NO10G00100, NO10G00100 (gene) Nannochloropsis oceanica

Overview
NameNO10G00100
Unique NameNO10G00100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2729
Alignment locationchr10:29963..32691 +

Link to JBrowse

Properties
Property NameValue
DescriptionTransmembrane transporter protein, chloroquine resistant
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:29963..32691 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013936CRT-like
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO10G00100 vs. NCBI_GenBank
Match: EWM25227.1 (Transmembrane transporter protein, chloroquine resistant [Nannochloropsis gaditana])

HSP 1 Score: 539.3 bits (1388), Expect = 1.200e-149
Identity = 286/448 (63.84%), Postives = 335/448 (74.78%), Query Frame = 0
Query:   26 ASPRTKYGTLPCTPPSTATVAAHPASTLDSATVLSLALIVVLAVGSCNSLTYKIMYEAYGPKGAFFVSTGVNVLYVIYGGLLLYPRMYFSDSVTPAMQALPKHRFLIMGFLDSCGTFLAAMGAVYTPGSVQTLLNQTLIPITMLVSFLYLKTRFTLIQLGGAAFVLAGAGITVLPTFWEGHKGGGEGIGGRPAPSRWYANLIFFLSNVPVACSQVYKEKAFKRDRVDVLYLTQWVSVFQLLFGLGLAPLQALPGIGSAHGVPISSIPSSFRRSWQCFLQTPTSGCADQHPSPSLLLLGFCGVNLTFNTAGLFVSKHGSAILNVITYAVLLPITTLLFSLHPLMGAYTEPLRATTVVGLLVVVLGFYLYQEPVLDLEKRSMAEGRE--EVTAEEEEEGMKEGEW----------------------DMRVRVPSFQERVVAGLGPAVFQ 450
            A+  ++YG+       T   AA         ++LSLAL+VVL +GSCN+L YKIMY+ YG  GAFFVSTGVNVLY+IYGGLLLYPRM F+DS+TPAM+ALPK RF+IMGFLD CGTFLAAMGAVYTPGSVQTLLNQTLIP TM+VS  +L+T F+ +QL GAA VL GA +TVLP F         G G  P+ SRWYANL+FF SN+PVACSQVYKE+AFKRD VDVLYLTQWVSVFQ  FGL LAPLQALPGIGSAHGVP+SSIP++F  SW CFL+ PTS C  Q P+PSLLLL FC VNL FNT GL+VSKHGSA+LNVITYAVLLP+TTL+FSL PLMGA+TEPL A+TV+GLL+V+LGFYLYQEP+L L +R   +G +  +   +   EG+KE                          M + VPSFQERVVAGLGPA++Q
Sbjct:   12 ATAMSEYGSF---AKKTRVGAATGGPVAKCPSILSLALLVVLTLGSCNALVYKIMYQVYGSDGAFFVSTGVNVLYIIYGGLLLYPRMLFTDSITPAMKALPKRRFIIMGFLDCCGTFLAAMGAVYTPGSVQTLLNQTLIPTTMIVSACFLRTHFSNVQLAGAALVLMGAAVTVLPAFITAESDSNNGHGASPSQSRWYANLVFFASNLPVACSQVYKERAFKRDSVDVLYLTQWVSVFQFFFGLALAPLQALPGIGSAHGVPLSSIPTAFLESWDCFLEKPTSVCHGQWPAPSLLLLAFCAVNLVFNTGGLYVSKHGSAVLNVITYAVLLPVTTLIFSLRPLMGAFTEPLSASTVLGLLLVLLGFYLYQEPMLWLGRRDHGKGVDGGDEKGKVLREGLKEXXXXXXXXXXXXXXXXXXXXXXXXGTMGIHVPSFQERVVAGLGPAIYQ 456          
BLAST of NO10G00100 vs. NCBI_GenBank
Match: OLP95390.1 (Crt-like 3 [Symbiodinium microadriaticum])

HSP 1 Score: 205.3 bits (521), Expect = 4.300e-49
Identity = 108/244 (44.26%), Postives = 143/244 (58.61%), Query Frame = 0
Query:   71 SCNSLTYKIMYEAYGPKGAFFVSTGVNVLYVIYGGLLLYPRMYFSDSVTPAMQALPKHRFLIMGFLDSCGTFLAAMGAVYTPGSVQTLLNQTLIPITMLVSFLYLKTRFTLIQLGGAAFVLAGAGITVLPTFWEGHKGGGEGIGGRPAPSRWYANLIFFLSNVPVACSQVYKEKAFKRDRVDVLYLTQWVSVFQLLFGLGLAPLQALPGIGSAHGVPISSIPSSFRRSWQCFLQTPTSGCADQH 315
