NO07G01580, NO07G01580 (gene) Nannochloropsis oceanica

Overview
NameNO07G01580
Unique NameNO07G01580
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1814
Alignment locationchr7:478169..479982 -

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Properties
Property NameValue
DescriptionPleckstrin like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:478169..479982 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
Homology
BLAST of NO07G01580 vs. NCBI_GenBank
Match: EWM27145.1 (Pleckstrin like protein [Nannochloropsis gaditana])

HSP 1 Score: 259.2 bits (661), Expect = 7.200e-66
Identity = 129/138 (93.48%), Postives = 132/138 (95.65%), Query Frame = 0
Query:    1 MRGTYIDPNTNIRYDTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEGGD-DDDGSDSEE 138
            MRGTY+DP TNIRYDTNNADFEGWLTKQSSWLK+WRRRYFILKGSKLFFAKNE  SPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGE GD DDDGSD E+
Sbjct:    1 MRGTYMDPETNIRYDTNNADFEGWLTKQSSWLKEWRRRYFILKGSKLFFAKNEMCSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEAGDEDDDGSDYED 138          
BLAST of NO07G01580 vs. NCBI_GenBank
Match: GAX17270.1 (hypothetical protein FisN_10Lh127 [Fistulifera solaris])

HSP 1 Score: 179.5 bits (454), Expect = 7.200e-42
Identity = 81/118 (68.64%), Postives = 101/118 (85.59%), Query Frame = 0
Query:    2 RGTYIDPNTNIRYDTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTY 120
            R  Y+DP TNI Y+T  +D+EG+LTKQS+WLK+WRRRYFILKGSKLFF KNE  +PHGM+DL+   TVKSA+LK++KR+++E+STPET +L+YADTE EKDDWIG VG+AIVR S TY
Sbjct:  185 RPPYVDPITNIVYETEPSDYEGYLTKQSAWLKEWRRRYFILKGSKLFFGKNELSAPHGMLDLALATTVKSADLKSKKRHSMEISTPETCYLLYADTESEKDDWIGRVGKAIVRCSRTY 302          
BLAST of NO07G01580 vs. NCBI_GenBank
Match: OEU23346.1 (PH domain-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 178.7 bits (452), Expect = 1.200e-41
Identity = 80/115 (69.57%), Postives = 98/115 (85.22%), Query Frame = 0
Query:    2 RGTYIDPNTNIRYDTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSS 117
            R  Y+DPNTNI YDT+  ++EG+LTKQS WLKDWRRRYF+LKGS LF+  N+  SPHGMIDL+ C TVKSA+LK++KRN+ E+STPE T+L+YADTE+EKDDWIG VG+AIVR S
Sbjct:  129 RPPYVDPNTNIIYDTDQPEYEGFLTKQSMWLKDWRRRYFLLKGSNLFYCSNDYSSPHGMIDLALCTTVKSADLKSRKRNSFEISTPEITYLLYADTEQEKDDWIGRVGKAIVRCS 243          
BLAST of NO07G01580 vs. NCBI_GenBank
Match: CBN75984.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 177.6 bits (449), Expect = 2.700e-41
Identity = 83/118 (70.34%), Postives = 96/118 (81.36%), Query Frame = 0
Query:    2 RGTYIDPNTNIRYDTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTY 120
            R  + D  T +RYD NN D  GWL K+S WLKDWR R+F+LKGS LFFAK+E  +PHG IDLSSCMTVKSAE K  KRNALEVST ETT+ MYA+TEKEKDDWIGA+GRAIV++S+TY
Sbjct:    7 RPPFHDQKTGVRYDCNNPDHAGWLRKESVWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHETTYFMYANTEKEKDDWIGAIGRAIVQASSTY 124          
BLAST of NO07G01580 vs. NCBI_GenBank
Match: GAX18660.1 (hypothetical protein FisN_10Hh127 [Fistulifera solaris])

HSP 1 Score: 175.3 bits (443), Expect = 1.400e-40
Identity = 85/134 (63.43%), Postives = 106/134 (79.10%), Query Frame = 0
Query:    2 RGTYIDPNTNIRYDTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEGGDDDDGSDS 136
            R  Y+DP TNI Y+T  +D+EG+LTKQS WLK+WRRRYFILKGSKLFF KNE  +PHGM+DL+   TVKSA+LK++KR+++E+STPET +L+YADTE EKDDWIG VG+AIVR S TY  +       +DGS S
Sbjct:  179 RPPYVDPITNIVYETEPSDYEGYLTKQSVWLKEWRRRYFILKGSKLFFGKNELSAPHGMLDLALATTVKSADLKSKKRHSMEISTPETCYLLYADTESEKDDWIGRVGKAIVRCSRTYYSK----SQMNDGSGS 308          
BLAST of NO07G01580 vs. NCBI_GenBank
Match: XP_009036003.1 (hypothetical protein AURANDRAFT_8195, partial [Aureococcus anophagefferens] >EGB08966.1 hypothetical protein AURANDRAFT_8195, partial [Aureococcus anophagefferens])

