NO05G04800, NO05G04800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G04800 vs. NCBI_GenBank
Match: XP_005854934.1 (hypothetical protein NGA_0388400 [Nannochloropsis gaditana CCMP526] >EKU21422.1 hypothetical protein NGA_0388400 [Nannochloropsis gaditana CCMP526] >EWM27921.1 Methyltransferase type 11 [Nannochloropsis gaditana]) HSP 1 Score: 409.1 bits (1050), Expect = 9.600e-111 Identity = 200/237 (84.39%), Postives = 217/237 (91.56%), Query Frame = 0 Query: 1 MRALQRFTQTASCLCVIPASAFVSGFVRPPPRNSCS-MASSASATRRGLTTMNIKPADVLKDPKWPEEAFFRATDFQRQDESTDTSFYSSPRFVTHIDDPAIKALTDYYAVAFPPNAEVLDICSSWISHYPEGAKRKRTVGMGMNEAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIKPLEVFAEISRVLKPGGLCIMSMSNRCFPTKAISIWLETGDAGHVFIV 237 MR+LQ +++ ASC C +P +AF++ P SCS +ASS S+TRRGLTTMN+K ADVLKDPKWPEE FFR TD+QRQDES+DTSFYSSPRFVTHIDDPAIKALTDYYAV FPPNAEVLDICSSWISHYPEGAKRKRTVGMGMN+AELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLI+PLEVFAEI+RVLKPGG CIMSMSNRCFPTKA+SIWLETGDAGHVFIV Sbjct: 1 MRSLQHWSRAASCFCALPVTAFIA----PTFSQSCSDVASSPSSTRRGLTTMNVKIADVLKDPKWPEEPFFRPTDWQRQDESSDTSFYSSPRFVTHIDDPAIKALTDYYAVTFPPNAEVLDICSSWISHYPEGAKRKRTVGMGMNKAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIRPLEVFAEIARVLKPGGTCIMSMSNRCFPTKAVSIWLETGDAGHVFIV 233
BLAST of NO05G04800 vs. NCBI_GenBank
Match: KXZ45829.1 (hypothetical protein GPECTOR_50g623 [Gonium pectorale]) HSP 1 Score: 253.1 bits (645), Expect = 8.800e-64 Identity = 122/183 (66.67%), Postives = 140/183 (76.50%), Query Frame = 0 Query: 58 VLKDPKWPEEAFFRATDFQRQDESTDTSFYSSPRFVTHIDDPAIKALTDYYAVAFPP----NAEVLDICSSWISHYPEGAKRKRTVGMGMNEAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIKPLEVFAEISRVLKPGGLCIMSMSNRCFPTKAISIWLETGDAGHVFIV 237 VL+DP+WPE+ FR +F R DES DT FYS PRFVTHIDD AIKALT +Y FPP + VLDICSSW+SHYPEG K R G+GMNE ELA+N QL E+ VKDLNVDPTLP+ D +FDV+T VSVDYL KPLE+F E+ RVLKPGG MS SNRCFPTKAIS+W TGDA H++IV Sbjct: 4 VLEDPRWPEKWPFRPENFLRYDESPDTYFYSQPRFVTHIDDQAIKALTKFYGAVFPPSGGQSTAVLDICSSWVSHYPEGYKAGRVAGLGMNEEELARNPQLTEFAVKDLNVDPTLPYGDNTFDVITNCVSVDYLNKPLEIFKEMHRVLKPGGTAYMSFSNRCFPTKAISLWTATGDADHIWIV 186
BLAST of NO05G04800 vs. NCBI_GenBank
Match: XP_015966393.1 (uncharacterized protein LOC107490140 isoform X1 [Arachis duranensis]) HSP 1 Score: 252.3 bits (643), Expect = 1.500e-63 Identity = 135/251 (53.78%), Postives = 168/251 (66.93%), Query Frame = 0 Query: 10 TASCLCVIPASAFV-------SGFVRPPPR--------NSCSMASSA-SATRRGLTTMNIKPA----DVLKDPKWPEEAFFRATDFQRQDESTDTSFYSSPRFVTHIDDPAIKALTDYYAVAFPPN----AEVLDICSSWISHYPEGAKRKRTVGMGMNEAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIKPLEVFAEISRVLKPGGLCIMSMSNRCFPTKAISIWLETGDAGHVFIV 