NO07G03090, NO07G03090 (gene) Nannochloropsis oceanica

Overview
NameNO07G03090
Unique NameNO07G03090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3024
Alignment locationchr7:861644..864667 -

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Properties
Property NameValue
DescriptionLight harvesting complex protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:861644..864667 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO07G03090 vs. NCBI_GenBank
Match: EWM27048.1 (hypothetical protein Naga_100056g41 [Nannochloropsis gaditana])

HSP 1 Score: 383.6 bits (984), Expect = 8.500e-103
Identity = 212/412 (51.46%), Postives = 276/412 (66.99%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRSTTSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPLVTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFSCFTLAPEIRFSSLSAFGAVWKAGKVPNKA---GQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGL----AGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDVPSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAVQIKDDKAAAALASAREKL 470
            MEKF KWADKGTGINPFLP R   SS  +K    +L++ L+AVRLPL+ +T +W   +SLLT PWFDILTG+L     Y++  P+     + +P+ T   LL LG    L  P+ R+FS L LRP +  +L  +G+S+ EQHANLRKLGLRPPGH+P  +R+G TIQ GD+LLSNHTS L++L+F SR LP FS   +AP  +   L+   A W+AG VP KA   G G  L  + AEAKR+ +++VVFPE  RSNG+G+L F +GVLDG     A  G+         V VH+FGFSA KG+++ THTVGS   F+ ++L R RTTV+V+YV A D+   P S  + G+  +S TP   SEE+R LLA MLGRPKL LGY+DF +F KYYAA++  D++ AAALA AREK+
Sbjct:    1 MEKFTKWADKGTGINPFLPQRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPM--TLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQPTS--AKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARAREKM 408          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: XP_005852499.1 (light harvesting complex protein, partial [Nannochloropsis gaditana CCMP526] >EKU23332.1 light harvesting complex protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 347.1 bits (889), Expect = 8.800e-92
Identity = 201/409 (49.14%), Postives = 259/409 (63.33%), Query Frame = 0
Query:   64 SMEKFAKWADKGTGINPFLPPRSTTSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPLVTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFSCFTLAPEIRFSSLSAFGAVWKAGKVPNKA---GQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGL----AGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDVPSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAVQIKDDKAAAALASA 466
            SMEKF KWADKGTGINPFLP R   SS  +K    +L++ L+AVRLPL+ +T +W   +SLLT PWFDILTG+L     Y++  P+     + +P+ T   LL LG    L  P+ R+FS L LRP +  +L  +G+S+ EQHANLRKLGLRPPGH+P  +R+G TIQ GD+LLSNHTS L++L+F SR LP FS   +AP  +   L+   A W+AG VP KA   G G  L  + AEAKR+ +++VVFPE  RSNG+G+L F +GVLDG     A  G+         V VH+FGF     DLL+                R RTTV+V+YV A D+   P S  + G+  +S TP   SEE+R LLA MLGRPKL LGY+DF +F KYYAA++  D++ AAALA A
Sbjct:   34 SMEKFTKWADKGTGINPFLPQRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPM--TLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFRCDLADLLS----------------RWRTTVNVSYVGAPDLLLQPTS--AKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARA 422          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: CBN78524.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 170.2 bits (430), Expect = 1.500e-38
Identity = 148/433 (34.18%), Postives = 203/433 (46.88%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLP-PRSTTSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSL--LLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPL-HRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPLVTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFSCFTL---APEIRFSSLSAFGAVWKAGKVPNKAG---QGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFS---------AVKGDLLATHTVGSSLRFFFRILCR-PRTTVHVTYVCARDVPSYPG---SRCSSG------NKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAVQIKDDKAAAALASAREK 469
            MEKF+KWAD+ +G+NPF+P P  +  S        +L L L  VR+P+         L  L+T      L+  L  L+A      A N       + +Q   T   L + L +       +F + L+R  L   L  MGI   E+HA+LR+LGLR P  +P   R G  I  GD+++ N    L++LY  SR  P F+       +  +  + +    AV  + + P  AG   +  TL  ++   +   RS+VV PE  R+NG G+L   + V D LA               VHL  FS           +G       VGS+LR  F +  +  RTT+ V++V A DVP +P    SR SS         S   TPA W+EEIR L+A M+GRPKL LG  DF TF  YY  V   D   AAALA +R K
Sbjct:    1 MEKFSKWADRSSGVNPFVPFPPRSPKSLCLLVPVYLLRLCLALVRMPVA--------LSLLMTASVGGALSRYLPVLMAFWAAERAMN-----GFSSDQVWSTRFLLAIPLLVFAQFGASVFRVFLVRIPLRLALSVMGIKLEEKHADLRRLGLRSPAAEPPSGRPGGGIYRGDIIVRNSCCFLEVLYLQSRVTPQFTAIAAGGGSAPVNLTRIRFVSAVLGSFRGPPAAGALKKEQTLRDIVTAPRGRTRSIVVAPEAARTNGAGVLQLSR-VFDSLAHPPSGDTSGYVAQPAVHLVTFSYNRGGRGDGGGRGGFSPAQPVGSALRQLFWLCSQLSRTTMEVSWVAAADVPRFPMRAISRISSDPSRKFPGPSQLQTPAAWTEEIRSLMAAMIGRPKLALGSKDFATFVAYYDLVSKGDKAGAAALADSRSK 419          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: XP_009836919.1 (hypothetical protein H257_11618 [Aphanomyces astaci] >ETV73493.1 hypothetical protein H257_11618 [Aphanomyces astaci])

