NO05G03550, NO05G03550 (gene) Nannochloropsis oceanica

Overview
NameNO05G03550
Unique NameNO05G03550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1982
Alignment locationchr5:928778..930759 +

Link to JBrowse

Properties
Property NameValue
DescriptionSun protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:928778..930759 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0003723RNA binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR035926NusB-like_sf
IPR001678MeTrfase_RsmB/NOP2
IPR006027NusB_RsmB_TIM44
IPR023267RCMT
Homology
BLAST of NO05G03550 vs. NCBI_GenBank
Match: EWM28049.1 (sun protein [Nannochloropsis gaditana])

HSP 1 Score: 637.9 bits (1644), Expect = 3.100e-179
Identity = 346/581 (59.55%), Postives = 432/581 (74.35%), Query Frame = 0
Query:    3 PRFISPTQAKNPREAAYLAALAADREQAFISDALSEWADAKEPSASEMGLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTT-DRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREE-----EHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEG---GKDLMMKVLPGEGQGGAFDGGFGCALRRRS 575
            PRFI P++A++PREAAYLA LAA+R+QAFI+D L++W+  K PS+SE+GLATL+ANVACREA SLD+AI  LA     GA++ +G +R  SV+LKGRQR VLRTALAQYKYCTR PLYAIV+ AVE AK+YGGG +F +FTNALLRKL PDPT+ D+      + +  + +  V    +G   D RPLPLP+G+SE+ALA RLSYPPFLV   ++EFGK+ A  IM+A N FPP M RSR  +A AP L     + +EE     E  SA   +P    + +S + K  K  W TV +LP ALH PLPLPYTLGVV S+ L + LTQ++GWY+TNGTPAGLLARLAQGA  RV  +D A + +R+  L+VLD+CAAPGGKGLAVWD++ +GQG   ++LVMNDVN  K  RI ENL++FGL  ++ LT+GDG +L+++++  Q  S +      E+ GFD+V+LD PCSNAGVLGRRPEARWRL+D   L+ELE TQFSLLKHA EELLS T+   EIWY+TCSIL GEDEGMVE+AC+ELGLEVVV+    G+ L MKVLPGEG  GAFDGGFGCALRR++
Sbjct:  113 PRFIPPSRARSPREAAYLAVLAAERDQAFIADYLADWSRRKRPSSSEIGLATLVANVACREAASLDFAIEALA-----GAEDVRGGRR--SVKLKGRQRAVLRTALAQYKYCTRMPLYAIVNDAVELAKEYGGGIAFASFTNALLRKLHPDPTSLDKKASEADNTRVHQGENFVHGGADG---DIRPLPLPEGNSEKALATRLSYPPFLVKALVQEFGKSHAISIMKASNIFPPVMARSRIPEAKAPKLSGEAIEDKEEKGMGTEVHSAVDLSPEMAASSLSDSLKRGKASWETVESLPMALHAPLPLPYTLGVVHSDVLLQLLTQNDGWYITNGTPAGLLARLAQGAAKRVL-ADSAAEESRDPVLQVLDVCAAPGGKGLAVWDIL-QGQGRR-VSLVMNDVNGAKKARIAENLARFGLSQEVQLTVGDGASLSKKDVANQTDSFVGSV--IEQNGFDIVVLDVPCSNAGVLGRRPEARWRLKDGVFLKELETTQFSLLKHAEEELLSKTNRHAEIWYLTCSILWGEDEGMVEKACKELGLEVVVDAENEGRPLRMKVLPGEGLKGAFDGGFGCALRRKA 678          
BLAST of NO05G03550 vs. NCBI_GenBank
Match: WP_013181249.1 (ribosomal RNA small subunit methyltransferase B [Waddlia chondrophila] >ADI37521.1 putative ribosomal RNA small subunit methyltransferase B [Waddlia chondrophila WSU 86-1044] >CCB90462.1 putative ribosomal RNA small subunit methyltransferase B [Waddlia chondrophila 2032/99])

