NO05G05150, NO05G05150 (gene) Nannochloropsis oceanica

Overview
NameNO05G05150
Unique NameNO05G05150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2115
Alignment locationchr5:1353270..1355384 -

Link to JBrowse

Properties
Property NameValue
DescriptionSrp72
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1353270..1355384 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR026270SRP72
IPR019734TPR_repeat
Vocabulary: Cellular Component
TermDefinition
GO:0005623cell
Homology
BLAST of NO05G05150 vs. NCBI_GenBank
Match: XP_005854352.1 (signal recognition particle subunit SRP72 [Nannochloropsis gaditana CCMP526] >XP_005856139.1 signal recognition particle subunit SRP72 [Nannochloropsis gaditana CCMP526] >EKU20207.1 signal recognition particle subunit SRP72 [Nannochloropsis gaditana CCMP526] >EKU22005.1 signal recognition particle subunit SRP72 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 554.7 bits (1428), Expect = 4.200e-154
Identity = 391/685 (57.08%), Postives = 474/685 (69.20%), Query Frame = 0
Query:   10 AASEKLRPLYAALHEAFEEEDHEAALVAATKLLKVAPDEVEARAAKAVAELYTGDYALALSTALPAQELERAYALYRLGRGVEALAILDASVLKDEESFRHLRGQALFKEGRYDEAADVFAALVSEA-GANGVEDPELMTNLYAAFVAARRGQEALARFPFSEELMDSCYELAFNTGAAMIDAGDLTAAEARLREARATCVRVGEEDGMTPSALLDEGSGIQIELAYVLAAQGRRGEAFEMVTTLMNKASKLSDPVVRVLAINNAAALREGGRHHKDMSSNLKKMKGPWREAKSKLLPMQRVLLTLNKALMLMHSGKIDDAKQVLEAVKEEG----GKEGGQA--WWRVAMLEIAIKMQDDKSRTSSYSPNADLAALLERVRTEA------PSADAEKTVGTALAQVLVYQGDLHEAASVLESIASLQGYPAHAATLASLYARLGQKDKSAAVFDKALASFPPFLPPSFKIKLLQGAAAVRTAQGDHAGAANVLKRLLSGGEDVKEELESDARLRAVAALVVATSWVDVGEAEFLAQKELPAVHLEEG-----LDAEALEAHGLPRRRSSLAGLRRTSLPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYLAELAAAGKYDAARPGPPR------TLSGGSPKARGRTTRGE--RRAGAGLWARRDPGMV 669
            A S +L+ LYA L+ A EEE  E  L AA  +LK APDE+EARAAKA A L+TGDYALAL+TALPAQ+ ERAYALYRLGRG EALA+LD S  ++E SFRHLRGQ LFKEGRYDEA +VF+ALV E   A   ED EL+TNLYAAFVAARRGQEAL+RFP   EL ++ YELAFN+GAA++D GDL+AAEARLREA   C R+G E+ M+P  +L+EGSGI+ ELAYVLA+QGRR E  EMV+TL  KA+KLSDPVVR  A+  AAAL+ GGR        L K++    EA  K++P Q +LL +N+ALML+HSG++DDA++ + A+K+E      K GGQA   WRVA++E+AIKMQ      ++  P  DL  L + V+  A       S DAE+ VGTA AQ LVYQG L EAA VLESI SLQGYPA  AT+AS+YA+LG +++  A FD+A++SFPP LPP F  KLL+G AA+R A+GD AGAA  L+ LL   + +K EL+SD RLR +A LV+A SWVD  EA  +A+ ELPAV  E G     +DA  LE  GLP                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      YLA+L A GKYDA+RPGPP         +  S   RG+  RG+     G+G  A RD  M+
Sbjct:    7 APSAELQDLYATLYHALEEEAFEEVLSAADAVLKSAPDELEARAAKAAAALHTGDYALALTTALPAQDFERAYALYRLGRGSEALAVLDGSPEQNEISFRHLRGQVLFKEGRYDEAIEVFSALVEEGRKAGDEEDVELLTNLYAAFVAARRGQEALSRFPLEAELRETSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALK-GGRGQTKAQGGLNKLQAALEEAGPKMIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVALVEVAIKMQ-----RAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQCLVYQGKLREAAQVLESIPSLQGYPAVVATVASIYAKLGLEEEVLATFDRAVSSFPPSLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLD-SDKLKGELDSDVRLRTLADLVMAMSWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLP-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARDAAML 673          
BLAST of NO05G05150 vs. NCBI_GenBank
Match: EWM27885.1 (srp72 [Nannochloropsis gaditana])

