NO10G02420, NO10G02420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G02420 vs. NCBI_GenBank
Match: EWM25406.1 (dna topoisomerase 6 subunit a [Nannochloropsis gaditana]) HSP 1 Score: 746.1 bits (1925), Expect = 8.200e-212 Identity = 373/398 (93.72%), Postives = 388/398 (97.49%), Query Frame = 0 Query: 189 LTSVGSSKVDKVLEEVRLLMLRSRRYDAPNPSLAELGITTVREVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 +T VG+SKVDKVLEEVR LMLRSRR DAPNP+LA+LGITTVREVSDMAPEGVL+EIE+T+L AGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATR FLNPREVRKTAITTRI+QLVHEVLSKGIHITKRDMFYTDVKLF+DQK+SDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGD+IDCTRMGVGGKAIPPY+DKIA IQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLK ELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKY IP QCRLDMT+HDMRTGRQLLQE+FIQKNPEWVKEL+LMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI Sbjct: 176 VTGVGNSKVDKVLEEVRQLMLRSRRDDAPNPTLADLGITTVREVSDMAPEGVLFEIEKTILAAAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRAFLNPREVRKTAITTRIMQLVHEVLSKGIHITKRDMFYTDVKLFRDQKDSDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDFIDCTRMGVGGKAIPPYVDKIACIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKTELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYGIPPQCRLDMTDHDMRTGRQLLQEDFIQKNPEWVKELQLMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 573
BLAST of NO10G02420 vs. NCBI_GenBank
Match: CBJ26510.1 (DNA topoisomerase VI subunit A [Ectocarpus siliculosus]) HSP 1 Score: 575.5 bits (1482), Expect = 1.900e-160 Identity = 288/413 (69.73%), Postives = 342/413 (82.81%), Query Frame = 0 Query: 192 VGSSKVDKVLEEVRLLMLRSRRY--------------DA---PNPSLAELGIT-TVREVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 + S+K K+ ++V +++ R R+ DA P+L ELG++ V EV +M GV+ EIE+ ++ A I+ G GF ++VPTRS+ NQ Y+ ELDRIVL DKV++R F++ RKTAITTR++QLVH+VL KGIHITKRDMFYTDVKLFK+Q ESD VLDDVACM+GCTRSCLNVVAS+KGLVVGRV F EDGD IDCTRMGVGGKAIPPYIDKI I+SDA FILLVEKEAAYMR+AEDRFY KYPCIVITAKGQPDVATRLFLK+LK EL+IPV+GLVDSDPYGLKILSVYM+GSKNMSYDSASLTT DIKWLGVRPSDLD+YNIP QCRLDMTEHD++TG++LLQE+FI+KN W +ELELM+K KKKAEIQ+LSAFGFQY+T++YLP+KL+ GDW+ Sbjct: 227 LSSAKPAKLADDVEVVLRRLRKLRGQMGRXXXXXADGDADRKKQPTLLELGLSGDVTEVREMGAAGVMDEIERIAVETALSIMEGNGFGFRVPTRSSGNQKYVEELDRIVLGDKVSSRNFVSTAMARKTAITTRVVQLVHQVLGKGIHITKRDMFYTDVKLFKEQSESDNVLDDVACMVGCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYIDKITNIRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQEDFIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTQNYLPQKLQNGDWV 639
BLAST of NO10G02420 vs. NCBI_GenBank
Match: XP_009821956.1 (hypothetical protein H257_00790 [Aphanomyces astaci] >ETV89556.1 hypothetical protein H257_00790 [Aphanomyces astaci]) HSP 1 Score: 559.7 bits (1441), Expect = 1.100e-155 Identity = 267/368 (72.55%), Postives = 317/368 (86.14%), Query Frame = 0 Query: 219 PSLAELGITTVREVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 P+LAEL + VREV +M P V EIE V+ V ILRGEGF Y VP+R+ NQ+Y+ ELDRIVL+DK++ R F N VRKTAITT++++LVH++L+KGIH+TKRD+FYTDVKLFKDQ ESD +LDDVACM+GCTRS L+VVASEKG+VVGR+ F +DGD IDCTRMGVGGKAIPPYID++ I SDAKFILLVEK+AA+MRLAEDRFYNKYPCI++TAKGQPDVATR+FLK+++ ELH+PVLGLVDSDPYGLKILSVYM+GSKNMSYDSASLT DIKWLGVRPSDL KY IP QCRL M E D++TG+ +L+EEFI+KNP W KELELMLK K+KAEIQALS FGFQ++T++YLP+KL GDWI Sbjct: 74 PTLAELNVFNVREVREMVPTEVSTEIESMVVGVVSSILRGEGFRYAVPSRTTANQIYVTELDRIVLADKLSVRDFTNMSAVRKTAITTKVMELVHQLLAKGIHVTKRDLFYTDVKLFKDQSESDTILDDVACMVGCTRSSLHVVASEKGVVVGRIAFRDDGDLIDCTRMGVGGKAIPPYIDRLTDITSDAKFILLVEKDAAFMRLAEDRFYNKYPCIILTAKGQPDVATRMFLKRIQNELHLPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTCRDIKWLGVRPSDLTKYKIPDQCRLPMKETDIKTGKDMLEEEFIKKNPLWSKELELMLKSKEKAEIQALSTFGFQFLTQEYLPQKLRDGDWI 441
BLAST of NO10G02420 vs. NCBI_GenBank
Match: GAQ77576.1 (Topoisomerase 6 subunit A homolog 3 [Klebsormidium nitens]) HSP 1 Score: 539.7 bits (1389), Expect = 1.200e-149 Identity = 262/390 (67.18%), Postives = 325/390 (83.33%), Query Frame = 0 Query: 198 DKVLEEVRLLMLRSRRYDAPNPSLAELGITTV-REVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 D++L +V L ++ + +L +L + V +EV D+ V+ EIE+T+L VA IL G GF Y +PTR++ NQLY+ +LDRIVL DK + R + N VRKTAITTRILQL+H++ +KGIH+TKRD+FYTDVKLF++Q +SD +LDDV+CMLGCTRS LNVV SEKG+VVGR+ F EDGD IDCT+MGVGGKAIPP IDK+ QSDAKFILLVEK+AA+MRLAEDRFYN++PC++ITAKGQPDVATRLFLKK+K EL IPVLGLVDSDPYGLKILSVYM+GSKNMSYDS++LTT DIKWLGVRPSDLD++ IP QCRL MT+ DM+TG+++L+E+FI+K+P W ELELM+K K+KAEIQALS+FGFQY+TE YLP KL++GDWI Sbjct: 28 DEILAKVAKLSEAEKKKPKESVTLQDLNLPNVSKEVVDLGAPQVISEIEKTMLSVAASILNGHGFGYTIPTRTSANQLYVPQLDRIVLKDKSSFRQYGNMSTVRKTAITTRILQLIHQLCNKGIHVTKRDLFYTDVKLFQEQGQSDTILDDVSCMLGCTRSSLNVVGSEKGVVVGRLIFVEDGDVIDCTKMGVGGKAIPPNIDKVTGFQSDAKFILLVEKDAAFMRLAEDRFYNRFPCVIITAKGQPDVATRLFLKKMKSELKIPVLGLVDSDPYGLKILSVYMSGSKNMSYDSSNLTTPDIKWLGVRPSDLDRFKIPEQCRLPMTDADMKTGKEMLEEDFIKKDPRWHAELELMVKKKEKAEIQALSSFGFQYLTEVYLPMKLQEGDWI 417
BLAST of NO10G02420 vs. NCBI_GenBank