            S N    KI Y AYG + +FFV+  +N+LY++YGG +LYPRM   D VTP M   PK  F++MG LDS GTFL  +G  YTPGS+  LLNQ LIP TMLVS ++L+      +  GAA ++ GA I+VLP      +            SRWYA L + LSN+P+A S  YKE  F+   +DV YLTQWVS++Q +      PL  +PG GS  G+    + S+F   W C+++     CAD H
Sbjct:   16 SMNFALLKITYTAYGDRRSFFVNQAINLLYILYGGAILYPRMLCKDVVTPEMMVFPKKHFVMMGTLDSMGTFLTCLGTAYTPGSLTPLLNQLLIPFTMLVSTVWLRIDSRWQERFGAALIVVGACISVLPDILP-DEDTTSTFQSLATQSRWYAILFYALSNLPMATSSCYKEATFEDIHLDVWYLTQWVSIWQFVVSFAYMPLLVMPGFGSKQGMSFHQVLSAFSDGWACYIEEDPD-CADGH 257          
BLAST of NO10G00100 vs. NCBI_GenBank
Match: XP_005770284.1 (hypothetical protein EMIHUDRAFT_102532 [Emiliania huxleyi CCMP1516] >EOD17855.1 hypothetical protein EMIHUDRAFT_102532 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 204.9 bits (520), Expect = 5.600e-49
Identity = 121/259 (46.72%), Postives = 160/259 (61.78%), Query Frame = 0
Query:  146 MGAVYTPGSVQTLLNQTLIPITMLVSFLYLKTRFTLIQLGGAAFVLAGAGITVLPTFWEGHKGGGEGIGGRPAPSRWYANLIFFLSNVPVACSQVYKEKAFKRDRVDVLYLTQWVSVFQLLFGLGLAPLQALPGIGSAHGVPISSIPSSFRRSWQCFLQTPTSGCADQHPSPSLLLLGFCGVNLTFNTAGLFVSKHGSAILNVITYAVLLPITTLLFSLHPLMGAYTEPLRATTVVGLLVVVLGFYLYQEPVLDLEKRS 405
            MGAVYTPG  QTLLNQ+LIP TM  S L+L  R++  QLG AA +++GA I+V                     +RWYA  +++LSNVP+A S VYKE  F    +DV YLTQWVS++Q+LFG  LAPL  LPG+G+A G+    I SSF     CF +   + C ++H     LL  + GVN  FNT GL+++KH  A+LN I+YA+LLP+TTL FSL P++G Y E   A T  GL VV+ GF L++   L  E ++
Sbjct:    1 MGAVYTPGQFQTLLNQSLIPATMAASALFLHERYSTGQLGAAALLVSGAVISV---------------------ARWYAVALYWLSNVPMALSAVYKEAHFAAQPMDVTYLTQWVSIWQMLFGFALAPLMLLPGVGTARGMRPGEIASSFADGAACFAER-DAACTERH--AFALLCVYVGVNFCFNTLGLWLTKHAGAVLNSISYALLLPLTTLGFSL-PVLGPYRESANAMTYAGLAVVLTGFVLWRYHSLVAEAKA 234          
BLAST of NO10G00100 vs. NCBI_GenBank
Match: XP_004352099.1 (transmembrane protein [Acanthamoeba castellanii str. Neff] >ELR22960.1 transmembrane protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 187.2 bits (474), Expect = 1.200e-43
Identity = 120/367 (32.70%), Postives = 194/367 (52.86%), Query Frame = 0
Query:   61 LALIVVLAVGSCNSLTYKIMYEAYGPKGAFFVSTGVNVLYVIYGGLLLYPRMYFSDSVTPAMQALPKHRFLIMGFLDSCGTFLAAMGAVYTPGSVQTLLNQTLIPITMLVSFLYLKTRFTLIQLGGAAFVLAGAGITVLPTFWEGHKGGGEGIGGRPAPSRWYANLIFFLSNVPVACSQVYKEKAFKRDRVDVLYLTQWVSVFQLLFGLGLAPLQALPGIGSAHGVPISSIPSSFRRSWQCFL---QTPTSGCADQHPSPSLLLLGFCGVNLTFNTAGLFVSKHGSAILNVITYAVLLPITTLLFSLHPLMGAYTEPLRATTVVGLLVVVLGFYLYQEPVLDLEKRSMA-EGREEVTAEEEEEGMKE 424
            L   +++  G  NS+T +     +G   A+F +    + Y +   ++   + +F++ +T  M+A P  +F + G  D    FL ++GA  TP ++Q ++NQT+IP+TM+ SF+ L+ R+ L ++GGA  +LAGA + ++P F                P+ WYA LI+  +NVP A S V KE AF +  +DV Y+  WV+ FQL   L L P+  LPG G   G+  S IP   +  + C L     P   C   +    + +L    VN  +N   L V+KH SA L  + +A+ LP+T ++++LH +M  +TE     T+V L+VV+LGF +Y       E  + A E  +++  ++E E  KE
