NO09G00980, NO09G00980 (gene) Nannochloropsis oceanica

Overview
NameNO09G00980
Unique NameNO09G00980
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1344
Alignment locationchr9:331722..333065 +

Link to JBrowse

Properties
Property NameValue
Description26s proteasome subunit 4
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:331722..333065 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
GO:0009056catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
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BLAST of NO09G00980 vs. NCBI_GenBank
Match: EWM27689.1 (26s proteasome subunit 4 [Nannochloropsis gaditana])

HSP 1 Score: 770.0 bits (1987), Expect = 4.000e-219
Identity = 401/447 (89.71%), Postives = 406/447 (90.83%), Query Frame = 0 
Query:    1 MGQGAPGGMPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            MGQG PGGMPP                                      PSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLE EFIRNQEVFRPHEEKDQEERAKVE+LRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPG TVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKE+VELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMT+S+DVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQ+DFVKAKEKALYRKKGNIPVSMYL
Sbjct:    1 MGQGTPGGMPPPGGQLPGQGDQKKEDKAKKKKFEPRPAVRSGRRRRRKGPSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEGEFIRNQEVFRPHEEKDQEERAKVEELRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGSTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKESVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLSEDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQDDFVKAKEKALYRKKGNIPVSMYL 447
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BLAST of NO09G00980 vs. NCBI_GenBank
Match: CBJ33278.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 719.2 bits (1855), Expect = 8.200e-204
Identity = 357/398 (89.70%), Postives = 385/398 (96.73%), Query Frame = 0 
Query:   50 PSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            PS AVR PQVFPT+KC+LRLLKL+RIKDFL+LE+E+IRNQEVF+P EEKDQEER KV+DLRGSPL+VG LEEMIDDNHAIVSSSVGPEYYV V+SFVNQDLLEPG +VLLHNKVM+VVGIL DD DPMVSVMKV+KAPLE+YADIGGLESQIQEIKEAVELPLTHPELYEDIGI+PPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAD++SP++VFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMT++DDVDLE+F+MAKDELSGADIKA+CTE+GLLALRERRMKVT +DF KAKEKALYRKKGN+P  +YL
Sbjct:   49 PSVAVRTPQVFPTAKCRLRLLKLERIKDFLMLEKEYIRNQEVFKPREEKDQEERQKVDDLRGSPLSVGTLEEMIDDNHAIVSSSVGPEYYVNVMSFVNQDLLEPGSSVLLHNKVMSVVGILGDDADPMVSVMKVDKAPLETYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADEMSPTLVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLADDVDLEIFIMAKDELSGADIKAICTESGLLALRERRMKVTMDDFTKAKEKALYRKKGNVPEGLYL 446
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BLAST of NO09G00980 vs. NCBI_GenBank
Match: XP_002900803.1 (26S protease regulatory subunit 4 [Phytophthora infestans T30-4] >EEY59610.1 26S protease regulatory subunit 4 [Phytophthora infestans T30-4])

HSP 1 Score: 703.7 bits (1815), Expect = 3.500e-199
Identity = 351/396 (88.64%), Postives = 381/396 (96.21%), Query Frame = 0 
Query:   52 AAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            AAVRIP V+PT+KCKLRLLK++RIKDFLL+E+EFI+NQEV +P +EKD+EER+KV+DLRG+P+ VG LEEMIDDNHAIVSSSVGPEYYVGV+SFVNQD+LEPGC+VLLHNKVM+VVGIL+DDTDPMVSVMKV+KAPLESYADIGGLESQIQEIKEAVELPLTHPELYE IGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLR+VGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRM++ DDVDLE FVM+KDELSGADIKAVCTEAGLLALRERRM+VTQ DF KAKEKALY+KK NIP  +YL
Sbjct:   50 AAVRIPTVYPTAKCKLRLLKMERIKDFLLMEQEFIQNQEVMKPKQEKDEEERSKVDDLRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVGVMSFVNQDMLEPGCSVLLHNKVMSVVGILADDTDPMVSVMKVDKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEGIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMSLGDDVDLEEFVMSKDELSGADIKAVCTEAGLLALRERRMRVTQSDFRKAKEKALYKKKANIPEGLYL 445
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BLAST of NO09G00980 vs. NCBI_GenBank
Match: XP_008896011.1 (26S protease regulatory subunit 4 [Phytophthora parasitica INRA-310] >ETI36337.1 26S protease regulatory subunit 4 [Phytophthora parasitica P1569] >ETK76564.1 26S protease regulatory subunit 4 [Phytophthora parasitica] >ETL30007.1 26S protease regulatory subunit 4 [Phytophthora parasitica] >ETL83228.1 26S protease regulatory subunit 4 [Phytophthora parasitica] >ETM36448.1 26S protease regulatory subunit 4 [Phytophthora parasitica] >ETN18319.1 26S protease regulatory subunit 4 [Phytophthora parasitica INRA-310] >ETO65058.1 26S protease regulatory subunit 4 [Phytophthora parasitica P1976] >ETP06177.1 26S protease regulatory subunit 4 [Phytophthora parasitica CJ01A1] >KUF93632.1 hypothetical protein AM588_10005956 [Phytophthora nicotianae] >KUG02052.1 26S proteasome regulatory subunit 4 B [Phytophthora nicotianae])

