NO05G03920, NO05G03920 (gene) Nannochloropsis oceanica

Overview
NameNO05G03920
Unique NameNO05G03920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1359
Alignment locationchr5:1013554..1014912 +

Link to JBrowse

Properties
Property NameValue
DescriptionEukaryotic translation initiation factor 5
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1013554..1014912 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003743translation initiation factor activity
GO:0005515protein binding
GO:0008135translation factor activity, RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: INTERPRO
TermDefinition
IPR016189Transl_init_fac_IF2/IF5_N
IPR016190Transl_init_fac_IF2/IF5_Zn-bd
IPR016024ARM-type_fold
IPR002735Transl_init_fac_IF2/IF5
IPR003307W2_domain
Homology
BLAST of NO05G03920 vs. NCBI_GenBank
Match: EWM28016.1 (eukaryotic translation initiation factor 5 [Nannochloropsis gaditana])

HSP 1 Score: 502.3 bits (1292), Expect = 1.600e-138
Identity = 369/432 (85.42%), Postives = 398/432 (92.13%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEA 433
            MNIAGLNP+EDANYRYKMPRILAKVEGRGNGIKTVVINMK+VA ALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAH+APALQ  LCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKA+K+GK     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +VA +DNLAVEDATA A A+GRL+ FL+++P A A+Q+L+E+RMIATFSAL +E+R FLFVQAAFGP+A ++N + +H KVLKGL+L+VD E YQRRLIGV+EHLCAVTH E+L K FP+LLKQLYDE VVDEEVFLEWAEEEGPTEFTRREV+  MVE LR EA KFVTWL EA
Sbjct:    2 MNIAGLNPVEDANYRYKMPRILAKVEGRGNGIKTVVINMKEVAQALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHTAPALQTSLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKAAKEGKG--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVARLDNLAVEDATALAGAIGRLQHFLNSNPSAGASQILEEIRMIATFSALPVEERPFLFVQAAFGPEAGRENAIRRHQKVLKGLMLSVDEEMYQRRLIGVMEHLCAVTHAESLHKWFPVLLKQLYDEGVVDEEVFLEWAEEEGPTEFTRREVTPAMVESLRKEAGKFVTWLTEA 431          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: XP_008893151.1 (hypothetical protein PPTG_01569 [Phytophthora parasitica INRA-310] >ETI45304.1 hypothetical protein F443_10089 [Phytophthora parasitica P1569] >ETK85260.1 hypothetical protein L915_09880 [Phytophthora parasitica] >ETL38685.1 hypothetical protein L916_09789 [Phytophthora parasitica] >ETL91808.1 hypothetical protein L917_09707 [Phytophthora parasitica] >ETM45102.1 hypothetical protein L914_09756 [Phytophthora parasitica] >ETN21350.1 hypothetical protein PPTG_01569 [Phytophthora parasitica INRA-310] >ETO73942.1 hypothetical protein F444_10186 [Phytophthora parasitica P1976] >ETP15118.1 hypothetical protein F441_10029 [Phytophthora parasitica CJ01A1] >ETP43180.1 hypothetical protein F442_10000 [Phytophthora parasitica P10297] >KUF78389.1 eukaryotic translation initiation factor 5-1 [Phytophthora nicotianae] >KUF99974.1 eukaryotic translation initiation factor 5-1 [Phytophthora nicotianae])