HSP 1 Score: 554.7 bits (1428), Expect = 4.200e-154
Identity = 391/685 (57.08%), Postives = 474/685 (69.20%), Query Frame = 0
Query:   10 AASEKLRPLYAALHEAFEEEDHEAALVAATKLLKVAPDEVEARAAKAVAELYTGDYALALSTALPAQELERAYALYRLGRGVEALAILDASVLKDEESFRHLRGQALFKEGRYDEAADVFAALVSEA-GANGVEDPELMTNLYAAFVAARRGQEALARFPFSEELMDSCYELAFNTGAAMIDAGDLTAAEARLREARATCVRVGEEDGMTPSALLDEGSGIQIELAYVLAAQGRRGEAFEMVTTLMNKASKLSDPVVRVLAINNAAALREGGRHHKDMSSNLKKMKGPWREAKSKLLPMQRVLLTLNKALMLMHSGKIDDAKQVLEAVKEEG----GKEGGQA--WWRVAMLEIAIKMQDDKSRTSSYSPNADLAALLERVRTEA------PSADAEKTVGTALAQVLVYQGDLHEAASVLESIASLQGYPAHAATLASLYARLGQKDKSAAVFDKALASFPPFLPPSFKIKLLQGAAAVRTAQGDHAGAANVLKRLLSGGEDVKEELESDARLRAVAALVVATSWVDVGEAEFLAQKELPAVHLEEG-----LDAEALEAHGLPRRRSSLAGLRRTSLPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYLAELAAAGKYDAARPGPPR------TLSGGSPKARGRTTRGE--RRAGAGLWARRDPGMV 669
            A S +L+ LYA L+ A EEE  E  L AA  +LK APDE+EARAAKA A L+TGDYALAL+TALPAQ+ ERAYALYRLGRG EALA+LD S  ++E SFRHLRGQ LFKEGRYDEA +VF+ALV E   A   ED EL+TNLYAAFVAARRGQEAL+RFP   EL ++ YELAFN+GAA++D GDL+AAEARLREA   C R+G E+ M+P  +L+EGSGI+ ELAYVLA+QGRR E  EMV+TL  KA+KLSDPVVR  A+  AAAL+ GGR        L K++    EA  K++P Q +LL +N+ALML+HSG++DDA++ + A+K+E      K GGQA   WRVA++E+AIKMQ      ++  P  DL  L + V+  A       S DAE+ VGTA AQ LVYQG L EAA VLESI SLQGYPA  AT+AS+YA+LG +++  A FD+A++SFPP LPP F  KLL+G AA+R A+GD AGAA  L+ LL   + +K EL+SD RLR +A LV+A SWVD  EA  +A+ ELPAV  E G     +DA  LE  GLP                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      YLA+L A GKYDA+RPGPP         +  S   RG+  RG+     G+G  A RD  M+
Sbjct:   34 APSAELQDLYATLYHALEEEAFEEVLSAADAVLKSAPDELEARAAKAAAALHTGDYALALTTALPAQDFERAYALYRLGRGSEALAVLDGSPEQNEISFRHLRGQVLFKEGRYDEAIEVFSALVEEGRKAGDEEDVELLTNLYAAFVAARRGQEALSRFPLEAELRETSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALK-GGRGQTKAQGGLNKLQAALEEAGPKMIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVALVEVAIKMQ-----RAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQCLVYQGKLREAAQVLESIPSLQGYPAVVATVASIYAKLGLEEEVLATFDRAVSSFPPSLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLD-SDKLKGELDSDVRLRTLADLVMAMSWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLP-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARDAAML 700          
BLAST of NO05G05150 vs. NCBI_GenBank
Match: CBJ28999.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 169.5 bits (428), Expect = 3.800e-38
Identity = 177/581 (30.46%), Postives = 275/581 (47.33%), Query Frame = 0
Query:    6 GVASAASEKLRPLYAALHEAFEEEDHEAALVAATKLLKVAPDEVEARAAKAVAELYTGDYALALSTALPAQEL----ERAYALYRLGRGVEALAILDASV--------LKDEESFRHLRGQALFKEGRYDEAADVFAALV--SEAGANGVEDPELMTNLYAAFVAARRGQEALARFPFSEELMD--SCYELAFNTGAAMID----AGDLT-AAEARLREARATCVRVGEEDGMTPSALLDEGSGIQIELAYVLAAQGRRGEAFEMVTTLMNKASKLSDPVVRVLAINNAAALREGGRHHKDMSSNLKKMKGPWREAKSK-LLPMQRVLLTLNKALMLMHSGKIDDAKQVLEAVKEEGGKEGGQAWWRVAMLEIAIKMQDDKSRTSSYSPNADLAALLERVRTEAPSADAEKTVGTALAQVLVYQGDLHEAASVLESI-ASLQGYPAHAATLASLYARLGQKDKSAAVFDKALASF---PPFLPPSFKIKLLQGAAAVRTAQGDHAGAANVLKRLLSGGEDVKEELESDARLRAVAALVVATSWVDVGEAEFLAQKELP---AVHLEEGLDAEALEAHGLPR 558