HSP 1 Score: 703.0 bits (1813), Expect = 6.100e-199
Identity = 350/396 (88.38%), Postives = 382/396 (96.46%), Query Frame = 0 
Query:   52 AAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            AAVRIP V+PT+KCKLRLLK++RIKDFLL+E+EFI+NQEV +P +EKD+EER+KV+DLRG+P+ VG LEEMIDDNHAIVSSSVGPEYYVGV+SFVNQD+LEPGC+VLLHNKVM+VVGIL+DDTDPMVSVMKV+KAPLESYADIGGLE+QIQEIKEAVELPLTHPELYE IGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLR+VGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRM+++DDVDLE FVM+KDELSGADIKAVCTEAGLLALRERRM+VTQ DF KAKEKALY+KK NIP  +YL
Sbjct:   50 AAVRIPTVYPTAKCKLRLLKMERIKDFLLMEQEFIQNQEVMKPKQEKDEEERSKVDDLRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVGVMSFVNQDMLEPGCSVLLHNKVMSVVGILADDTDPMVSVMKVDKAPLESYADIGGLETQIQEIKEAVELPLTHPELYEGIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMSLADDVDLEEFVMSKDELSGADIKAVCTEAGLLALRERRMRVTQSDFRKAKEKALYKKKANIPEGLYL 445
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BLAST of NO09G00980 vs. NCBI_GenBank
Match: XP_009521651.1 (hypothetical protein PHYSODRAFT_354148 [Phytophthora sojae] >EGZ26363.1 hypothetical protein PHYSODRAFT_354148 [Phytophthora sojae] >POM76448.1 26S protease regulatory subunit 4 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 701.0 bits (1808), Expect = 2.300e-198
Identity = 349/394 (88.58%), Postives = 380/394 (96.45%), Query Frame = 0 
Query:   54 VRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            VRIP V+PT+KCKLRLLK++RIKDFLL+E+EFI+NQEV +P +EKD+EER+KV+DLRG+P+ VG LEEMIDDNHAIVSSSVGPEYYVGV+SFVNQD+LEPGC+VLLHNKVM+VVGIL+DDTDPMVSVMKV+KAPLESYADIGGLESQIQEIKEAVELPLTHPELYE IGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLR+VGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRM+++DDVDLE FVM+KDELSGADIKAVCTEAGLLALRERRM+VTQ DF KAKEKALY+KK NIP  +YL
Sbjct:   52 VRIPTVYPTAKCKLRLLKMERIKDFLLMEQEFIQNQEVMKPKQEKDEEERSKVDDLRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVGVMSFVNQDMLEPGCSVLLHNKVMSVVGILADDTDPMVSVMKVDKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEGIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMSLADDVDLEEFVMSKDELSGADIKAVCTEAGLLALRERRMRVTQSDFRKAKEKALYKKKANIPEGLYL 445
[Close]
BLAST of NO09G00980 vs. NCBI_GenBank
Match: ETP34278.1 (26S protease regulatory subunit 4 [Phytophthora parasitica P10297])