237 + SC C + + GFV+ PR + MASSA ++ + + I P ++LK+ +WPE+ F+ DFQR DES+D FY +PRFVTHIDDPAI ALT YY+V FPP+ +LD+CSSW+SH+P G K++R VG+GMNE EL +N L EYVV+DLNV+P LPF D SFDV+T VVSVDYL KPL+VF E+ R+LKPGGL IMS SNRCF TKAISIW TGDA HV IV Sbjct: 52 SCSCSCFSKRAQIILLKKWDKGGFVKAYPRRMVLGIGASFLGMASSAFQGSKSFIASARINPGPSVNEILKNVEWPEQFPFKDEDFQRFDESSDALFYDAPRFVTHIDDPAIAALTKYYSVVFPPSNTPGVSILDMCSSWVSHFPPGYKQERVVGLGMNEEELKRNPVLTEYVVQDLNVNPKLPFEDSSFDVITNVVSVDYLTKPLDVFKEMRRILKPGGLAIMSFSNRCFWTKAISIWTSTGDADHVMIV 302
BLAST of NO05G04800 vs. NCBI_GenBank
Match: XP_015966394.1 (uncharacterized protein LOC107490140 isoform X2 [Arachis duranensis]) HSP 1 Score: 251.5 bits (641), Expect = 2.600e-63 Identity = 127/209 (60.77%), Postives = 155/209 (74.16%), Query Frame = 0 Query: 37 MASSA-SATRRGLTTMNIKPA----DVLKDPKWPEEAFFRATDFQRQDESTDTSFYSSPRFVTHIDDPAIKALTDYYAVAFPPN----AEVLDICSSWISHYPEGAKRKRTVGMGMNEAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIKPLEVFAEISRVLKPGGLCIMSMSNRCFPTKAISIWLETGDAGHVFIV 237 MASSA ++ + + I P ++LK+ +WPE+ F+ DFQR DES+D FY +PRFVTHIDDPAI ALT YY+V FPP+ +LD+CSSW+SH+P G K++R VG+GMNE EL +N L EYVV+DLNV+P LPF D SFDV+T VVSVDYL KPL+VF E+ R+LKPGGL IMS SNRCF TKAISIW TGDA HV IV Sbjct: 12 MASSAFQGSKSFIASARINPGPSVNEILKNVEWPEQFPFKDEDFQRFDESSDALFYDAPRFVTHIDDPAIAALTKYYSVVFPPSNTPGVSILDMCSSWVSHFPPGYKQERVVGLGMNEEELKRNPVLTEYVVQDLNVNPKLPFEDSSFDVITNVVSVDYLTKPLDVFKEMRRILKPGGLAIMSFSNRCFWTKAISIWTSTGDADHVMIV 220
BLAST of NO05G04800 vs. NCBI_GenBank
Match: CBJ25479.1 (B1142C05.17 [Ectocarpus siliculosus]) HSP 1 Score: 250.4 bits (638), Expect = 5.700e-63 Identity = 127/205 (61.95%), Postives = 145/205 (70.73%), Query Frame = 0 Query: 32 RNSCSMASSASATRRGLTTMNIKPADVLKDPKWPEEAFFRATDFQRQDESTDTSFYSSPRFVTHIDDPAIKALTDYYAVAFPPNAEVLDICSSWISHYPEGAKRKRTVGMGMNEAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIKPLEVFAEISRVLKPGGLCIMSMSNRCFPTKAISIWLETGDAGHVFIV 237 RN S A +T + + +VLK PKWPE+ F DF R DES+D FYS PR V HIDD A+KALT YYA A P A+VLDICSSW+SH+P+ + + G+GMNE EL+KN QLDEY VKDLNVD PF D SFDVVTCVVSVDYL KPLEVF EI RVL+PGG IMSMSNRCFPTKAI IW +T D H+FIV Sbjct: 37 RNFVSATRPAGSTAL-FASGGVSAEEVLKAPKWPEKWPFYEDDFSRMDESSDGDFYSQPRLVYHIDDSAVKALTKYYAKALPKGADVLDICSSWVSHFPKDWEHGKRTGLGMNEFELSKNVQLDEYKVKDLNVDAKFPFEDNSFDVVTCVVSVDYLNKPLEVFNEIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIV 240
BLAST of NO05G04800 vs. NCBI_GenBank
