Naga_100045g21, gene4044 (gene) Nannochloropsis gaditana

Overview
NameNaga_100045g21
Unique Namegene4044
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1100848..1105594 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100045g21
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1100848..1105594 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL142ngnoL142Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL138ngnoL138Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00380NO08G00380Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4200rna4200-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4200rna4200Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4200

>rna4200-protein ID=rna4200-protein|Name=rna4200|organism=Nannochloropsis gaditana|type=polypeptide|length=1286bp
MVAANAPIVEPQNGGRNRVRRYVLGGFLLAAVVGGILALVFTVGRKPEKT
TGVAGSVTSSLSDGDTTLSDVLASIKAAGDVSGSSSGSSMNVSPLTPDLE
AALQAAIAKNSVGDPLQIGNAVENGDLTLEGVKKKSGMGDMDMGGMDMGD
MDMGDMDMGDMDMGDMDMGDMDMGDMDMGDMGMGMGNSPRNATDLSKFVG
KDTCWPRNIVELQIAVEEADCPLVVLTNPNPMAYMLMDMNEIMVMRHVRV
LGHPALLPTIDAMMGMRAFTIMEGGFLELQYVRVRQGMGMYRDRYGLEGR
DDISSKVFEIKGGSVMLEEGAEGANFVGVIFLAVMTNQEMTEQAIQDQID
MTGWRIYGGHVYVTAGTVRFFNCHFWDSMILMPFTDQVAIGADILVLAGN
VFVTGCTFTNTMLFSNYGGAGWNIVTLGGNTVMTWCTIQWQAIIMSMFVA
GMVVFTGGGTLIMTGVDFRFVSAGMNFAGFGSFGTGAGVMVNTGVTMEQV
FAVMSSFGASMYNAVGAGVLIESGATFVQFTGPVYMAMTGMMDFLGTGAS
SHVGVPCSMSGSTGAMHGQGGFSYNGAGSSVWVGCPVAMFWAVYSFLGTG
GVAAQGAGIMIWVGNPVFMPMAVSYFAGLGAIMFVGAGSAVIALSPVSMP
MAVMAFAGPSMPMMMDNDMMDMPPHGGGNHTMMSVKHMGNHTMGNNTMGN
DTMHMNDDMHMNDDMHMNDDMHMNDDMHMNDDMHMNDDMHMNDDMHMDDD
MHMMMMPANFWIQGNIMAMGRGGEYVTGKKKNNHNMTMRSRMLSSKPVLK
LPQERGGSKSLEREPDHGVRRLSGSTFMDALDLFDDGDERGSKLLAIGLD
VDNDLDVRKDGMADKFRSWVPEKFIKVAADVAALKESIALRSAGEKDPPR
RSKIHPINLRVENEGLDYCGICETDLVGGKGLNTCNVMDSCADLREQAPE
GTQAAFDMGDVSFDPTHMVMAEFLPTTGASVEEGSFDPSMLRRALQGFLK
KNGTTGVQVSTFPAMQDKFFMGLADATAPATRARRHALRKLRHEDKGVEE
EDVVKQEEEKVKQRQERRRRRSLFANANFPNTHALRAVFVTTDAAKAEAL
TSALTDASSEGYQKMDKYVGDFLKTYEGVSIQALDGKLLQNINVPAYASI
DFTKAFAQDVGAAAGSQSVRLIDPVNAGMPLSRAVVGKDYEVELAGFPKQ
TFLSVTLYGRDPTGEKQTAALVKKVLTTDRNGNANFAWTVPVDQTPGDYY
LKAGDLTGKVFGMSTSFEVDQKPKRRLVGPSHTVEF
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Synonyms
Publications