HSP 1 Score: 258.5 bits (659), Expect = 4.000e-65
Identity = 244/439 (55.58%), Postives = 302/439 (68.79%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKD-----GKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLS-AHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            MNIAG  P++D  YRYKMPR+ AK+EGRGNGIKT+V+N  D+A++LHR  AEV KFFG ELGAQ+ Y E+T+RA+VNGA  A  +Q  L +YI+GFVLCP C LPET YK KG +I+ KC ACG     DM+HKLTTFI   H  A +             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXXXX E+VAT+DNL V+D  A  +AV  L++FLS +H E    ++ +E+    T+SAL + DRL +F ++AF       N V K+  VL+ +I   D +  Q +L+ + EH CAV H E LL  +P+LLK LYDE++++EE  + WA      E+    V++E+   L+   + F+ WL+ AE
Sbjct:    4 MNIAGTQPVDDPEYRYKMPRLQAKIEGRGNGIKTLVVNCADIATSLHRSTAEVCKFFGCELGAQSKYDEKTDRAIVNGAFDAGMMQQHLSKYIEGFVLCPGCRLPETKYKFKGQLIFHKCYACGAVEPVDMNHKLTTFIFKEHTAAKRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVWHTDLSAEAVAXXXXXXXXXXXXXXXXXXXXXXXEVVATLDNLQVDDENALDSAVSNLQRFLSESHSE---TEIFEELCRQQTYSALPVTDRLVIFFRSAFTEQVLASNQVAKYAPVLEKII---DGQHSQYQLLALAEHFCAVEHPE-LLSSYPILLKLLYDEDLLEEECLVAWANNGVRKEYAHWAVTDELAAKLKALLQPFIEWLENAE 435          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: CCA27172.1 (eukaryotic translation initiation factor 5 putative [Albugo laibachii Nc14])

HSP 1 Score: 255.0 bits (650), Expect = 4.400e-64
Identity = 209/433 (48.27%), Postives = 268/433 (61.89%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            MNIAG  P++D  YRYKMPR++ K+EGRGNGIKT+V+N  DVA++LHR  AEV KFFGTELGAQ+ Y E+T+RA+VNGA     +Q  L +YI+GFVLCP C LPE+ YK KG  I+ KC ACG     DM+HKLTTFI+  H  A + GK          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                        GE+VAT+D+L V D  A   A+ +L  F+ + P  T   + DE+  + T++ALSI DRL +  +A+F      +N V K V +L  L   V ++  Q RLI + EH+CA+ + E ++  FP+LLK LYDE+++DEE    W + +   ++    VS++    L+   + F  WL+ AE
Sbjct:    4 MNIAGTQPVDDPEYRYKMPRLITKIEGRGNGIKTLVVNCHDVATSLHRSTAEVCKFFGTELGAQSKYDEKTDRAIVNGAFEVGMMQTHLSKYIEGFVLCPGCRLPESKYKFKGQSIFHKCYACGAVEPVDMNHKLTTFIMKEHTAAKRAGK----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVEWHTDLSPEAVAARAAEAEAIEAGARAAMVNGSHTNGEGEIVATLDHLQVHDEDALELAITKLSMFMESEP--TTDAIHDELCRLQTYAALSISDRLVIVFRASFDDQFVAKNQVSKSVSILGKL---VTSQHDQYRLIALCEHMCAMKYPE-IISQFPVLLKLLYDEDLIDEECLFGWLKTDIRKQYADPIVSDDSNAKLKQHLQVFTDWLENAE 420          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: XP_002907928.1 (eukaryotic translation initiation factor 5, putative [Phytophthora infestans T30-4] >EEY61011.1 eukaryotic translation initiation factor 5, putative [Phytophthora infestans T30-4])