Match: XP_001698058.1 (ubiquinone/menaquinone biosynthesis methyltransferase-like protein [Chlamydomonas reinhardtii]) HSP 1 Score: 250.0 bits (637), Expect = 7.400e-63 Identity = 122/183 (66.67%), Postives = 140/183 (76.50%), Query Frame = 0 Query: 58 VLKDPKWPEEAFFRATDFQRQDESTDTSFYSSPRFVTHIDDPAIKALTDYYAVAFPPN----AEVLDICSSWISHYPEGAKRKRTVGMGMNEAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIKPLEVFAEISRVLKPGGLCIMSMSNRCFPTKAISIWLETGDAGHVFIV 237 VL DP+WPE+ FR +F R DE+ DT FYS PRFVTHIDD AIKALT +Y FPP+ A VLDICSSW+SHYPEG K R G+GMNE+ELA+N QL E+ VKDLNVDP LP+ D SFDV+T VSVDYL KPLE+F E+ RVLKPGG MS SNRCFPTKAI++W TGDA HV+IV Sbjct: 87 VLDDPRWPEQFPFRPENFARYDETPDTYFYSQPRFVTHIDDGAIKALTKFYGEVFPPSGTQTAAVLDICSSWVSHYPEGYKAGRVAGLGMNESELARNVQLTEFSVKDLNVDPRLPYEDNSFDVITNCVSVDYLNKPLEIFREMHRVLKPGGTAYMSFSNRCFPTKAIALWTATGDADHVWIV 269
BLAST of NO05G04800 vs. NCBI_GenBank
Match: XP_016203837.1 (uncharacterized protein LOC107644486 isoform X1 [Arachis ipaensis]) HSP 1 Score: 250.0 bits (637), Expect = 7.400e-63 Identity = 134/251 (53.39%), Postives = 167/251 (66.53%), Query Frame = 0 Query: 10 TASCLCVIPASAFV-------SGFVRPPPR--------NSCSMASSA-SATRRGLTTMNIKPA----DVLKDPKWPEEAFFRATDFQRQDESTDTSFYSSPRFVTHIDDPAIKALTDYYAVAFPPN----AEVLDICSSWISHYPEGAKRKRTVGMGMNEAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIKPLEVFAEISRVLKPGGLCIMSMSNRCFPTKAISIWLETGDAGHVFIV 237 + SC C + + GFV+ PR + MASSA ++ + + I P ++LK+ +WPE+ F+ DFQR DES+D FY +PRFVTHIDDPAI ALT YY+ FPP+ +LD+CSSW+SH+P G K++R VG+GMNE EL +N L EYVV+DLNV+P LPF D SFDV+T VVSVDYL KPL+VF E+ R+LKPGGL IMS SNRCF TKAISIW TGDA HV IV Sbjct: 52 SCSCSCFSKRAQIILLKKWDKGGFVKAYPRRMVLGIGASFLGMASSAFQGSKSFIASARINPGPSVNEILKNVEWPEQFPFKDEDFQRFDESSDALFYDAPRFVTHIDDPAIAALTKYYSEVFPPSNTPGVSILDMCSSWVSHFPPGYKQERVVGLGMNEEELKRNPVLTEYVVQDLNVNPKLPFEDNSFDVITNVVSVDYLTKPLDVFKEMRRILKPGGLAIMSFSNRCFWTKAISIWTSTGDADHVMIV 302
BLAST of NO05G04800 vs. NCBI_GenBank
Match: PNW82348.1 (hypothetical protein CHLRE_06g278236v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 250.0 bits (637), Expect = 7.400e-63 Identity = 122/183 (66.67%), Postives = 140/183 (76.50%), Query Frame = 0 Query: 58 VLKDPKWPEEAFFRATDFQRQDESTDTSFYSSPRFVTHIDDPAIKALTDYYAVAFPPN----AEVLDICSSWISHYPEGAKRKRTVGMGMNEAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIKPLEVFAEISRVLKPGGLCIMSMSNRCFPTKAISIWLETGDAGHVFIV 237 VL DP+WPE+ FR +F R DE+ DT FYS PRFVTHIDD AIKALT +Y FPP+ A VLDICSSW+SHYPEG K R G+GMNE+ELA+N QL E+ VKDLNVDP LP+ D SFDV+T VSVDYL KPLE+F E+ RVLKPGG MS SNRCFPTKAI++W TGDA HV+IV Sbjct: 43 VLDDPRWPEQFPFRPENFARYDETPDTYFYSQPRFVTHIDDGAIKALTKFYGEVFPPSGTQTAAVLDICSSWVSHYPEGYKAGRVAGLGMNESELARNVQLTEFSVKDLNVDPRLPYEDNSFDVITNCVSVDYLNKPLEIFREMHRVLKPGGTAYMSFSNRCFPTKAIALWTATGDADHVWIV 225
BLAST of NO05G04800 vs. NCBI_GenBank