Match: XP_002177352.1 (type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum CCAP 1055/1] >EEC51815.1 type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 537.0 bits (1382), Expect = 7.500e-149 Identity = 257/356 (72.19%), Postives = 313/356 (87.92%), Query Frame = 0 Query: 231 EVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 EV ++ VL +E L +A +L +GFS ++P+R+A+NQ+Y+ E DRIVL K ++R+FLN +E RK+AIT R++QL+H VL K IHITKRD+FYTDVKLF DQ ESD VLDDVA M+GCTRS L+VVAS+KGLVVGR+QFEEDGD+IDCT+MGVGGKAIPPYIDKI I SDA+FILLVEKEAAYMR+AEDRFY++YPCI+ITAKGQPDVATR+FL ++ EL IPVLGLVDSDPYGLKILSVYM+GSKNMSYDSASLTT DIKWLG+RPSDLDKY++P QCRLDMTE+D++TG+++++E+FIQKNPEW+KELE+M+K KKKAEIQALS+FGFQY+TE YLPRKL++GDWI Sbjct: 75 EVVELPATQVLEGMEAMALHIAQQVLERKGFSLEIPSRAASNQIYVKEWDRIVLGGKRSSRSFLNVKESRKSAITLRVMQLLHAVLMKRIHITKRDLFYTDVKLFVDQAESDGVLDDVATMIGCTRSNLHVVASDKGLVVGRIQFEEDGDFIDCTKMGVGGKAIPPYIDKIENIASDAEFILLVEKEAAYMRMAEDRFYHRYPCIIITAKGQPDVATRMFLARITSELKIPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDLDKYDLPEQCRLDMTENDIKTGKEMMKEDFIQKNPEWMKELEIMVKTKKKAEIQALSSFGFQYVTEQYLPRKLKEGDWI 430
BLAST of NO10G02420 vs. NCBI_GenBank
Match: XP_009776251.1 (PREDICTED: DNA topoisomerase 6 subunit A [Nicotiana sylvestris] >XP_016463309.1 PREDICTED: DNA topoisomerase 6 subunit A-like [Nicotiana tabacum]) HSP 1 Score: 535.8 bits (1379), Expect = 1.700e-148 Identity = 257/388 (66.24%), Postives = 324/388 (83.51%), Query Frame = 0 Query: 200 VLEEVRLLMLRSRRYDAPNPSLAELGI-TTVREVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 +L+ ++ L S + P+LA++G+ TT REV+D+ + V + I +L +A IL GEGFS+ VP+RS+ NQLY+ ELDRI+L DK + R F N VRKT ITTRILQL+H++ +K IH+TKRD+FYTDVKLF+DQ +SD VLDDV+C+LGCTRS LNVVA+EKG+VVGR+ F +DGD IDCT+MG+GGKAIPP ID++ +QSDA FILLVEK+AAYMRLAEDRFYN++PCI++TAKGQPDVATRLFL+K+KMEL++PVL LVDSDPYGLKILSVY GSKNMSYDSA+LTT DIKWLG+RPSDLDKY IP QCRL MTE D++TG+ LL+E+F++KNP WV+EL LM+K K+KAEIQALS+FGFQY++E YLP KL++ DW+ Sbjct: 33 ILQTLKNLKASSAASSSKTPTLADVGLSTTCREVTDLPIDEVQYNIGSVMLNLARSILAGEGFSFNVPSRSSANQLYVPELDRIILKDKSSIRAFSNVSTVRKTTITTRILQLIHQLCTKNIHVTKRDLFYTDVKLFQDQTQSDTVLDDVSCILGCTRSSLNVVAAEKGVVVGRLIFSDDGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELNLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPAWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQEQDWL 420
BLAST of NO10G02420 vs. NCBI_GenBank
Match: PTQ31190.1 (hypothetical protein MARPO_0114s0011 [Marchantia polymorpha] >PTQ31191.1 hypothetical protein MARPO_0114s0011 [Marchantia polymorpha]) HSP 1 Score: 535.4 bits (1378), Expect = 2.200e-148 Identity = 262/388 (67.53%), Postives = 319/388 (82.22%), Query Frame = 0 Query: 200 VLEEVRLLMLRSRRYDAPNPSLAELGIT-TVREVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 +L +R S++ +LAEL ++ +EV