jgi.p|Nanoce1779_2|643322, gene_10590 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|643322
Unique Namegene_10590
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_56:59415..61562 +

Link to JBrowse

Properties
Property NameValue
TranscriptId643408
ProteinId643322
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_56supercontigscaffold_56:59415..61562 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL078ncniL078Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G05150NO05G05150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|643322mRNA_10590-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|643322mRNA_10590Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|643322

>mRNA_10590-protein ID=mRNA_10590-protein|Name=jgi.p|Nanoce1779_2|643322|organism=Nannochloropsis oceanica|type=polypeptide|length=716bp
MATSAGVASAASEKLRPLYAALHEAFEEEDHEAALVAATKLLKVAPDEVE
ARAAKAVAELYTGDYALALSTALPAQELERAYALYRLGRGVEALAILDAS
VLKDEESFRHLRGQALFKEGRYDEAADVFAALVSEAGANGVEDPELMTNL
YAAFVAARRGQEALARFPFSEELMDSCYELAFNTGAAMIDAGDLTAAEAR
LREARATCVRVGEEDGMTPSALLDEGSGIQIELAYVLAAQGRRGEAFEMV
TTLMNKASKLSDPVVRVLAINNAAALREGGRHHKDMSSNLKKMKGPWREA
KSKLLPMQRVLLTLNKALMLMHSGKIDDAKQVLEAVKEEGGKEGGQAWWR
VAMLEIAIKMQDDKSRTSSYSPNADLAALLERVRTEAPSADAEKTVGTAL
AQVLVYQGDLHEAASVLESIASLQGYPAHAATLASLYARLGQKDKSAAVF
DKALASFPPFLPPSFKIKLLQGAAAVRTAQGDHAGAANVLKRLLSGGEDV
KEELESDARLRAVAALVVATSWVDVGEAEFLAQKELPAVHLEEGLDAEAL
EAHGLPRRRSSLAGLRRTSLPTSAAGAAAGGGGGGAPQEQEQEQRQPKKK
NPEAIKRRRARARAAYLAELAAAGKYDAARPGPPPDPERWIAKSQRSYNK
RGKKGRSRFVGAQGSGDGAQKDTARLDVASRVAAEKKKGGGELEKGGATG
GAGGVKMAGGRRRKK*
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Synonyms
Publications