTRLEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKE-------DMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRLLRP 376
            ++DL C F  VDV D LGTNR N+TKNIEKW LDE+G+RR F GRNRE                                   + ++  F+  YAPWC+WCQRL PTWE F E V    +P+ V KVDCV H QLCKD+KV AFPTLR +     + PDY  DRTV AL  Y  R+L++E+K K+W              P       EHPGC +SGHL+VNRVPGNFHIEA+S  HNLNA  TNL+H VNHLSFG P+           +  +V   L++   E    N +D   +V  ++H+A HHY+KVV T   +      E        +  YQML ++ ++ Y   +VPEA+FSY++SPM+V+V++ GR+WY++ TSL  I+GGTFT +GL+D+TL+++ +P
Sbjct:   82 LMDLHCDFVSVDVWDTLGTNRQNVTKNIEKWQLDEDGQRRIFSGRNREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGHDMAFIDMYAPWCIWCQRLHPTWEKFGEKVHELGMPVGVGKVDCVVHAQLCKDEKVMAFPTLRWYKDGEAILPDYKMDRTVDALVGYAKRKLDMEQKYKDWESKNAGGNADARGKPRGGTSRPEHPGCQVSGHLMVNRVPGNFHIEAKSVNHNLNAAMTNLTHRVNHLSFGEPITKLPPHMENTPFMRKVKRVLKQVPEEHKQFNPMDDTEYVTAQFHQAFHHYIKVVSTHLNMGSSSKSEYSVNDVNAVTVYQMLEQSQIVFYDEVNVPEARFSYDMSPMSVVVQKEGRKWYDYLTSLCAIIGGTFTTLGLIDATLYKVFKP 489          
BLAST of NO13G01760 vs. NCBI_GenBank
Match: CBN74236.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 349.7 bits (896), Expect = 1.100e-92
Identity = 175/377 (46.42%), Postives = 247/377 (65.52%), Query Frame = 0
Query:    1 MLDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREILHDDHHAELEVLLQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESI---PIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNWPERDREYVEHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFGPLYQDEVLTRLEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKEDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRLLR 375
            ML LPC +A VDVLD+LGTN++N+T+NI KW+ DE G +R F GRN+ +  + HDDHH +L++  ++GEHA+PLT+ +F +++Q N+   V F+APWCVWC +LAPTWEAFAE VE ++     + VAKVDCV   +LC  Q + AFPT+R F        DY+ DR+V +L  Y   ++  +EK      R ++  ++PGC LSG ++VNRVPGNFHIEARS  H+++  + N+SHVV  L FG         R+ +   E     +L+ R++ +D  H A HHY+KVV T         K D   YQM+  +  M Y  D VPEAKFSY++SPM+V +K+  R+WY+F TS+  I+GGTFTVVG+LD+ L R+++
Sbjct:   73 MLALPCDYASVDVLDLLGTNKVNMTQNIVKWHTDENGVKREFHGRNKAQEMVKHDDHHRDLDLAHEDGEHAVPLTSSNFKDFIQGNDNVMVDFFAPWCVWCIKLAPTWEAFAEEVERDASLNGKLMVAKVDCVEERELCSTQNLMAFPTIRYFKGGVQDGTDYSKDRSVTSLVQYAQAKVGGDEKALRRYGRLKQ--DYPGCQLSGFIMVNRVPGNFHIEARSALHSIDPTAANISHVVKTLKFGTQVPVRG-RRVIESGVELEGLPALEDRVYSIDSLHTAPHHYIKVVSTFV---GGLAKTDNLQYQMMVSSQTMPYEQDQVPEAKFSYDLSPMSVHIKQRRRKWYDFLTSVLAIVGGTFTVVGVLDNILFRVVK 443          
The following BLAST results are available for this feature:
BLAST of NO13G01760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21843.16.500e-19483.20Thioredoxin domain protein [Nannochloropsis gadita... [more]
GAX20665.11.000e-10949.87hypothetical protein FisN_32Hh054 [Fistulifera sol... [more]
GAX12875.11.700e-10949.62hypothetical protein FisN_32Lh054 [Fistulifera sol... [more]