            GVA     + + ++  +    + ED + A+     +   +PD+++A   K +  ++   Y  AL +A    +     ERAY L+RLGR  EAL +  A           K   + RHL  QAL++ GR+ EAA+V+ ++    E    G   P +  N+ AA+  A  G++AL      E + +  + +EL +N G A++     AGD T AAE+ L++A   C       G + +   DE S ++ +LAY  +  G+   A E +  ++   S+ SDP V +++  N AAL  GG  +KD    LK++K    E   K LL  Q      NK L+L+  GK ++ +  LEAV+                +E A+  +  K   +S    A LA          P +  E ++   +AQ+   + DL  AA  LE +  ++ G PA A+ LA LY  +G  +K+AAV  +A  +       L    + + L G A     QG H  AA+  ++LL  G     EL+ D R++A A+LV+A S+ D G++E  A K LP        EGLD  ALE   LPR
Sbjct:    5 GVAEVVVTESQRVWREVRACLQNEDFDKAVQLCNTVRSKSPDDIDAIRVKCLCLIHQDKYDKALQSASGKHKAVLSPERAYCLFRLGRLEEALEVSRAGESGVSGGGDSKRARALRHLEAQALYRLGRHGEAAEVYCSIAEDEERRTGGGGFPPVSVNVAAAYAGAGCGEKALGALSVEEAMEEEGAPWELLYNLGTALVQRRGGAGDDTAAAESCLQQAEEACRESLVALGHSDAEAADEASMVRSQLAYAASRAGKTAAAAEQLNQVVR--SRPSDPAVSLVSTANLAAL--GG--YKDQQEALKRLKAAMSEKSEKGLLSKQLEACRFNKCLLLLQCGKTEECRDELEAVRSAYPNSD-----LGPRIEAALLSKRGKGGEASSVLKAHLA-------KAKPGSKEEVSLKLCVAQLYATENDLTLAAETLEGVGGAVSGTPAAASALAGLYLGMGDTEKAAAVVVRAAEAASRGDHDLEGDEQARALLGMADWLHDQGFHRQAADTYQKLLRLG----AELDGDLRIQAQASLVIAYSYFDSGKSEEEASK-LPYNADFGSIEGLDPLALEMTELPR 562          
BLAST of NO05G05150 vs. NCBI_GenBank
Match: XP_008619802.1 (hypothetical protein SDRG_15409 [Saprolegnia diclina VS20] >EQC26759.1 hypothetical protein SDRG_15409 [Saprolegnia diclina VS20])

HSP 1 Score: 165.6 bits (418), Expect = 5.500e-37
Identity = 165/537 (30.73%), Postives = 247/537 (46.00%), Query Frame = 0
Query:   18 LYAALHEAFEEEDHEAALVAATKLLKVAPDEVEARAAKAVA--ELYTGDYALALSTALPAQELERAYALYRLGRGVEALAILDASVLKDEESFRHLRGQALFKEGRYDEAADVFAALVSEAGANGVEDPELMTNLYAAFVAARRGQEALARFPFSEELMDSCYELAFNTGAAMIDAGDLTAAEARLREARATCVRVGEEDGMTPSALLDEGSGIQIELAYVLAAQGRRGEAFEMVTTLMNKASKLSDPVVRVLAINNAAALREGGRHHKDMSSNLKKMKGPWREA-KSKLLPMQRVLLTLNKALMLMHSGKIDDAKQVLEAVKEEGGKEGGQAWWRVAMLEIAIKMQDDKSRTSSYSPNADLAALLERVRTEAPSADAEKTVGTALAQVLVYQGDLHEAASVLESIASLQGYPAHAATLASLYARLGQKDKSAAVFDKALASFPPFLPPSFKIKLL-QGAAAVRTAQGDHAGAANVLKRLLSGGEDVKEELESDARLRAVAALVVATSWVDVGEAEFLAQKELPAVHLEEGLDAEAL 551
            L A L    E + ++ A+    K++   P+E  A  AK +A   L   D AL ++      ++E AY  Y+L R  + L IL A+V +   +  HL+ QA ++  ++D    ++ AL+++A A   +  EL TNL AA+ AA RG E   R   +    D  YE+AFN     + +GD++ A A + +A   C      DG +P+ +  E   + ++ AYVL  QGR  +A    T ++   +K SD  +  +A NN A L++    H D+  ++K++K    E   +K  P Q   +  N AL+     K D+ ++VL A+K              A    A+            S +A  +  L R R     ADA       LA VLV   +   AA  L SIA +       ATL +LY R G    S +V   ALA        S + + + +G  A + AQG++A AA   + LLS G      L  + RLR +A LVVA S+VD   AE  A+  L         D EAL
Sbjct:    8 LLAELQGHLERDAYQKAIDVCNKIVAATPNEAAAYKAKTIALIRLNKLDKALEVAQRFDYLKMEAAYCHYKLKRETKTLEIL-ATVPEKTPAVLHLQAQAHYRLNQFDAVISIYEALLAQA-APSDDTVELKTNLIAAYTAAGRGAELAGRHSLT---TDDSYEIAFNKSFVALQSGDVSTAAAHVADADRLCRLTLANDGCSPAEIEQEALVVAVQRAYVLQLQGRDDDALAGYTHVIQ--AKPSDATLVAVASNNLATLQK----HHDLFDSIKRLKAISSETLTTKCSPAQHEAVLANLALLWSWMKKPDETREVLAALK-------------TAFPATALAAPIQLHAVLGSSESAPSSEALARARATF-EADASINGRLCLAHVLVLLKEFGVAADTLRSIAEIAHSAGTVATLVALYDRAGNAGASQSVLHDALAFHAARDATSLEARAIEEGDGAYQLAQGNYAAAATRFESLLSTG-----ALTPEMRLRCLAKLVVALSFVDASAAE--ARSSLLPTIAAASTDPEAL 512          
BLAST of NO05G05150 vs. NCBI_GenBank
Match: GAX95721.1 (signal recognition particle, putative [Pythium insidiosum])

HSP 1 Score: 155.2 bits (391), Expect = 7.400e-34
Identity = 150/516 (29.07%), Postives = 244/516 (47.29%), Query Frame = 0
