NO08G00380, NO08G00380 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00380 vs. NCBI_GenBank
Match: EWM26475.1 (hypothetical protein Naga_100045g21 [Nannochloropsis gaditana]) HSP 1 Score: 593.2 bits (1528), Expect = 1.200e-165 Identity = 352/537 (65.55%), Postives = 409/537 (76.16%), Query Frame = 0
Query: 240 MAHPANFWIQGNTEATGKGSAFVTGGGMVEGNIKWASHMLDSDPEFNLYEGISNVSSTDRVRGLRKRRLSGAALTDAVSLFDDDADGGSSKLLAVGLDVDNLLDVRAEGIDEKFKSWVPEKLLKAAGDIAALRESPAFIKA-TKDSELNNYLNREPLTLQINNEHLDYCGVCETELVGGKGLDTCDVEDSCAVLQAGAPAGVQAAFDFGDVAFDPTHVVVAEFLPTTGAEVEEGGLDPEWLRRALQGYFKANGTSGIHVSTFSGMPDDFFTGLADATAPATRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALANAEYPNTHVLKAVFVTSDTAKAQALATALSEKSSEGYQDMDLYVGDYLNAREGVLIQALDGVVLQQFNVPAYASLDFTKAFADEVGSAAGEQSVRLVDSENLGMPLSRAVAGKEYNVELAGFPAGVFLSVSLFGRDATGDKQTAALVKRVVTTDKTGGAAFAWTVPRGQAKGDYYLKASDVTGKVFGMSTTFEVDRQAKRRLVGPWHTVE 776
M PANFWIQGN A G+G +VTG N+ S ML S P L + S +R RRLSG+ DA+ LFDD + G SKLLA+GLDVDN LDVR +G+ +KF+SWVPEK +K A D+AAL+ES A A KD + ++ P+ L++ NE LDYCG+CET+LVGGKGL+TC+V DSCA L+ AP G QAAFD GDV+FDPTH+V+AEFLPTTGA VEEG DP LRRALQG+ K NGT+G+ VSTF M D FF GLADATAPATRA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ANA +PNTH L+AVFVT+D AKA+AL +AL++ SSEGYQ MD YVGD+L EGV IQALDG +LQ NVPAYAS+DFTKAFA +VG+AAG QSVRL+D N GMPLSRAV GK+Y VELAGFP FLSV+L+GRD TG+KQTAALVK+V+TTD+ G A FAWTVP Q GDYYLKA D+TGKVFGMST+FEVD++ KRRLVGP HTVE
Sbjct: 754 MMMPANFWIQGNIMAMGRGGEYVTGKKKNNHNMTMRSRMLSSKPVLKLPQERGGSKSLEREPDHGVRRLSGSTFMDALDLFDDGDERG-SKLLAIGLDVDNDLDVRKDGMADKFRSWVPEKFIKVAADVAALKESIALRSAGEKDPPRRSKIH--PINLRVENEGLDYCGICETDLVGGKGLNTCNVMDSCADLREQAPEGTQAAFDMGDVSFDPTHMVMAEFLPTTGASVEEGSFDPSMLRRALQGFLKKNGTTGVQVSTFPAMQDKFFMGLADATAPATRA--RRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLFANANFPNTHALRAVFVTTDAAKAEALTSALTDASSEGYQKMDKYVGDFLKTYEGVSIQALDGKLLQNINVPAYASIDFTKAFAQDVGAAAGSQSVRLIDPVNAGMPLSRAVVGKDYEVELAGFPKQTFLSVTLYGRDPTGEKQTAALVKKVLTTDRNGNANFAWTVPVDQTPGDYYLKAGDLTGKVFGMSTSFEVDQKPKRRLVGPSHTVE 1285
BLAST of NO08G00380 vs. NCBI_GenBank
Match: XP_005853964.1 (hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526] >EKU22398.1 hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 251.1 bits (640), Expect = 1.100e-62 Identity = 174/476 (36.55%), Postives = 251/476 (52.73%), Query Frame = 0
Query: 298 DRVRGLR-KRRLSGAALTDAVSLFDDDADGGSSKLLAVGLDVDNLLDVRAEGIDEKFKSWVPEKLLKAAGDIAALRESPAFIKATKDSELNNYLNREPLTLQINNEHLDYCGVCETELVGGKGLDTCDVEDSCAVLQAGAPAGVQAAFDFGDVAFDPTHVVVAEFLPTTGAEVEEGGLDPEWLRRALQGYFKANGTSGIHVSTFSGMPDDFFTGLADATAPATRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALANAEYPNTHVLKAVFVTSDTAKAQALATALSEKSSEGYQDMDLYVGDYLNAREGVLIQALDGVVLQQFNVPAYASLDFTKAFADEVGSAAGEQSVRLVDSENLGMPLSRAVAGKEYNVELAGFPAGVFLSVSLFG-RDATG-DKQTAALVKRVVTTDKTGGAAFAWTVPRGQAKGDYYLKASDVTGKVFGMSTTFEVDRQAKRRLVGP 771