XP_002182871.12.500e-10848.48predicted protein [Phaeodactylum tricornutum CCAP ... [more]
EJK74922.14.200e-10847.28hypothetical protein THAOC_03372 [Thalassiosira oc... [more]
EWM21113.12.700e-10751.55Thioredoxin domain protein [Nannochloropsis gadita... [more]
OEU22912.16.300e-10446.85DUF1692-domain-containing protein [Fragilariopsis ... [more]
XP_005853522.12.600e-10251.48hypothetical protein NGA_0271420 [Nannochloropsis ... [more]
XP_002295231.11.000e-9344.12predicted protein [Thalassiosira pseudonana CCMP13... [more]
CBN74236.11.100e-9246.42conserved unknown protein [Ectocarpus siliculosus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL131nonsL131Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR069ngnoR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001724NSK001724Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01760.1NO13G01760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO13G01760.2NO13G01760.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596475gene_6830Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100051g23gene8598Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01760.1NO13G01760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO13G01760.2NO13G01760.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01760 ID=NO13G01760|Name=NO13G01760|organism=Nannochloropsis oceanica|type=gene|length=2743bp
ACAGGTAGCCCTGCTGCATCGTAAGCCCTGCTGCGCATCAGTCCTCAAAG
CAGCCAACCGAAAAAGAGAGGCAAAAAACAGAACGCAGCACTATTCAAAA
CTTTTGCCCAGTCCCGCCGCCGTCGCATATCACCTACACAACACGCCTAC
GCAACGCACTTGAGCCATGGCGACACAACGTTCCGGGGCCAAGGGCATGG
ATTTGTACCGGCGGGTGCCCGCTGACCTGACCGAGACGACCAGTCTGGGT
GGGCTCTTCTCCATCGTGGCGGGgtaagtgcgggggcagagtagatgggg
ctgaagtgtggagcaccaaccgcggtcgtagtgctctcacgctggaaatt
ggtttcagagactcaatctcattctcatttaatagGGTATTCATGGCCAT
TCTTTGTGTTGTGGAGATTATCAGCTTCATGTCGCACACTACCGAGACCA
TGGTGGTCCTTGATCAAAGCCACGACCAAATGGTACGTCTACGCCCGCCC
CTCCTTCCTTTCCTCCCTCCATCCCTACTCCTCTTACTCGCTTGGATTGT
CACGACAGAGCATGCATTCTCAATTCTGCATGACCAGCCACGGTGCCCTC
CCTTTTGCGTGTCCTAGGTGGGGTTAATCCTTGCTGCTCAATCCTCGCCT
CCCTCCCTCCTTCCGTCCCTGCATAGATTCGGATAAATTTCAATATCACC
ATGCTCGATCTTCCCTGTCGCTTCGCCGTCGTGGATGTACTCGACGTCTT
GGGTACCAACCGCATGAACATCACCAAGAACATTGAAAAATGGAACCTTG
ATGAGGAAGGGCGGCGTCGTTTTTTTCAAGGCCGCAATCGGGAAGAGCGC
GAAATCCTCCACGATGACCACCACGCCGAATTGGAAGTCCTGTTGCAAAA
TGGGGAGCATGCTATCCCGCTTACCGCCGACTCCTTCGACGAATACATGC
AGGCAAATGAGTTTACATTCGTCTCCTTTTACGCTCCCTGGTGCGTGTGG
TGCCAGCGCCTGGCGCCAACCTGGGAAGCCTTCGCGGAGCACGTGGAAGC
CGAAAGCATTCCAATCAAGGTGGCCAAGGTCGATTGTGTGACGCACACAC
AGTTGTGTAAAGACCAGAAAGTGCATGCTTTCCCTACTCTTCGTTTATTC
AACAGAGCGTCGCCGTTGCCACCCGATTATAACACGGACCGGACCGTGGC
GGCGCTGGCCAGCTATGTTACCCGGAGGTTGAACGTGGAGGAGAAGAGGA
AAAATTGGCCGGAGCGCGATAGGGAGTATGTGGAGCACCCGGGTTGTATG
gtacggtgagggagggattggggtagggagggaaggagggcgggtggagg
ttgcatatccattcgttaccgcattgcgcatccatttacccgcagaggct
tcacagtggaaaaggcaggtcggtaggatgtgtttgctaccgcataaggt