D++ VL EIE+T+L +A IL G+GF Y +P RS+ NQLY+ ELDRIVL DK R F N VRKTAITTRILQLVH++ K IH+TKRD+FYTDVKLF +Q +SD VLDDV+CMLGCTRS LNVVASEKG+VVGR+ F EDGD IDCT+MGVGGKAIPP IDK+ SDA FILLVEK+AA+MRLAEDRFYN++PC++ITAKGQPDVATRLFLKK+K +L IPVLGLVDSDPYGLKILSVY++GSKNMSYDS++LTT DIKWLGVRP+DLDKY IP QCRL MTE D++TG+ LL+E+FI+K+P W+KELELM+K K+KAEIQALS+FGFQY++E YLP K+++ DWI Sbjct: 52 ILASIREFSEASKKATVETRTLAELNLSHACKEVVDLSTTDVLSEIEKTILHIAQSILNGKGFGYNIPARSSANQLYVPELDRIVLKDKATFRPFANMSSVRKTAITTRILQLVHQLCQKRIHVTKRDLFYTDVKLFVEQTQSDSVLDDVSCMLGCTRSSLNVVASEKGVVVGRLIFVEDGDTIDCTKMGVGGKAIPPNIDKVKDFVSDALFILLVEKDAAFMRLAEDRFYNRFPCVIITAKGQPDVATRLFLKKMKTDLKIPVLGLVDSDPYGLKILSVYLSGSKNMSYDSSNLTTPDIKWLGVRPTDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFIKKDPNWIKELELMVKTKEKAEIQALSSFGFQYLSEVYLPLKIQQRDWI 439
BLAST of NO10G02420 vs. NCBI_GenBank
Match: XP_019239263.1 (PREDICTED: DNA topoisomerase 6 subunit A [Nicotiana attenuata] >OIT21152.1 dna topoisomerase 6 subunit a [Nicotiana attenuata]) HSP 1 Score: 533.9 bits (1374), Expect = 6.400e-148 Identity = 256/388 (65.98%), Postives = 324/388 (83.51%), Query Frame = 0 Query: 200 VLEEVRLLMLRSRRYDAPNPSLAELGI-TTVREVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 +L+ ++ L + S + +LA++G+ TT REV+D+ + V + I +L +A IL GEGFS+ VP+RS+ NQLY+ ELDRI+L DK + R F N VRKT ITTRILQL+H++ +K IH+TKRD+FYTDVKLF+DQ +SD VLDDV+C+LGCTRS LNVVA+EKG+VVGR+ F +DGD IDCT+MG+GGKAIPP ID++ +QSDA FILLVEK+AAYMRLAEDRFYN++PCI++TAKGQPDVATRLFL+K+KMEL++PVL LVDSDPYGLKILSVY GSKNMSYDSA+LTT DIKWLG+RPSDLDKY IP QCRL MTE D++TG+ LL+E+F++KNP WV+EL LM+K K+KAEIQALS+FGFQY++E YLP KL++ DW+ Sbjct: 33 ILQTLKTLKVSSAASSSKTLTLADVGLSTTCREVTDLPIDEVQYNIGSVMLNLARSILAGEGFSFNVPSRSSANQLYVPELDRIILKDKSSVRAFSNVSTVRKTTITTRILQLIHQLCTKNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVSCILGCTRSSLNVVAAEKGVVVGRLIFSDDGDIIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELNLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPAWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQEQDWL 420
BLAST of NO10G02420 vs. NCBI_GenBank
Match: XP_005710213.1 (unnamed protein product [Chondrus crispus] >CDF39919.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 532.7 bits (1371), Expect = 1.400e-147 Identity = 264/376 (70.21%), Postives = 317/376 (84.31%), Query Frame = 0 Query: 215 DAPNPS---LAELGITTV-REVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 DAP P+ L+EL + V +EV ++ V IE + VA I+RGEGF Y VPTRSA+NQ+Y+ ELDRIVL DK ++R F N VRK I TRI+ LV E+ +KGIH+TKRD+FYTDVKLFK Q ESD VL+DVACM+GCTR+ L+VVASEKG+V+GRV+F E GD