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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr8 | genome | chr8:153913..156243 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO08G00380.1 vs.
Match: EWM26475.1 (hypothetical protein Naga_100045g21 [Nannochloropsis gaditana]) HSP 1 Score: 946.4 bits (2445), Expect = 5.500e-272 Identity = 517/817 (63.28%), Postives = 602/817 (73.68%), Query Frame = 0
Query: 1 MNFMGLGSFATGAGVLVATGVTNEQAYAVMSCFGAGMYNAVGAGVLIESGATFTQFSGPGYMAMTGMAEFVGAGVSSHVGVPATMYGSTVAVHGQGGFSYNGAGVSVWVGCPMAMFWAVYSFLGLGGMVSQGAGIMVWVGNPIFMPMAVSYFAGLGMVMYVGGGSAVIALSPVSMPMALMAFSGPTMPMMTDDVMMPNSTFGGGGH------HGGR--------GRATA---------------------------NGMRMNDDMMMDDDMMMDDMMMMHMAHPANFWIQGNTEATGKGSAFVTGGGMVEGNIKWASHMLDSDPEFNLYEGISNVSSTDRVRGLRKRRLSGAALTDAVSLFDDDADGGSSKLLAVGLDVDNLLDVRAEGIDEKFKSWVPEKLLKAAGDIAALRESPAFIKA-TKDSELNNYLNREPLTLQINNEHLDYCGVCETELVGGKGLDTCDVEDSCAVLQAGAPAGVQAAFDFGDVAFDPTHVVVAEFLPTTGAEVEEGGLDPEWLRRALQGYFKANGTSGIHVSTFSGMPDDFFTGLADATAPATRARRRALRRLRQNREGGEQEDMKTEEDEEEEVRQRKERRRRTSALANAEYPNTHVLKAVFVTSDTAKAQALATALSEKSSEGYQDMDLYVGDYLNAREGVLIQALDGVVLQQFNVPAYASLDFTKAFADEVGSAAGEQSVRLVDSENLGMPLSRAVAGKEYNVELAGFPAGVFLSVSLFGRDATGDKQTAALVKRVVTTDKTGGAAFAWTVPRGQAKGDYYLKASDVTGKVFGMSTTFEVDRQAKRRLVGPWHTVE 776
MNF G GSF TGAGV+V TGVT EQ +AVMS FGA MYNAVGAGVLIESGATF QF+GP YMAMTGM +F+G G SSHVGVP +M GST A+HGQGGFSYNGAG SVWVGCP+AMFWAVYSFLG GG+ +QGAGIM+WVGNP+FMPMAVSYFAGLG +M+VG GSAVIALSPVSMPMA+MAF+GP+MPMM D+ MM GGG H H G G T + M MNDDM M+DDM MDD M M M PANFWIQGN A G+G +VTG N+ S ML S P L + S +R RRLSG+ DA+ LFDD + G SKLLA+GLDVDN LDVR +G+ +KF+SWVPEK +K A D+AAL+ES A A KD + ++ P+ L++ NE LDYCG+CET+LVGGKGL+TC+V DSCA L+ AP G QAAFD GDV+FDPTH+V+AEFLPTTGA VEEG DP LRRALQG+ K NGT+G+ VSTF M D FF GLADATAPATRARR ALR+LR +G E+ED+ + EEE+V+QR+ERRRR S ANA +PNTH L+AVFVT+D AKA+AL +AL++ SSEGYQ MD YVGD+L EGV IQALDG +LQ NVPAYAS+DFTKAFA +VG+AAG QSVRL+D N GMPLSRAV GK+Y VELAGFP FLSV+L+GRD TG+KQTAALVK+V+TTD+ G A FAWTVP Q GDYYLKA D+TGKVFGMST+FEVD++ KRRLVGP HTVE
