NO12G03410, NO12G03410 (gene) Nannochloropsis oceanica

Overview
NameNO12G03410
Unique NameNO12G03410
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2124
Alignment locationchr12:935834..937957 -

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Properties
Property NameValue
DescriptionIntegral membrane protein TerC
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:935834..937957 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR022369Integral_membrane_TerC_rswitch
IPR005496Integral_membrane_TerC
Homology
BLAST of NO12G03410 vs. NCBI_GenBank
Match: XP_005853957.1 (hypothetical protein NGA_0432601 [Nannochloropsis gaditana CCMP526] >EKU22401.1 hypothetical protein NGA_0432601 [Nannochloropsis gaditana CCMP526] >EWM25697.1 Integral membrane protein TerC [Nannochloropsis gaditana])

HSP 1 Score: 491.1 bits (1263), Expect = 3.000e-135
Identity = 265/334 (79.34%), Postives = 293/334 (87.72%), Query Frame = 0
Query:   50 APLPKWTTRRGGLQNPFRK----HKQTAPPVESTTS--------NKAPAVTKIDPAVAYSTAVRRTMLAVGAACAFGFGLWYIEGKKSAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPFEYQSRALTWGIVGAVAMRGVMISVGVAAIQRFRWVVLMFAGILLGSAFKLLAETGHEGGEEDLSDNLMLRVAKKCVNAVDEYDGNKFFTKRNGKRFATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNTLEYIKPSVALVLAFVGGKMIAEFFHVEVPISVSLLVVMSLLGGGIGLSVLKQRFTAR 372
            A LP+W + RGGL  PFR+    H +TA  V+  +S         K+PA   ID   AY+TAVRRT+LAVGAA AFGFGLW++EG++ AMEFFAGYLIEESLSVDNIFVFIMLFEYFKVP EYQSRAL+WGI+GAVAMRG+MI VGVAAIQRFRWVVL+FAG+LLGSAFKLLAE GHEGGEEDLS+NL++  AKK V+AVDEYDG+ FFT+RNGKR+ATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVN+LEYIKPSVALVLAFVGGKM+AEFFHVEVPISVSL VVMSLLGGGIGLS+LKQR  AR
Sbjct:   49 AHLPQWVSSRGGLTLPFRQQQIAHAKTATVVKGPSSKGKAVGKRGKSPAA--IDAGEAYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQRVLAR 380          
BLAST of NO12G03410 vs. NCBI_GenBank
Match: CBJ27914.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 321.6 bits (823), Expect = 3.200e-84
Identity = 158/274 (57.66%), Postives = 217/274 (79.20%), Query Frame = 0
Query:   96 YSTAVRRTMLAVGAACAFGFGLWYIEGKKSAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPFEYQSRALTWGIVGAVAMRGVMISVGVAAIQRFRWVVLMFAGILLGSAFKLLAETGHEGGEEDLSDNLMLRVAKKCVNAVDEYDGNKFFTK--RNGKRFATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNTLEYIKPSVALVLAFVGGKMIAEFFHVEVPISVSLLVVMSLLGGGIGLSVLKQR 368
            Y  AV+RT++++  +C FG       G++S +EFFAGYL+E+SLSVDN+FVF+M F+YF+VP E+Q R LTWGIVGA+ MRGVMI+ GVAA++RF+W+ ++FA ILL S++KLL E+  E  + DLS N ++R++K+ V AVDEYDG++FFT+    GK  ATPL +CL+CIELSDFVFAVDSIPAVLG+S+DP +V++SN+FAIM LRS+Y ++A AV+ L Y+KP+VALVL FVG KM+ E+ H+ +    SL VV+SL+ GG+GLS+L +R