IDCTRMGVGGKAIPPY+++I I+SDA+FILLVEK+AA+MRLAEDRFY+KY CI+ITAKGQPDVATRLFLKKL+ L IP++GLVDSDPYGLKILSVYM+GSKNMSYDSA+LTT DIKWLGVRPSDL+KY IP +CRL MTEHD++TG++LLQE+FI+KNP W KELELM+K K+KAEIQALS+FGFQY+TE+YLPRKL +GDWI Sbjct: 18 DAPGPARRKLSELDLGDVFKEVLELDTGRVRRGIESILAVVARSIMRGEGFRYVVPTRSASNQMYVEELDRIVLKDKTSSRAFANTGTVRKVTIMTRIMGLVWELCNKGIHVTKRDLFYTDVKLFKTQNESDEVLNDVACMVGCTRTSLSVVASEKGIVIGRVRFREAGDLIDCTRMGVGGKAIPPYVERITDIESDAEFILLVEKDAAFMRLAEDRFYSKYACIIITAKGQPDVATRLFLKKLRETLGIPIMGLVDSDPYGLKILSVYMSGSKNMSYDSANLTTPDIKWLGVRPSDLEKYGIPERCRLPMTEHDIKTGKELLQEDFIKKNPAWYKELELMVKNKEKAEIQALSSFGFQYLTEEYLPRKLAQGDWI 393
BLAST of NO10G02420 vs. NCBI_GenBank
Match: OEU16530.1 (DNA topoisomerase IV, alpha subunit [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 532.7 bits (1371), Expect = 1.400e-147 Identity = 257/356 (72.19%), Postives = 311/356 (87.36%), Query Frame = 0 Query: 231 EVSDMAPEGVLWEIEQTVLQVAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRTFLNPREVRKTAITTRILQLVHEVLSKGIHITKRDMFYTDVKLFKDQKESDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDYIDCTRMGVGGKAIPPYIDKIAKIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKMELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYNIPAQCRLDMTEHDMRTGRQLLQEEFIQKNPEWVKELELMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 587 EV +++ VL IE LQ+ +L+ +GFS ++P+R+++NQ+Y+ + DR+VL K R+FLN RE RK+AIT R++QL+H VL K IHITKRD+FYTDVKLF DQ ESD VLDDVA M+GCTRS L+VVAS+KGLVVGR+QFEEDGD+IDCT+MGVGGKAIPPYIDKI I+SDA+FILLVEKEAAYMR+AEDRFYNKYPCIVITAKGQPDVA+R+FL ++ EL IPVLGLVDSDPYGLKILSVYM+GSKNMSYDSASLTT +I WLG+RP+DLDKY++P QCRLDMTE+D++TG++LL EEFIQKNP+W+KE+E M+K KKKAEIQALS+FGFQYITE+YLPRKL +GDWI Sbjct: 88 EVDELSTTEVLEGIEGVALQITRQVLQKKGFSMEIPSRASSNQIYLKDRDRLVLGGKRVGRSFLNVRESRKSAITLRVMQLLHAVLVKRIHITKRDLFYTDVKLFVDQAESDGVLDDVATMIGCTRSNLHVVASDKGLVVGRIQFEEDGDFIDCTKMGVGGKAIPPYIDKIENIRSDAEFILLVEKEAAYMRMAEDRFYNKYPCIVITAKGQPDVASRMFLSRITNELQIPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPNIMWLGLRPTDLDKYDLPDQCRLDMTENDIKTGKELLNEEFIQKNPKWMKEIENMIKTKKKAEIQALSSFGFQYITEEYLPRKLREGDWI 443 The following BLAST results are available for this feature:
BLAST of NO10G02420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G02420 ID=NO10G02420|Name=NO10G02420|organism=Nannochloropsis oceanica|type=gene|length=2149bpback to top protein sequence of NO10G02420.1 >NO10G02420.1-protein ID=NO10G02420.1-protein|Name=NO10G02420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=587bpback to top Synonyms
Publications
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