+ VR LR +RRLS +A++D + F DADGG S L L V +D+ + ++ SWVP +L+ A DI L ++ + + R PL L++ + + C C V G C DSC L+ APAG +AAFD +V +D HVV+A F PTT A + PE R A + YF AN T+G+ VS F PD+ F A A ALA+ ++P + L+AVF+ +D KA+A+A+AL + +S Y+DM+LYV D+L+ +GV I A+DG + + VPAY + +++KAFA E +AAG S+RL+D E+ G+P+S AG+ Y V L+ FP + ++V L G ++ G +KQT + + + TDK G A+ W VP Q GDYYLKA+D TG +FGM+ + EV KRRL GP
Sbjct: 618 NEVRKLRAERRLSVSAVSDLLFNF-MDADGGVS-FLGADLKVQPYIDLGNNEVVKELSSWVPAGILQGAKDIGLL------------NKFGSEVGRGPL-LEMQADSVTECQFCGEGDVVGSNKGACTKFDSCNALKEKAPAGSEAAFDSNEVEYDAWHVVMATFNPTTPA---GESVAPEDFRDAFRSYFLANKTTGVSVSAFLDQPDELFKESIPARA--------------------------------------------LSALADDKFPASTPLRAVFLFNDDGKAEAVASALQDTTSSWYEDMELYVQDFLSL-DGVQIGAMDGELEKVLYVPAYNTPEWSKAFAKEADAAAGTNSIRLIDGEHAGLPMSHVAAGQTYTVLLSKFPKNLDMTVQLIGSQELKGKNKQTMSPISS-IKTDKDGSASITWKVPADQPLGDYYLKANDKTGLIFGMTPSLEVTAAPKRRLWGP 1029
BLAST of NO08G00380 vs. NCBI_GenBank
Match: EWM20012.1 (hypothetical protein Naga_102319g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 194.9 bits (494), Expect = 9.300e-46 Identity = 123/325 (37.85%), Postives = 177/325 (54.46%), Query Frame = 0
Query: 448 DVAFDPTHVVVAEFLPTTGAEVEEGGLDPEWLRRALQGYFKANGTSGIHVSTFSGMPDDFFTGLADATAPATRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALANAEYPNTHVLKAVFVTSDTAKAQALATALSEKSSEGYQDMDLYVGDYLNAREGVLIQALDGVVLQQFNVPAYASLDFTKAFADEVGSAAGEQSVRLVDSENLGMPLSRAVAGKEYNVELAGFPAGVFLSVSLFG-RDATG-DKQTAALVKRVVTTDKTGGAAFAWTVPRGQAKGDYYLKASDVTGKVFGMSTTFEVDRQAKRRLVGP 771
+V +D HVV+A F PTT A + PE R A + YF AN T+G+ VS F PD+ F A A ALA+ ++P + L+AVF+ +D KA+A+A+AL + +S Y+DM+LYV D+L+ +GV I A+DG + + VPAY + +++KAFA E +AAG S+RL+D E+ G+P+S AG+ Y V L+ FP + ++V L G ++ G +KQT + + + TDK G A+ W VP Q GDYYLKA+D TG +FGM+ + EV KRRL GP
Sbjct: 1 EVEYDAWHVVMATFNPTTPA---GESVAPEDFRDAFRSYFLANKTTGVSVSAFLDQPDELFKESIPARA--------------------------------------------LSALADDKFPASTPLRAVFLFNDDGKAEAVASALQDTTSSWYEDMELYVQDFLSL-DGVQIGAMDGELEKVLYVPAYNTPEWSKAFAKEADAAAGTNSIRLIDGEHAGLPMSHVAAGQTYTVLLSKFPKNLDMTVQLIGSQELNGKNKQTMSPISS-IKTDKDGSASITWKVPADQPLGDYYLKANDKTGLIFGMTPSLEVTAAPKRRLWGP 276 The following BLAST results are available for this feature:
BLAST of NO08G00380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 3
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00380 ID=NO08G00380|Name=NO08G00380|organism=Nannochloropsis oceanica|type=gene|length=2331bpback to top protein sequence of NO08G00380.1 >NO08G00380.1-protein ID=NO08G00380.1-protein|Name=NO08G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=777bpback to top Synonyms
Publications
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