Sbjct:  112 YRMAVKRTVMSIALSCGFGLATMLFRGRQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEE--DHDLSQNTLVRMSKRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARR 383          
BLAST of NO12G03410 vs. NCBI_GenBank
Match: XP_009036180.1 (hypothetical protein AURANDRAFT_37330 [Aureococcus anophagefferens] >EGB09054.1 hypothetical protein AURANDRAFT_37330 [Aureococcus anophagefferens])

HSP 1 Score: 298.9 bits (764), Expect = 2.200e-77
Identity = 156/266 (58.65%), Postives = 202/266 (75.94%), Query Frame = 0
Query:  102 RTMLAVGAACAFGFGLWYIEGKKSAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPFEYQSRALTWGIVGAVAMRGVMISVGVAAIQRFRWVVLMFAGILLGSAFKLLAETGHEGGEEDLSDNLMLRVAKKCVNAVDEYDGNKFFTKRNGKRFATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNTLEYIKPSVALVLAFVGGKMIAEFFHVEVPISVSLLVVMSLLGGGIGLSVLKQR 368
            +T+ AV +A AFG  LWY  G+ SA+ FF+GYL+E+SLSVDN+FVFIMLFEYF+VP  +Q R L+WGIVGA+ MRGVMI  GVAA++RFRW  L+FAGILL S+ KLL E G E  +ED+ DNL++R+++K V A  EYDG++FFT  +G + ATPL +CL+C+ELSD VFAVDSIPAVLG+S DP +VYSSN+FAI  LR+LY LVA AV+++ Y+KP+V  VL F+  KMI E+FH  +    SL VV+ LL  G   S+L  +
Sbjct:   16 QTVWAVASATAFGLILWYARGRDSAIAFFSGYLVEQSLSVDNLFVFIMLFEYFRVPPAFQQRVLSWGIVGAILMRGVMIVAGVAAVKRFRWTSLLFAGILLLSSVKLLME-GDE--DEDVGDNLVMRLSRKLVGATTEYDGDRFFTVVDGAKRATPLLLCLVCVELSDVVFAVDSIPAVLGISTDPFVVYSSNVFAIAGLRALYALVAKAVDSMVYLKPAVCAVLVFISVKMILEYFHYAIGTGASLCVVVCLLALGAAASLLASK 278          
BLAST of NO12G03410 vs. NCBI_GenBank
Match: EJK75512.1 (hypothetical protein THAOC_02764 [Thalassiosira oceanica])

HSP 1 Score: 293.5 bits (750), Expect = 9.300e-76
Identity = 147/272 (54.04%), Postives = 208/272 (76.47%), Query Frame = 0
Query:   96 YSTAVRRTMLAVGAACAFGFGLWYIEGKKSAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPFEYQSRALTWGIVGAVAMRGVMISVGVAAIQRFRWVVLMFAGILLGSAFKLLAETGHEGGEEDLSDNLMLRVAKKCVNAVDEYDGNKFFTKRNGKRFATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNTLEYIKPSVALVLAFVGGKMIAEFFHVEVPISVSLLVVMSLLGGGIGLSVLKQR 368
            Y  A++RT+L VG A AFG GL  + G  +A EFFAGYL+E+SLSVDN+FVF++LFEYF+VP   Q R L WGI GA+ MR VMI VG AA++ FR ++L+FA IL+ S+ K L     +  EEDL+DN +++ ++K  ++ D++DG+ FFT  +G + ATPLF+C+I +E+SD VFAVDSIPAV GV+++PL+V+SSN+FAIM LRSLYT+++ A + L+Y++P+V +VL F+G KMIAE+F  EVP  ++L VV ++L GG+GLSV ++R
Sbjct:   65 YQQAIQRTLLWVGLAVAFGSGLGVLVGPDTAEEFFAGYLVEQSLSVDNLFVFLLLFEYFQVPLRSQDRVLNWGIYGAIVMRAVMIGVGAAALKEFRAILLVFAAILVYSSAKTLIPGDEDEEEEDLNDNAIVKFSRKLFDSTDQFDGSNFFTMVDGVKMATPLFICMIALEISDVVFAVDSIPAVFGVTENPLVVFSSNMFAIMGLRSLYTILSQAASDLKYLEPAVGVVLGFIGSKMIAEYFGTEVPTEIALGVVATVLSGGVGLSVWERR 336          
BLAST of NO12G03410 vs. NCBI_GenBank