Sbjct: 475 MNFAGFGSFGTGAGVMVNTGVTMEQVFAVMSSFGASMYNAVGAGVLIESGATFVQFTGPVYMAMTGMMDFLGTGASSHVGVPCSMSGSTGAMHGQGGFSYNGAGSSVWVGCPVAMFWAVYSFLGTGGVAAQGAGIMIWVGNPVFMPMAVSYFAGLGAIMFVGAGSAVIALSPVSMPMAVMAFAGPSMPMMMDNDMMDMPPHGGGNHTMMSVKHMGNHTMGNNTMGNDTMHMNDDMHMNDDMHMNDDMHMNDDMHMNDDMHMNDDMHMNDDMHMDDDMHM-MMMPANFWIQGNIMAMGRGGEYVTGKKKNNHNMTMRSRMLSSKPVLKLPQERGGSKSLEREPDHGVRRLSGSTFMDALDLFDDGDERG-SKLLAIGLDVDNDLDVRKDGMADKFRSWVPEKFIKVAADVAALKESIALRSAGEKDPPRRSKIH--PINLRVENEGLDYCGICETDLVGGKGLNTCNVMDSCADLREQAPEGTQAAFDMGDVSFDPTHMVMAEFLPTTGASVEEGSFDPSMLRRALQGFLKKNGTTGVQVSTFPAMQDKFFMGLADATAPATRARRHALRKLRHEDKGVEEEDV--VKQEEEKVKQRQERRRRRSLFANANFPNTHALRAVFVTTDAAKAEALTSALTDASSEGYQKMDKYVGDFLKTYEGVSIQALDGKLLQNINVPAYASIDFTKAFAQDVGAAAGSQSVRLIDPVNAGMPLSRAVVGKDYEVELAGFPKQTFLSVTLYGRDPTGEKQTAALVKKVLTTDRNGNANFAWTVPVDQTPGDYYLKAGDLTGKVFGMSTSFEVDQKPKRRLVGPSHTVE 1285
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO08G00380.1 ID=NO08G00380.1|Name=NO08G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=2331bp ATGAACTTTATGGGCCTCGGCTCCTTTGCAACGGGCGCGGGGGTCTTGGT GGCCACGGGTGTCACGAACGAACAAGCATATGCCGTTATGTCGTGCTTTG GCGCGGGCATGTACAATGCTGTGGGTGCAGGAGTGTTGATAGAGTCTGGA GCGACCTTTACGCAATTCTCGGGACCGGGCTACATGGCTATGACGGGCAT GGCGGAGTTTGTGGGCGCGGGTGTGTCGTCTCATGTGGGCGTACCTGCTA CCATGTATGGGTCCACTGTGGCCGTACATGGGCAAGGTGGCTTCAGTTAC AACGGTGCGGGCGTCTCAGTGTGGGTTGGATGTCCAATGGCCATGTTCTG GGCGGTTTATTCGTTCTTGGGCTTAGGTGGGATGGTATCACAGGGGGCGG GAATCATGGTATGGGTCGGGAATCCGATTTTCATGCCCATGGCAGTGTCG TACTTTGCTGGGCTGGGGATGGTGATGTATGTAGGAGGGGGGTCTGCAGT GATTGCCTTATCTCCAGTCTCTATGCCAATGGCACTAATGGCCTTCTCAG GGCCGACCATGCCGATGATGACGGACGACGTGATGATGCCGAACTCGACC TTTGGAGGGGGCGGACACCATGGCGGAAGGGGAAGAGCAACAGCCAATGG TATGAGGATGAACGACGACATGATGATGGACGACGACATGATGATGGACG ACATGATGATGATGCACATGGCACATCCCGCCAATTTTTGGATTCAGGGC AACACTGAGGCCACGGGCAAAGGCAGCGCGTTCGTGACGGGAGGGGGGAT GGTGGAGGGAAATATTAAATGGGCGTCACACATGTTAGACTCAGACCCCG AGTTCAATTTGTACGAGGGGATAAGTAACGTGAGCAGCACTGATCGTGTC