HSP 1 Score: 105.9 bits (263), Expect = 3.400e-19
Identity = 117/408 (28.68%), Postives = 174/408 (42.65%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRSTTSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACY--VNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPLVTRVGATIQPGDLLLSNHTSALDILYFASRSLP--LFSCFTLAPEIRFSSLSAFGAVWKAGKVP-NKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSS-LRFFFRILCRPRTTVHVTYVCARDVPSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAVQIKDDKAAAALASAR 467
            MEK+++W+D  TGINPF+PP     + A      V   G+LA+          W+ L        F ++ G +LL+A +  ++H P L                           +HR    ++L   L  V+ T+ I   ++ AN R+LGL  PG KP        I+ GD++++NH+S LDILYF  R  P  +F C + A +    +    GA  +A   P     + V L  VL   +R    +VVFPE  RSNG+ +L F   +LD L                VHL         +  THT GS+    F R+L     TV +T + +  VP                     S++++ LLA ML    + L   DF +F  Y+A V     + A+A  S +
Sbjct:    1 MEKYSRWSDLTTGINPFVPPPHQLPANAILRWTQVFFGGILALL--------RWILL--------FPLVLGLVLLSAVHTILDHVPFLGR------------------------VIHRATDWIVL--GLILVVTTIFIK--DEAANARRLGLLTPGTKPPAL---GGIKAGDVIVANHSSVLDILYFGFRYSPVFVFPCASDASKNLVQTFGLLGAFAQAMAPPLTSLTRPVKLQDVL---RRTSSPVVVFPEGTRSNGKAVLTF-LPILDSL-----------PPPTRVHLVAIRYESKAISPTHTCGSAGWHLFCRVLSHAYHTVKITTLASEFVPK-----------------GSTSQQLQALLASMLRTKAVHLTCADFASFNAYWAHVNGGGRQPASAFTSRK 329          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: XP_008876463.1 (hypothetical protein H310_11529 [Aphanomyces invadans] >ETV94872.1 hypothetical protein H310_11529 [Aphanomyces invadans])

HSP 1 Score: 97.1 bits (240), Expect = 1.600e-16
Identity = 108/390 (27.69%), Postives = 165/390 (42.31%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRSTTSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPLVTRVGATIQPGDLLLSNHTSALDILYFASRSLP--LFSCFTLAPEIRFSSLSAFGAVWKAGKVP-NKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDVPSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAV 452
            MEK+++W+D  TGINPF+PP              +   G+L+     LC    W+ LV LL           +LL                       + + ++   L  +P L R+F        L  +L    +   ++ AN ++LGL  PG KP      + IQ GD++++NHTS  D+LY   R  P  +F C + A +    S    GA+ +A   P       + L  V+ +A      +V+FPE  RSNG+ +L+F   VLD L             S  +HL         +  THT GS++    R+      T+ VT        + P    + G     STP    ++++ LLA ML    + L  DDF++F  Y+A V
Sbjct:    1 MEKYSRWSDLTTGINPFVPPPHQLPKNVVLRWTQLFLGGILS-----LC---RWIVLVPLL-----------MLL-----------------------VVVTSIHAVLDYVPILGRIFHRWTDSIVLGLILIVTTVFIKDEAANAKRLGLLAPGTKPPTL---SGIQAGDVIVTNHTSVFDVLYLGFRYSPTFVFPCASDASKGVVQSFGLLGAIAQALAPPLATVSNPLKLQDVIRQAS---GPVVIFPEGTRSNGKAVLSF-LPVLDALPS-----------STRIHLVAIRYEYKAIAPTHTCGSAVWHLCRLFSHVYHTIKVT--------TLPCELVAKG-----STP----QQLQALLASMLRTKGVELSCDDFISFNAYWAHV 313          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: ETL84336.1 (hypothetical protein L917_15802 [Phytophthora parasitica])