Sbjct:   53 LYFFLLVLFGIANSVTGRYNQMKFGSNYAWFNNQFTTLTYCVLAQIITSYKYFFTNDITDEMKAFPVWKFFLFGVFDGLAGFLFSIGAPNTPATLQNIINQTIIPMTMVASFIVLRARYGLGKIGGAGIILAGAFVALIPLFTSNKNSDN-------PPALWYAILIYVSNNVPQALSNVTKELAFGQVVLDVYYMGSWVAWFQLGVSLSLLPVTMLPGFG---GISASDIPDQIQNGYFCLLGWNTLPGDSCEYNYLFTGMYVL----VNFGYNIFILLVTKHASATLFTLAFALRLPLTQVVYTLHFIMFQFTEDFNWETIVSLVVVLLGFAIYSAASSPAEPEAGADEENKDLLGKDEPELTKE 405          
BLAST of NO10G00100 vs. NCBI_GenBank
Match: EWM29290.1 (Transmembrane transporter protein, chloroquine resistant [Nannochloropsis gaditana])

HSP 1 Score: 184.5 bits (467), Expect = 7.800e-43
Identity = 130/361 (36.01%), Postives = 184/361 (50.97%), Query Frame = 0
Query:   50 ASTLDSATVLSLALIVVLAVGSCNSLTYKIMYEAYGPKGAFFVSTGVNVLYVIYGGLLLYPRMYFSDSVTPAMQALPKHRFLIMGFLDSCGTFLAAMGAVYTPGSVQTLLNQTLIPITMLVSFLYLKTRFTLIQLGGAAFVLAGAGITVLPTFWEGHKG--GGEGIGGRPAPSRWYANLIFFLSNVPVACSQVYKEKAFKRDRVDVLYLTQWVSVFQLLFGLGLAPLQALPGIGSAHGVPISSIPSSFRRSWQCFL---QTPTSGCADQHPSPSLLLLGFCGVNLTFNTAGLFVSKHGSAILNVITYAVLLPITTLLFSLHPLMGAYTEPLRATTVVGLLVVVLGFYLYQ--EPVLDLEKR 404
            A     A  L++ +       + N++ +K M  AY P   FF +     LYV+   L++  +     +     Q LP      MGFLD+ G+ L+ MG  YT G+VQTLLNQ +IP+T+ +SFL L  RFT  Q  GA  +  GAGI ++P+F  G KG   G      P  +     L+FF S +P A S VYKE  F +  VD+ YLT +VS  Q+LFG    P   +P  G   G+P+  IP  F   ++CF      P   C D   +  + +L    +N  FN   L ++KHG A L VI+ A+ LP+T   FS+  +MG  TEP      V L VV++GF LY   + ++D  K+
Sbjct:   53 AKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAG-KGARAGSXXXEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFG---GMPLREIPQQFTLGFKCFRGINTLPGDDCKDAFLTMWMYVL----INFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSAWDDLVDRRKK 405          
BLAST of NO10G00100 vs. NCBI_GenBank
Match: XP_002773711.1 (histone acetyltransferase gcn5, putative [Perkinsus marinus ATCC 50983] >EER05527.1 histone acetyltransferase gcn5, putative [Perkinsus marinus ATCC 50983])

HSP 1 Score: 169.9 bits (429), Expect = 2.000e-38
Identity = 124/346 (35.84%), Postives = 184/346 (53.18%), Query Frame = 0
Query:   58 VLSLALIVVLAVGSCNSLTYKIMYEAYGPKGAFFVSTGVNVLYVIYGGL-LLYPRMYFSDSVTPAMQALPKHRFLIMGFLDSCGTFLAAMGAVYTPGSVQTLLNQTLIPITMLVSFLYLKTRFTLIQLGGAAFVLAGAGITVLPTFWEGHKGGGEGIGGRPAPSRWYANLIFFLSNVPVACSQVYKEKAFKRDRVDVLYLTQWVSVFQLLFGLGLAPLQALPGI-GSAHGVPIS--SIPSSFRRSWQCFLQTPTSGCADQHPSPSLLLLGFCGVNLTFNTAGLFVSKHGS-----AILNVITYAVLLPITTLLFSLHPLMGA-YTEPLRATTVVGLLVVVLGFYLY 394
            ++ LAL++ +A GS N ++ KI+   YG   AFFV    NV Y++   +  +  R        P     P+++F IMG LD  GT  +++G   TPG  QT+LNQTLIP+TM+ S L L T +T   +G A  V   A +TV+P+F           G   A     +  ++FLSN+P+A S VYKE  F    V V  +T +V+ +Q +   GL  LQ +P + G   GVP+S  S+  +F  ++  F   P            LLLL +C VNL FN  G+ V+++GS     AI+  + YAV LP+++LL++   LMG  Y E     +++G++ V  GF LY