HSP 1 Score: 226.9 bits (577), Expect = 1.600e-55
Identity = 180/564 (31.91%), Postives = 254/564 (45.04%), Query Frame = 0
Query:    9 TQAKNPREAAYLAALAADREQAFISDALSEWADAKEPSASEMGLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCALRR 573
            T+ KNPREAAYLA L++ RE++F+ D+L++W     PS  +  LA  +A    R A +LD+    LA               +K + LK R++++ R  L Q+ Y  + PLYAIVD  ++ AK +    SF  F NA LRK+                            EE D        LPKG +   L++R SYP + V   ++ FG  KA+ IMEAGN    TM R R             S  +E   E    A    G                                  +GV+R   L   ++    +Y+ N TPA L++ LAQ      FG+             +LDLC++PGGK +   D+  + +      L  NDV+  K   + EN +K+G+   +                    S++ GE       FD+VILD PCSN GVL +RPEARWRL  +  L +LEE Q  LL+   E L  G    GE+WY+TCS+LK E+  ++++ C+EL LE        L   +LP       +DGGFGCALR+
Sbjct:    4 TKTKNPREAAYLALLSSAREESFLIDSLAQWQAKCRPSIQDYHLAREVAYGTTRMALALDHLALQLAD--------------KKKLALKLREKILFRMGLYQFHYMDKIPLYAIVDETIKIAKIH-CHESFVKFLNACLRKV----------------------------EEIDPQ------LPKGETVPELSIRYSYPAYYVQELVQNFGLEKAEEIMEAGNRPSQTMFRVRP----------QASRPKEANGEIDFLAGTRCG----------------------------------MGVIRDPSLISNISSSSDYYIQNATPAELMSSLAQD-----FGAPK----------NILDLCSSPGGKLILAHDLYPDAE------LSANDVSSGKLKPLSENCAKYGISTTL--------------------SSVRGEEFPLAQKFDLVILDVPCSNTGVLNKRPEARWRL-SQKTLEQLEEIQLQLLRRGIELLDKG----GELWYLTCSVLKRENGRLIDKVCQELSLET------RLKEAILP---NADGWDGGFGCALRK 419          
BLAST of NO05G03550 vs. NCBI_GenBank
Match: PJD95129.1 (hypothetical protein CK425_09375 [Parachlamydia sp.])

HSP 1 Score: 218.4 bits (555), Expect = 5.800e-53
Identity = 180/569 (31.63%), Postives = 254/569 (44.64%), Query Frame = 0
Query:    8 PTQAKNPREAAYLAALAADREQAFISDALSEWADAKEPSASEMGLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLR---VLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCALRRR 574
            P++  NPREAA+LA L   +E  FI ++L +W     PS  +  LA  +A+   R   +LDY    +A                 S+ LK ++R +LRTAL Q  +    PLYAI   A   +K+Y     F  F NA++RKL                              GDG       LP G S EAL++  SYP  LV  F++ FG  K   +++ GN  P  M+R R+             +T EE                   A K  ++P       PP +            ++  +    L Q   +Y+ NGTP  L++ L                 +RE  L+   +LDLCA+PGGK L   D+  E Q      L  NDV+ +K  R+R N  K+ L+    LT  +G     E+L                  FD++I+DAPCSN GVL +RPEARWR  +E   + LEETQ  LL+HA+  L    +P GEIWY+TCSIL  E+E ++++ C+E  L V  +      + + P E      DGGF CAL+R+
