NO10G00570, NO10G00570 (gene) Nannochloropsis oceanica

Overview
NameNO10G00570
Unique NameNO10G00570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1520
Alignment locationchr10:188640..190159 -

Link to JBrowse

Properties
Property NameValue
DescriptionAlpha beta hydrolase fold-3 domain protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:188640..190159 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR013094AB_hydrolase_3
Homology
BLAST of NO10G00570 vs. NCBI_GenBank
Match: EWM21486.1 (alpha beta hydrolase fold-3 domain protein [Nannochloropsis gaditana])

HSP 1 Score: 202.6 bits (514), Expect = 2.400e-48
Identity = 128/376 (34.04%), Postives = 197/376 (52.39%), Query Frame = 0
Query:   50 IKLTEGSKRYTA-LWP--KPPVGDVDLAATRATVEYMSRLVGGRVLPMRRVEDIPLTSLDGSSPFFVRNYFPTLLEEDKVGEQKLGVILYSHGGGGMVGSVASYDSMCRRIAATCHMAVVSVDYRLTPEHPYPAALEDMEAAFQFVVNDLVMRQYPEVLDPGKVVLMGDSFGGHLAASLLLRLHRKEEYKQSIKP----KACVLIYPSVDMKNARHPSFSTHANVSHLTPEMINMFFNAYLPDKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNTEGLFQEELRLDPDVSVLYSTHLHLFPPTLVLSAACDPLIDEGILFVKRLREEKVDVRHVIYPEIIHGFFSGYDMFPEAEMALGETANFLKEGL 419
            + LT  S+ + A ++P   PP  D+ L   RA +E  +R +GG  L +RRVED+ + SLDG++   VR Y P +       +  L V+LY+HGGG + G++ ++D +CRRIA      VV+VDYRL+PEH +PAAL+D+EAA+ +VV  +         D  ++ L GDS GG+L ++L +RL  K E    ++P    +  VLIYP VD++  R  S+ T+     L+   I+ +  +YL                                      ++  +   +  +   P+VS +   H    PPTL+L+AACDPL  E  L  +RL    V VR +IYP+ +H + + +D+FPE+E +L E   FL E +
Sbjct:    5 MSLTPASQAFLAQIYPPNAPPARDMPLDVGRAKMEAAARALGGPYLSVRRVEDLSIPSLDGNASVKVRVYSPKI-------DATLPVLLYAHGGGFVKGNLETHDQLCRRIAVGSDHVVVAVDYRLSPEHRFPAALDDVEAAYTWVVGQVAW-------DATRISLAGDSAGGNLMSALAVRLAGKPE--SQVRPEHRIRRQVLIYPVVDVRR-RGESYETYGTGYGLSATAIDYYLESYL----------------------------------GPAYTDAKDEDARRAVLEKPEVSTILYQHPEKLPPTLILTAACDPLASEAGLLKERLEAAGVPVRQIIYPDTVHAYMTFFDIFPESEQSLEEIVRFLNEDI 329          
BLAST of NO10G00570 vs. NCBI_GenBank
Match: WP_088179150.1 (alpha/beta hydrolase [Thauera phenolivorans])