Sbjct:  439 LIVLALLLCIA-GSINDVSCKIVQNVYGQDYAFFVDQFCNVGYMVMTAIPAMVLRSERKREKDPQETFPPQYKFAIMGLLDGLGTLFSSIGGPSTPGQFQTVLNQTLIPVTMICSSLVLGTTYTGKSIGAAFIVFVSACVTVVPSF----------SGASVANCSGLSVCLYFLSNIPMALSNVYKESGFNNYSVGVWTMTAYVAAYQTIISFGLGFLQCVPYLSGQPGGVPLSPKSVVFNFLNAFS-FSVGPA----------GLLLLAYCVVNLVFNVLGVAVTRYGSALQVGAIMCSLAYAVKLPVSSLLYTSSFLMGEDYAESFSPYSLIGVVGVTTGFILY 762          
BLAST of NO10G00100 vs. NCBI_GenBank
Match: XP_004357135.1 (putative transmembrane protein [Cavenderia fasciculata] >EGG18312.1 putative transmembrane protein [Cavenderia fasciculata])

HSP 1 Score: 166.0 bits (419), Expect = 2.900e-37
Identity = 121/394 (30.71%), Postives = 197/394 (50.00%), Query Frame = 0
Query:   70 GSCNSLTYKIMYEAYGPKGAFFVSTGVNVLYV-IYGGLLLYPRMYFSDSVTPAMQALPKHRFLIMGFLDSCGTFLAAMGAVYTPGSVQTLLNQTLIPITMLVSFLYLKTRFTLIQLGGAAFVLAGAGITVLPTFWEGHKGGGEGIGGRPAPSR-WYANLIFFLSNVPVACSQVYKEKAFKR-DRVDVLYLTQWVSVFQLLFGLGLAPLQA-LPGIGSAHGVPISSIPSSFRRSWQCF-------------LQTPTSGCADQHPSPSLLLLGFCGVNLTFNTAGLFVSKHGSAILNVITYAVLLPITTLLFSLHPLMGAYTEPLRATTVVGLLVVVLGFYLYQEPVLDLEKRSMAEGREEVTAEEEEEGMKEGEWDMRVRVPSFQERVVAGLGPA 447
            G  NS+  K+   ++   G FF++   N  Y+ I+G ++ Y ++YF++ +    +  PK++FLIMG LD+   +   +G V T G +Q LLNQ +IP TML S ++LK R++LIQ+GGAA +L+G  ++++P+           + G P P+   + N  + +S +P A S VYK+  F+    +DV YL  W + FQ + G  L P+ A LPG      +P + +  + +    C              LQT    C   +    +++L +  +N+ +N   L V KH  A +  I   + LP+T ++FSLH +MGA   P    +V GL++++LG   Y+   +   K++  E   EV                       Q RV+ GLGPA
Sbjct:   53 GVINSILLKLTMNSFQNYG-FFLNQLTNYGYIPIFGAVVAY-KLYFTNDIPEETKLFPKYKFLIMGALDAVTGYFVVIGGVRTSGPLQQLLNQAIIPFTMLASLIFLKERYSLIQVGGAAVILSGVVVSLIPS-----------LTGPPDPTNSVFWNFFYLISIIPFAGSNVYKDIGFQAVADMDVWYLQFWDAFFQSIIGTFLFPINAILPGDAK---IPFNQVLPAMKNGALCLAGHDIIVDNCGTDLQTTCDNCHHAY----IIILCYMTINVIYNIFILLVIKHAGATVYSIANTLRLPLTNIVFSLHFIMGAAVTPFSGLSVAGLIIILLGLVGYRIGSMIKAKKAALENGGEV-----------------------QVRVIPGLGPA 403          
BLAST of NO10G00100 vs. NCBI_GenBank
Match: CEM02178.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 163.7 bits (413), Expect = 1.400e-36
Identity = 114/351 (32.48%), Postives = 181/351 (51.57%), Query Frame = 0
Query:   54 DSATVLSLALIVVLAVGSCNSLTYKIMYEAYGPKGAFFVSTGVNVLYV-IYGGLLLYPRMYFSDSVTPAMQALPKHRFLIMGFLDSCGTFLAAMGAVYTPGSVQTLLNQTLIPITMLVSFLYLKTRFTLIQLGGAAFVLAGAGITVLPTFWEGHKGGGEGIGGRPAPSRWYANLIFFLSNVPVACSQVYKEKAFKRDRVDVLYLTQWVSVFQLLFGLGLAPLQALPGIGSAHGVPISSIPSSFRRSWQCF--LQTPTSGCADQHPSPS-------LLLLGFCGVNLTFNTAGLFVSKHGSAILNVITYAVLLPITTLLFSLHPLMGAYTEPLRATTVVGLLVVVLGFYLYQ 395