Query:   19 YAALHEAFEEEDHEAALVAATKLLKVAPDEVEARAAKAVA--ELYTGDYALALSTALPAQELERAYALYRLGRGVEALAILDASVLKDEESFRHLRGQALFKEGRYDEAADVFAALVSEAGANGVEDPELMTNLYAAFVAARRGQEALARFPFSEELMDSCYELAFNTGAAMIDAGDLTAAEARLREARATCVRVGEEDGMTPSALLDEGSGIQIELAYVLAAQGRRGEAFEMVTTLMNKASKLSDPVVRVLAINNAAALREGGRHHKDMSSNLKKMKGPWREAKS-KLLPMQRVLLTLNKALMLMHSGKIDDAKQVLEAVKEEGGKEGGQAWWRVAMLEIAIKMQDDKSRTSSYSPNADLAALLERVRTEAPSADAEKTVGTALAQVLVYQGDLHEAASVLESIASLQGYPAHAATLASLYARLGQKDKSAAVFDKALASF--PPFLPPSFKIKLLQGAAAVRTAQGDHAGAANVLKRLLSGGEDVKEELESDARLRAVAALVVATSWVDVGEAE 530
            +A L  A   E++  A+    K+    PD+ +A   K VA   L   D AL L+   PA   ERAY LYRL R  +AL +L A+      + RHL  Q  +++G+Y +A D+   L+ EA   G +  EL  NL AA+ +A R QE   R    +  +D  +E+AFN     I+ GD +AA+A L +A   C  + E DG++ + + +E + ++++ A+V   QG    A      ++    KL++  V  +A NN  A+    R+ +D+  +LK++K      +S KL P+Q+  +  N+AL+L    K ++ +  L+ ++ +      +    + +L +A+K         +   N  L   L                   LA + + Q     AA  LESIA +Q  P   ATL +LY   G    +  V  +AL       F  PS  +K+ +G  + +  +  +  AA+    LL G  +    ++ D RL ++A+LVVA S+ D   AE
Sbjct:    7 FAELQAALSRENYARAIEICNKIRSKTPDDQDAVKIKCVALIRLEKFDKALELAVKYPALAAERAYCLYRLKRDDDALQLLGAA---STPAQRHLAAQIHYRKGQYAQAIDL---LLQEATGRGEDLTELHANLLAAYASAGRSQELEHR----DIPVDDSWEVAFNKSFTAIETGDWSAADAHLSDAERLCREMLEADGVSAAEMENELAPVRVQKAFVKQMQGDHDAALAEYRAVLK--LKLTNQAVGAVATNNIVAI----RNDRDLLDSLKRLKALDAVVQSDKLTPVQQEAILANRALLLALLNKPEECRAALQTLQAQ--FPHARLASEITVL-LAVKDHHADGAIEALQGNLSLGGRL------------------GLAHLYLAQRQPARAAECLESIAEIQHTPGTVATLVALYDAAGNSASAQRVLQRALDHHRAVDFRSPS-AMKIREGDCSYKIQKKQYQAAADAYLELLEG--ESAGAMDPDLRLHSLASLVVALSFCDAAAAE 482          
BLAST of NO05G05150 vs. NCBI_GenBank
Match: XP_012202406.1 (hypothetical protein SPRG_20423 [Saprolegnia parasitica CBS 223.65] >KDO26884.1 hypothetical protein SPRG_20423 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 152.9 bits (385), Expect = 3.700e-33
Identity = 155/506 (30.63%), Postives = 236/506 (46.64%), Query Frame = 0
Query:   18 LYAALHEAFEEEDHEAALVAATKLLKVAPDEVEARAAKAVA--ELYTGDYALALSTALPAQELERAYALYRLGRGVEALAILDASVLKDEESFRHLRGQALFKEGRYDEAADVFAALVSEAGANGVEDPELMTNLYAAFVAARRGQEALARFPFSEELMDSCYELAFNTGAAMIDAGDLTAAEARLREARATCVRVGEEDGMTPSALLDEGSGIQIELAYVLAAQGRRGEAFEMVTTLMNKASKLSDPVVRVLAINNAAALREGGRHHKDMSSNLKKMKGPWREAKS-KLLPMQRVLLTLNKALMLMHSGKIDDAKQVLEAVKEEGGKEGGQAWWRVAMLEIAIKMQDDKSRTSSYSPNADLAALLERVRTEAPSADAEKTVGTALAQVLVYQGDLHEAASVLESIASLQGYPAHAATLASLYARLGQKDKSAAVFDKALASFPPFLPPSFKIKLL-QGAAAVRTAQGDHAGAANVLKRLLSGGEDVKEELESDARLRAVAALVVA 520
            L A L    E + ++ A+    K++   P+E  A  AK +A   L   D AL ++      ++E AY  Y+L R  +AL IL A++ +   +  HL+ QA ++  ++D    ++ AL+++A  +  +  EL TNL AA+ AA RG E   R   +    D  YE+AFN     + +GD++ A A + +A   C      DG +P+ +  E   I ++ AYVL  QGR  +A    T ++   +K SD  +  +A NN A L++    H D+  ++K++K    E  S K  P Q   +  N AL+     K D+ + VL A+K           +    L   I++      +S  +P+AD    L R R     ADA       LA VLV Q +   AA  L SI  +       ATL +LY R      S +V   ALA        S + + + +G    + AQG+HA AA   + LLS G      L  + RLR +A LV A