HSP 1 Score: 252.7 bits (644), Expect = 2.200e-63
Identity = 241/436 (55.28%), Postives = 299/436 (68.58%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTH--KKASKDGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLS-AHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            MNIAG   ++D  YRYKMPR+ AK+EGRGNGIKT+V+N  D+A++LHR  AEV KFFG ELGAQ+ Y E+T+RA+VNGA  A  +Q  L +YI+GFVLCP C LPET YK KG +I+ KC ACG     DM+HKLTTFI   H   K S         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              XXXXXXXXXXXXXXXXXXXXX   VAT+DNL V+D  A  +AV  L++FL+ +H E   +++ +E+    T+SAL + DRL +F ++AF       N V K+  VL+ +I   D +  Q +L+ + EH CAV H E LL  +P+LLK LYDE++++EE  + WA      E+    V++E+   L+   + F+ WL+ AE
Sbjct:    4 MNIAGTQSVDDPEYRYKMPRLQAKIEGRGNGIKTLVVNCADIATSLHRSTAEVCKFFGCELGAQSKYDEKTDRAIVNGAFEAGMMQQHLIKYIEGFVLCPGCRLPETKYKFKGQLIFHKCYACGAVEPVDMNHKLTTFIFKEHTAAKRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVWHTDLSAEAVAAXXXXXXXXXXXXXXXXXXXXXXXXVATLDNLQVDDENALDSAVSNLQRFLTESHAE---SEIFEELCRQQTYSALPVTDRLVIFFRSAFTNQVLASNQVAKYAPVLEKII---DGQHSQYQLLALAEHFCAVEHPE-LLSSYPILLKLLYDEDLLEEECLVAWANNGVRKEYAHWAVTDELAAKLKALLQPFIEWLENAE 432          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: CCI49784.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 252.7 bits (644), Expect = 2.200e-63
Identity = 219/433 (50.58%), Postives = 274/433 (63.28%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            MNIAG  P+ED  YRYKMPR++ K+EGRGNGIKT+V+N  DVA++LHR  AEV KFFGTELGAQ+ Y ++T+RA+VNGA     +Q  L +YI+ FVLCP C LPE+ YK KG  I+ KC ACG     DM+HKLTTFI+  H  A + G             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXX                ELVAT+DNL V+D  A   A  +L  F+   PE T   + +E+  + T +ALS+ DRL +F +AAF      +N V K V +L+ L   V ++  Q RLI + EH+CAV +   + + FP+LLK LYD++++DEE    W + E   ++    VS+     L+   + F  WL+ AE
Sbjct:    4 MNIAGTQPVEDPEYRYKMPRLITKIEGRGNGIKTLVVNCHDVATSLHRSTAEVCKFFGTELGAQSKYDDKTDRAIVNGAFEVGMMQTHLSKYIESFVLCPGCRLPESKYKFKGQTIFHKCYACGAVEPVDMNHKLTTFILKEHTAAKRAG-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWHTDLSPEAVAARXXXXXXXXXGARAAMVNGNHGNGENELVATLDNLQVDDEDALELATTKLSMFM--EPEPTTDAIYEELCRLQTNAALSVSDRLVIFFRAAFDDQFVAKNRVSKSVPILRKL---VTSQHDQYRLIALCEHMCAVQYPGIIFQ-FPVLLKLLYDDDLIDEECLFGWLKNEIRKQYADPIVSDNSYAKLKQHLQVFTDWLENAE 417          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: CCI49785.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 252.7 bits (644), Expect = 2.200e-63
Identity = 219/433 (50.58%), Postives = 274/433 (63.28%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            MNIAG  P+ED  YRYKMPR++ K+EGRGNGIKT+V+N  DVA++LHR  AEV KFFGTELGAQ+ Y ++T+RA+VNGA     +Q  L +YI+ FVLCP C LPE+ YK KG  I+ KC ACG     DM+HKLTTFI+  H  A + G             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXX                ELVAT+DNL V+D  A   A  +L  F+   PE T   + +E+  + T +ALS+ DRL +F +AAF      +N V K V +L+ L   V ++  Q RLI + EH+CAV +   + + FP+LLK LYD++++DEE    W + E   ++    VS+     L+   + F  WL+ AE
Sbjct:    1 MNIAGTQPVEDPEYRYKMPRLITKIEGRGNGIKTLVVNCHDVATSLHRSTAEVCKFFGTELGAQSKYDDKTDRAIVNGAFEVGMMQTHLSKYIESFVLCPGCRLPESKYKFKGQTIFHKCYACGAVEPVDMNHKLTTFILKEHTAAKRAG-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWHTDLSPEAVAARXXXXXXXXXGARAAMVNGNHGNGENELVATLDNLQVDDEDALELATTKLSMFM--EPEPTTDAIYEELCRLQTNAALSVSDRLVIFFRAAFDDQFVAKNRVSKSVPILRKL---VTSQHDQYRLIALCEHMCAVQYPGIIFQ-FPVLLKLLYDDDLIDEECLFGWLKNEIRKQYADPIVSDNSYAKLKQHLQVFTDWLENAE 414          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: OWZ15329.1 (Eukaryotic translation initiation factor 5 [Phytophthora megakarya])