CGGGGACTGCGGAAGCGACGCTTGTCCGGCGCGGCTCTCACGGACGCCGT AAGTCTCTTTGACGACGACGCGGATGGGGGCTCGTCAAAGCTTCTGGCCG TTGGTCTGGATGTGGACAATTTGCTTGACGTAAGGGCTGAGGGCATAGAC GAGAAGTTTAAGAGCTGGGTGCCGGAGAAACTGTTGAAGGCTGCGGGAGA CATTGCGGCGCTACGCGAGAGTCCGGCCTTTATCAAGGCCACCAAAGACT CGGAGCTGAACAACTACCTGAACAGGGAACCTCTCACTCTTCAGATCAAT AATGAACATCTCGATTACTGCGGGGTGTGCGAGACGGAGCTCGTGGGCGG CAAGGGCCTCGACACCTGTGACGTTGAGGACTCATGTGCGGTCCTTCAGG CTGGGGCCCCAGCGGGCGTGCAAGCAGCCTTTGACTTTGGCGATGTCGCA TTTGACCCCACCCATGTTGTGGTAGCCGAGTTTTTGCCCACTACGGGCGC GGAGGTGGAAGAGGGAGGACTGGACCCTGAATGGCTCCGTCGGGCGTTAC AGGGCTATTTCAAGGCAAATGGGACATCGGGCATCCATGTCTCGACATTT TCCGGAATGCCCGATGACTTTTTCACCGGCTTGGCGGATGCTACGGCCCC CGCGACAAGGGCGCGACGGCGTGCTTTGCGCCGATTGCGGCAGAACCGGG AGGGGGGAGAGCAAGAGGACATGAAAACGGAGGAGGACGAGGAGGAGGAA GTCAGGCAACGAAAGGAGCGCCGGCGCCGAACGTCTGCACTGGCCAACGC AGAGTACCCCAACACACACGTGCTTAAGGCTGTGTTTGTGACGTCTGATA CGGCGAAGGCACAGGCGTTGGCAACTGCCCTGAGCGAAAAGTCCTCGGAG GGTTACCAAGACATGGATCTGTATGTAGGCGACTACCTCAATGCGCGCGA AGGAGTCCTCATCCAAGCACTAGACGGCGTGGTGCTCCAGCAGTTCAACG TTCCGGCGTATGCGAGCCTAGATTTCACCAAAGCATTTGCCGATGAGGTG GGCTCAGCAGCAGGGGAACAGTCCGTCCGGTTGGTAGATTCGGAGAATCT GGGCATGCCCTTGTCGCGCGCGGTAGCGGGGAAGGAGTATAATGTGGAGC TTGCTGGTTTCCCCGCAGGAGTCTTCTTGTCAGTCTCTCTCTTCGGGCGA GACGCGACGGGGGACAAGCAAACGGCGGCTCTGGTAAAACGTGTAGTTAC CACCGATAAGACAGGTGGAGCGGCATTTGCATGGACGGTGCCTAGGGGGC AGGCAAAAGGAGATTATTACTTAAAGGCAAGCGATGTTACTGGGAAAGTG TTTGGCATGTCGACGACGTTTGAGGTGGACCGGCAAGCAAAGCGTCGTTT GGTGGGACCATGGCATACGGTCGAGGTTTAA back to topprotein sequence of NO08G00380.1 >NO08G00380.1-protein ID=NO08G00380.1-protein|Name=NO08G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=777bp MNFMGLGSFATGAGVLVATGVTNEQAYAVMSCFGAGMYNAVGAGVLIESG ATFTQFSGPGYMAMTGMAEFVGAGVSSHVGVPATMYGSTVAVHGQGGFSY NGAGVSVWVGCPMAMFWAVYSFLGLGGMVSQGAGIMVWVGNPIFMPMAVS YFAGLGMVMYVGGGSAVIALSPVSMPMALMAFSGPTMPMMTDDVMMPNST FGGGGHHGGRGRATANGMRMNDDMMMDDDMMMDDMMMMHMAHPANFWIQG NTEATGKGSAFVTGGGMVEGNIKWASHMLDSDPEFNLYEGISNVSSTDRV RGLRKRRLSGAALTDAVSLFDDDADGGSSKLLAVGLDVDNLLDVRAEGID