HSP 1 Score: 156.8 bits (395), Expect = 1.500e-34
Identity = 109/353 (30.88%), Postives = 163/353 (46.18%), Query Frame = 0
Query:   66 PPVGDVDLAATRATVEYMSRLVGGRVLPMRRVEDIPLTSLDGSSPFFVRNYFPTLLEEDKVGEQKLGVILYSHGGGGMVGSVASYDSMCRRIAATCHMAVVSVDYRLTPEHPYPAALEDMEAAFQFVVNDLVMRQYPEVLDPGKVVLMGDSFGGHLAASLLLRLHRKEEYKQSIKPKACVLIYPSVDMKNARHPSFSTHANVSHLTPEMINMFFNAYLPDKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNTEGLFQEELRLDPDVSVLYSTHLHLFPPTLVLSAACDPLIDEGILFVKRLREEKVDVRHVIYPEIIHGFFSGYDMFPEAEMALGETANFLKEGL 419
            P   ++ LA  R + E +    GG    +  V ++P+    G      R Y P     D   +  L +++Y HGGG  VG VASYD +CRR+A   H AV+SVDYRL PEHP+PAA++D   AF++ +++  +      +DP ++ L GDS GG+LA    L L          +P+  +L+YPS ++ + R PS     +   L  E +  FF  YLP                                     +  TE         D   S + +  L   PP L++SA  DPL+D+   F +R+REE  +V +   P +IHGF +   +FPE+   +   A  L+E L
Sbjct:   20 PRFHEIPLAQARHSFEKLQFAFGGEKPAVAAVTEVPMAR--GGGALLARLYRPF----DTHADVALPLLIYFHGGGWCVGDVASYDGLCRRLANASHCAVLSVDYRLAPEHPFPAAVQDARFAFEWTLDNAELLG----IDPARIALGGDSAGGNLAIVSALALRD----AGGAQPRFLLLVYPSTEILSER-PSRRRFDDGYFLDRETLQWFFERYLP-------------------------------------AGETE---------DWRASPMRAASLAGLPPMLLVSAEFDPLVDDCAAFAQRVREEGGEVEYREVPGVIHGFLTLAKVFPESAQTVALAAYALRERL 311          
BLAST of NO10G00570 vs. NCBI_GenBank
Match: WP_012585537.1 (MULTISPECIES: alpha/beta hydrolase [Thauera] >ACR01114.1 Alpha/beta hydrolase fold-3 domain protein [Thauera sp. MZ1T] >KIN88930.1 alpha/beta hydrolase fold family protein [Thauera sp. SWB20])

HSP 1 Score: 152.9 bits (385), Expect = 2.200e-33
Identity = 96/291 (32.99%), Postives = 145/291 (49.83%), Query Frame = 0
Query:  128 EQKLGVILYSHGGGGMVGSVASYDSMCRRIAATCHMAVVSVDYRLTPEHPYPAALEDMEAAFQFVVNDLVMRQYPEVLDPGKVVLMGDSFGGHLAASLLLRLHRKEEYKQSIKPKACVLIYPSVDMKNARHPSFSTHANVSHLTPEMINMFFNAYLPDKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNTEGLFQEELRLDPDVSVLYSTHLHLFPPTLVLSAACDPLIDEGILFVKRLREEKVDVRHVIYPEIIHGFFSGYDMFPEAEMALGETANFLKEGL 419
            + +L +++++HGGG  +G VASYD  CR +A     AV+SV+YRL PEHP+PAA EDM  AF + V++  +      +DP ++ L GDS GG+LA    L L   E     +KP   +LIYPS ++++AR PS   +A    L  E +  FF  YLP                                          G+  E+ R  P    + +  L   PP  V+ A CDPL+D+ + FV+R+R E  +V   ++  ++HGF++   + PEA  A+  +A  L+  L
Sbjct:   77 DDRLPLVIFAHGGGWCIGDVASYDVACRELANGSGCAVLSVEYRLAPEHPFPAAPEDMRLAFDWSVDNADLLG----IDPARIALAGDSAGGNLAIVTALALRAAE-----VKPAFLLLIYPSTEIRSAR-PSRERYAEGFFLDRESLQWFFERYLP------------------------------------------GVDTEDWRASP----MRAASLAGLPPMQVICAECDPLVDDCLAFVERVRSEGGEVALRVFEGVVHGFYTLGKLIPEAREAVALSAAALRSHL 311          
BLAST of NO10G00570 vs. NCBI_GenBank
Match: WP_004323007.1 (alpha/beta hydrolase [Thauera aminoaromatica] >ENO83352.1 alpha/beta hydrolase [Thauera aminoaromatica S2])