Match: XP_005854349.1 (hypothetical protein NGA_0191400 [Nannochloropsis gaditana CCMP526] >EKU22015.1 hypothetical protein NGA_0191400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 292.4 bits (747), Expect = 2.100e-75
Identity = 156/273 (57.14%), Postives = 205/273 (75.09%), Query Frame = 0
Query:   92 PAVAYSTAVRRTMLAVGAACAFGFGLWYIEGKKSAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPFEYQSRALTWGIVGAVAMRGVMISVGVAAIQRFRWVVLMFAGILLGSAFKLLAETGHEGGEEDLSDNLMLRVAKKCVNAVDEYDGNKFFTKRNGK-RFATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNTLEYIKPSVALVLAFVGGKMIAEFFHVEVPISVSLLVVMSLLGGGIGLSV 364
            P   Y  A  +T L+VG+A  FG G+W  +G  S +E++AGYL+E+SLSVDN+FVF++LFEYFKVP ++Q R L+WGI GA+AMR VM+  GV AI+ FR V+L FAGIL+ ++ KLLAE   EGGEEDL+DN +++ A+  +  VD YDG  FFT+  G+ R ATPL + LIC+ELSD VFAVDS+PAV GV+KDP IVY+SNIFAI+ LRSLYT++A A+  L Y+KP+VAL+L  VG K+ AE+F  EV  +VSL V+ SLLG G+  S+
Sbjct:   36 PEHPYRDAFVKTGLSVGSALLFGLGVWAWKGADSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDFQGRVLSWGIFGAMAMRAVMVFAGVEAIENFRVVLLAFAGILIFTSVKLLAEDEGEGGEEDLADNQIVKFARSLITTVDTYDGPNFFTEVPGQGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGLKLGAEYFGFEVSNAVSLGVITSLLGSGVWASL 308          
BLAST of NO12G03410 vs. NCBI_GenBank
Match: EWM26331.1 (Integral membrane protein TerC [Nannochloropsis gaditana])

HSP 1 Score: 292.0 bits (746), Expect = 2.700e-75
Identity = 169/344 (49.13%), Postives = 232/344 (67.44%), Query Frame = 0
Query:   32 LLTQSPEPLAPASTTS---PLAPLPKWTTRRGGLQN--------PFRKHKQTAPPVESTTSNKAPAVTKIDPAVAYSTAVRRTMLAVGAACAFGFGLWYIEGKKSAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPFEYQSRALTWGIVGAVAMRGVMISVGVAAIQRFRWVVLMFAGILLGSAFKLLAETGHEGGEEDLSDNLMLRVAKKCVNAVDEYDGNKFFTKRNGK-RFATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNTLEYIKPSVALVLAFVGGKMIAEFFHVEVPISVSLLVVMSLLGGGIGLSV 364
            L  + P+ L P+ T S   PL   P+   RR    +        P ++  ++ P +++  +      +   P   Y  A  +T L+VG+A  FG G+W  +G  S +E++AGYL+E+SLSVDN+FVF++LFEYFKVP ++Q R L+WGI GA+AMR VM+  GV AI+ FR V+L FAGIL+ ++ KLLAE   EGGEEDL+DN +++ A+  +  VD YDG  FFT+  G+ R ATPL + LIC+ELSD VFAVDS+PAV GV+KDP IVY+SNIFAI+ LRSLYT++A A+  L Y+KP+VAL+L  VG K+ AE+F  EV  +VSL V+ SLLG G+  S+
Sbjct:   49 LAPRIPQLLVPSCTPSFSAPLVAAPRNAARRRRASSMPPFHALGPKKQESESVPKIKAVGNAGEFDGSIWHPEHPYRDAFVKTGLSVGSALLFGLGVWAWKGADSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDFQGRVLSWGIFGAMAMRAVMVFAGVEAIENFRVVLLAFAGILIFTSVKLLAEDEGEGGEEDLADNQIVKFARSLITTVDTYDGPNFFTEVPGQGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGLKLGAEYFGFEVSNAVSLGVITSLLGSGVWASL 392          
BLAST of NO12G03410 vs. NCBI_GenBank
Match: XP_002180515.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC47923.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 280.0 bits (715), Expect = 1.100e-71