HSP 1 Score: 250.8 bits (639), Expect = 8.300e-63
Identity = 241/436 (55.28%), Postives = 298/436 (68.35%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTH--KKASKDGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLS-AHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            MNIAG   ++D  YRYKMPR+ AK+EGRGNGIKT+V+N  D+A++LHR  AEV KFFG ELGAQ+ Y E+T+RA+VNGA  A  +Q  L +YI+GFVLCP C LPET YK KG +IY KC ACG     DM+HKLTTFI   H   K S         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              XXXXXXXXXXXXXXXXXXXXX  +VAT+DNL V+D  A  +AV  L++FLS +H E     + +E+    T+SAL + DRL +F ++AF       N + K+  VL+ +I   + +  Q +L+ + EH CAV + E LL  +P+LLK LYDEE+++EE  + WA +    E+    V++ +   L+   + FV WL+ AE
Sbjct:    4 MNIAGTQSVDDPEYRYKMPRLQAKIEGRGNGIKTLVVNCADIATSLHRSTAEVCKFFGCELGAQSKYDEKTDRAIVNGAFEASMMQQHLSKYIEGFVLCPGCRLPETKYKFKGQLIYHKCYACGAVEPVDMNHKLTTFIFKEHTAAKRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVWHTDLSAEAVAAXXXXXXXXXXXXXXXXXXXXXXXVVATLDNLQVDDENALDSAVSNLQRFLSESHSE---TDIYEELCRQQTYSALPVTDRLVIFFRSAFTKQVLASNQIAKYAPVLEKII---EGQHSQYQLLALAEHFCAVENPE-LLSSYPILLKLLYDEELLEEECLVAWANDGVRKEYAHWAVTDALAAKLKALLQPFVEWLENAE 432          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: CBN75025.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 250.4 bits (638), Expect = 1.100e-62
Identity = 213/434 (49.08%), Postives = 265/434 (61.06%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFG-PDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPT-EFTRREVSEEMVEMLRGEAEKFVTWLKEA 433
            +NI+G  PI+D  YRYKMPR++ KVEGRGNGIKTV+ N+ D++ AL R P EV KFFGTELGAQT Y EE ERA+VNGAH+   LQ L+ +Y++ FVLCP+C LPE+ YKIK G I+ KC ACG K M DMSHKL T+I+NT K                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXX          G++VAT  +L VEDA AF  +V  + + L      +   + +E+R   TF+A  +  R+ LFV A+F   D   ++ +     +   L    D    QR +IG  E LC V H+  L+  FP++LK LYD ++V+EE  L WA E+G + EFT   +S+E V  LR +A  FVTWL+EA
Sbjct:    5 INISGTEPIDDPEYRYKMPRVIGKVEGRGNGIKTVIFNVMDLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAK------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNGDDSXXXXXXXXXXXXXXXXXXXXXXXGETKTTVNEFGDVVATSGSLEVEDAVAFDDSVAAIRRHLD--DGTSNENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRAAMFDMLKSRPDD---QRHIIGAFELLCQV-HRPNLVGFFPVILKHLYDSDIVEEEAMLMWAGEQGRSEEFTPPALSDEQVAALRAKATPFVTWLEEA 390          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: XP_009526246.1 (hypothetical protein PHYSODRAFT_559899 [Phytophthora sojae] >EGZ17188.1 hypothetical protein PHYSODRAFT_559899 [Phytophthora sojae])

