jgi.p|Nanoce1779_2|638690, gene_4162 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|638690
Unique Namegene_4162
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:997933..999069 +

Link to JBrowse

Properties
Property NameValue
TranscriptId638776
ProteinId638690
Product nameAlpha/Beta hydrolase fold
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:997933..999069 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004620phospholipase activity
GO:0016298lipase activity
GO:00187311-oxa-2-oxocycloheptane lactonase activity
GO:0018732sulfolactone hydrolase activity
GO:00187333,4-dihydrocoumarin hydrolase activity
GO:0018734butyrolactone hydrolase activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G00570NO10G00570Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|638690mRNA_4162-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|638690mRNA_4162Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|638690

>mRNA_4162-protein ID=mRNA_4162-protein|Name=jgi.p|Nanoce1779_2|638690|organism=Nannochloropsis oceanica|type=polypeptide|length=379bp
MASHTSNTIKLTEGSKRYTALWPKPPVGDVDLAATRATVEYMSRLVGGRV
LPMRRVEDIPLTSLDGSSPFFVRNYFPTLLEEDKVGEQKLGVILYSHGGG
GMVGSVASYDSMCRRIAATCHMAVVSVDYRLTPEHPYPAALEDMEAAFQL
VVNDLVMRQYPEVLDPGKVVLMGDSFGGHLAASLLLRLHRKEEYKQSIKP
KACVLIYPSVDMKNARHPSFSTHANVSHLTPEMINMFFNAYLPDKNGNGT
SSSSSSSSRSDHYSGSSSSSSSSCNGNGCSNNTEGLFQEELRLDPDVSVL
YSTHLHLFPPTLVLSAACDPLIDEGILFVKRLREEKVDVRHVIYPEIIHG
FFSGYDMFPEAEMALGETANFLKEGLRL*
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Synonyms
Publications