Sbjct:    8 LLAELQGHLERDAYQKAIDVCNKIVAATPNEAAAYKAKTIALIRLNKLDKALEVAQRFDYLKMEAAYCHYKLKRETKALEIL-ATLPEKTPAALHLQAQAHYRLNQFDAVISIYEALLAQASPSD-DTVELKTNLIAAYTAAGRGAELAGRHNLT---TDDSYEIAFNKSFVALQSGDVSTAAAHVADADRLCRSTLANDGYSPAEIEQEALVIAVQRAYVLQLQGRDDDALAGYTHVVQ--AKPSDASLVAVASNNMATLQK----HHDLFDSIKRLKAISSETLSAKCSPAQHEAILANLALLWSWMKKPDETRDVLAALKTA---------FPATALAAPIQLHAVLG-SSDAAPSAD---ALARARATF-EADATINGRLCLAHVLVLQKEFGAAADTLRSITEVAHSAGTVATLVALYDRASNAGASQSVLQDALAFHAARDATSVEARAIEEGDGEYQLAQGNHAAAAARFESLLSTG-----ALTPEMRLRCLAKLVKA 483          
BLAST of NO05G05150 vs. NCBI_GenBank
Match: XP_009535069.1 (hypothetical protein PHYSODRAFT_318537 [Phytophthora sojae] >EGZ10208.1 hypothetical protein PHYSODRAFT_318537 [Phytophthora sojae])

HSP 1 Score: 149.8 bits (377), Expect = 3.100e-32
Identity = 164/560 (29.29%), Postives = 265/560 (47.32%), Query Frame = 0
Query:    1 MAT--SAGVASAASEKLRPLYAALHEAFEEEDHEAALVAATKLLKVAPDEVEARAAKAVA--ELYTGDYALALSTALPAQELERAYALYRLGRGVEALAILDASVLKDEESFR-HLRGQALFKEGRYDEAADVFAALVSEAGANGVEDPELMTNLYAAFVAARRGQEALARFPFSEELMDSCYELAFNTGAAMIDAGDLTAAEARLREARATCVRVGEEDGMTPSALLDEGSGIQIELAYVLAAQGRRGEAFEMVTTLMNKASKLSDPVVRVLAINNAAALREGGRHHKDMSSNLKKMKG-PWREAKSKLLPMQRVLLTLNKALMLMHSGKIDDAKQVLEAVKEEGGKEGGQAWWRVAMLEIAIKMQDDKSRTSSYSPNADLAALLERVRTEAPSADAEKTVG--TALAQVLVYQGDLHEAASVLESIASLQGYPAHAATLASLYARLGQKDKSAAVFDKALASFPPFLPPSFK-IKLLQGAAAVRTAQGDHAGAANVLKRLLSGGEDVKEELESDARLRAVAALVVATSWVDVGEAEFLAQKELPAVHLEEGLDAEALE 552
            MAT  SA  A AAS      ++ L+ A + E++  A+    K+    PD+V+A   K VA   L   D AL L+        E+AY LYRL +  +AL +L    L+ + + + HL  Q  F++G YD++  ++  L+S  G  G +  EL TNL AA+ +A R QE   R    E  +D  +E+AFN     I + D  AAE  L  A   C      +G + + + +E + I+ +LAYV   +G   +A      ++    KL +  V  +A NN   +R+     +D+  + K++K         KL P Q+  +  N+ L+L    K ++ ++ LEA+K++       A   +A + + + ++D        SP A +  L +           + +VG    LA V + +G + +AA  + SI  L   P   ATL +LY + G    + AV ++AL         S + +K+ +G    +  +  +  AA+    LL G  +    ++ D RLR++A+LVVA S+ D   AE      LPAV  E G+D   LE
Sbjct:    1 MATTVSADAAVAAS------FSELNAALKRENYSRAVDICNKIRSKLPDDVDAVKVKCVALIRLEKFDKALELAVKYDFLSTEKAYCLYRLKQDDDALKLLGGGDLETQSTAQLHLAAQLHFRKGDYDQSIRIYELLLSR-GPEGDDLLELQTNLLAAYASAGRSQELKDR----EIPIDDGFEVAFNKSFVAIQSSDWEAAEELLLTAERLCCDTFVAEGASEAEIEEEVAVIKTQLAYVKQMRGNLDDALSDYRNVLK--LKLRNRAVGAVASNNIVTIRQ----DRDVLDSFKRLKNIDTAVLSDKLNPTQQEAILTNRTLLLCLMNKTEECRESLEALKKQ-----FPASKSIADIVVLLAIKDQ-------SPGAAIEQLQD-----------DMSVGGRLGLAHVYLTEGHVLKAAECIRSIEELAHSPGTVATLVALYEQAGDSASAQAVLERALIHHRAGNYTSEQAMKIREGDCWYKIQKKQYREAADAYLELLEG--ETAGAMDRDLRLRSMASLVVALSFCDAEAAEARCAM-LPAVE-ESGVDPSELE 516          
BLAST of NO05G05150 vs. NCBI_GenBank
Match: ETO71266.1 (hypothetical protein F444_12369 [Phytophthora parasitica P1976])

HSP 1 Score: 146.7 bits (369), Expect = 2.600e-31
Identity = 161/556 (28.96%), Postives = 260/556 (46.76%), Query Frame = 0
Query:    1 MATSAGVASAASEKLRPLYAALHEAFEEEDHEAALVAATKLLKVAPDEVEARAAKAVA--ELYTGDYALALSTALPAQELERAYALYRLGRGVEALAILDASVLKDEESFR-HLRGQALFKEGRYDEAADVFAALVSEAGANGVEDPELMTNLYAAFVAARRGQEALARFPFSEELMDSCYELAFNTGAAMIDAGDLTAAEARLREARATCVRVGEEDGMTPSALLDEGSGIQIELAYVLAAQGRRGEAFEMVTTLMNKASKLSDPVVRVLAINNAAALREGGRHHKDMSSNLKKMKGPWREAKS-KLLPMQRVLLTLNKALMLMHSGKIDDAKQVLEAVKEEGGKEGGQAWWRVAMLEIAIKMQDDKSRTSSYSPNADLAALLERVRTEAPSADAEKTVGTALAQVLVYQGDLHEAASVLESIASLQGYPAHAATLASLYARLGQKDKSAAVFDKALASFPPFLPPSFK-IKLLQGAAAVRTAQGDHAGAANVLKRLLSGGEDVKEELESDARLRAVAALVVATSWVDVGEAEFLAQKELPAVHLEEGLDAEALE 552