HSP 1 Score: 152.5 bits (384), Expect = 2.900e-33
Identity = 96/291 (32.99%), Postives = 146/291 (50.17%), Query Frame = 0
Query:  128 EQKLGVILYSHGGGGMVGSVASYDSMCRRIAATCHMAVVSVDYRLTPEHPYPAALEDMEAAFQFVVNDLVMRQYPEVLDPGKVVLMGDSFGGHLAASLLLRLHRKEEYKQSIKPKACVLIYPSVDMKNARHPSFSTHANVSHLTPEMINMFFNAYLPDKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNTEGLFQEELRLDPDVSVLYSTHLHLFPPTLVLSAACDPLIDEGILFVKRLREEKVDVRHVIYPEIIHGFFSGYDMFPEAEMALGETANFLKEGL 419
            + +L +++++HGGG  +G VASYD  CR +A     AV+SV+YRL PEHP+PAA EDM  AF + V++  +      +DP ++ L GDS GG+LA    L L   E     +KP   +LIYPS ++++AR PS   +A    L  E +  FF  YLP                                          G+  E+ R+ P    + +  L   PP  V+ A CDPL+D+ + FV+R+R E  +V   ++  ++HGF++   + PEA  A+  +A  L+  L
Sbjct:   77 DDRLPLVIFAHGGGWCIGDVASYDVACRELANGSGCAVLSVEYRLAPEHPFPAAPEDMRLAFDWSVDNADLLG----IDPVRIALAGDSAGGNLAIVTALALRAAE-----VKPAFLLLIYPSTEIRSAR-PSRERYAEGFFLDRESLQWFFERYLP------------------------------------------GVDTEDWRVSP----MRAASLAGLPPMQVICAECDPLVDDCLAFVERVRSEGGEVALRVFEGVVHGFYTLGKLIPEAREAVALSAAALRSHL 311          
BLAST of NO10G00570 vs. NCBI_GenBank
Match: WP_004372485.1 (alpha/beta hydrolase [Thauera phenylacetica] >ENO95664.1 alpha/beta hydrolase [Thauera phenylacetica B4P])

HSP 1 Score: 152.5 bits (384), Expect = 2.900e-33
Identity = 93/291 (31.96%), Postives = 147/291 (50.52%), Query Frame = 0
Query:  128 EQKLGVILYSHGGGGMVGSVASYDSMCRRIAATCHMAVVSVDYRLTPEHPYPAALEDMEAAFQFVVNDLVMRQYPEVLDPGKVVLMGDSFGGHLAASLLLRLHRKEEYKQSIKPKACVLIYPSVDMKNARHPSFSTHANVSHLTPEMINMFFNAYLPDKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNTEGLFQEELRLDPDVSVLYSTHLHLFPPTLVLSAACDPLIDEGILFVKRLREEKVDVRHVIYPEIIHGFFSGYDMFPEAEMALGETANFLKEGL 419
            +++L +++++HGGG  +G VASYD  CR +A     AV+SV+YRL PEHP+PAA EDM  AF + V++  +      +DP ++ L GDS GG+LA    L L   E      +P   +LIYPS +++++R P+   +A+   L  E +  FF  YLPD +                                           E+ R+ P    + +  L   PP  V+ A CDPL+D+ + FV+R+R E  +V   ++  ++HGF++   + PEA  A+  +A  L+  L
Sbjct:   77 DERLALVIFAHGGGWCIGDVASYDVACRELANASGCAVLSVEYRLAPEHPFPAAPEDMRLAFDWAVDNADLLG----IDPARIALAGDSAGGNLAIVTALALREAE-----ARPAFLLLIYPSTEIRSSR-PARERYADGFFLDRESLQWFFERYLPDVD------------------------------------------TEDWRVSP----MRAASLAGLPPMQVICAECDPLVDDCVAFVERVRGEGGEVALRVFEGVVHGFYTLGKLIPEAREAVALSAAALRAHL 311          
BLAST of NO10G00570 vs. NCBI_GenBank
Match: WP_002939532.1 (alpha/beta hydrolase [Thauera sp. 27] >ENO80870.1 hypothetical protein B447_10403 [Thauera sp. 27])