            DS  + + +L ++L+   CNS+ +K M     P   +F++    V+YV I+  L++Y  M     +TP M++ P+ RF +MG  DS       +G V T G+ Q +L Q  IP+T+L + L L  R+  +Q  G+  ++AG  I+ LP+F      G           +++ NL+FFL++VP A S VYKE AF+   +DV  L  WV+ FQLL G  L P+  LP +G    +    IP++F    +C   + T T  C   H  P        +    +   N+ +N   + V KHGSA ++ +   + LP+T++ F    +MGA     RAT  +GLLV+++G   Y+
Sbjct:   72 DSLLLAAYSLGLLLS-SVCNSVFFKKMTNGM-PNYGWFLTQLTTVIYVPIFLSLVIYTDM--RGGITPEMKSFPRRRFAVMGAFDSLAGICMVLGGVNTSGTTQVILQQATIPVTLLATVLALSIRYHWMQYMGSTVIIAGVLISKLPSFMAAPDPGA-------PKDQFFFNLLFFLASVPTALSSVYKEVAFRDVDLDVNLLQYWVAAFQLLIGFLLVPINTLPMLGEQR-IEWVQIPAAFANGAKCLVGINTITEQCGGLHQPPCDACATAWIPTASYLLANVFYNVFTILVIKHGSAAISFLIATLRLPLTSMAFYSSFVMGADAMQPRATDFLGLLVIIVGLVGYR 410          
BLAST of NO10G00100 vs. NCBI_GenBank
Match: XP_642959.1 (hypothetical protein DDB_G0276943 [Dictyostelium discoideum AX4] >Q9GSB0.1 RecName: Full=Crt homolog 1; AltName: Full=Chloroquine resistance transporter paralog 1; Short=DdCRTp1 >AAG31811.1 putative transporter protein SSA662 [Dictyostelium discoideum] >EAL68973.1 hypothetical protein DDB_G0276943 [Dictyostelium discoideum AX4])

HSP 1 Score: 157.1 bits (396), Expect = 1.300e-34
Identity = 120/380 (31.58%), Postives = 195/380 (51.32%), Query Frame = 0
Query:   55 SATVLSLALIVVLAV--GSCNSLTYKIMYEAYGPKGAFFVSTGVNVLYV-IYGGLLLYPRMYFSDSVTPAMQALPKHRFLIMGFLDSCGTFLAAMGAVYTPGSVQTLLNQTLIPITMLVSFLYLKTRFTLIQLGGAAFVLAGAGITVLPTFWEGHKGGGEGIGGRPAPSRWYANLIFFLSNVPVACSQVYKEKAFKR-DRVDVLYLTQWVSVFQLLFGLGLAPL-------------QALPGI--GSAHGVPISSIPSSFRRSWQCFLQT-------PTSGCADQHPSPSLLLLGFCGVNLTFNTAGLFVSKHGSAILNVITYAVLLPITTLLFSLHPLMGAYTEPLRATTVVGLLVVVLGFYLYQEPVLDLEKRSMAEG 409
            S   +++ + VVL V  G  NS+  K +   +    AFF+S   N  YV I+G +  Y +++F+  +    +  P  +F IMG LD+   F   +G V T G +Q LLNQ +IP TM+ SF++LK R++LIQLGGA  ++ G   +++P+   G  GG          ++ + N  + LS +P A S VYK+  F+    +DV YL  W S++Q +FGL L P+             Q LP +  G+     I+SI  S+      F  T        T  C D H +  +++L +  +N+ +N   L V KH  A +  I   + LP+T ++FS+H +MG+   P    +V GL+++++G   Y+   +  +K++ A G
Sbjct:   46 SKETITILIYVVLYVTSGVINSVLLKKVMNKF-TNYAFFLSQLTNFGYVPIFGAVTAY-KIFFTKDIPQETRDFPTRKFAIMGALDAITGFFVVIGGVSTSGPLQQLLNQAIIPFTMIASFIFLKERYSLIQLGGALVIIGGVVTSLIPSLLGGSSGG----------NKPFWNFFYLLSVIPGALSNVYKDIGFQAVADMDVWYLQYWDSLYQSIFGLFLFPVNNWLPPPATVKFEQILPFMKEGAECLAGINSIIPSYINGTSSFTATSCTYAPDATITCDDCHNAWIVIIL-YMTINIIYNIFILLVLKHAGATVYSIANTLRLPLTNIVFSIHFIMGSAVSPFSGLSVAGLVIILVGLGGYRVGSMIKQKKAAAAG 412          
BLAST of NO10G00100 vs. NCBI_GenBank
Match: XP_646615.1 (hypothetical protein DDB_G0270204 [Dictyostelium discoideum AX4] >Q55C66.1 RecName: Full=Crt homolog 3; AltName: Full=Chloroquine resistance transporter paralog 3; Short=DdCRTp3 >EAL72452.1 hypothetical protein DDB_G0270204 [Dictyostelium discoideum AX4])