Sbjct:    5 PSKVINPREAAFLAVLTFLKEGTFIRESLDKWQKTHSPSRMDFNLALDLASGTVRMGLALDYIAKKIA--------------NRTSLSLKVKERALLRTALYQAVFRKDIPLYAIGQEAGTLSKKYCHA-VFSKFLNAVIRKL------------------------------GDGVPA----LPAGKSAEALSIHYSYPVLLVAYFLKVFGLEKTVDLLQLGNNPPKVMVRLRSL------------ETPEE-------------------ADKLERIP-----GGPPEMRH----------LKDAQWLSTLAQSPNFYIQNGTPFLLMSHL-----------------SREASLKPHSILDLCASPGGKTLLAHDLYPEAQ------LFANDVSSQKMERLRANCQKYDLD--AVLTCANGEEFVSEQL------------------FDLIIVDAPCSNTGVLSKRPEARWRFSEET-CKNLEETQCKLLRHAATLL----NPHGEIWYLTCSILDFENEKLIQQVCQENDLHVRTQ------LTIYPTE---TGLDGGFACALQRK 421          
BLAST of NO05G03550 vs. NCBI_GenBank
Match: WP_059360418.1 (hypothetical protein [Parachlamydia acanthamoebae])

HSP 1 Score: 208.4 bits (529), Expect = 6.000e-50
Identity = 173/557 (31.06%), Postives = 243/557 (43.63%), Query Frame = 0
Query:   15 REAAYLAALAADREQAFISDALSEWADAKEPSASEMGLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCALR 572
            REAA+LA  +  +E  F+S++L  W   + PS+ +   A  IA  + R A +LDY                K     +S+ LK ++R +LRTA+ Q  +   TPLYAI   +   AK+Y   P+F +F NALLRKL                              G G      PLP+G+S + L++R SYP  LV  F+++FG  K K ++E GN   PTM+R R                                  P +  ++  K   T +  L P           L  ++        +Q    Y+ NGTP  L+  L Q A               E    +LDLCA+PGGK L   D       + +  L  NDV+E K   ++EN  K+ L   +  + G+     R                     FD++I+DAPCSN GVL +RPEARWR   E+ L++LEETQ  LL HA   L    S +GEIWY+TCSIL  E+E + ++  ++ GL +           +LP        DGGF CALR
Sbjct:    7 REAAFLAVYSFLKEGKFLSESLENWKQKESPSSLDFSFAQDIAYGSVRMALALDYI--------------AKSTAERQSLSLKVKERSLLRTAIYQAAFQRSTPLYAIGQESGNLAKKY-CHPTFSSFLNALLRKL------------------------------GSGIP----PLPEGNSLQDLSIRYSYPLPLVEAFLDDFGLEKCKQMLELGNHPAPTMVRIR----------------------------------PHASLTEDEKEKLTCIPELSP----------HLACIKETGTLSIFSQSPHTYIQNGTPYLLMEHLRQSA---------------ENPQTILDLCASPGGKLLLAHDF------YPSATLFANDVSERKLKTLQENCHKYQLNVSLSCSKGEFFASDRR--------------------FDLIIVDAPCSNTGVLNKRPEARWRFSPES-LKQLEETQLQLLAHARTLL----SDKGEIWYLTCSILSQENEKLAQKISQKSGLFMRTS------QTILP---NALGLDGGFACALR 415          
BLAST of NO05G03550 vs. NCBI_GenBank
Match: WP_006341520.1 (hypothetical protein [Parachlamydia acanthamoebae] >EFB41232.1 hypothetical protein pah_c048o056 [Parachlamydia acanthamoebae str. Hall's coccus] >CCB85073.1 putative uncharacterized protein [Parachlamydia acanthamoebae UV-7])

HSP 1 Score: 207.6 bits (527), Expect = 1.000e-49
Identity = 176/557 (31.60%), Postives = 245/557 (43.99%), Query Frame = 0
Query:   15 REAAYLAALAADREQAFISDALSEWADAKEPSASEMGLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCALR 572