HSP 1 Score: 151.0 bits (380), Expect = 8.300e-33
Identity = 103/315 (32.70%), Postives = 146/315 (46.35%), Query Frame = 0
Query:  106 DGSSPFFVRNYFPTLLEEDKVGEQKLGVILYSHGGGGMVGSVASYDSMCRRIAATCHMAVVSVDYRLTPEHPYPAALEDMEAAFQFVVNDLVMRQYPEVLDPGKVVLMGDSFGGHLAASLLLRLHRKEEYKQSIKPKACVLIYPSVDMKNARHPSFSTHANVSHLTPEMINMFFNAYLPDKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNTEGLFQEELRLDPDVSVLYSTHLHLFPPTLVLSAACDPLIDEGILFVKRLREEKVDVRHVIYPEIIHGFFSGYDMFPEAEMALGETANFLKEGLRL 421
            DGS+    R Y P     D    + L +++Y HGGG  VG VASYD +CR +A     AV+SVDYRL PEHP+PAA+ D   AF++ V +  +      +DP ++ L GDS GG+L+    L L       +  +P    L+YPS ++ + R PS   +A    L    +  FF  YLPD                                      NTE         D  VS + +  L   PPTL++ A  DPL+D+ + F +R++ E   V +V  P +IHGF +   +FPE+   L   A  L+  L L
Sbjct:    5 DGSA-LLARLYRPLSSHAD----EPLALLIYFHGGGWCVGDVASYDVLCRELANLARCAVLSVDYRLAPEHPFPAAIRDARLAFEWAVENASLL----AIDPARIALGGDSAGGNLSIVTALALR-----DEPARPSCLALVYPSTEIVSTR-PSRERYAEGFFLDRGTLQWFFERYLPD-------------------------------------GNTE---------DWRVSPMRAERLAGLPPTLLVGAEFDPLVDDCVAFAERMKAEGCTVDYVEMPGVIHGFLTLGKVFPESAQTLVLLARHLQTCLAL 258          
BLAST of NO10G00570 vs. NCBI_GenBank
Match: WP_002929802.1 (alpha/beta hydrolase [Thauera sp. 28] >ENO92245.1 hypothetical protein C662_12872 [Thauera sp. 28])

HSP 1 Score: 151.0 bits (380), Expect = 8.300e-33
Identity = 103/315 (32.70%), Postives = 146/315 (46.35%), Query Frame = 0
Query:  106 DGSSPFFVRNYFPTLLEEDKVGEQKLGVILYSHGGGGMVGSVASYDSMCRRIAATCHMAVVSVDYRLTPEHPYPAALEDMEAAFQFVVNDLVMRQYPEVLDPGKVVLMGDSFGGHLAASLLLRLHRKEEYKQSIKPKACVLIYPSVDMKNARHPSFSTHANVSHLTPEMINMFFNAYLPDKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNTEGLFQEELRLDPDVSVLYSTHLHLFPPTLVLSAACDPLIDEGILFVKRLREEKVDVRHVIYPEIIHGFFSGYDMFPEAEMALGETANFLKEGLRL 421
            DGS+    R Y P     D    + L +++Y HGGG  VG VASYD +CR +A     AV+SVDYRL PEHP+PAA+ D   AF++ V +  +      +DP ++ L GDS GG+L+    L L       +  +P    L+YPS ++ + R PS   +A    L    +  FF  YLPD                                      NTE         D  VS + +  L   PPTL++ A  DPL+D+ + F +R++ E   V +V  P +IHGF +   +FPE+   L   A  L+  L L
Sbjct:    5 DGSA-LLARLYRPLSSHAD----EPLALLIYFHGGGWCVGDVASYDVLCRELANLARCAVLSVDYRLAPEHPFPAAIRDARLAFEWAVENASLL----AIDPARIALGGDSAGGNLSIVTALALR-----DEPARPSCLALVYPSTEIVSTR-PSRERYAEGFFLDRGTLQWFFERYLPD-------------------------------------GNTE---------DWRVSPMRAERLAGLPPTLLVGAEFDPLVDDCVAFAERMKAEGCTVDYVEMPGVIHGFLTLGKVFPESTQTLVLLARHLQTCLAL 258          
BLAST of NO10G00570 vs. NCBI_GenBank
Match: WP_043203745.1 (alpha/beta hydrolase [Paraburkholderia acidipaludis])