HSP 1 Score: 96.3 bits (238), Expect = 2.700e-16
Identity = 111/400 (27.75%), Postives = 171/400 (42.75%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRST-TSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPL--VTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFSCFTLAPEIRFSSLSAFG---AVWKAGKVPNKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDV-------PSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAV 452
            MEK+++W+D  TGINPF+P R   TS        +V    L  VR PL+ ++   LFLV+++                                     +++LA+   LG L  L R+   LL     + +L   G+   E+ AN R+LGL     +     TRVG+    GD+L+ N+TS L+ILY A R  P+F   T +       +   G   A++++  +P  A +     K+    +R    +VV PE  RSNG+ +L F   VL  L                VHL GF         + + G +    F        T+ VT + A+D+          P S+ S   +++ +      E++R LLA ML    + LG +DFV+F  Y+  V
Sbjct:    1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLVSFVALFLVNIV-------------------------------------VSILAVIPFLGRL--LKRITQWLL----CSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVGS----GDVLVCNYTSFLEILYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKITDVVRRAAGPVVVLPEGARSNGKAVLRFIP-VLQNL-----------PVKTRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVTVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHV 341          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: XP_008911788.1 (hypothetical protein PPTG_15791 [Phytophthora parasitica INRA-310] >ETI37419.1 hypothetical protein F443_16579 [Phytophthora parasitica P1569] >ETM37512.1 hypothetical protein L914_15932 [Phytophthora parasitica] >ETN02831.1 hypothetical protein PPTG_15791 [Phytophthora parasitica INRA-310])

HSP 1 Score: 94.4 bits (233), Expect = 1.000e-15
Identity = 110/400 (27.50%), Postives = 170/400 (42.50%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRST-TSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPL--VTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFSCFTLAPEIRFSSLSAFG---AVWKAGKVPNKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDV-------PSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAV 452
            MEK+++W+D  TGINPF+P R   TS        +V    L  VR PL+ ++   LFLV+++                                     +++LA+   LG L  L R+   LL     + +L   G+   E+ AN R+LGL     +     TRVG+    GD+L+ N+TS L+ILY A R  P+F   T +       +   G   A++++  +P  A +     K+    +R    +VV PE  RSNG+ +L F   VL  L                VHL GF         + + G +    F        T+ V  + A+D+          P S+ S   +++ +      E++R LLA ML    + LG +DFV+F  Y+  V
Sbjct:    1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLVSFVALFLVNIV-------------------------------------VSILAVIPFLGRL--LKRITQWLL----CSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVGS----GDVLVCNYTSFLEILYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKITDVVRRAAGPVVVLPEGARSNGKAVLRFIP-VLQNL-----------PIKTRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVAVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHV 341          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: ETP35349.1 (hypothetical protein F442_16420 [Phytophthora parasitica P10297])

HSP 1 Score: 94.4 bits (233), Expect = 1.000e-15
Identity = 110/400 (27.50%), Postives = 170/400 (42.50%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRST-TSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPL--VTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFSCFTLAPEIRFSSLSAFG---AVWKAGKVPNKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDV-------PSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAV 452
            MEK+++W+D  TGINPF+P R   TS        +V    L  VR PL+ ++   LFLV+++                                     +++LA+   LG L  L R+   LL     + +L   G+   E+ AN R+LGL     +     TRVG+    GD+L+ N+TS L+ILY A R  P+F   T +       +   G   A++++  +P  A +     K+    +R    +VV PE  RSNG+ +L F   VL  L                VHL GF         + + G +    F        T+ V  + A+D+          P S+ S   +++ +      E++R LLA ML    + LG +DFV+F  Y+  V
Sbjct:    1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLVSFVALFLVTIV-------------------------------------VSILAVIPFLGRL--LKRITQWLL----CSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVGS----GDVLVCNYTSFLEILYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKITDVVRRAAGPVVVLPEGARSNGKAVLRFIP-VLQNL-----------PIKTRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVAVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHV 341          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: ETL31083.1 (hypothetical protein L916_16006 [Phytophthora parasitica])