HSP 1 Score: 701.0 bits (1808), Expect = 2.300e-198
Identity = 349/396 (88.13%), Postives = 381/396 (96.21%), Query Frame = 0 
Query:   52 AAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            AAV IP V+PT+KCKLRLLK++RIKDFLL+E+EFI+NQEV +P +EKD+EER+KV+DLRG+P+ VG LEEMIDDNHAIVSSSVGPEYYVGV+SFVNQD+LEPGC+VLLHNKVM+VVGIL+DDTDPMVSVMKV+KAPLESYADIGGLE+QIQEIKEAVELPLTHPELYE IGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLR+VGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRM+++DDVDLE FVM+KDELSGADIKAVCTEAGLLALRERRM+VTQ DF KAKEKALY+KK NIP  +YL
Sbjct:   50 AAVHIPTVYPTAKCKLRLLKMERIKDFLLMEQEFIQNQEVMKPKQEKDEEERSKVDDLRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVGVMSFVNQDMLEPGCSVLLHNKVMSVVGILADDTDPMVSVMKVDKAPLESYADIGGLETQIQEIKEAVELPLTHPELYEGIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMSLADDVDLEEFVMSKDELSGADIKAVCTEAGLLALRERRMRVTQSDFRKAKEKALYKKKANIPEGLYL 445
[Close]
BLAST of NO09G00980 vs. NCBI_GenBank
Match: XP_024586084.1 (26s protease regulatory subunit 4 [Plasmopara halstedii] >CEG49715.1 26s protease regulatory subunit 4 [Plasmopara halstedii])

HSP 1 Score: 700.7 bits (1807), Expect = 3.000e-198
Identity = 349/396 (88.13%), Postives = 381/396 (96.21%), Query Frame = 0 
Query:   52 AAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            AAVRIP V+PT+KCKLRLLK++RIKDFLL+E+EFI+NQEV +P +EKD+EER+KV+DLRG+P+ VG LEEMIDDNHAIVSSSVGPEYYVGV+SFVNQD+LEPGC+VLLHNKVM+VVGIL+DD DPMVSVMKV+KAPLESYADIGGLESQIQEIKEAVELPLTHPELYE IGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLR+VGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRM++++DVDLE FVM+KDELSGADIKAVCTEAGLLALRERRM+VTQ DF KAKEKALY+KK NIP  +YL
Sbjct:   50 AAVRIPTVYPTAKCKLRLLKMERIKDFLLMEQEFIQNQEVMKPKQEKDEEERSKVDDLRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVGVMSFVNQDMLEPGCSVLLHNKVMSVVGILADDADPMVSVMKVDKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEGIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMSLAEDVDLEEFVMSKDELSGADIKAVCTEAGLLALRERRMRVTQSDFRKAKEKALYKKKANIPEGLYL 445
[Close]
BLAST of NO09G00980 vs. NCBI_GenBank
Match: OQR93739.1 (26S protease regulatory subunit 4 [Achlya hypogyna])