Match: XP_016203838.1 (uncharacterized protein LOC107644486 isoform X2 [Arachis ipaensis]) HSP 1 Score: 249.2 bits (635), Expect = 1.300e-62 Identity = 126/209 (60.29%), Postives = 154/209 (73.68%), Query Frame = 0 Query: 37 MASSA-SATRRGLTTMNIKPA----DVLKDPKWPEEAFFRATDFQRQDESTDTSFYSSPRFVTHIDDPAIKALTDYYAVAFPPN----AEVLDICSSWISHYPEGAKRKRTVGMGMNEAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIKPLEVFAEISRVLKPGGLCIMSMSNRCFPTKAISIWLETGDAGHVFIV 237 MASSA ++ + + I P ++LK+ +WPE+ F+ DFQR DES+D FY +PRFVTHIDDPAI ALT YY+ FPP+ +LD+CSSW+SH+P G K++R VG+GMNE EL +N L EYVV+DLNV+P LPF D SFDV+T VVSVDYL KPL+VF E+ R+LKPGGL IMS SNRCF TKAISIW TGDA HV IV Sbjct: 12 MASSAFQGSKSFIASARINPGPSVNEILKNVEWPEQFPFKDEDFQRFDESSDALFYDAPRFVTHIDDPAIAALTKYYSEVFPPSNTPGVSILDMCSSWVSHFPPGYKQERVVGLGMNEEELKRNPVLTEYVVQDLNVNPKLPFEDNSFDVITNVVSVDYLTKPLDVFKEMRRILKPGGLAIMSFSNRCFWTKAISIWTSTGDADHVMIV 220
BLAST of NO05G04800 vs. NCBI_GenBank
Match: XP_024371384.1 (uncharacterized protein LOC112280289 [Physcomitrella patens] >PNR57599.1 hypothetical protein PHYPA_004593 [Physcomitrella patens]) HSP 1 Score: 248.8 bits (634), Expect = 1.700e-62 Identity = 119/184 (64.67%), Postives = 141/184 (76.63%), Query Frame = 0 Query: 57 DVLKDPKWPEEAFFRATDFQRQDESTDTSFYSSPRFVTHIDDPAIKALTDYYAVAFPPN----AEVLDICSSWISHYPEGAKRKRTVGMGMNEAELAKNKQLDEYVVKDLNVDPTLPFCDESFDVVTCVVSVDYLIKPLEVFAEISRVLKPGGLCIMSMSNRCFPTKAISIWLETGDAGHVFIV 237 +VLK +WPE+ F DF R DES DT FY +PRFVTHIDDPAI+ALT YY+ A PP+ +LD+CSSWISHYP+G K++R G+G+NE EL +N+ L EYVV+DLN+DPTLP+ D SFDV+T VVSVDYL KPLE+F E+ RVLKPGGL MS SNRCF TKAISIW TGD HV IV Sbjct: 95 EVLKKVQWPEQFPFTKEDFARYDESPDTVFYDAPRFVTHIDDPAIRALTRYYSTALPPSNTPGTAILDMCSSWISHYPKGYKQERIAGLGLNEEELKRNEVLTEYVVRDLNIDPTLPYADNSFDVITNVVSVDYLTKPLEIFKEMHRVLKPGGLAAMSFSNRCFFTKAISIWTSTGDVDHVMIV 278 The following BLAST results are available for this feature:
BLAST of NO05G04800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G04800 ID=NO05G04800|Name=NO05G04800|organism=Nannochloropsis oceanica|type=gene|length=1436bpback to top protein sequence of NO05G04800.1 >NO05G04800.1-protein ID=NO05G04800.1-protein|Name=NO05G04800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=280bpback to top protein sequence of NO05G04800.2 >NO05G04800.2-protein ID=NO05G04800.2-protein|Name=NO05G04800.2|organism=Nannochloropsis oceanica|type=polypeptide|length=237bpback to top protein sequence of NO05G04800.3 >NO05G04800.3-protein ID=NO05G04800.3-protein|Name=NO05G04800.3|organism=Nannochloropsis oceanica|type=polypeptide|length=223bpback to top Synonyms
Publications
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