HSP 1 Score: 250.0 bits (637), Expect = 1.400e-62
Identity = 238/442 (53.85%), Postives = 296/442 (66.97%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDG--------KSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFL-SAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            MNIAG  P++D  YRYKMPR+ AK+EGRGNGIKT+V+N  D+A++LHR  AEV KFFG ELGAQ+ Y E+T+RA+VNGA  A  +Q  L +YI+GFVLCP C LPET YK KG +I+ KC ACG     DM+HKLTTFI   H  A +                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXXXXXXXXXXXX     T+DNL V+D  A  +AV  L++FL  +H E   +++ +E+    T+SAL + DRL +F ++AF  +    N V K   VL+ +I   DA+  Q +L+ + EH CAV H E LL  +P+LLK LYDE++++EE  + WA      E+    V++E+   L+   + F+ WL+ AE
Sbjct:    4 MNIAGTQPVDDPEYRYKMPRLQAKIEGRGNGIKTLVVNCADIATSLHRSTAEVCKFFGCELGAQSKYDEKTDRAIVNGAFEAGMMQQHLSKYIEGFVLCPGCRLPETKYKFKGQLIFHKCYACGAVEPVDMNHKLTTFIFKEHTAAKRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVWHTDLSAEAVAARXXXXXXXXXXXXXXXXXXXXXXXXXTLDNLQVDDENALDSAVANLQRFLKESHSE---SEIFEELCRQQTYSALPVTDRLVIFFRSAFTKEVLSSNQVAKFAPVLEKII---DAQHAQYQLLALTEHFCAVEHSE-LLTSYPILLKLLYDEDLLEEECLVAWANNGVRKEYAHWAVTDELAAKLKTLLQPFIEWLENAE 438          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: XP_024584654.1 (eukaryotic translation initiation factor 5 [Plasmopara halstedii] >CEG48285.1 eukaryotic translation initiation factor 5 [Plasmopara halstedii])

