Naga_100104g13, gene2870 (gene) Nannochloropsis gaditana

Overview
NameNaga_100104g13
Unique Namegene2870
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:430926..432600 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100104g13
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:430926..432600 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0019538protein metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G00980NO09G00980Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2991rna2991-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2991rna2991Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2991

>rna2991-protein ID=rna2991-protein|Name=rna2991|organism=Nannochloropsis gaditana|type=polypeptide|length=447bp
MGQGTPGGMPPPGGQLPGQGDQKKEDKAKKKKFEPRPAVRSGRRRRRKGP
SAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEGEFIRNQEVFRPHEEKDQ
EERAKVEELRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDL
LEPGSTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQ
IQEIKESVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQT
SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSK
RYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIR
PGRIDRKIEFPLPDIKTKRRIFGIHTGRMTLSEDVDLEVFVMAKDELSGA
DIKAVCTEAGLLALRERRMKVTQDDFVKAKEKALYRKKGNIPVSMYL
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Synonyms
Publications