HSP 1 Score: 94.0 bits (232), Expect = 1.300e-15
Identity = 110/400 (27.50%), Postives = 170/400 (42.50%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRST-TSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPL--VTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFSCFTLAPEIRFSSLSAFG---AVWKAGKVPNKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDV-------PSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAV 452
            MEK+++W+D  TGINPF+P R   TS        +V    L  VR PL+ ++   LFLV+++                                     +++LA+   LG L  L R+   LL     + +L   G+   E+ AN R+LGL     +     TRVG+    GD+L+ N+TS L+ILY A R  P+F   T +       +   G   A++++  +P  A +     K+    +R    +VV PE  RSNG+ +L F   VL  L                VHL GF         + + G +    F        T+ V  + A+D+          P S+ S   +++ +      E++R LLA ML    + LG +DFV+F  Y+  V
Sbjct:    1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLLSFVALFLVNIV-------------------------------------VSILAVIPFLGRL--LKRITQWLL----CSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVGS----GDVLVCNYTSFLEILYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKIADVVRRAAGPVVVLPEGARSNGKAVLRFIP-VLQNL-----------PVKTRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVAVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHV 341          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: ETK77638.1 (hypothetical protein L915_16110 [Phytophthora parasitica] >ETO66192.1 hypothetical protein F444_16554 [Phytophthora parasitica P1976])