HSP 1 Score: 249.2 bits (635), Expect = 2.400e-62
Identity = 238/435 (54.71%), Postives = 299/435 (68.74%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTH--KKASKDGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            MNIAG   ++D  YRYKMPR+ AK+EGRGNGIKT+V+N  D+A++LHR  AEV KFFG ELGAQ+ Y E+T+RA+VNGA  A  +Q  L +YI+GFVLCP C LPET YK KG +I+ KC ACG     DM+HKLTTFI   H   K S         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXXXX   VAT+DNL V+D  A  + +  L++FLS +   + +++ DE+    T+SAL + DRL +F ++AF       N   K+  VL+ +I   D +  Q +L+ ++EH CAV H + LL  +P+LLK LYDE++++E+  + WA      E+   EV++E+   L+   + F+ WL+ AE
Sbjct:    4 MNIAGTQSVDDPEYRYKMPRLQAKIEGRGNGIKTLVVNCADIATSLHRSTAEVCKFFGCELGAQSKYDEKTDRAIVNGAFEAGQMQQHLSKYIEGFVLCPGCRLPETKYKFKGQLIFHKCYACGAVEPVDMNHKLTTFIFKEHTAAKRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVWHTDLSAEAVAXXXXXXXXXXXXXXXXXXXXXXXXXVATLDNLHVDDENALDSTISNLKRFLSEN--HSTSEIFDELCRQQTYSALPVTDRLVIFFRSAFTDQMLVDNQAVKYAPVLEKII---DGQHSQYQLLALVEHFCAVKHPK-LLNSYPILLKILYDEDLLEEDCLVSWATNGVRKEYAHWEVTDELAAKLKNLLQPFIEWLENAE 432          
The following BLAST results are available for this feature:
BLAST of NO05G03920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28016.11.600e-13885.42eukaryotic translation initiation factor 5 [Nannoc... [more]
XP_008893151.14.000e-6555.58hypothetical protein PPTG_01569 [Phytophthora para... [more]
CCA27172.14.400e-6448.27eukaryotic translation initiation factor 5 putativ... [more]
XP_002907928.12.200e-6355.28eukaryotic translation initiation factor 5, putati... [more]
CCI49784.12.200e-6350.58unnamed protein product [Albugo candida][more]
CCI49785.12.200e-6350.58unnamed protein product [Albugo candida][more]
OWZ15329.18.300e-6355.28Eukaryotic translation initiation factor 5 [Phytop... [more]
CBN75025.11.100e-6249.08conserved unknown protein [Ectocarpus siliculosus][more]
XP_009526246.11.400e-6253.85hypothetical protein PHYSODRAFT_559899 [Phytophtho... [more]
XP_024584654.12.400e-6254.71eukaryotic translation initiation factor 5 [Plasmo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR120ngnoR120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003468NSK003468Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03920.1NO05G03920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|625250gene_3200Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g39gene2553Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03920.1NO05G03920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03920 ID=NO05G03920|Name=NO05G03920|organism=Nannochloropsis oceanica|type=gene|length=1359bp
ATGAACATAGCGGGGCTCAACCCCATCGAAGACGCCAACTATCGGTACAA
AATGCCCCGCATCTTGGCTAAAGTGGAGGGGCGTGGAAACGGGATAAAAA
CCGTCGTTATCAACATGAAAGACGTCGCCTCTGCCCTCCACCGCATGCCC
GCAGAAGTCACCAAATTCTTTGGCACGGAACTTGGCGCCCAGACCACCTA
CAGGGAAGAAACGGAGCGAGCGGTGGTGAACGGCGCGCATTCTGCGCCTG
CGCTGCAGGCGCTTTTGTGCCGGTACATCCAGGGGTTTGTCCTTTGTCCC
TCTTGTGGGTTGCCTGAGACGGCCTACAAGATCAAAGGGGGGGTGATTTA
TCAGAAATGTGACGCGTGTGGGGAGAAGAGTATGTGTGATATGAGTCATA
AATTGACGACATTCATCATTAACACGCATAAGAAGGCGAGTAAGGATGGG
AAGAGCGTCAAGGAGGCAAAGGAGAAGAAGAAGAAGGTGCGGGCCAAGGC
CGAGGCGGACGCGGGGGAGGAGGACGGAGATGAAGACGGGGAGGCTGGAG
GGGGAAAAGAGAAGGAGAAGAAAAAGAAGAAGAAAAAGGATAAGGACGAC
AGGGAGAAGAAGAAGAAGAAGAAGGAGAAAAAGGAGAAAAGCTCTGAGGC
GGGTAGCAGTGACGGGGACGGGAACGGCAACGGCCTGGTCAATGGCAGCA
GCAGTAGCAAGAAATCCGGCGGTGGCTCCTCCTCGGACGAAGATGAAGAC
GAGGAAGGAGAAGACGGAGAGTTGGTGGCTACGATGGATAATCTGGCCGT
TGAGGACGCGACCGCTTTCGCGGCTGCTGTTGGGAGGTTGGAGCAGTTCT
TGAGTGCCCACCCGGAAGCGACGGCGGCGCAGGTGTTGGATGAGGTGAGG
ATGATTGCGACTTTTTCGGCATTGTCCATTGAAGATCGGTTATTCTTGTT
TGTCCAGGCAGCATTTGGGCCGGATGCGGCGAAGCAAAACATGGTGGGGA
AGCATGTGAAGGTCTTGAAGGGATTAATTTTGAATGTCGACGCCGAGGCG
TACCAGCGGCGGTTGATTGGAGTGATAGAGCATCTATGTGCCGTCACGCA
CAAGGAGACGCTGCTGAAGATGTTTCCTCTGTTGCTGAAGCAGCTGTATG
ATGAGGAGGTGGTGGACGAAGAGGTGTTTTTGGAGTGGGCGGAGGAGGAG
GGCCCTACTGAGTTCACACGACGAGAGGTGAGTGAGGAAATGGTGGAGAT
GTTGAGGGGGGAAGCGGAGAAATTTGTGACGTGGTTGAAGGAGGCGGAGG
AGAGTGGGTCAGAGGAGGATGAGGAGAGCGAGGAGGAGGAGGAGGACAGC
GAGGACTAA
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protein sequence of NO05G03920.1

>NO05G03920.1-protein ID=NO05G03920.1-protein|Name=NO05G03920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=453bp
MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMP
AEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCP
SCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDG
KSVKEAKEKKKKVRAKAEADAGEEDGDEDGEAGGGKEKEKKKKKKKDKDD
REKKKKKKEKKEKSSEAGSSDGDGNGNGLVNGSSSSKKSGGGSSSDEDED
EEGEDGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVR
MIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEA
YQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEE
GPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAEESGSEEDEESEEEEEDS
ED*
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Synonyms
Publications