            REAA+LA  +  +E  F+S++L  W   + PS+ +   A  IA  + R A +LDY                K     +S+ LK ++R +LRTA+ Q  +   TPLYAI   +   AK+Y   P+F +F NALLRKL                              G G      PLP+G+S + L++R SYP  LV  F+++FG  K K ++E GN   PTM+R R      P + L      E+E E                         T +  L P           L  ++        +Q    Y+ NGTP  L+  L Q A               E    +LDLCA+PGGK L   D       + +  L  NDV+E K   ++EN  K+ L   +  + G+     R                     FD++I+DAPCSN GVL +RPEARWR   E+ L++LEETQ  LL HA   L    S +GEIWY+TCSIL  E+E + ++  ++ GL +           +LP        DGGF CALR
Sbjct:    7 REAAFLAVYSFLKEGKFLSESLENWKQKESPSSLDFSFAQDIAYGSVRMALALDYI--------------AKSTAERQSLSLKVKERSLLRTAIYQAAFQRSTPLYAIGQESGNLAKKY-CHPTFSSFLNALLRKL------------------------------GSGIP----PLPEGNSLQDLSIRYSYPLPLVEAFLDDFGLEKCKQMLELGNHPAPTMVRIR------PHVSLT-----EDEKEKL-----------------------TCIPELSP----------HLACIKETGTLSIFSQSPHTYIQNGTPYLLMEHLRQSA---------------ENPQTILDLCASPGGKLLLAHDF------YPSATLFANDVSERKLKTLQENCHKYQLNVSLSCSKGEFFASDRR--------------------FDLIIVDAPCSNTGVLNKRPEARWRFSPES-LKQLEETQLQLLAHARTLL----SDKGEIWYLTCSILSQENEKLAQKISQKSGLFMRTS------QTILP---NALGLDGGFACALR 415          
BLAST of NO05G03550 vs. NCBI_GenBank
Match: KIA76453.1 (hypothetical protein DB43_AG00310 [Parachlamydia acanthamoebae])

HSP 1 Score: 207.6 bits (527), Expect = 1.000e-49
Identity = 176/557 (31.60%), Postives = 245/557 (43.99%), Query Frame = 0
Query:   15 REAAYLAALAADREQAFISDALSEWADAKEPSASEMGLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCALR 572
            REAA+LA  +  +E  F+S++L  W   + PS+ +   A  IA  + R A +LDY                K     +S+ LK ++R +LRTA+ Q  +   TPLYAI   +   AK+Y   P+F +F NALLRKL                              G G      PLP+G+S + L++R SYP  LV  F+++FG  K K ++E GN   PTM+R R      P + L      E+E E                         T +  L P           L  ++        +Q    Y+ NGTP  L+  L Q A               E    +LDLCA+PGGK L   D       + +  L  NDV+E K   ++EN  K+ L   +  + G+     R                     FD++I+DAPCSN GVL +RPEARWR   E+ L++LEETQ  LL HA   L    S +GEIWY+TCSIL  E+E + ++  ++ GL +           +LP        DGGF CALR
Sbjct:   11 REAAFLAVYSFLKEGKFLSESLENWKQKESPSSLDFSFAQDIAYGSVRMALALDYI--------------AKSTAERQSLSLKVKERSLLRTAIYQAAFQRSTPLYAIGQESGNLAKKY-CHPTFSSFLNALLRKL------------------------------GSGIP----PLPEGNSLQDLSIRYSYPLPLVEAFLDDFGLEKCKQMLELGNHPAPTMVRIR------PHVSLT-----EDEKEKL-----------------------TCIPELSP----------HLACIKETGTLSIFSQSPHTYIQNGTPYLLMEHLRQSA---------------ENPQTILDLCASPGGKLLLAHDF------YPSATLFANDVSERKLKTLQENCHKYQLNVSLSCSKGEFFASDRR--------------------FDLIIVDAPCSNTGVLNKRPEARWRFSPES-LKQLEETQLQLLAHARTLL----SDKGEIWYLTCSILSQENEKLAQKISQKSGLFMRTS------QTILP---NALGLDGGFACALR 419          
BLAST of NO05G03550 vs. NCBI_GenBank
Match: KIC71745.1 (putative ribosomal RNA small subunit methyltransferase B [Neochlamydia sp. TUME1])