            MAT+    SA +     L AAL    + E++  A+    K+    PD+V+A   K VA   L   D AL L+        E+AY LYRL +  EAL +L+   L+   + + HL  Q  F++G Y+++  ++  L+S A   G +  EL TNL AA+ +A R QE   R    E  +D  +E+AFN     I +GD  AAE  L  A   C    E +G + + + +E + I+ + A+V   +G    A      ++    KL +  V  +A NN   +R+     +D+  + K++K       S KL P Q+  +  N+AL+L    K ++ ++ LE +K++           +A + + + ++D  +           A  +E+++      D        LA V + +G + +AA  + SI  L   P   ATL +LY + G    + AV + ALA        S + +K+ +G    +  +  +  AA+    LL G  +    L+ D RLR++A+LVVA S+ D   AE      LPAV  E G+D   LE
Sbjct:    1 MATAVSADSAVAASFSELNAAL----KRENYTRAVDICNKIRSKFPDDVDAVKVKCVALIRLEKFDKALELAVKYDFLNTEKAYCLYRLKQDDEALKLLEGGDLEALSTAQLHLAAQLHFRQGNYNQSICIYELLLSRA-QEGDDLLELQTNLLAAYASAGRSQELKDR----EIHIDDGFEVAFNKSFVAIQSGDWRAAEELLLTAERLCRDTFEAEGASEAEIEEEVAVIKTQQAFVKQMRGDLDGALSDYRNVLK--LKLRNRAVGAVASNNIVTIRK----DRDVLDSFKRLKNIDASVLSDKLSPAQQEAILTNRALLLCLLNKTEECRESLEVLKKQFPSSKS-----IADIVVLLAIKDQSA-----------AGAIEQLQ-----GDVSVGGRLGLAHVYLTEGQVLKAAECIRSIEQLAHSPGTVATLVALYEQAGDSASAQAVLESALAHHKAGDYTSEQAMKIREGDCWYKIQKKQYREAADAYLELLEG--ETAGALDRDLRLRSMASLVVALSFCDAEAAEARCAM-LPAVE-ESGVDPSELE 516          
BLAST of NO05G05150 vs. NCBI_GenBank
Match: ETI54753.1 (hypothetical protein F443_02484 [Phytophthora parasitica P1569])

HSP 1 Score: 146.4 bits (368), Expect = 3.400e-31
Identity = 161/556 (28.96%), Postives = 260/556 (46.76%), Query Frame = 0
Query:    1 MATSAGVASAASEKLRPLYAALHEAFEEEDHEAALVAATKLLKVAPDEVEARAAKAVA--ELYTGDYALALSTALPAQELERAYALYRLGRGVEALAILDASVLKDEESFR-HLRGQALFKEGRYDEAADVFAALVSEAGANGVEDPELMTNLYAAFVAARRGQEALARFPFSEELMDSCYELAFNTGAAMIDAGDLTAAEARLREARATCVRVGEEDGMTPSALLDEGSGIQIELAYVLAAQGRRGEAFEMVTTLMNKASKLSDPVVRVLAINNAAALREGGRHHKDMSSNLKKMKGPWREAKS-KLLPMQRVLLTLNKALMLMHSGKIDDAKQVLEAVKEEGGKEGGQAWWRVAMLEIAIKMQDDKSRTSSYSPNADLAALLERVRTEAPSADAEKTVGTALAQVLVYQGDLHEAASVLESIASLQGYPAHAATLASLYARLGQKDKSAAVFDKALASFPPFLPPSFK-IKLLQGAAAVRTAQGDHAGAANVLKRLLSGGEDVKEELESDARLRAVAALVVATSWVDVGEAEFLAQKELPAVHLEEGLDAEALE 552
            MAT+    SA +     L AAL    + E++  A+    K+    PD+V+A   K VA   L   D AL L+        E+AY LYRL +  EAL +L+   L+   + + HL  Q  F++G Y+++  ++  L+S A   G +  EL TNL AA+ +A R QE   R    E  +D  +E+AFN     I +GD  AAE  L  A   C    E +G + + + +E + I+ + A+V   +G    A      ++    KL +  V  +A NN   +R+     +D+  + K++K       S KL P Q+  +  N+AL+L    K ++ ++ LE +K++           +A + + + ++D  +           A  +E+++      D        LA V + +G + +AA  + SI  L   P   ATL +LY + G    + AV + ALA        S + +K+ +G    +  +  +  AA+    LL G  +    L+ D RLR++A+LVVA S+ D   AE      LPAV  E G+D   LE
Sbjct:    1 MATAVSADSAVAASFSELNAAL----KRENYTRAVDICNKIRSKFPDDVDAVKVKCVALIRLEKFDKALELAVKYDFLNTEKAYCLYRLKQDDEALKLLEGGDLEALSTAQLHLAAQLHFRQGNYNQSICIYELLLSRA-QEGDDLLELQTNLLAAYASAGRSQELKDR----EIHIDDGFEVAFNKSFVAIQSGDWRAAEELLLTAERLCRDTFEAEGASEAEIGEEVAVIKTQQAFVKQMRGDLDGALSDYRNVLK--LKLRNRAVGAVASNNIVTIRK----DRDVLDSFKRLKNIDASVLSDKLSPAQQEAILTNRALLLCLLNKTEECRESLEVLKKQFPSSKS-----IADIVVLLAIKDQSA-----------AGAIEQLQ-----GDVSVGGRLGLAHVYLTEGQVLKAAECIRSIEQLAHSPGTVATLVALYEQAGDSASAQAVLESALAHHKAGDYTSEQAMKIREGDCWYKIQKKQYREAADAYLELLEG--ETAGALDRDLRLRSMASLVVALSFCDAEAAEARCAM-LPAVE-ESGVDPSELE 516          
BLAST of NO05G05150 vs. NCBI_GenBank
Match: EFX86020.1 (hypothetical protein DAPPUDRAFT_309061 [Daphnia pulex])

HSP 1 Score: 146.0 bits (367), Expect = 4.500e-31