Identity = 144/274 (52.55%), Postives = 201/274 (73.36%), Query Frame = 0
Query:  107 VGAACAFGFGLWYIEGKKSAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPFEYQSRALTWGIVGAVAMRGVMISVGVAAIQRFRWVVLMFAGILLGSAFK----LLAETGHEGGEEDLSDNLMLRVAKKCVNAVDEYDGNKFFTKRNGKRFATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNTLEYIKPSVALVLAFVGGKMIAEFFHVEVPISVSLLVVMSLLGGGIGLSVLKQRFTARNAETK 377
            VGAAC FG  +W   G +S  EFFAGYLIE+SLSVDN+FVF++LFEYFKVP  +Q R L WGI GA+ MRG+MI +G AA++++  ++L+FA IL+  + K    L+     +  EED  +N ++R A+    + +EYDG++FFT+ +G R ATPLF+C++ +E+SD VFAVDSIPAV GV++DP+IV++SN+FAIM LRSLYT+++ A   L+Y++P+VALVL F+G KMIAE+F   +P +V+LLVV SLLG G+G SV  ++      E K
Sbjct:    1 VGAACTFGGVVWATMGSESGAEFFAGYLIEQSLSVDNLFVFLLLFEYFKVPLAFQDRVLNWGIYGAIVMRGIMIGLGAAALEQYHGILLVFAAILVYGSGKFFWGLVTNDEDDEVEEDPGENTIVRFARSVFPSTEEYDGDRFFTQVDGIRKATPLFVCMVAVEISDVVFAVDSIPAVFGVTEDPIIVFTSNLFAIMGLRSLYTILSKAATDLKYLEPAVALVLGFIGCKMIAEYFGYVIPTNVALLVVGSLLGTGVGASVYDKQQRLNTNEEK 274          
BLAST of NO12G03410 vs. NCBI_GenBank
Match: XP_001421511.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO99804.1 predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 279.3 bits (713), Expect = 1.800e-71
Identity = 142/258 (55.04%), Postives = 196/258 (75.97%), Query Frame = 0
Query:  107 VGAACAFGFGLWYIEGKKSAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPFEYQSRALTWGIVGAVAMRGVMISVGVAAIQRFRWVVLMFAGILLGSAFKLLAETGHEGGEEDLSDNLMLRVAKKCVNAVDEYDGNKFFTKRNGKRFATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNTLEYIKPSVALVLAFVGGKMIAEFFHVEVPISVSLLVVMSLLGGGIGLSVL 365
            +G +CAFG G+  +EG   A E+FAGYL+E+SLSVDN+FVF++LFEYFKVP E Q+R L +GIVGA+ MR VM+  GV  I+ F+ ++L+FAGIL+ S++KLLAE   E  EED+ DN +++     +   ++YDG+ FFT +NG + ATPL + L  +E+SD VFAVDSIPAV GV+KDP IVY+SN+FAI++LR LYTL++ AV  L+Y++ +VALVL F+G KMI E+  VEVP   SL VV+++LGGG+G S++
Sbjct:   18 LGVSCAFGAGIGAVEGADKASEYFAGYLLEQSLSVDNLFVFVLLFEYFKVPPERQTRVLNYGIVGALVMRAVMVGAGVELIENFQPILLVFAGILIFSSYKLLAEGEEE--EEDMGDNAIVKFVGNFLEVSEDYDGDNFFTVQNGVKMATPLLLVLAVVEISDVVFAVDSIPAVFGVTKDPFIVYTSNLFAILSLRQLYTLISKAVGELKYLQTAVALVLGFIGAKMIVEYAGVEVPTEASLAVVVTMLGGGVGASLM 273          
BLAST of NO12G03410 vs. NCBI_GenBank
Match: GAX26895.1 (hypothetical protein FisN_9Lh191 [Fistulifera solaris])

HSP 1 Score: 273.9 bits (699), Expect = 7.700e-70
Identity = 155/344 (45.06%), Postives = 222/344 (64.53%), Query Frame = 0
Query:   25 DSRRAARLLTQSPEPLAPASTTSPLAPLPKW-----TTRRGGLQNPFRKHKQTAPPVESTTSNKAPAVTKIDPAVAYSTAVRRTMLAVGAACAFGFGLWYIEGKKSAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPFEYQSRALTWGIVGAVAMRGVMISVGVAAIQRFRWVVLMFAGILLGSAFKLLAETGHEGGEEDLSDNLMLRVAKKCVNAVDEYDGNKFFTKRNGKRFATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNTLEYIKPSVALVLAFVGGKMIAEFFHVEVPISVSLLVVMSLLGGGIGLSV 364