HSP 1 Score: 200.7 bits (509), Expect = 1.300e-47
Identity = 165/561 (29.41%), Postives = 256/561 (45.63%), Query Frame = 0
Query:   13 NPREAAYLAALAADREQAFISDALSEWADAKEPSASEMGLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCALRRR 574
            N REAA+ A L + + ++FIS+ L EW   ++PS+ +  LA  IA  + + A +LDY    L++              +K +RLK +++ +LRTAL Q+ +  + P YAIVD +++ AK++     F A+ NA+LRK                                       L LP+G    +L++R S+P + +    + +G      I+EA N    TM R R                             V  PA            W TV   P  + T         V+ SE   +++     +Y+ N TPA L+  L+Q              G  +    +LD+CA+PGGK LA+ D   +       AL  NDV+  K  ++++N +K+G++ ++  + G+ L L ++                    FD+++LD PCSN+GVL +RPEARWRL ++   ++L+  QF+LLKHA   L       GEIWYMTCSIL  E+E +V  AC+EL L       K  ++ +LP       +DGGF C L ++
Sbjct:    3 NSREAAFFALLHSLKGESFISEYLGEWFKKEQPSSQDYQLAHQIAYGSAQMALALDYLALQLSE--------------KKKMRLKLKEKALLRTALYQFYFLDKLPHYAIVDESIKIAKKHFHS-YFVAYLNAILRKF----------------------------------SLLSLTLPQGMDLPSLSIRYSFPLYFIKNLSKHYGLQATIKILEASNKPALTMARLRNI---------------------------VEIPA-----------EWNTVIEEPVKVIT---------VLASE--VKKVASSADYYIQNVTPASLIGSLSQ--------------GINKAPTSILDICASPGGKTLALHDFFPQA------ALYANDVSLHKIQKLKDNFAKYGVQAQVSCSEGEKLELDKK--------------------FDLIVLDVPCSNSGVLSKRPEARWRLNEDQ-AKQLKIIQFNLLKHAVHLL----ENEGEIWYMTCSILPEENEEIVAIACQELDLI------KKNLISILP---NAEGWDGGFACCLVKK 411          
BLAST of NO05G03550 vs. NCBI_GenBank
Match: WP_080502509.1 (hypothetical protein [Neochlamydia sp. TUME1])

HSP 1 Score: 200.7 bits (509), Expect = 1.300e-47
Identity = 165/561 (29.41%), Postives = 256/561 (45.63%), Query Frame = 0
Query:   13 NPREAAYLAALAADREQAFISDALSEWADAKEPSASEMGLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCALRRR 574
            N REAA+ A L + + ++FIS+ L EW   ++PS+ +  LA  IA  + + A +LDY    L++              +K +RLK +++ +LRTAL Q+ +  + P YAIVD +++ AK++     F A+ NA+LRK                                       L LP+G    +L++R S+P + +    + +G      I+EA N    TM R R                             V  PA            W TV   P  + T         V+ SE   +++     +Y+ N TPA L+  L+Q              G  +    +LD+CA+PGGK LA+ D   +       AL  NDV+  K  ++++N +K+G++ ++  + G+ L L ++                    FD+++LD PCSN+GVL +RPEARWRL ++   ++L+  QF+LLKHA   L       GEIWYMTCSIL  E+E +V  AC+EL L       K  ++ +LP       +DGGF C L ++