HSP 1 Score: 93.2 bits (230), Expect = 2.300e-15
Identity = 109/400 (27.25%), Postives = 170/400 (42.50%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRST-TSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPL--VTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFSCFTLAPEIRFSSLSAFG---AVWKAGKVPNKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDV-------PSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAV 452
            MEK+++W+D  TGINPF+P R   TS        +V    L  VR PL+ ++   LFLV+++                                     +++LA+   LG L  L R+   LL     + +L   G+   E+ AN R+LGL     +     TRVG+    GD+L+ N+TS L+I+Y A R  P+F   T +       +   G   A++++  +P  A +     K+    +R    +VV PE  RSNG+ +L F   VL  L                VHL GF         + + G +    F        T+ V  + A+D+          P S+ S   +++ +      E++R LLA ML    + LG +DFV+F  Y+  V
Sbjct:    1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLLSFVALFLVNIV-------------------------------------VSILAVIPFLGRL--LKRITQWLL----CSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVGS----GDVLVCNYTSFLEIMYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKITDVVRRAAGPVVVLPEGARSNGKAVLRFIP-VLQNL-----------PIKTRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVAVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHV 341          
The following BLAST results are available for this feature:
BLAST of NO07G03090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27048.18.500e-10351.46hypothetical protein Naga_100056g41 [Nannochlorops... [more]
XP_005852499.18.800e-9249.14light harvesting complex protein, partial [Nannoch... [more]
CBN78524.11.500e-3834.18conserved unknown protein [Ectocarpus siliculosus][more]
XP_009836919.13.400e-1928.68hypothetical protein H257_11618 [Aphanomyces astac... [more]
XP_008876463.11.600e-1627.69hypothetical protein H310_11529 [Aphanomyces invad... [more]
ETL84336.12.700e-1627.75hypothetical protein L917_15802 [Phytophthora para... [more]
XP_008911788.11.000e-1527.50hypothetical protein PPTG_15791 [Phytophthora para... [more]
ETP35349.11.000e-1527.50hypothetical protein F442_16420 [Phytophthora para... [more]
ETL31083.11.300e-1527.50hypothetical protein L916_16006 [Phytophthora para... [more]
ETK77638.12.300e-1527.25hypothetical protein L915_16110 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000550NSK000550Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03090.3NO07G03090.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G03090.2NO07G03090.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G03090.1NO07G03090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581026gene_2641Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100056g41gene3484Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03090.3NO07G03090.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G03090.2NO07G03090.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G03090.1NO07G03090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03090 ID=NO07G03090|Name=NO07G03090|organism=Nannochloropsis oceanica|type=gene|length=3024bp
TTCATTTGTTGCATTCTTTTCATTCATTCATCCCATTTATTTAATTTATT
TCCCTCGTGGGGGCGTTATCCACAACACCACATGGTTACACGCACTCGCC
ACCTGCTCGTAGACCGGGTTACACTTCACCTGCCTCACAGGGCCTGTATG
CCCACTCAATCGACACACCACCCCGTCCATTACCCTCTCCTCCGTCGCAT
CAAACACACATACCTCCCCCTCCTCCGAGCCCGTCAAAATGTGGTTCACA
TCCGAGGTATAACAAGCTGTGATATTCAATCCCTTCTCATTCTTATAGCC
GGTCAGAAACCTCGTCACTTGCAAATCGTAAGTGTCAATCACAAGCGTCA
TCCCTCCCTTGGTCGACACCAGTAAATTCTTCCCGTCCGCGCTAAAGCTC
ATGTCAATCCACGGAGCCTGTACCAACTTACGAGCCACCTCAGGGTCAAT
CGTTGGTTGTTGTGCAAGCAACGTCTGTCGTAACTCATTCTCAGAGATCC
CGAAATTTTCAAAAGCCCCTTCACTGAACTTCCTCGCGTCATACAATTTC
AACAAATGTCTGTCTTGCACCTGCGCGCACACTGCAAAAACCAACCCCGA
CGGGTCAAACTCCGCTAAAACAGGACAAGGACTACTGCTGCTGTTGCTGT
AGCTTCCCCCACCACCTATCTGAATGTTGCCCTGGCCCAAGCACTTGGGT
TGCTGCAATGTCCATATCCGAACGGTACCATCAACCGATGCGCTCATAAA
TCGATCGTCTGTGTAAGACATGGCCAACGCTGTCACTCGCGCTTCATGGC
CCGAAAAAAAACGCAAGTACTGGTTGTCGTACAGGGACAGATAACGAATG
TCATGCGCCGTCGTTCCCAAGGCGGATGCTGTCTGGCTTGCCGAGGGCCG
GCTACTGCACAAAACACTCTGGGCATGATGCGTGAACCTGGCCAGCTCCA
CCCCATACTTCTTGCAAAATAGTTTCTTCCGCGCTTTGCCCTCCAAGGCA
TTTATCAGGTGCACGGTTCCGTCCTCCGCCGCGGTCACTAAATACTCACC
TTCCCGATGATAATCCAAGCAAGTGACTGGAGCCGTCCCCGAAACCACGC
AGCCACGTTGCAGCTCCTGCACCCGGACGGCTTCCAGGCCACTCATCCCG
CTACTTCCGCACGTCATCGTCAATTTCCAACTGCGTAGGTGTGTGAGGTG
GTATACGTGTGGTTTAGAATGGCCAAATTGCTGTGTGGAAGAAGTAAGGC
TTTCATCATCAAAGCGGCATTCTTCATCTGCCACTTTGTACTTCGGCACA
TCCACCACTCACAGCCCTTCCATCCAATTCACACCCCAGCACCAAAGGTA
AAACGACAAGGAAGCTTATCGGCCCGCTCGCCAGCTTGCCGCAGCCCTAG
CTTCCAGTCAATGGAGgtcagttagctcctgtacgcatgccccaacatgc
cctccctctccatcctcatttctctcatttcccctttcatttgtgttcat
ccttgaagAAATTCGCCAAGTGGGCCGATAAAGGTACGGGTATCAACCCT
TTTTTGCCACCACGCTCCACCACCTCCTCCACGGCAGCCAAGGCAGGGGG
CCTGGTTCTCAGTCTCGGCCTGCTCGCCGTGCGCCTGCCCCTCCTCTGTA
TCACAGGCAGCTGGCTCTTCCTCGTCAGTCTTCTCACCACCCCTTGGTTC
GACATTTTGACTGGCAGTCTCCTTCTTGCCGCCTGCTATGTCAATCACGC
ACCAAACCTACACACCGGAGGCTCTCCCACTCCCGAGCAAACAAGCATCA
CTCTCCTAGCCCTAGGAGTAAGCCTGGGCCTCCTCCCCCCCCTCCATCGT
CTTTTCTCCCTCCTCCTCCTCCGCCCAGCCCTTGCCGCTGTCCTCAAAAC
TATGGGCATATCCTTTATTGAACAACATGCGAATTTACGGAAGCTCGGTT
TGAGGCCACCAGGGCACAAGCCTCTAGTTACACGCGTGGGTGCGACCATT
CAACCCGGGGACCTCCTCCTGAGCAATCACACCTCTGCCTTGGACATCCT
TTATTTTGCCAGTCGTTCCTTACCGTTGTTTTCATGTTTCACGCTTGCCC
CCGAGATAAGATTTAGCTCCCTGTCGGCTTTCGGAGCGGTGTGGAAGGCA
GGCAAAGTACCTAATAAAGCAGGCCAAGGAGTGACTTTGGACAAGGTCTT
AGCAGAAGCCAAGAGGGAGAGAAGGTCATTGGTAGTGTTTCCGGAGATGG
TACGATCGAATGGGGAAGGAATATTGGCCTTTCCCAAGGGAGTGTTGGAC
GGTTTAGCGGGGGCAGGGGAGGGAGGGGGAGGAGCAGCAGGAGGAAGCGT
AGGAGTGCATTTGTTTGGGTTTAGGTGCGTTGTGGGAGAGGAGGGGGAAT
ACGGGAGGGAGAGAAGATGAAAGCAAGCTTGGAATACACCGTGATGCAGC
TGCGGGGGTCAAGCATATTATGCACTCCCGTAAACATTCTCTTCGACGGA
AAGGGTCATAGAAAGCGATGCCAGTGGCGCCTGAGGAGGGTGGGTTGGGA
GACGTTGCCTTAATGCTGCCTATGGATGTCATGTCTTGAACATGGATTCC
ACTACGTTCTTCCTATCTTTCTTCTCTCATACACATGCATATGTCTTCCC
ACACGACAGTGCCGTCAAAGGCGACCTTCTTGCCACGCATACCGTTGGTA
GCAGCTTGCGTTTCTTTTTCAGGATCCTCTGCCGACCGCGAACCACCGTC
CACGTCACTTACGTCTGCGCGCGAGACGTGCCTTCTTATCCCGGAAGCCG
CTGCAGCAGTGGGAATAAAAGCACCAGCAGCACACCAGCGCAATGGAGTG
AGGAAATTAGAGGCCTTCTGGCCGGTATGTTGGGACGACCTAAGCTTGGG
TTGGGGTACGATGATTTCGTAACCTTTGGTAAATATTATGCGGCAGTTCA
GATTAAAGATGATAAAGCAGCAGCGGCGTTGGCGAGTGCGAGGGAGAAGC
TGTAGCGATGAGGAAGGGAGGGGG
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protein sequence of NO07G03090.3