HSP 1 Score: 173.3 bits (438), Expect = 5.200e-40
Identity = 82/105 (78.10%), Postives = 92/105 (87.62%), Query Frame = 0
Query:   25 LTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEGGDD 130
            LTKQS WLKDWRRRYF+LK SKLFF K E+  PHGMIDL+SCMTVKSAE KA KRNALEVSTP+TT+LM+AD+EKEKDDWIGA+GRAIVR S+TYT + G  GDD
Sbjct:    1 LTKQSVWLKDWRRRYFVLKSSKLFFCKGESSVPHGMIDLASCMTVKSAEYKAHKRNALEVSTPDTTYLMFADSEKEKDDWIGAIGRAIVRCSSTYTNDDGMEGDD 105          
BLAST of NO07G01580 vs. NCBI_GenBank
Match: XP_008862337.1 (hypothetical protein H310_01094 [Aphanomyces invadans] >ETW08532.1 hypothetical protein H310_01094 [Aphanomyces invadans])

HSP 1 Score: 149.8 bits (377), Expect = 6.100e-33
Identity = 69/118 (58.47%), Postives = 96/118 (81.36%), Query Frame = 0
Query:   14 YDTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEGGDDDD 132
            YD +N DFEG LTK+S WLK+WR RYF+LKG+KL+F + +  SPHG+IDLS C+TVKSAE K  KR   EV+TPE+T+ M+A++EK+K++WIGA+GRAIV+ S+++T E  EG +D++
Sbjct:    5 YDLSNPDFEGELTKRSVWLKEWRARYFVLKGNKLYFCRVKGESPHGVIDLSECLTVKSAEEKTNKRYCFEVATPESTYYMHAESEKQKEEWIGAIGRAIVKFSSSFTGE--EGANDEE 120          
BLAST of NO07G01580 vs. NCBI_GenBank
Match: XP_009821855.1 (hypothetical protein H257_00729 [Aphanomyces astaci] >ETV89455.1 hypothetical protein H257_00729 [Aphanomyces astaci])

HSP 1 Score: 147.9 bits (372), Expect = 2.300e-32
Identity = 68/118 (57.63%), Postives = 94/118 (79.66%), Query Frame = 0
Query:   14 YDTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEGGDDDD 132
            +D +N DFEG LTK+S WLK+WR RYF+LKG+KL+F + +  SPHG+IDLS C+TVKSAE K  KR   EV+TPE T+ M+A++EK+K++WIGA+GR IV+ S+++T E  EG +D+D
Sbjct:    5 FDLSNPDFEGELTKRSVWLKEWRTRYFVLKGNKLYFCRVKGESPHGVIDLSECLTVKSAEEKTNKRYCFEVATPEATYYMHAESEKQKEEWIGAIGRTIVKFSSSFTGE--EGANDED 120          
BLAST of NO07G01580 vs. NCBI_GenBank
Match: OQR98999.1 (hypothetical protein ACHHYP_07492 [Achlya hypogyna])

