TOP6A, gene5044 (gene) Nannochloropsis gaditana

Overview
NameTOP6A
Unique Namegene5044
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:468627..470721 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100005g11
Gene biotypeprotein_coding
GeneTOP6A
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:468627..470721 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0009056catabolic process
GO:0006259DNA metabolic process
GO:0006950response to stress
GO:0016043cellular component organization
GO:0000003reproduction
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000166nucleotide binding
GO:0004518nuclease activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02420NO10G02420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5224rna5224-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5224rna5224Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5224

>rna5224-protein ID=rna5224-protein|Name=rna5224|organism=Nannochloropsis gaditana|type=polypeptide|length=573bp
MVRRRSVKDDTSSEEEEEEEVSSSDEEDEDSDFSPWEATTRKGKKITKAA
PEQSIARSHTAATLTSSASKKKSPSQPRSLGKKEGKRGGGHGTVPRKAAA
ARTGTTSPGTLAGRKRRKLEREEDDEEEGKEEDEAKEVYDEDEEEDDDDE
PEGKSRGGSTRRMTGKNQRKTKGLNVTGVGNSKVDKVLEEVRQLMLRSRR
DDAPNPTLADLGITTVREVSDMAPEGVLFEIEKTILAAAGMILRGEGFSY
QVPTRSATNQLYIAELDRIVLSDKVATRAFLNPREVRKTAITTRIMQLVH
EVLSKGIHITKRDMFYTDVKLFRDQKDSDVVLDDVACMLGCTRSCLNVVA
SEKGLVVGRVQFEEDGDFIDCTRMGVGGKAIPPYVDKIACIQSDAKFILL
VEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKTELHIPVL
GLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYGI
PPQCRLDMTDHDMRTGRQLLQEDFIQKNPEWVKELQLMLKMKKKAEIQAL
SAFGFQYITEDYLPRKLEKGDWI
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Synonyms
Publications