            DS  + ++L    +P+  +ST   ++P  ++     T    G+  PF                   +VT      +Y  AV RT+  V  A  FG  LW + G     EFFAGYL+E+SLSVDN+FVF++LFEYFKVP + Q R L WGI GA+ MR VMI +G AA+Q+F  ++L+FA IL+ S+ K       EG EED S N +++ ++  + + DE+ G KFFT  +G + ATPLF+C+I +E+SD VFAVDSIPAV GV+++PLIV+SSN+FAIM LRS+YT+++ A   L+Y++P+VALVL F+G KM+AE+F+ E+P +++L VV SLL  G+G S+
Sbjct:   53 DSTTSCKVLNGGNQPIMTSSTIQFMSPTEEFVDAQTTNSSDGIPPPF-------------------SVTLEKDDYSYKEAVLRTLGWVSLAGVFGCVLWAVGGSTVGEEFFAGYLVEQSLSVDNLFVFLLLFEYFKVPVKLQDRVLNWGIYGAIIMRAVMIGLGAAALQQFHAILLVFASILIYSSAKFFI-GDEEGEEEDPSQNTIVKFSRSLIPSTDEFHGKKFFTIEDGMKKATPLFICMIAVEISDVVFAVDSIPAVFGVTENPLIVFSSNMFAIMGLRSMYTILSKAATDLKYLEPAVALVLGFIGSKMVAEYFNYEIPTNIALGVVASLLISGVGASI 376          
BLAST of NO12G03410 vs. NCBI_GenBank
Match: XP_002290013.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED93550.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 272.3 bits (695), Expect = 2.200e-69
Identity = 138/271 (50.92%), Postives = 197/271 (72.69%), Query Frame = 0
Query:   96 YSTAVRRTMLAVGAACAFGFGLWYIEGKKSAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPFEYQSRALTWGIVGAVAMRGVMISVGVAAIQRFRWVVLMFAGILLGSAFKLLAETGHEGGEEDLSDNLMLRVAKKCVNAVDEYDGNKFFTKRNGKRFATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNTLEYIKPSVALVLAFVGGKMIAEFFHVEVPISVSLLVVMSLLGGGIGLSVLKQ 367
            Y  A++RT+L VG A AFG  L  I    ++ EFFAGYL+E+SLSVDN+FVF++LFEYFKVP   Q R L WGI GA+ MR +MI +G AA+++F  ++L+FA IL+ S+ K L           L+DN +++ ++  +++VDE+DG+ FFT  +G + ATPLF+C++ +E+SD VFAVDSIPAV GV+ +PL+V+SSN+FAIM LRSLYT+++ A   L+Y++P+V +VL F+G KMIAE+F  E+P  V+L VV   L GG+ LSV ++
Sbjct:    5 YKQAIQRTILWVGLAVAFGSALGIIVDPATSEEFFAGYLVEQSLSVDNLFVFLLLFEYFKVPLSSQDRVLNWGIYGAIVMRALMIGLGAAALEKFHAILLVFAAILVYSSAKTLIPEDXXXXXXXLNDNAIVKFSRNLIDSVDEFDGSNFFTMVDGVKKATPLFICMVSLEISDVVFAVDSIPAVFGVTSNPLVVFSSNMFAIMGLRSLYTILSKAATDLKYLEPAVGIVLGFIGSKMIAEYFGAEIPTEVALGVVAFFLTGGVALSVAEK 275          
The following BLAST results are available for this feature:
BLAST of NO12G03410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853957.13.000e-13579.34hypothetical protein NGA_0432601 [Nannochloropsis ... [more]
CBJ27914.13.200e-8457.66conserved unknown protein [Ectocarpus siliculosus][more]
XP_009036180.12.200e-7758.65hypothetical protein AURANDRAFT_37330 [Aureococcus... [more]
EJK75512.19.300e-7654.04hypothetical protein THAOC_02764 [Thalassiosira oc... [more]
XP_005854349.12.100e-7557.14hypothetical protein NGA_0191400 [Nannochloropsis ... [more]
EWM26331.12.700e-7549.13Integral membrane protein TerC [Nannochloropsis ga... [more]