HSP 1 Score: 151.0 bits (380), Expect = 8.300e-33
Identity = 106/356 (29.78%), Postives = 160/356 (44.94%), Query Frame = 0
Query:   65 KPPVGDVDLAATRATVEYMSRLVGGRVLPMRRVEDIPLTSLDGSSPFFVRNYFPTLLEEDKVGEQKLGVILYSHGGGGMVGSVASYDSMCRRIAATCHMAVVSVDYRLTPEHPYPAALEDMEAAFQFVVNDLVMRQYPEVLDPGKVVLMGDSFGGHLAASLLLRLHRKEEYKQSIKPKACVLIYPSVDMKNAR--HPSFSTHANVSHLTPEMINMFFNAYLPDKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNTEGLFQEELRLDPDVSVLYSTHLHLFPPTLVLSAACDPLIDEGILFVKRLREEKVDVRHVIYPEIIHGFFSGYDMFPEAEMALGETANFLKEGL 419
            +PP+  + LA  R   + +   +GG  +P+R V ++      G  P  +R Y P     D++G    GVI+Y HGGG  +G + S+D +CRR+A     AVV V YRL PEHP PA  ED+ AA +++ N          LDP ++ + GDS G  +AA    RL      +  +   A VL YPS D+  A    PS   +  +  LT E++++  + +                                          T+G    + RL P    L    LH  PP L+++A CD L D+G L+ + LR   V V ++  P ++HGF     + P A  A+ E   +L + L
Sbjct:   27 EPPLESLPLAQRRLAYKQIGARLGGESMPLREVRELQAQGPAGPIP--LRLYLP-----DQIGAGPHGVIVYLHGGGWTLGDLDSHDKICRRLARAAGCAVVGVGYRLAPEHPAPAGPEDVLAAIRWLAN----HAQALGLDPARIAVAGDSAGASMAAVATRRL------RGEVPLCAQVLFYPSTDLSPAAADFPSRYENGAIPPLTLELMHVLSSPF------------------------------------------TDGFDTHDTRLSP----LREPDLHDLPPALIITAECDVLRDDGRLYCEALRAAGVQVNYIEVPGMVHGFVEMAGVLPAAVEAIEEAGAYLNQVL 319          
BLAST of NO10G00570 vs. NCBI_GenBank
Match: WP_062766850.1 (alpha/beta hydrolase [Tistrella mobilis] >KYO51118.1 hypothetical protein AUP44_10070 [Tistrella mobilis])

HSP 1 Score: 147.5 bits (371), Expect = 9.200e-32
Identity = 103/323 (31.89%), Postives = 147/323 (45.51%), Query Frame = 0
Query:   97 VEDIPLTSLDGSSPFFVRNYFPTLLEEDKVGEQKLGVILYSHGGGGMVGSVASYDSMCRRIAATCHMAVVSVDYRLTPEHPYPAALEDMEAAFQFVVNDLVMRQYPEVLDPGKVVLMGDSFGGHLAASLLLRLHRKEEYKQSIKPKACVLIYPSVDMKNARHPSFSTHANVSHLTPEMINMFFNAYLPDKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNTEGLFQEELRLDPDVSVLYSTHLHLFPPTLVLSAACDPLIDEGILFVKRLREEKVDVRHVIYPEIIHGFFSGYDMFPEAEMALGETANFLKEGLR 420
            VED  L   DG+    VR Y P  L+ D      L  +LY HGGG  +GS+ +YD +CR IAA   +AVVS+DYRL PEHP+PAA++D  AA+  +            +DP ++ + GDS GG+L+A + L       +     P+   L+YP+ D+ + RHPS    A    L    I  F + YLPD+                                                +D   S L +T     PP L+++A CDPL DEG  + + L    V V H +YP ++HGF +      +A  A+  + + LK  LR
Sbjct:   57 VEDHTLPGPDGTD-LPVRLYRPAALDPD---APPLPALLYIHGGGWTIGSLNAYDRLCRHIAAAAGIAVVSLDYRLAPEHPFPAAVDDAIAAWAALPGAAARFG----IDPERLAIGGDSAGGNLSAVVALAARDDGMH----LPRLQWLVYPATDLAH-RHPSRDDFAEGYLLDDATITWFLDQYLPDRT---------------------------------------------AAVDWRASPLRATDHRGLPPALIVTAGCDPLADEGQAYAEALSRAGVAVEHRVYPGMLHGFINTAGALDQARDAVARSIDALKAALR 321          
BLAST of NO10G00570 vs. NCBI_GenBank
Match: WP_085881477.1 (alpha/beta hydrolase [Oceanibacterium hippocampi] >SLN11737.1 Carboxylesterase NlhH [Oceanibacterium hippocampi])