EKFKSWVPEKLLKAAGDIAALRESPAFIKATKDSELNNYLNREPLTLQIN NEHLDYCGVCETELVGGKGLDTCDVEDSCAVLQAGAPAGVQAAFDFGDVA FDPTHVVVAEFLPTTGAEVEEGGLDPEWLRRALQGYFKANGTSGIHVSTF SGMPDDFFTGLADATAPATRARRRALRRLRQNREGGEQEDMKTEEDEEEE VRQRKERRRRTSALANAEYPNTHVLKAVFVTSDTAKAQALATALSEKSSE GYQDMDLYVGDYLNAREGVLIQALDGVVLQQFNVPAYASLDFTKAFADEV GSAAGEQSVRLVDSENLGMPLSRAVAGKEYNVELAGFPAGVFLSVSLFGR DATGDKQTAALVKRVVTTDKTGGAAFAWTVPRGQAKGDYYLKASDVTGKV FGMSTTFEVDRQAKRRLVGPWHTVEV* back to topmRNA from alignment at chr8:153913..156243- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO08G00380.1 ID=NO08G00380.1|Name=NO08G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=2331bp|location=Sequence derived from alignment at chr8:153913..156243- (Nannochloropsis oceanica) ATGAACTTTATGGGCCTCGGCTCCTTTGCAACGGGCGCGGGGGTCTTGGT
GGCCACGGGTGTCACGAACGAACAAGCATATGCCGTTATGTCGTGCTTTG
GCGCGGGCATGTACAATGCTGTGGGTGCAGGAGTGTTGATAGAGTCTGGA
GCGACCTTTACGCAATTCTCGGGACCGGGCTACATGGCTATGACGGGCAT
GGCGGAGTTTGTGGGCGCGGGTGTGTCGTCTCATGTGGGCGTACCTGCTA
CCATGTATGGGTCCACTGTGGCCGTACATGGGCAAGGTGGCTTCAGTTAC
AACGGTGCGGGCGTCTCAGTGTGGGTTGGATGTCCAATGGCCATGTTCTG
GGCGGTTTATTCGTTCTTGGGCTTAGGTGGGATGGTATCACAGGGGGCGG
GAATCATGGTATGGGTCGGGAATCCGATTTTCATGCCCATGGCAGTGTCG
TACTTTGCTGGGCTGGGGATGGTGATGTATGTAGGAGGGGGGTCTGCAGT
GATTGCCTTATCTCCAGTCTCTATGCCAATGGCACTAATGGCCTTCTCAG
GGCCGACCATGCCGATGATGACGGACGACGTGATGATGCCGAACTCGACC
TTTGGAGGGGGCGGACACCATGGCGGAAGGGGAAGAGCAACAGCCAATGG
TATGAGGATGAACGACGACATGATGATGGACGACGACATGATGATGGACG
ACATGATGATGATGCACATGGCACATCCCGCCAATTTTTGGATTCAGGGC
AACACTGAGGCCACGGGCAAAGGCAGCGCGTTCGTGACGGGAGGGGGGAT
GGTGGAGGGAAATATTAAATGGGCGTCACACATGTTAGACTCAGACCCCG
AGTTCAATTTGTACGAGGGGATAAGTAACGTGAGCAGCACTGATCGTGTC
CGGGGACTGCGGAAGCGACGCTTGTCCGGCGCGGCTCTCACGGACGCCGT
AAGTCTCTTTGACGACGACGCGGATGGGGGCTCGTCAAAGCTTCTGGCCG
TTGGTCTGGATGTGGACAATTTGCTTGACGTAAGGGCTGAGGGCATAGAC
GAGAAGTTTAAGAGCTGGGTGCCGGAGAAACTGTTGAAGGCTGCGGGAGA
CATTGCGGCGCTACGCGAGAGTCCGGCCTTTATCAAGGCCACCAAAGACT