HSP 1 Score: 146.4 bits (368), Expect = 6.800e-32
Identity = 67/117 (57.26%), Postives = 94/117 (80.34%), Query Frame = 0
Query:   15 DTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEGGDDDD 132
            D +N D+EG LTK+S WLK+WR RYF+LKG+KL+F + +  +PHG+IDLS C+TVKSAE K  KR   EV+TPE+T+ M+A++EK+KD+WIGA+GRAIV+ S+++T +  +G DD D
Sbjct:    6 DLSNPDYEGLLTKRSVWLKEWRTRYFVLKGNKLYFCRAQGEAPHGVIDLSECLTVKSAEEKTNKRFCFEVATPESTYYMHAESEKQKDEWIGAIGRAIVKFSSSFTGD--DGYDDQD 120          
BLAST of NO07G01580 vs. NCBI_GenBank
Match: XP_005855267.1 (1-like protein [Nannochloropsis gaditana CCMP526] >EKU21092.1 1-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 146.0 bits (367), Expect = 8.800e-32
Identity = 86/138 (62.32%), Postives = 88/138 (63.77%), Query Frame = 0
Query:    1 MRGTYIDPNTNIRYDTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEGGD-DDDGSDSEE 138
            MRGTY+DP TNIRYDTNNADFE                                              VKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGE GD DDDGSD E+
Sbjct:    1 MRGTYMDPETNIRYDTNNADFE----------------------------------------------VKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEAGDEDDDGSDYED 92          
The following BLAST results are available for this feature:
BLAST of NO07G01580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27145.17.200e-6693.48Pleckstrin like protein [Nannochloropsis gaditana][more]
GAX17270.17.200e-4268.64hypothetical protein FisN_10Lh127 [Fistulifera sol... [more]
OEU23346.11.200e-4169.57PH domain-like protein [Fragilariopsis cylindrus C... [more]
CBN75984.12.700e-4170.34conserved unknown protein [Ectocarpus siliculosus][more]
GAX18660.11.400e-4063.43hypothetical protein FisN_10Hh127 [Fistulifera sol... [more]
XP_009036003.15.200e-4078.10hypothetical protein AURANDRAFT_8195, partial [Aur... [more]
XP_008862337.16.100e-3358.47hypothetical protein H310_01094 [Aphanomyces invad... [more]
XP_009821855.12.300e-3257.63hypothetical protein H257_00729 [Aphanomyces astac... [more]
OQR98999.16.800e-3257.26hypothetical protein ACHHYP_07492 [Achlya hypogyna... [more]
XP_005855267.18.800e-3262.321-like protein [Nannochloropsis gaditana CCMP526] ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01580.2NO07G01580.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G01580.1NO07G01580.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580510gene_2480Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100010g13gene3334Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01580.2NO07G01580.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G01580.1NO07G01580.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01580 ID=NO07G01580|Name=NO07G01580|organism=Nannochloropsis oceanica|type=gene|length=1814bp
CGATGCTGCTTGCTTGTCTTGTGGGTGCGTGCGGGACGGGGGGGGAGCGT
TAGCATCAAGTACCAATACCAGACATCGTCCACGAACAAAAGCATCAAGG
CATATAGAACAAGAAGGATGTGTGTGACCAAGCAAAGCCTCAGCTAACCT
CAAAGCAGCACTAAAGCAAGGATGACCCTCGCTACGCGCAGAGCCTCCTC
TGAAATTTGCCAGCGACGACAAGAGGCCCCGCCGAGCGATATGGGCAAGC
CGTCTTGTTATTCATTGGCCGCTCCCCCACTCACATGCCTCCACACGCAT
ACCAAGCAGTCTCAACGCTCACTACCCTCCTTACTCCTATGTTTCTACAG
GCTCCGCTGGTTGTTTGGATTGCGTAGCTTTGACAGCCGCCGCGTCGTCT
TGCCACCCGTCATAGTCATCGCAGAGAGCGACAGGAACACTTGCGTCTCC
AAATCGAATAGCACTCTTAGTCATGAGGGGCACCTACATAGACCCCAATA
CAAACATCCGCTACGACACCAATAATGCGGACTTTGAAGgtacgtgggtg
tgctggccaagctgttttttttaaaagcaaatcaagggaagacggtgggg
ctgaatgccataaataggtcagaaaacccacctctctcaaagaacctagg
gttctgacccagcagaaacggcccagagagtatgcctatgatccgtagtc
ctgctctgtcttgtgctgtgtagaaactgggtctgctgtatgtggtggct
caggctctggttcctcattcttggtagcgttggagaggcctagaaaaaat
tagtctggcagaatcacagcccaagaagccagggatatcacgccacttcc
acgactcaggcataactggcatcaatataggattgattgctgcttggctc
cggtttcaggcttgcccccaaaatatggctcaacagcctgactaagaagt
gaaccaagttgccagtggttcctccgacgtttgggaccagtccctcgatg
aagattgtccataacgagctcttatgcgcacccgtttccatttacaacat
ataacagGGTGGTTGACAAAGCAGAGCAGCTGGCTGAAGGATTGGAGGAG
ACGATACTTCATCCTCAAGGGTAGCAAACTGTTCTTCGCCAAGgtgggag
gagggtggggcggtcgagctgcggagggtttaagtcgggtggagggatca
aaatgaataggggggggtggaatggagtgcttgtatcccaattagctttg
cacgtaacctcttggtgcggtcgattggttcttggtgtgggaatggccag
ggtgtgcaccgccacacggtccacttcccaccacctgttgaattatcagt
ctccaagagggtttcctccccccacagcacccgcacttaccatcatccac
tctctccgctccccactatcttaataaacagAACGAGGCGGGATCCCCCC
ACGGGATGATCGACCTTTCGTCGTGCATGACCGTCAAATCCGCGGAGCTC
AAAGCCCAAAAGCGAAACGCTCTAGAAGTCTCCACCCCTGAGACCACCTT
CTTAATGTACGCGGACACGGAGAAAGAAAAAGATGACTGGATCGGTGCAG
TCGGTCGTGCCATTGTGCGGAGCTCGACCACGTACACGCAGGAGGTGGGG
GAGGGGGGAGATGACGACGACGGGAGTGATAGTGAAGAGGACTAGGGCGG
GGTTGGAACGGAAGGCGGGATGTGTTTTTTGTATAGCTTACACAACAGCT
CTAGCCAATGAGGATGATAAGAAAGAGGAGACAGACAGAAAGAAAGGAAG
CCGATGAAATGTCA
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protein sequence of NO07G01580.2

>NO07G01580.2-protein ID=NO07G01580.2-protein|Name=NO07G01580.2|organism=Nannochloropsis oceanica|type=polypeptide|length=128bp
MRTRFHLQHITGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMI
DLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRA
IVRSSTTYTQEVGEGGDDDDGSDSEED*
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protein sequence of NO07G01580.1

>NO07G01580.1-protein ID=NO07G01580.1-protein|Name=NO07G01580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=139bp
MRGTYIDPNTNIRYDTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFA
KNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKE
KDDWIGAVGRAIVRSSTTYTQEVGEGGDDDDGSDSEED*
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Synonyms
Publications