HSP 1 Score: 147.5 bits (371), Expect = 9.200e-32
Identity = 106/356 (29.78%), Postives = 162/356 (45.51%), Query Frame = 0
Query:   64 PKPPVGDVDLAATRATVEYMSRLVGGRVLPMRRVEDIPLTSLDGSSPFFVRNYFPTLLEEDKVGEQKLGVILYSHGGGGMVGSVASYDSMCRRIAATCHMAVVSVDYRLTPEHPYPAALEDMEAAFQFVVNDLVMRQYPEVLDPGKVVLMGDSFGGHLAASLLLRLHRKEEYKQSIKPKACVLIYPSVDMKNARHPSFSTHANVSHLTPEMINMFFNAYLPDKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNTEGLFQEELRLDPDVSVLYSTHLHLFPPTLVLSAACDPLIDEGILFVKRLREEKVDVRHVIYPEIIHGFFSGYDMFPEAEMALGETANFLKEGLR 420
            P+P +  +D  A RA  +   +++     P+  V DI +   DG  P   R Y P     +  GE +L +++Y HGGG ++G++ S+DS+CR +A    +AV+SVDYRL PEH +PAA++D  AAF++             +DPG++ + GDS GG+LAA   LR        ++ +P   +L+YP+ D+   +  S    A+   LT  +++ F   YL D++                                                 PD S + +      PP  VL+A  DPL  EG  + + L    + VRH  +P  IHGF +     PE   AL E A  +  GLR
Sbjct:   18 PRPSLDRLDPVAARAQYDRTVKVLDLDPRPVASVRDIAIDGADG--PLKARLYHP-----ENAGE-RLPLLVYFHGGGWVIGTIESHDSLCRELAIRGDIAVLSVDYRLAPEHRFPAAVDDAHAAFRWAARHAATLG----IDPGRIAVGGDSAGGNLAAVTALRTR-----NEAHRPAFQLLLYPATDLA-TQSESHRRLADGYLLTAALMDYFSGHYLGDRSAAD---------------------------------------------HPDASPILAADFSGLPPAWVLTAGYDPLHHEGEAYAEALSGAGIPVRHRHFPGQIHGFLNMGKAIPETLAALDEGAKAVGGGLR 310          
The following BLAST results are available for this feature:
BLAST of NO10G00570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21486.12.400e-4834.04alpha beta hydrolase fold-3 domain protein [Nannoc... [more]
WP_088179150.11.500e-3430.88alpha/beta hydrolase [Thauera phenolivorans][more]
WP_012585537.12.200e-3332.99MULTISPECIES: alpha/beta hydrolase [Thauera] >ACR0... [more]
WP_004323007.12.900e-3332.99alpha/beta hydrolase [Thauera aminoaromatica] >ENO... [more]
WP_004372485.12.900e-3331.96alpha/beta hydrolase [Thauera phenylacetica] >ENO9... [more]
WP_002939532.18.300e-3332.70alpha/beta hydrolase [Thauera sp. 27] >ENO80870.1 ... [more]
WP_002929802.18.300e-3332.70alpha/beta hydrolase [Thauera sp. 28] >ENO92245.1 ... [more]
WP_043203745.18.300e-3329.78alpha/beta hydrolase [Paraburkholderia acidipaludi... [more]
WP_062766850.19.200e-3231.89alpha/beta hydrolase [Tistrella mobilis] >KYO51118... [more]
WP_085881477.19.200e-3229.78alpha/beta hydrolase [Oceanibacterium hippocampi] ... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00570.1NO10G00570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|638690gene_4162Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00570.1NO10G00570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00570 ID=NO10G00570|Name=NO10G00570|organism=Nannochloropsis oceanica|type=gene|length=1520bp