Sbjct:   30 NSREAAFFALLHSLKGESFISEYLGEWFKKEQPSSQDYQLAHQIAYGSAQMALALDYLALQLSE--------------KKKMRLKLKEKALLRTALYQFYFLDKLPHYAIVDESIKIAKKHFHS-YFVAYLNAILRKF----------------------------------SLLSLTLPQGMDLPSLSIRYSFPLYFIKNLSKHYGLQATIKILEASNKPALTMARLRNI---------------------------VEIPA-----------EWNTVIEEPVKVIT---------VLASE--VKKVASSADYYIQNVTPASLIGSLSQ--------------GINKAPTSILDICASPGGKTLALHDFFPQA------ALYANDVSLHKIQKLKDNFAKYGVQAQVSCSEGEKLELDKK--------------------FDLIVLDVPCSNSGVLSKRPEARWRLNEDQ-AKQLKIIQFNLLKHAVHLL----ENEGEIWYMTCSILPEENEEIVAIACQELDLI------KKNLISILP---NAEGWDGGFACCLVKK 438          
BLAST of NO05G03550 vs. NCBI_GenBank
Match: WP_079979938.1 (hypothetical protein [Neochlamydia sp. S13])

HSP 1 Score: 198.4 bits (503), Expect = 6.200e-47
Identity = 164/561 (29.23%), Postives = 255/561 (45.45%), Query Frame = 0
Query:   13 NPREAAYLAALAADREQAFISDALSEWADAKEPSASEMGLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCALRRR 574
            N REAA+ A L + + ++FIS+ L EW   ++PS+ +  LA  IA  + + A +LDY    L++              +K +RLK +++ +LRTAL Q+ +  + P YAIVD +++ AK++     F A+ NA+LRK                                       L LP+G    +L++R S+P + +    + +G      I+EA N    TM R R                             V  PA            W TV   P  + T         V  SE   +++     +Y+ N TPA L+  L+Q              G  +    +LD+CA+PGGK LA+ D   +       AL  NDV+ +K  ++++N +K+G++ ++  + G+ L L ++                    FD+++LD PCSN+GVL +RPEARWRL ++   ++L+  Q +LLKHA   L       GEIWYMTCSIL  E+E +V  AC+EL L       K  ++ +LP       +DGGF C L ++
Sbjct:   30 NSREAAFFALLHSLKGESFISEYLGEWFKKEQPSSQDYQLAHQIAYGSAQMALTLDYLALQLSE--------------KKKMRLKLKEKALLRTALYQFYFLDKLPHYAIVDESIKIAKKHFHS-YFVAYLNAILRKF----------------------------------SLLSLTLPQGMDLPSLSIRYSFPLYFIKNLSKHYGLQATIKILEASNKPALTMARLRNI---------------------------VEIPA-----------EWNTVIEEPVKVIT---------VPASE--VKRVASSADYYIQNVTPASLIGNLSQ--------------GISKAPTSILDICASPGGKTLALHDFFPQA------ALYANDVSLQKIQKLKDNFAKYGVQAQVSCSEGEKLELDKK--------------------FDLIVLDVPCSNSGVLSKRPEARWRLNEDQ-AKQLKIIQLNLLKHAVHLL----ENEGEIWYMTCSILPEENEEIVALACQELDLI------KKNLISILP---NAEGWDGGFACCLVKK 438          
BLAST of NO05G03550 vs. NCBI_GenBank
Match: KIC75918.1 (putative ribosomal RNA small subunit methyltransferase B [Neochlamydia sp. EPS4])

HSP 1 Score: 198.0 bits (502), Expect = 8.100e-47
Identity = 164/561 (29.23%), Postives = 255/561 (45.45%), Query Frame = 0
Query:   13 NPREAAYLAALAADREQAFISDALSEWADAKEPSASEMGLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCALRRR 574
            N REAA+ A L + + ++FIS+ L EW   ++PS+ +  LA  IA  + + A +LDY    L++              +K +RLK +++ +LRTAL Q+ +  + P YAIVD +++ AK++     F A+ NA+LRK                                       L LP+G    +L++R S+P + +    + +G      I+EA N    TM R R                             V  PA            W+TV   P  + T         V  SE   +++     +Y+ N TPA L+  L+Q              G  +    +LD+CA+PGGK LA+ D   +       AL  NDV+ +K  ++++N +K+G++ ++  + G+ L L ++                    FD+++LD PCSN+GVL +RPEARWRL ++   ++L+  Q +LLKHA   L       GEIWYMTCSIL  E+E +V  AC+EL L       K   + +LP       +DGGF C L ++