CGGAGCTGAACAACTACCTGAACAGGGAACCTCTCACTCTTCAGATCAAT
AATGAACATCTCGATTACTGCGGGGTGTGCGAGACGGAGCTCGTGGGCGG
CAAGGGCCTCGACACCTGTGACGTTGAGGACTCATGTGCGGTCCTTCAGG
CTGGGGCCCCAGCGGGCGTGCAAGCAGCCTTTGACTTTGGCGATGTCGCA
TTTGACCCCACCCATGTTGTGGTAGCCGAGTTTTTGCCCACTACGGGCGC
GGAGGTGGAAGAGGGAGGACTGGACCCTGAATGGCTCCGTCGGGCGTTAC
AGGGCTATTTCAAGGCAAATGGGACATCGGGCATCCATGTCTCGACATTT
TCCGGAATGCCCGATGACTTTTTCACCGGCTTGGCGGATGCTACGGCCCC
CGCGACAAGGGCGCGACGGCGTGCTTTGCGCCGATTGCGGCAGAACCGGG
AGGGGGGAGAGCAAGAGGACATGAAAACGGAGGAGGACGAGGAGGAGGAA
GTCAGGCAACGAAAGGAGCGCCGGCGCCGAACGTCTGCACTGGCCAACGC
AGAGTACCCCAACACACACGTGCTTAAGGCTGTGTTTGTGACGTCTGATA
CGGCGAAGGCACAGGCGTTGGCAACTGCCCTGAGCGAAAAGTCCTCGGAG
GGTTACCAAGACATGGATCTGTATGTAGGCGACTACCTCAATGCGCGCGA
AGGAGTCCTCATCCAAGCACTAGACGGCGTGGTGCTCCAGCAGTTCAACG
TTCCGGCGTATGCGAGCCTAGATTTCACCAAAGCATTTGCCGATGAGGTG
GGCTCAGCAGCAGGGGAACAGTCCGTCCGGTTGGTAGATTCGGAGAATCT
GGGCATGCCCTTGTCGCGCGCGGTAGCGGGGAAGGAGTATAATGTGGAGC
TTGCTGGTTTCCCCGCAGGAGTCTTCTTGTCAGTCTCTCTCTTCGGGCGA
GACGCGACGGGGGACAAGCAAACGGCGGCTCTGGTAAAACGTGTAGTTAC
CACCGATAAGACAGGTGGAGCGGCATTTGCATGGACGGTGCCTAGGGGGC
AGGCAAAAGGAGATTATTACTTAAAGGCAAGCGATGTTACTGGGAAAGTG
TTTGGCATGTCGACGACGTTTGAGGTGGACCGGCAAGCAAAGCGTCGTTT
GGTGGGACCATGGCATACGGTCGAGGTTTAA back to topCoding sequence (CDS) from alignment at chr8:153913..156243- >NO08G00380.1 ID=NO08G00380.1|Name=NO08G00380.1|organism=Nannochloropsis oceanica|type=CDS|length=2331bp|location=Sequence derived from alignment at chr8:153913..156243- (Nannochloropsis oceanica) ATGAACTTTATGGGCCTCGGCTCCTTTGCAACGGGCGCGGGGGTCTTGGT GGCCACGGGTGTCACGAACGAACAAGCATATGCCGTTATGTCGTGCTTTG GCGCGGGCATGTACAATGCTGTGGGTGCAGGAGTGTTGATAGAGTCTGGA GCGACCTTTACGCAATTCTCGGGACCGGGCTACATGGCTATGACGGGCAT GGCGGAGTTTGTGGGCGCGGGTGTGTCGTCTCATGTGGGCGTACCTGCTA CCATGTATGGGTCCACTGTGGCCGTACATGGGCAAGGTGGCTTCAGTTAC AACGGTGCGGGCGTCTCAGTGTGGGTTGGATGTCCAATGGCCATGTTCTG GGCGGTTTATTCGTTCTTGGGCTTAGGTGGGATGGTATCACAGGGGGCGG GAATCATGGTATGGGTCGGGAATCCGATTTTCATGCCCATGGCAGTGTCG TACTTTGCTGGGCTGGGGATGGTGATGTATGTAGGAGGGGGGTCTGCAGT