HSP 1 Score: 155.2 bits (391), Expect = 5.100e-34
Identity = 105/326 (32.21%), Postives = 169/326 (51.84%), Query Frame = 0
Query:   90 FFVSTGVNVLYVIYGGLLLYPRMYFSDSVTPAMQALPKHRFLIMGFLDSCGTFLAAMGAVYTPGSVQTLLNQTLIPITMLVSFLYLKTRFTLIQLGGAAFVLAGAGITVLPTFWEGHKGGGEGIGGRPAPSRWYANLIFFLSNVPVACSQVYKEKAFKRDRVDVLYLTQWVSVFQLLFGLGLAPL-------------QALPGI--------GSAHGVPISSIPSSFRRSWQCFLQTPTSGCADQHPSPSLLLLGFCGVNLTFNTAGLFVSKHGSAILNVITYAVLLPITTLLFSLHPLMGAYTEPLRATTVVGLLVVVLGFYLYQ 395
            FF+S   N  Y+    + ++ +MY +  V    +  P+++F+IMG LD+   F   +G V T G +Q LLNQ +IP TM+ SF++L+ R++L QLGGAA +L G  ++++P+   G  GG          +  + N  + +S +P A S VYK+ AF+   +DV YL  W  ++Q LFG  L P+             + +P +        G    +PI +  +S      C +      C D H +  +++L +  VN+ +N   L V KH  A +  I   V+LP+T + FS+H +MGA T P  A +V GLL+++ G   Y+
Sbjct:   85 FFLSQITNYGYLPIFLVAMWYKMYCTSDVPKETRNFPQYKFVIMGLLDAINGFFVVIGGVSTSGPLQQLLNQAIIPFTMIASFIFLRERYSLFQLGGAAVILGGVIVSLIPSLVGGSSGG----------NILFYNFFYLISVIPGALSNVYKDIAFQSIDMDVWYLQFWDCLYQSLFGSILFPVNNWLPPPATIKFTEIIPSMRDGALCLGGKNTILPIFNGTTSTLAFGSCGI-NDNFVCDDCH-NTWIIVLIYMTVNIAYNIFILLVLKHAGATVYSIANTVILPLTNIFFSIHFIMGAATTPFSALSVAGLLLILFGLGGYR 398          
The following BLAST results are available for this feature:
BLAST of NO10G00100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25227.11.200e-14963.84Transmembrane transporter protein, chloroquine res... [more]
OLP95390.14.300e-4944.26Crt-like 3 [Symbiodinium microadriaticum][more]
XP_005770284.15.600e-4946.72hypothetical protein EMIHUDRAFT_102532 [Emiliania ... [more]
XP_004352099.11.200e-4332.70transmembrane protein [Acanthamoeba castellanii st... [more]
EWM29290.17.800e-4336.01Transmembrane transporter protein, chloroquine res... [more]
XP_002773711.12.000e-3835.84histone acetyltransferase gcn5, putative [Perkinsu... [more]
XP_004357135.12.900e-3730.71putative transmembrane protein [Cavenderia fascicu... [more]
CEM02178.11.400e-3632.48unnamed protein product [Vitrella brassicaformis C... [more]
XP_642959.11.300e-3431.58hypothetical protein DDB_G0276943 [Dictyostelium d... [more]
XP_646615.15.100e-3432.21hypothetical protein DDB_G0270204 [Dictyostelium d... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL055nonsL055Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR091ncniR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007667NSK007667Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00100.1NO10G00100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO10G00100.2NO10G00100.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO10G00100.3NO10G00100.