Sbjct:   49 NSREAAFFALLHSLKGESFISEYLGEWFKKEQPSSQDYQLAHQIAYGSAQMALTLDYLALQLSE--------------KKKMRLKLKEKALLRTALYQFYFLDKLPHYAIVDESIKIAKKHFHS-YFVAYLNAILRKF----------------------------------SLLSLTLPQGMDLPSLSIRYSFPLYFIKNLSKYYGLQATTKILEASNKPALTMARLRNI---------------------------VEIPA-----------EWSTVIEEPVKVIT---------VPASE--VKRVASSADYYIQNVTPASLIGNLSQ--------------GISKAPTSILDICASPGGKTLALHDFFPQA------ALYANDVSLQKIQKLKDNFAKYGVQAQVSCSEGEKLELDKK--------------------FDLIVLDVPCSNSGVLSKRPEARWRLNEDQ-AKQLKIIQLNLLKHAVHLL----ENEGEIWYMTCSILPEENEEIVALACQELDLI------KKNFISILP---NAEGWDGGFACCLVKK 457          
The following BLAST results are available for this feature:
BLAST of NO05G03550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28049.13.100e-17959.55sun protein [Nannochloropsis gaditana][more]
WP_013181249.11.600e-5531.91ribosomal RNA small subunit methyltransferase B [W... [more]
PJD95129.15.800e-5331.63hypothetical protein CK425_09375 [Parachlamydia sp... [more]
WP_059360418.16.000e-5031.06hypothetical protein [Parachlamydia acanthamoebae][more]
WP_006341520.11.000e-4931.60hypothetical protein [Parachlamydia acanthamoebae]... [more]
KIA76453.11.000e-4931.60hypothetical protein DB43_AG00310 [Parachlamydia a... [more]
KIC71745.11.300e-4729.41putative ribosomal RNA small subunit methyltransfe... [more]
WP_080502509.11.300e-4729.41hypothetical protein [Neochlamydia sp. TUME1][more]
WP_079979938.16.200e-4729.23hypothetical protein [Neochlamydia sp. S13][more]
KIC75918.18.100e-4729.23putative ribosomal RNA small subunit methyltransfe... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR120ngnoR120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003508NSK003508Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03550.1NO05G03550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|638287gene_3164Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100044g6gene2516Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03550.1NO05G03550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03550 ID=NO05G03550|Name=NO05G03550|organism=Nannochloropsis oceanica|type=gene|length=1982bp
CCCGACGGTTCCCCCCGAATGAAACCCCGCTTTATATCTCCCACTCAAGC
CAAAAATCCCCGCGAAGCAGCGTACCTAGCGGCGCTGGCCGCTGATCGTG
AGCAAGCCTTTATTTCCGATGCTCTGTCTGAATGGGCCGACGCCAAAGAG
CCCTCGGCTTCCGAAATGGGGCTTGCGACCCTAATTGCCAATGTCGCCTG
TCGAGAGGCCAACAGCTTGGACTATGCCATTGGTGTCCTGGCGAAAGGAG
GAGGGGACGGAGCAAAGGAGGAAAAGGGGAAGAAAAGGGAAAAGTCGGTG
AGGTTGAAGGGAAGGCAGCGGGTGGTCTTGCGGACAGCGTTGGCGCAGTA