HSP 1 Score: 696.8 bits (1797), Expect = 4.300e-197
Identity = 350/398 (87.94%), Postives = 377/398 (94.72%), Query Frame = 0 
Query:   50 PSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            PS A RIP VFPT+KCKLRLLKL+RIKDFLLLEEEFI+NQEV +P +EKD+EER+KV+DLRG+P+ VG LEEMIDDNHAIVSSSVGPEYYV V+SFVNQD+LE GC+VLLHNKVMAVVGILS+DTDPMVSVMKV+KAPLESYADIGGL+ QIQEIKEAVELPLTHPELYE IGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPD+KTKRRIF IHT RM++SDDV+LE FVM+KDELSGADIKAVCTEAGLLALRERRM+VTQ DF KAKEKALY+KK NIP  +YL
Sbjct:   43 PSVATRIPAVFPTAKCKLRLLKLERIKDFLLLEEEFIKNQEVMKPKQEKDEEERSKVDDLRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVSVMSFVNQDMLEAGCSVLLHNKVMAVVGILSNDTDPMVSVMKVDKAPLESYADIGGLDQQIQEIKEAVELPLTHPELYEGIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIESLDPALIRPGRIDRKIEFPLPDVKTKRRIFAIHTSRMSLSDDVELEEFVMSKDELSGADIKAVCTEAGLLALRERRMRVTQSDFRKAKEKALYKKKANIPEGLYL 440
[Close]
BLAST of NO09G00980 vs. NCBI_GenBank
Match: CCI47533.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 696.4 bits (1796), Expect = 5.700e-197
Identity = 347/398 (87.19%), Postives = 379/398 (95.23%), Query Frame = 0 
Query:   50 PSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            PSAAVRIP V+PT+KCKLRLLKL+RIKDFLL+E+EFI+NQEV +P  EKD+EER+KV+DLRG+P+ VG LEE+IDDNHAIVSSSVGPEYYV V+SFVNQD+LE GC+VLLHNKVM+VVGILSDDTDPMVSVMKV+KAPLESYADIGGL++QIQEIKEAVELPLTHPELYE IGI+PPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE+FRVA+DL+PSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATN I+SLDPALIRPGRIDRKIEFPLPD KTKRRIF IHTGRM++SDDVDLE F+M+KDELSGADIKA+CTEAGLLALRERRM+VT  DF KAKEKALYRKK NIP  +YL
Sbjct:   45 PSAAVRIPTVYPTAKCKLRLLKLERIKDFLLMEQEFIQNQEVMKPKHEKDEEERSKVDDLRGNPMGVGTLEEIIDDNHAIVSSSVGPEYYVSVMSFVNQDMLETGCSVLLHNKVMSVVGILSDDTDPMVSVMKVDKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEGIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVAEDLAPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIQSLDPALIRPGRIDRKIEFPLPDTKTKRRIFQIHTGRMSLSDDVDLEEFIMSKDELSGADIKAICTEAGLLALRERRMRVTHVDFAKAKEKALYRKKANIPEGLYL 442
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BLAST of NO09G00980 vs. NCBI_GenBank
Match: CCA21636.1 (26S proteasome AAAATPase subunit RPT2a putative [Albugo laibachii Nc14])