GATTGCCTTATCTCCAGTCTCTATGCCAATGGCACTAATGGCCTTCTCAG GGCCGACCATGCCGATGATGACGGACGACGTGATGATGCCGAACTCGACC TTTGGAGGGGGCGGACACCATGGCGGAAGGGGAAGAGCAACAGCCAATGG TATGAGGATGAACGACGACATGATGATGGACGACGACATGATGATGGACG ACATGATGATGATGCACATGGCACATCCCGCCAATTTTTGGATTCAGGGC AACACTGAGGCCACGGGCAAAGGCAGCGCGTTCGTGACGGGAGGGGGGAT GGTGGAGGGAAATATTAAATGGGCGTCACACATGTTAGACTCAGACCCCG AGTTCAATTTGTACGAGGGGATAAGTAACGTGAGCAGCACTGATCGTGTC CGGGGACTGCGGAAGCGACGCTTGTCCGGCGCGGCTCTCACGGACGCCGT AAGTCTCTTTGACGACGACGCGGATGGGGGCTCGTCAAAGCTTCTGGCCG TTGGTCTGGATGTGGACAATTTGCTTGACGTAAGGGCTGAGGGCATAGAC GAGAAGTTTAAGAGCTGGGTGCCGGAGAAACTGTTGAAGGCTGCGGGAGA CATTGCGGCGCTACGCGAGAGTCCGGCCTTTATCAAGGCCACCAAAGACT CGGAGCTGAACAACTACCTGAACAGGGAACCTCTCACTCTTCAGATCAAT AATGAACATCTCGATTACTGCGGGGTGTGCGAGACGGAGCTCGTGGGCGG CAAGGGCCTCGACACCTGTGACGTTGAGGACTCATGTGCGGTCCTTCAGG CTGGGGCCCCAGCGGGCGTGCAAGCAGCCTTTGACTTTGGCGATGTCGCA TTTGACCCCACCCATGTTGTGGTAGCCGAGTTTTTGCCCACTACGGGCGC GGAGGTGGAAGAGGGAGGACTGGACCCTGAATGGCTCCGTCGGGCGTTAC AGGGCTATTTCAAGGCAAATGGGACATCGGGCATCCATGTCTCGACATTT TCCGGAATGCCCGATGACTTTTTCACCGGCTTGGCGGATGCTACGGCCCC CGCGACAAGGGCGCGACGGCGTGCTTTGCGCCGATTGCGGCAGAACCGGG AGGGGGGAGAGCAAGAGGACATGAAAACGGAGGAGGACGAGGAGGAGGAA GTCAGGCAACGAAAGGAGCGCCGGCGCCGAACGTCTGCACTGGCCAACGC AGAGTACCCCAACACACACGTGCTTAAGGCTGTGTTTGTGACGTCTGATA CGGCGAAGGCACAGGCGTTGGCAACTGCCCTGAGCGAAAAGTCCTCGGAG GGTTACCAAGACATGGATCTGTATGTAGGCGACTACCTCAATGCGCGCGA AGGAGTCCTCATCCAAGCACTAGACGGCGTGGTGCTCCAGCAGTTCAACG TTCCGGCGTATGCGAGCCTAGATTTCACCAAAGCATTTGCCGATGAGGTG GGCTCAGCAGCAGGGGAACAGTCCGTCCGGTTGGTAGATTCGGAGAATCT GGGCATGCCCTTGTCGCGCGCGGTAGCGGGGAAGGAGTATAATGTGGAGC TTGCTGGTTTCCCCGCAGGAGTCTTCTTGTCAGTCTCTCTCTTCGGGCGA GACGCGACGGGGGACAAGCAAACGGCGGCTCTGGTAAAACGTGTAGTTAC CACCGATAAGACAGGTGGAGCGGCATTTGCATGGACGGTGCCTAGGGGGC AGGCAAAAGGAGATTATTACTTAAAGGCAAGCGATGTTACTGGGAAAGTG TTTGGCATGTCGACGACGTTTGAGGTGGACCGGCAAGCAAAGCGTCGTTT GGTGGGACCATGGCATACGGTCGAGGTTTAA back to top
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