CAAgtgggtttaagggaagggaggaagggagggtaggagagggcaaggga
gcgatacggaaggaccatgtttcgatgtcgatccaagagaggatgcgtga
cctctatattgcgtagcaccgacgactctccctcccttcctctccctcca
caaaagGTACTGCACGCGAACCCCTCTATATGCCATTGTCGATCACGCTG
TCGAGTGTGCCAAGCAATACGGCGGCGGTCCCTCTTTCGGCGCCTTCACC
AATGCCCTTCTTCGCAAGCTTCCCCCTGATCCTACCACTGACCGCAACGA
TGGGGCGCGCCAGCACCAGCAACAGCGAGAACAACAATATCTAGTCTTTT
CTGCGGAAGAAGGTGATGGAAGCGACACCCGCCCATTGCCCCTGCCCAAG
GGGCACTCGGAAGAGGCTCTCGCGGTTCGTCTCTCCTACCCGCCCTTCCT
CGTCCACCTCTTTATAGAAGAATTCGGGAAGGCCAAAGCCAAACTAATCA
TGGAGGCGGGCAATACATTTCCACCTACCATGCTTCGTTCCCGTGCTGCT
GATGCTGCGGCCCCAGTCCTGCCACTTGCTGGTTCCGATACAAGAGAGGA
GGAGCACGAAAGTGCTTCCGCCGCTGCTCCTGTAGCAGGGCCAGCGCCAA
TGAGTGGTGCTTCAAAATCACTCAAACTTCCCTGGACAACAGTAAATAAT
CTCCCTCCTGCCTTGCATACCCCGCTCCCACTCCCTTACACTCTTGGTGT
CGTCCGTTCGGAGAAATTGTTTCGGCAGCTGACGCAGGACGAAGGATGGT
ATGTCACCAACGGGACACCTGCTGGATTGCTGGCGCGGTTGGCGCAAGGC
GCTGTGGCACGCGTCTTTGGTAGTGATGATGCGGGCAAGGGAACGAGGGA
AGGAGGCTTGCGAGTGTTGGATTTATGTGCGGCGCCCGGAGGGAAGGGTT
TGGCAGTGTGGGATGTTATAAGGGAGGGCCAGGGGCACCATACCTTGGCG
CTGGTAATGAATGATGTGAATGAGGAGAAAACAGGGAGAATAAGGGAAAA
TTTGAGTAAGTTTGGGCTTGAGGATAAAATTCATTTGACGATTGGGGATG
GGTTGACCCTCACGAGGGAGGAGTTGGGGAGGCAGATGGGATCGAATATT
GAGGGAGAAGGGGGGAAGGAGGAGGGAGGATTTGATGTTGTTATTTTGGA
TGCGCCGTGCTCCAATGCGGGGGTGTTGGGGAGGCGGCCAGAGGCTCGCT
GGCGGTTGCGTGATGAAGCATTGCTAAGAGAACTTGAGGAGACACAGTTT
TCGTTGTTGAAGCACGCGAGTGAAGAGCTTTTGTCGGGAACGAGCCCACG
GGGGGAAATATGGTATATGACGTGCTCAATTTTGAAGGGGGAGGATGAGG
GGATGGTGGAGCGGGCGTGTCGGGAGTTGGGATTGGAGGTGGTAGTTGAG
GGAGGGAAAGATCTGATGATGAAGGTTTTGCCGGGGGAGGGGCAAGGAGG
GGCGTTTGATGGTGGGTTTGGATGTGCCTTGCGGAGAAGGAGCTGAAGCA
ATAATGAGACCGTAGAAATCAATTTTTGTAAACATATTCACACACAATTC
AGTGCGCAAGTCAAACAAAAGGGAAATTTCGG
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protein sequence of NO05G03550.1

>NO05G03550.1-protein ID=NO05G03550.1-protein|Name=NO05G03550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=575bp
MKPRFISPTQAKNPREAAYLAALAADREQAFISDALSEWADAKEPSASEM
GLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQ
RVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKL
PPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEAL
AVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVL
PLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHT
PLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFG
SDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVN
EEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKE
EGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHAS
EELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMM
KVLPGEGQGGAFDGGFGCALRRRS*
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Synonyms
Publications