XP_002180515.11.100e-7152.55predicted protein, partial [Phaeodactylum tricornu... [more]
XP_001421511.11.800e-7155.04predicted protein [Ostreococcus lucimarinus CCE990... [more]
GAX26895.17.700e-7045.06hypothetical protein FisN_9Lh191 [Fistulifera sola... [more]
XP_002290013.12.200e-6950.92predicted protein, partial [Thalassiosira pseudona... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010301NSK010301Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03410.3NO12G03410.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO12G03410.2NO12G03410.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO12G03410.1NO12G03410.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592800gene_5514Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100222g3gene4812Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03410.3NO12G03410.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO12G03410.2NO12G03410.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO12G03410.1NO12G03410.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03410 ID=NO12G03410|Name=NO12G03410|organism=Nannochloropsis oceanica|type=gene|length=2124bp
AGGGAGATCTGTACCACGCGCCAGAATCTGCAGCAATTGCCATCGCGCCT
TCCCCACTCGCTACATCACCATGCGCGCCTTCTATTTTTGCCTCTTAGGC
TTGGCGGCTTCTTCATGTGATGTGTCGCCTTCGTCCCTGTCAGACAGCAG
GCGGGCTGCACGGTTGTTGACACAATCACCAGgtatgatttaataactat
ctttacatgtgtaagcggtatgccttggccccgtgtggctaccatcatcc
tcatttcaagtcgcactcccctcttccagttcttccacacacgtcagacc
ccttccaagctgaaatccccctcctttttgggtggcgtgttaaagcgtaa
ccctaaccttaagaaagatgaaatttacaggtgtatttccattttcgttc
ttcctcccccttatttatcaacagAGCCCTTGGCTCCCGCATCCACCACC
TCGCCCTTGGCCCCCCTTCCCAAGTGGACCACGCGCCGAGGCGGGCTTCA
AAACCCCTTTCGAAAGCATAAGCAAACTGCCCCGCCCGTCGAAAGCACGA
CTAGCAACAAGGCACCTGCAGTTACCAAGATCGATCCTGCGGTTGCCTAC
AGCACGGCGGTTCGCCGAACAATGCTTGCGGTAGGCGCCGCGTGTGCCTT
CGGGTTTGGCTTGTGGTACATCGAGGGAAAGAAGTCTGCAATGGAGTTTT
TTGCCGGGTATCTGATCGAGGAAAGTCTGAGTGTGGATAATATTTTTGTC
TTCATCATGCTGTTCGAGTACTTTAAGgtaagaagcggggaaagggagga
tgtggtagcgttgacagaggaaaattgcgcgaaaggttcattgcttttac
gcagaatactccacagtttcgtttcttcacttctctttacctcctttcag
GTTCCCTTTGAATACCAATCGCGTGCCCTAACGTGGGGAATTGTCGGGGC
GGTCGCCATGCGGGGTGTGATGATCTCCGTGGGAGTGGCCGCGATTCAGA
GGTTCCGATGGGTGGTGTTAATGTTCGCCGGTATATTGCTGGGGAGCGCG
TTCAAGCTGCTGGCGGAAACGGGGCATGAAGGGGGGGAGGAGGATTTGAG
CGACAACTTGATGTTGAGGGTGGCGAAGAAATGTGTGAATGCCGTGGATG
AGTACGATGGGAACAAGTTCTTCACGAAGAGGAACGGAAAGCGATTCGCG
ACGCCCCTGTTCATGTGCTTGATTTGTATTGAACTGTCAGATTTCGTGTT
TGCCGTGGACTCCATTCCGGCGGTGTTGGGCGTGTCCAAGgtatgtgatg
ctccctcccttctgtcttattcccggttgtgttttggagggttcaatcgc
agcatcttgataagcacaaacgtcacttccctgactttttccttgcctcc
ctccctcccgtcctccctccctccttcccctctcttatcctttagGACCC