Identity = 152/548 (27.74%), Postives = 263/548 (47.99%), Query Frame = 0
Query:   15 LRPLYAALHEAFEEEDHEAALVAATKLLKVAPDEVEARAAKAVAELYTGDYALALST------ALPAQELERAYALYRLGRGVEALAILDASVLKDEESFRHLRGQALFKEGRYDEAADVFAALVSEAGANGVEDPELMTNLYAAFVAARRGQEALARFPFSEELMDSCYELAFNTGAAMIDAGDLTAAEARLREARATCVRVGEEDGMTPSALLDEGSGIQIELAYVLAAQGRRGEAFEMVTTLMNKASKLSDPVVRVLAINNAAALREGGRHHKDMSSNLKKMKGPWREAKSKLLPMQRVLLTLNKALMLMHSGKIDDAKQVLEAVKEEGGKEGGQAWWRVAMLEIAIKMQDDKSRTSSYSPNADLAALLERVRTEAPS-ADAEKTVGTALAQVLVYQGDLHEAASVLESIASLQGYPAHAATLASLYARLGQKDKSAAVFDKALASFPPFLPPSFKIKLLQGAAAVRTAQGDHAGAANVLKRLLSGGEDVKEELESDARLRAVAALVVATSWVDVGEAEFLAQKELPAVHLEEG---LDAEALEA 553
            L  LY+ L++  +  D+  A+  A K+L+ APDEV A+    V  +   D+   LST         +   E+AY LYRL R  E+LA+L+      E   + L+ Q L++  R+ E  +++  L+     +   + E  TNL +A VA+   +      P S    D  YEL++N    ++  G    AEA+LR+A   C +  EEDG T   + DE + I+++L Y    QGR  E+ +M   ++ +  K SD  +  +A NN+A +  G ++  D    LK  +    E ++K    Q+  L +N+ L L  + + +  ++ +E +K    K+  +    V +L+  ++ + ++              L E + T A S  D+  T G A  Q+L+ + +   A + LE +           +L SL++  GQ+DK+ ++ ++AL  F      + ++KLL+ AAA     G+   AA  L++L         +L+S +    +A LV+  S  D   A+  +Q +LP + L+ G   LD +ALE+
Sbjct:   10 LTALYSELNKFGKNGDYNRAIKVAKKILQEAPDEVNAQHCLVVCYIQESDFKNGLSTINKNAALSDSMTFEKAYCLYRLNRTQESLAVLNKE-NNPEAKHKELKAQVLYRMERFVECLELYKDLIKNTQDD--YEAERETNL-SAVVASLSLEGTKTSLPMSR---DDSYELSYNESIRLLGEGKNAEAEAQLRKAETLCRKSLEEDGATEEEIEDELALIRVQLGYATQLQGRTSESQQMYQMVLKQ--KPSDVALSAIASNNSAVI-NGAQNIFDSRRKLKMTRSTVEENEAKFTTRQKQALAVNQCLFLGATSQAEQCRKAIEELK----KDYPEGIIEVLLLQATLEFKANR--------------LEEALATLASSKPDSALTAGLAALQLLLEKREFDRAITHLEQLLKQHFRLGLLGSLVSLHSARGQRDKAISLVNEALDKFNKTKADN-QVKLLRQAAAFHLKGGEPEKAAACLEQLW--------KLDS-SDTATLARLVLLYSQFDPATAQKKSQ-QLPPLALDAGVGALDVDALES 518          
The following BLAST results are available for this feature:
BLAST of NO05G05150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854352.14.200e-15457.08signal recognition particle subunit SRP72 [Nannoch... [more]
EWM27885.14.200e-15457.08srp72 [Nannochloropsis gaditana][more]
CBJ28999.13.800e-3830.46conserved unknown protein [Ectocarpus siliculosus][more]
XP_008619802.15.500e-3730.73hypothetical protein SDRG_15409 [Saprolegnia dicli... [more]
GAX95721.17.400e-3429.07signal recognition particle, putative [Pythium ins... [more]
XP_012202406.13.700e-3330.63hypothetical protein SPRG_20423 [Saprolegnia paras... [more]
XP_009535069.13.100e-3229.29hypothetical protein PHYSODRAFT_318537 [Phytophtho... [more]
ETO71266.12.600e-3128.96hypothetical protein F444_12369 [Phytophthora para... [more]
ETI54753.13.400e-3128.96hypothetical protein F443_02484 [Phytophthora para... [more]
EFX86020.14.500e-3127.74hypothetical protein DAPPUDRAFT_309061 [Daphnia pu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR078ncniR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003328NSK003328Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G05150.1NO05G05150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|643322gene_10590Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100323g4gene2678Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G05150.1NO05G05150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G05150 ID=NO05G05150|Name=NO05G05150|organism=Nannochloropsis oceanica|type=gene|length=2115bp