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|570059gene_10814Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100089g10gene5272Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00100.1NO10G00100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO10G00100.2NO10G00100.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO10G00100.3NO10G00100.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00100 ID=NO10G00100|Name=NO10G00100|organism=Nannochloropsis oceanica|type=gene|length=2729bp
GTGTGCTGAACCTCTTATACCACTCGCTTATCCTCGCTCATTCCCCATGG
GGAAATTTATGTCAGCACAGGAAATCAGCACGGAAGGAGGCCACCCAATG
CCGAACGCATCAAATGCCGCCGCCTCTCCCAGAACCAAGgtaagccgtcg
cctcctcttctagtgcgtggtgatttgtgcaaaagtgcaaggcctgtagc
acatgttaaagctacagaagcaaaaagagaggcccaaaatacctgtaatt
aataccttgcccaccgccttagcccttaccctcccttagtctagcacccg
ccgcaacgctaaccctaacactacaccttactcacaaccttgtcttcccc
atctcttccctatccaacagTACGGCACCCTCCCTTGCACGCCCCCCAGC
ACAGCCACCGTCGCTGCTCACCCTGCGTCTACCCTCGACTCCGCCACGGT
CCTTTCCCTGGCCCTCATCGTGGTCCTGGCAGTCGGCTCCTGCAATTCAT
TGACTTACAAAATCATGTACGAAGCCTACGGGCCCAAGGGCGCTTTCTTT
GTCTCAACGGGCGTCAATGTCCTGTATGTGATTTATGGAGGCCTCCTGCT
CTACCCCCGCATGTATTTCTCCGACAGCGTCACCCCCGCGATGCAAGCCC
TCCCCAAACATCGCTTTCTCATCATGGGCTTCCTCGACAGCTGCGGCACC
TTCTTAGCGGCCATGGGTGCCGTCTACACCCCTGGAAGCGTGCAAACCTT
GCTCAACCAAACCCTCATTCCCATCACCATGCTTGTCTCCTTCCTCTACC
TCAAGACGAGATTTACGCTCATCCAGCTCGGAGGCGCGGCCTTTGTCCTG
GCAGGGGCGGGTATCACAGTCTTACCCACCTTCTGGGAGGGTCACAAGGG
GGGCGGAGAAGGAATTGGAGGTAGACCGGCCCCATCGCGATGGTATGCGA
ACCTGATTTTCTTCCTTAGCAACGTCCCCGTGGCTTGCTCCCAAGTGgta
aggtctacaaggtggaaagggggaagaaggaaggcaggaagatcaggatg
tcgatttccacgacgaaggtttcagcatccattcacactcgtctagTCCT
CTCTTTCCTTAATCCATTCCTCATTTAATCGCCCACAGTACAAGGAGAAG
GCTTTCAAGCGGGACCGCGTCGACGTCCTCTACCTCACCCAGTGGGTCTC
CGTCTTCCAACTCCTCTTCGGTCTGGGCCTCGCCCCCCTCCAAGCCCTGC
CTGGCATTGGCAGCGCGCATGGCGTCCCCATTTCCTCTATCCCCTCCTCC
TTCAGGCGCAGCTGGCAATGCTTCCTGCAAACGCCCACGTCAGGCTGTGC
CGACCAGCACCCGTCCCCCTCCCTTCTCCTCCTTGGATTTTGCGGCGTTA
ACCTCACTTTCAACACGGCAGGCCTGTTCGTCTCAAAGCACGGGTCCGCC
ATTCTTAATGTGATCACGTACGCCGTACTCCTGCCCATTACCACCCTCCT
CTTCTCCCTCCATCCCTTGATGGGCGCCTACACCGAGCCTTTGCGAGCAA
CGACGGTGGTGGGGCTACTGGTCGTCGTGCTCGGCTTCTATCTCTATCAG
GAACCAGTCTTGGATCTGGAGAAAAGGAGCATGGCAGAAGGGAGAGAAGA
GGTGACGGCTGAGGAGGAGGAAGAGGGGATGAAGGAGGGGGAATGGGACA
TGCGTGTGAGGGTGCCGTCGTTTCAGGAGAGGGTAGTGGCAGGACTAGGG
CCAGCTGTGTTCCAGCAGTCGCATGGGAGCCAAGAGTATAACGCGCGTTA
CCACCACCACCACCACCATGACACTAAAACGGCGGTGGACGGCACGGCTC
GAGAGGGTGTTTAGCAGTGTAAAGACAATGTAGATCAAATGGTACAAATG
TTGAGTATCAAGTTTGCTGGCGTCATAATTTTCACTGGTCTTGGGATTCC
ATTGGTTACTTCATTCCACCAGTCATTCCTGCTCCTTTCTCTCTGTCTTA
CAACTTTGACTGCTTGCGTCTCTTCTTTGTCTTCCTTTCCTGACCCTCTT
CCTCCGTACGATCTCTTTACATGCTTCTTTCTCCTCCCCCCCCCCTCTTT
TTCCACTCCACCCCAACCCTCCTTACTTAGCCGCCGTGCTTTCTGCCTCC
GGATGCTCCTTCAACCATTTGGGGCTATACACTGCAGGAACTGCGTCGAT