CCTCATTGTCTACTCCTCCAACATCTTCGCCATCATGGCCCTGCGTTCCC
TCTACACGCTGGTGGCCACTGCTGTCAACACGCTCGAGTACATCAAGCCC
TCTGTGGCGTTAGTCTTGGCCTTTGTCGGGGGCAAGATGATCGCGGAGTT
CTTTCATGTGGAAGTCCCCATCTCAGTGTCCCTTTTGGTGGTGATGTCCT
TGTTGGGTGGAGGGATTGGATTGAGCGTGTTAAAGCAGAGGTTTACTGCG
AGAAACGCGGAAACAAAGCGGTAGATGGAGAGCAGGGGGGGGAGGGGTGT
AGTGTACATTTCTCACATTATGTGGCCAGTTGTGAGAGTGAGATCGGGAG
AGAAGGTGAGAGGGAAGGTGGGAGGGACAACTGCGTTCATTAGTTGGTCT
GCGGTGGGAGGTGAAACGGGAGTTTCGTGAGGAAATCATGAAAAGAGCAC
GATACGCTAAAAAAAATGCTCAGAGAGAACTGCTCTTCTGCGTGCGTGAC
CTCCCCACACAGGCCAACACCCTCCCAACGCAAGCTAGCATTGCATGAAG
TTAAAAAACAGATAGATCATTGACGCAAAGCGGTGCATACCTTAGCTAGC
TATTATTGACATTCCTGTGAGATTTCTCCCTACCGCCGGAGACACATTTT
GCACAATGTCTTGGCCTTGACAAT
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protein sequence of NO12G03410.3

>NO12G03410.3-protein ID=NO12G03410.3-protein|Name=NO12G03410.3|organism=Nannochloropsis oceanica|type=polypeptide|length=409bp
MPWPRVATIILISSRTPLFQFFHTRQTPSKLKSPSFLGGVLKRNPNLKKD
EIYRCISIFVLPPPYLSTEPLAPASTTSPLAPLPKWTTRRGGLQNPFRKH
KQTAPPVESTTSNKAPAVTKIDPAVAYSTAVRRTMLAVGAACAFGFGLWY
IEGKKSAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPFEYQSRALTWGI
VGAVAMRGVMISVGVAAIQRFRWVVLMFAGILLGSAFKLLAETGHEGGEE
DLSDNLMLRVAKKCVNAVDEYDGNKFFTKRNGKRFATPLFMCLICIELSD
FVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNTLEYIK
PSVALVLAFVGGKMIAEFFHVEVPISVSLLVVMSLLGGGIGLSVLKQRFT
ARNAETKR*
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protein sequence of NO12G03410.2

>NO12G03410.2-protein ID=NO12G03410.2-protein|Name=NO12G03410.2|organism=Nannochloropsis oceanica|type=polypeptide|length=376bp
MRAFYFCLLGLAASSCDVSPSSLSDSRRAARLLTQSPEPLAPASTTSPLA
PLPKWTTRRGGLQNPFRKHKQTAPPVESTTSNKAPAVTKIDPAVAYSTAV
RRTMLAVGAACAFGFGLWYIEGKKSAMEFFAGYLIEESLSVDNIFVFIML
FEYFKVPFEYQSRALTWGIVGAVAMRGVMISVGVAAIQRFRWVVLMFAGI
LLGSAFKLLAETGHEGGEEDLSDNLMLRVAKKCVNAVDEYDGNKFFTKRN
GKRFATPLFMCLICIELSDFVFAVDSIPAVLGVSKVCDAPSLLSYSRLCF
GGFNRSILISTNVTSLTFSLPPSLPSSLPPSPLLSFRTPSLSTPPTSSPS
WPCVPSTRWWPLLSTRSSTSSPLWR*
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protein sequence of NO12G03410.1

>NO12G03410.1-protein ID=NO12G03410.1-protein|Name=NO12G03410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=378bp
MRAFYFCLLGLAASSCDVSPSSLSDSRRAARLLTQSPEPLAPASTTSPLA
PLPKWTTRRGGLQNPFRKHKQTAPPVESTTSNKAPAVTKIDPAVAYSTAV
RRTMLAVGAACAFGFGLWYIEGKKSAMEFFAGYLIEESLSVDNIFVFIML
FEYFKVPFEYQSRALTWGIVGAVAMRGVMISVGVAAIQRFRWVVLMFAGI
LLGSAFKLLAETGHEGGEEDLSDNLMLRVAKKCVNAVDEYDGNKFFTKRN
GKRFATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMA
LRSLYTLVATAVNTLEYIKPSVALVLAFVGGKMIAEFFHVEVPISVSLLV
VMSLLGGGIGLSVLKQRFTARNAETKR*
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Synonyms
Publications