ATGGCAACATCGGCAGGGGTAGCCAGCGCCGCGTCGGAGAAGCTTCGGCC
TTTATACGCAGCGCTGCACGAGGCCTTTGAGGAAGAAGACCATGAAGCTG
CCTTGGTCGCTGCCACCAAGCTCCTCAAAGTTGCACCTGATGAGGTCGAG
GCACGGGCAGCCAAGGCAGTGGCCGAGCTTTACACGGGTGACTATGCTCT
CGCCTTGTCCACGGCGTTGCCTGCCCAGGAATTGGAGCGAGCTTATGCCC
TTTATCGGTTGGGGCGAGGCGTCGAAGCCTTGGCCATTCTGGATGCTAGT
GTACTGAAGGATGAGGAGTCTTTCCGGCATCTGCGGGGTCAGGCACTATT
TAAGGAGGGGCGATACGACGAGGCAGCGGATGTCTTTGCAGCGTTGGTGT
CCGAGGCGGGCGCGAATGGAGTGGAAGACCCTGAGTTGATGACAAATCTA
TATGCTGCCTTTGTGGCGGCGCGACGGGGCCAGGAAGCCCTGGCACGCTT
TCCTTTTAGCGAAGAACTGATGGATTCGTGCTACGAGCTTGCGTTCAACA
CGGGGGCCGCCATGATCGATGCAGGGGATCTCACAGCGGCGGAAGCGAGG
CTGCGCGAGGCGCGGGCGACGTGTGTGCGTGTGGGGGAGGAGGATGGGAT
GACCCCGTCGGCATTATTGGACGAAGGGAGCGGGATCCAGATTGAGCTGG
CGTATGTCCTGGCGGCGCAGGGGAGGCGAGGAGAGGCGTTTGAGATGGTG
ACGACGTTGATGAACAAGGCAAGCAAGCTTTCGGACCCCGTGGTGCGTGT
CCTGGCGATAAACAATGCAGCGGCCTTGAGGGAGGGGGGAAGGCACCACA
AGGATATGAGCAGCAACCTGAAGAAGATGAAAGGGCCGTGGAGGGAGGCC
AAAAGCAAGCTACTGCCCATGCAACGCGTGCTCTTGACGTTGAACAAGGC
GCTGATGCTCATGCACTCTGGCAAGATCGACGATGCCAAGCAGGTCCTAG
AGGCGGTCAAGGAGGAGGGTGGGAAGGAGGGAGGGCAGGCTTGGTGGCGG
GTGGCCATGCTGGAAATCGCCATCAAAATGCAAGACGATAAATCGCGTAC
TTCGTCCTACTCCCCCAACGCAGATTTGGCGGCTTTGCTGGAACGCGTGC
GTACTGAAGCCCCCTCTGCCGATGCGGAGAAGACCGTTGGGACGGCCCTC
GCTCAAGTTCTCGTCTACCAAGGCGACCTCCACGAAGCGGCTTCTGTCCT
GGAATCGATCGCTTCTCTTCAGGGCTACCCTGCCCATGCTGCCACTTTGG
CATCGCTGTACGCCAGACTCGGCCAAAAGGATAAGAGTGCCGCTGTCTTT
GACAAAGCTCTGGCCTCCTTCCCTCCCTTTCTCCCTCCCTCTTTTAAAAT
CAAACTTCTACAAGGAGCGGCGGCGGTGCGAACGGCGCAAGGGGATCATG
CAGGAGCAGCCAATGTGTTGAAGCGCTTATTGTCGGGAGGGGAGGACGTC
AAGGAGGAACTGGAGAGTGACGCACGCCTCCGGGCAGTGGCTGCACTGGT
GGTGGCTACCTCGTGGGTGGATGTCGGAGAAGCCGAATTTCTCGCACAGA
AGGAGCTACCGGCTGTTCACCTGGAAGAAGGGCTTGATGCCGAGGCCTTG
GAGGCCCACGGCTTGCCCAGAAGGCGGTCGTCGCTGGCGGGGCTGCGGCG
GACCTCCCTCCCTACCTCTGCAGCAGGAGCAGCAGCAGGGGGAGGGGGAG
GAGGAGCACCTCAAGAGCAAGAGCAAGAGCAACGGCAGCCAAAGAAGAAG
AACCCAGAGGCCATCAAGCGGAGACGCGCCCGGGCCCGTGCCGCCTATCT
TGCCGAACTGGCAGCCGCAGGGAAATACGACGCTGCCCGCCCAGGACCCC
CCCGGACCCTGAGCGGTGGATCGCCAAAAGCCAGAGGTCGTACAACAAGA
GGGGAAAGAAGGGCAGGAGCCGGTTTGTGGGCGCGCAGGGATCCGGGGAT
GGTGCGCAGAAGGATACAGCGAGATTGGACGTGGCATCGCGGGTGGCAGC
GGAGAAGAAAAAGGGAGGGGGGGAGTTGGAGAAGGGGGGCGCGACGGGGG
GAGCTGGTGGGGTGA
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protein sequence of NO05G05150.1

>NO05G05150.1-protein ID=NO05G05150.1-protein|Name=NO05G05150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=705bp
MATSAGVASAASEKLRPLYAALHEAFEEEDHEAALVAATKLLKVAPDEVE
ARAAKAVAELYTGDYALALSTALPAQELERAYALYRLGRGVEALAILDAS
VLKDEESFRHLRGQALFKEGRYDEAADVFAALVSEAGANGVEDPELMTNL
YAAFVAARRGQEALARFPFSEELMDSCYELAFNTGAAMIDAGDLTAAEAR
LREARATCVRVGEEDGMTPSALLDEGSGIQIELAYVLAAQGRRGEAFEMV
TTLMNKASKLSDPVVRVLAINNAAALREGGRHHKDMSSNLKKMKGPWREA
KSKLLPMQRVLLTLNKALMLMHSGKIDDAKQVLEAVKEEGGKEGGQAWWR
VAMLEIAIKMQDDKSRTSSYSPNADLAALLERVRTEAPSADAEKTVGTAL
AQVLVYQGDLHEAASVLESIASLQGYPAHAATLASLYARLGQKDKSAAVF
DKALASFPPFLPPSFKIKLLQGAAAVRTAQGDHAGAANVLKRLLSGGEDV
KEELESDARLRAVAALVVATSWVDVGEAEFLAQKELPAVHLEEGLDAEAL
EAHGLPRRRSSLAGLRRTSLPTSAAGAAAGGGGGGAPQEQEQEQRQPKKK
NPEAIKRRRARARAAYLAELAAAGKYDAARPGPPRTLSGGSPKARGRTTR
GERRAGAGLWARRDPGMVRRRIQRDWTWHRGWQRRRKREGGSWRRGARRG
ELVG*
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Synonyms
Publications