CAACCCCGCCATAATCAAATCATTCTCCGTCAGTCCTCCCACGGCATGCG
TGTACAACACAATTTCCACCTCCCTATAGCTCGTCAAGTGTAAGTCCGGG
TGGTGGCCTTCCGCTTCGGCCACGGCCCCCACAGCGTTAAGGAAAGCAAG
TGCGGCAGCGAAGTTCTTGGCGATGAACGCACGGGACAGGCGCTTGTGGT
CGTCGCTTGCCTTCCACAAGGGCAGAGAGGGAAGGACAGCCTGCACGCGC
TCAAGCGGTACGGCGGGGAGGCCGCCTTCGCATGGGACGCAATGCTTGTG
AGCGTCCCGGGAACAGGTCTCGCTCATGCTATTGGAGCTACTGGTGGCAG
ACGACAAAAACGCAGCAGCGGTGGCAATTACGATAAAAATAAGGGAAACG
CCGAGGTTTAGGTGCATGCACGGCGGTGCTGAAGTGATGCTGTGTGTGAG
CTGTTGCAGTGTGAGATGCTATGTGACAGCAGTGAAGTTGGAGGGCCATG
CTCGTCGCCGAAAAGCATTTTTTTTTTAA
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protein sequence of NO10G00100.1

>NO10G00100.1-protein ID=NO10G00100.1-protein|Name=NO10G00100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=496bp
MGKFMSAQEISTEGGHPMPNASNAAASPRTKYGTLPCTPPSTATVAAHPA
STLDSATVLSLALIVVLAVGSCNSLTYKIMYEAYGPKGAFFVSTGVNVLY
VIYGGLLLYPRMYFSDSVTPAMQALPKHRFLIMGFLDSCGTFLAAMGAVY
TPGSVQTLLNQTLIPITMLVSFLYLKTRFTLIQLGGAAFVLAGAGITVLP
TFWEGHKGGGEGIGGRPAPSRWYANLIFFLSNVPVACSQVSSLSLIHSSF
NRPQYKEKAFKRDRVDVLYLTQWVSVFQLLFGLGLAPLQALPGIGSAHGV
PISSIPSSFRRSWQCFLQTPTSGCADQHPSPSLLLLGFCGVNLTFNTAGL
FVSKHGSAILNVITYAVLLPITTLLFSLHPLMGAYTEPLRATTVVGLLVV
VLGFYLYQEPVLDLEKRSMAEGREEVTAEEEEEGMKEGEWDMRVRVPSFQ
ERVVAGLGPAVFQQSHGSQEYNARYHHHHHHDTKTAVDGTAREGV*
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protein sequence of NO10G00100.2

>NO10G00100.2-protein ID=NO10G00100.2-protein|Name=NO10G00100.2|organism=Nannochloropsis oceanica|type=polypeptide|length=482bp
MGKFMSAQEISTEGGHPMPNASNAAASPRTKYGTLPCTPPSTATVAAHPA
STLDSATVLSLALIVVLAVGSCNSLTYKIMYEAYGPKGAFFVSTGVNVLY
VIYGGLLLYPRMYFSDSVTPAMQALPKHRFLIMGFLDSCGTFLAAMGAVY
TPGSVQTLLNQTLIPITMLVSFLYLKTRFTLIQLGGAAFVLAGAGITVLP
TFWEGHKGGGEGIGGRPAPSRWYANLIFFLSNVPVACSQVYKEKAFKRDR
VDVLYLTQWVSVFQLLFGLGLAPLQALPGIGSAHGVPISSIPSSFRRSWQ
CFLQTPTSGCADQHPSPSLLLLGFCGVNLTFNTAGLFVSKHGSAILNVIT
YAVLLPITTLLFSLHPLMGAYTEPLRATTVVGLLVVVLGFYLYQEPVLDL
EKRSMAEGREEVTAEEEEEGMKEGEWDMRVRVPSFQERVVAGLGPAVFQQ
SHGSQEYNARYHHHHHHDTKTAVDGTAREGV*
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protein sequence of NO10G00100.3

>NO10G00100.3-protein ID=NO10G00100.3-protein|Name=NO10G00100.3|organism=Nannochloropsis oceanica|type=polypeptide|length=417bp
MYEAYGPKGAFFVSTGVNVLYVIYGGLLLYPRMYFSDSVTPAMQALPKHR
FLIMGFLDSCGTFLAAMGAVYTPGSVQTLLNQTLIPITMLVSFLYLKTRF
TLIQLGGAAFVLAGAGITVLPTFWEGHKGGGEGIGGRPAPSRWYANLIFF
LSNVPVACSQVSSLSLIHSSFNRPQYKEKAFKRDRVDVLYLTQWVSVFQL
LFGLGLAPLQALPGIGSAHGVPISSIPSSFRRSWQCFLQTPTSGCADQHP
SPSLLLLGFCGVNLTFNTAGLFVSKHGSAILNVITYAVLLPITTLLFSLH
PLMGAYTEPLRATTVVGLLVVVLGFYLYQEPVLDLEKRSMAEGREEVTAE
EEEEGMKEGEWDMRVRVPSFQERVVAGLGPAVFQQSHGSQEYNARYHHHH
HHDTKTAVDGTAREGV*
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Synonyms
Publications