HSP 1 Score: 695.7 bits (1794), Expect = 9.700e-197
Identity = 346/398 (86.93%), Postives = 379/398 (95.23%), Query Frame = 0 
Query:   50 PSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            PSAAVRIP V+PT+KCKLRLLKL+RIKDFLL+E+EFI+NQEV +P  EKD+EER+KV+DLRG+P++VG LEE+IDDNHAIVSSSVGPEYYV V+SFVNQD+LE GC+VLLHNKVM+VVGILSDDTDPMVSVMKV+KAPLESYADIGGL++QIQEIKEAVELPLTHPELYE IGI+PPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE+FRVA+DL+PSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATN I+SLDPALIRPGRIDRKIEFPLPD KTKRRIF IHTGRM++ DDVDLE F+M+KDELSGADIKA+CTEAGLLALRERRM+VT  DF KAKEKALYRKK NIP  +YL
Sbjct:   45 PSAAVRIPTVYPTAKCKLRLLKLERIKDFLLMEQEFIQNQEVMKPKHEKDEEERSKVDDLRGNPMSVGTLEEIIDDNHAIVSSSVGPEYYVSVMSFVNQDMLETGCSVLLHNKVMSVVGILSDDTDPMVSVMKVDKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEGIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVAEDLAPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNSIQSLDPALIRPGRIDRKIEFPLPDTKTKRRIFQIHTGRMSLGDDVDLEEFIMSKDELSGADIKAICTEAGLLALRERRMRVTHVDFAKAKEKALYRKKANIPEGLYL 442
The following BLAST results are available for this feature:
BLAST of NO09G00980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27689.14.000e-21989.7126s proteasome subunit 4 [Nannochloropsis gaditana... [more]
CBJ33278.18.200e-20489.70conserved unknown protein [Ectocarpus siliculosus][more]
XP_002900803.13.500e-19988.6426S protease regulatory subunit 4 [Phytophthora in... [more]
XP_008896011.16.100e-19988.3826S protease regulatory subunit 4 [Phytophthora pa... [more]
XP_009521651.12.300e-19888.58hypothetical protein PHYSODRAFT_354148 [Phytophtho... [more]
ETP34278.12.300e-19888.1326S protease regulatory subunit 4 [Phytophthora pa... [more]
XP_024586084.13.000e-19888.1326s protease regulatory subunit 4 [Plasmopara hals... [more]
OQR93739.14.300e-19787.9426S protease regulatory subunit 4 [Achlya hypogyna... [more]
CCI47533.15.700e-19787.19unnamed protein product [Albugo candida][more]
CCA21636.19.700e-19786.9326S proteasome AAAATPase subunit RPT2a putative [A... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010574NSK010574Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G00980.1NO09G00980.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589192gene_4458Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100104g13gene2870Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G00980.1NO09G00980.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G00980 ID=NO09G00980|Name=NO09G00980|organism=Nannochloropsis oceanica|type=gene|length=1344bp
ATGGGACAAGGAGCTCCGGGGGGCATGCCTCCGCCGGGCGGGCAAGGCCC
TGGTCAGGGCGAGCAGAAGAAGGAGGACAAGACCAAGAAAAAGAAATTTG
AACCCCGCCCGGCGGCTAGGAGCGGGCGTCGCCGTCGTCGCAAGGGCCCT
TCCGCAGCCGTTCGCATCCCGCAAGTTTTTCCCACGTCCAAGTGCAAGCT
ACGACTGCTCAAGCTTGACCGTATCAAGGATTTCTTATTGCTGGAGGAGG
AGTTTATCCGCAACCAGGAAGTGTTTCGTCCCCATGAGGAGAAGGACCAG
GAGGAACGGGCCAAGGTAGAGGACCTGCGGGGCAGTCCCTTGGCGGTTGG
GAACCTGGAGGAGATGATCGACGACAACCACGCAATTGTCTCATCCTCGG
TAGGCCCCGAGTACTACGTGGGCGTGCTGTCTTTTGTGAACCAGGACTTG
CTGGAACCCGGGTGCACGGTGCTGCTGCACAACAAGGTGATGGCGGTGGT
GGGCATCTTGTCAGACGACACAGACCCTATGGTTTCTGTCATGAAGGTGG
AGAAGGCCCCCCTGGAATCCTATGCCGACATTGGCGGGCTGGAGTCGCAG
ATCCAGGAGATCAAGGAGGCGGTAGAGCTGCCCTTGACCCACCCAGAGCT
TTACGAGGACATAGGTATTCGGCCCCCCAAGGGCGTCATTCTGTATGGCG
AGCCAGGCACGGGGAAGACCTTACTAGCCAAGGCCGTAGCCAACCAGACA
TCGGCAACATTCTTGCGCGTGGTGGGCTCGGAGCTAATTCAGAAGTATCT
AGGTGATGGTCCCAAGTTGGTGCGGGAGCTCTTTCGGGTGGCGGACGACT
TGTCACCGTCAATTGTGTTTATCGATGAGATTGACGCGGTGGGTTCCAAG
CGGTATGATTCCAACTCGGGGGGCACGCGGGAGATCCAGCGGACGATGTT
GGAGTTGTTGAACCAGCTGGATGGTTTTGATGAGCGGGGAGACGTTAAGG
TGATCATGGCTACTAATAAAATTGAGTCCCTCGATCCTGCCCTTATTCGT
CCCGGGCGAATTGATCGAAAGATTGAATTTCCCCTTCCAGATATCAAGAC
AAAGCGTCGAATTTTCGGGATCCACACGGGGCGGATGACCATGAGCGATG
ACGTGGACTTGGAAGTGTTCGTCATGGCGAAGGACGAGCTGAGCGGCGCG
GACATCAAGGCGGTGTGCACCGAGGCGGGGCTGTTGGCGCTGCGGGAGAG
GAGGATGAAGGTGACTCAGGAGGACTTTGTCAAGGCCAAGGAGAAGGCGT
TGTACCGGAAGAAGGGCAACATCCCCGTCTCTATGTACTTGTAA
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protein sequence of NO09G00980.1

>NO09G00980.1-protein ID=NO09G00980.1-protein|Name=NO09G00980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=448bp
MGQGAPGGMPPPGGQGPGQGEQKKEDKTKKKKFEPRPAARSGRRRRRKGP
SAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQ
EERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDL
LEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQ
IQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQT
SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSK
RYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIR
PGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGA
DIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL*
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Synonyms
Publications