>NO07G03090.3-protein ID=NO07G03090.3-protein|Name=NO07G03090.3|organism=Nannochloropsis oceanica|type=polypeptide|length=428bp
MPQHALPLHPHFSHFPFHLCSSLKKFAKWADKGTGINPFLPPRSTTSSTA
AKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAAC
YVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALA
AVLKTMGISFIEQHANLRKLGLRPPGHKPLVTRVGATIQPGDLLLSNHTS
ALDILYFASRSLPLFSCFTLAPEIRFSSLSAFGAVWKAGKVPNKAGQGVT
LDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEGGGGA
AGGSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCA
RDVPSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFV
TFGKYYAAVQIKDDKAAAALASAREKL*
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protein sequence of NO07G03090.2

>NO07G03090.2-protein ID=NO07G03090.2-protein|Name=NO07G03090.2|organism=Nannochloropsis oceanica|type=polypeptide|length=370bp
MAKLLCGRSKAFIIKAAFFICHFVLRHIHHSQPFHPIHTPAPKVKRQGSL
SARSPACRSPSFQSMEKFAKWADKGTGINPFLPPRSTTSSTAAKAGGLVL
SLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNL
HTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGI
SFIEQHANLRKLGLRPPGHKPLVTRVGATIQPGDLLLSNHTSALDILYFA
SRSLPLFSCFTLAPEIRFSSLSAFGAVWKAGKVPNKAGQGVTLDKVLAEA
KRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEGGGGAAGGSVGVH
LFGFRCVVGEEGEYGRERR*
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protein sequence of NO07G03090.1

>NO07G03090.1-protein ID=NO07G03090.1-protein|Name=NO07G03090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=470bp
MAKLLCGRSKAFIIKAAFFICHFVLRHIHHSQPFHPIHTPAPKVKRQGSL
SARSPACRSPSFQSMEKFAKWADKGTGINPFLPPRSTTSSTAAKAGGLVL
SLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNL
HTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGI
SFIEQHANLRKLGLRPPGHKPLVTRVGATIQPGDLLLSNHTSALDILYFA
SRSLPLFSCFTLAPEIRFSSLSAFGAVWKAGKVPNKAGQGVTLDKVLAEA
KRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEGGGGAAGGSVGVH
LFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDVPSYPG
SRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAA
VQIKDDKAAAALASAREKL*
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Synonyms
Publications