gtatcaccaatcatttcgtaaagacaagaccatctcatccctccgtcccg
tcctccctcccttcctctttgcctccctcagCTCTCGGGCCACTTGCTCG
TGAACCGCGTTCCCGGGAATTTCCACATCGAAGCAAGAAGCAAGGCCCAT
AACCTCAACGCTGTCTCGACAAACTTGTCACACGTCGTCAACCACCTCTC
TTTCGGGCCTTTGTATCAAGACGAAGTCTTGACTCGATTAGAAAAATTTT
CGTCGGAGTTTTACGTCTCCAATTCTTTGGATGGACGGATGTTTGTCCTG
GACGAGTACCACAAGGCACATCACCACTATGTTAAGGTGGTCGGGACATT
GTATGAGGTTCCGCAACGCTGGGGGAAGGAAGACATGTTCACCTATCAGA
TGCTGCCGGAGgtaaggaggaaggaagggagggagggagggcaaacagag
tggagaatcatatttgactaatgttttgacgtaacaaaaggggccaagca
tttcacaccaatggatgtattatcaccctatcaccaaatggctgtggatt
aagagtggatccccaagacggcgtttgtatgtaaatatggaaattcgaat
atatcgagccacagccccggaatgtttttcaagccgaacggtgctctggc
acattctagttgtccatatttacacacaattgcactcttggggatcgaca
cctcatctacaactatttggtgatagggtgataatacatccactacttga
ctcctttcattacgtccaaacatgagtcaatgagggtgatggcgatcggc
tttttctttcgcgacgtaattctcgataatttattcttacattccttcca
cccccttccccttaaatctcaaataaatgcatagACGTCTGTCATGTCCT
ACGCCGTGGACGATGTGCCCGAAGCGAAGTTTTCCTACGAAATCTCCCCC
ATGGCCGTGATTGTCAAGAGGACCGGCCGCCGATGGTATGAATTTGGCAC
CTCTCTTTTTGGTATCTTGGGAGGTACTTTCACCGTTGTGGGCTTATTGG
ACTCGACGTTGCATCGGCTTCTCAGGCCATCGACGAAACTAAGGTCTTAG
GGAGGGACAGAAGATGTGTAGACTGGAGGGAGGCAAGTGATGCTGCCAGT
GCAAGAGATAAAGACAGTTTAGGACAGATGAGCTACGCAACAGCAGCAGT
AGCAACACGCAATTAAAAAACCAAAACAGCAGCGACAACGAAAAAGCACC
AATTCGTCAATGGAAATGTACGGGAAAACAAGTCGAATGCGCG
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protein sequence of NO13G01760.1

>NO13G01760.1-protein ID=NO13G01760.1-protein|Name=NO13G01760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=458bp
MATQRSGAKGMDLYRRVPADLTETTSLGGLFSIVAGVFMAILCVVEIISF
MSHTTETMVVLDQSHDQMIRINFNITMLDLPCRFAVVDVLDVLGTNRMNI
TKNIEKWNLDEEGRRRFFQGRNREEREILHDDHHAELEVLLQNGEHAIPL
TADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKV
AKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVT
RRLNVEEKRKNWPERDREYVEHPGCMLSGHLLVNRVPGNFHIEARSKAHN
LNAVSTNLSHVVNHLSFGPLYQDEVLTRLEKFSSEFYVSNSLDGRMFVLD
EYHKAHHHYVKVVGTLYEVPQRWGKEDMFTYQMLPETSVMSYAVDDVPEA
KFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRLLR
PSTKLRS*
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protein sequence of NO13G01760.2

>NO13G01760.2-protein ID=NO13G01760.2-protein|Name=NO13G01760.2|organism=Nannochloropsis oceanica|type=polypeptide|length=382bp
MLDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREER
EILHDDHHAELEVLLQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVW
CQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLF
NRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNWPERDREYVEHPGCM
LSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFGPLYQDEVL
TRLEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKE
DMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTS
LFGILGGTFTVVGLLDSTLHRLLRPSTKLRS*
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Synonyms
Publications