CGCAGTCTCGAGCATCCGAGCACAGCAACATTCTTTCTCGCCGGTTGTTT
CTCGCTCATATTTCGGCAAATTGAGCCCGTTGTGCTTGTGTCACCCGGAG
TAAGCTGTCAATTTGTCTCCGCGCATGTGCACAGCCAATGGACCGAGCCC
TTGCGTTTCCGCCGGGAAAATAAGAAGAAAACATGCAAGCCTTTTTAATG
AGCGCCTCCCTCCTCTCCTCTTTTCCACTATACCACAGCCCACAAGCATG
GCGTCCCATACATCAAATACGATCAAACTCACTGAGGGTAGCAAGCGGTA
CACTGCGCTGTGGCCCAAGCCGCCTGTGGGCGACGTAGACCTTGCTGCCA
CACGCGCGACAGTGGAGTACATGTCCCGTCTCGTCGGCGGCCGTGTCTTG
CCCATGCGTCGTGTGGAAGACATTCCGCTCACCTCTCTCGATGGATCTAG
CCCTTTTTTTGTCCGCAACTACTTCCCCACTCTTCTTGAAGAAGATAAGG
TGGGCGAGCAGAAGTTGGGCGTCATTCTGTATTCCCACGGGGGCGGAGGA
ATGGTGGGCAGCGTGGCCTCCTACGACTCCATGTGCCGACGGATCGCCGC
CACCTGTCACATGGCCGTCGTCTCGGTGGACTACCGCCTGACACCCGAGC
ACCCTTACCCCGCCGCCTTAGAAGACATGGAAGCTGCCTTTCAATTCGTC
GTCAATGATTTGGTCATGAGGCAGTACCCCGAGGTACTGGACCCGGGGAA
GGTGGTGCTGATGGGGGACTCCTTCGGAGGGCACCTGGCCGCCTCGCTGC
TGCTCCGCCTGCACAGAAAGGAAGAGTACAAGCAGAGCATCAAGCCGAAA
GCTTGTGTCTTAATCTATCCGAGCGTGGATATGAAAAATGCGCGACATCC
GTCCTTCTCGACCCATGCGAACGTTAGCCACTTAACGCCGGAAATGATTA
ATATGTTCTTCAATGCCTACCTGCCTGATAAAAATGGGAATGGTACTAGT
AGTAGTAGTAGTAGTAGTAGTAGTAGAAGTGATCATTATAGCGGTAGTAG
TAGTAGCAGCAGCAGCAGCTGTAATGGCAATGGCTGCAGCAATAATACGG
AAGGCCTCTTCCAAGAAGAGCTCCGACTAGATCCTGATGTATCAGTGCTC
TATTCCACCCATTTACACCTCTTTCCCCCTACCCTCGTCCTCAGCGCGGC
CTGTGACCCTTTGATAGACGAAGGCATCTTGTTCGTCAAGCGATTGAGAG
AGGAGAAAGTGGATGTCCGGCATGTGATATATCCCGAGATAATTCACGGC
TTCTTTTCAGGCTATGATATGTTCCCGGAGGCGGAAATGGCATTGGGAGA
GACTGCAAATTTCTTGAAGGAGGGCTTGAGATTGTGAATATGATGGGGGC
AAGGAGGAAGGTGGGATGAATAGTCGCTGTGGATATAACGACATGACGAT
TTGAATGAATAAAGAGTATGTTGAAGTTTCAAGGGCAGGAAAGGAAAAGA
AATCGTTCAACATTCCAACC
back to top

protein sequence of NO10G00570.1

>NO10G00570.1-protein ID=NO10G00570.1-protein|Name=NO10G00570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=421bp
MCTANGPSPCVSAGKIRRKHASLFNERLPPLLFSTIPQPTSMASHTSNTI
KLTEGSKRYTALWPKPPVGDVDLAATRATVEYMSRLVGGRVLPMRRVEDI
PLTSLDGSSPFFVRNYFPTLLEEDKVGEQKLGVILYSHGGGGMVGSVASY
DSMCRRIAATCHMAVVSVDYRLTPEHPYPAALEDMEAAFQFVVNDLVMRQ
YPEVLDPGKVVLMGDSFGGHLAASLLLRLHRKEEYKQSIKPKACVLIYPS
VDMKNARHPSFSTHANVSHLTPEMINMFFNAYLPDKNGNGTSSSSSSSSS
RSDHYSGSSSSSSSSCNGNGCSNNTEGLFQEELRLDPDVSVLYSTHLHLF
PPTLVLSAACDPLIDEGILFVKRLREEKVDVRHVIYPEIIHGFFSGYDMF
PEAEMALGETANFLKEGLRL*
back to top
Synonyms
Publications