jgi.p|Nanoce1779_2|638287, gene_3164 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|638287
Unique Namegene_3164
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:817523..819400 +

Link to JBrowse

Properties
Property NameValue
TranscriptId638373
ProteinId638287
Product nameS-adenosyl-L-methionine-dependent methyltransferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:817523..819400 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03550NO05G03550Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|638287mRNA_3164-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|638287mRNA_3164Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|638287

>mRNA_3164-protein ID=mRNA_3164-protein|Name=jgi.p|Nanoce1779_2|638287|organism=Nannochloropsis oceanica|type=polypeptide|length=531bp
MKPRFISPTQAKNPREAAYLAALAADREQAFISDALSEWADAKEPSASEM
GLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQ
RVVLRTALAQYKYCTRTPLYAIVDHAVEFAKQYGGGPSFGAFTNALLRKL
PPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEAL
AVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVL
PLAGSDTREEEHESASAAAPKLFRQLTQDEGWYVTNGTPAGLLARLAQGA
VARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLAL
VMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIE
GEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFS
LLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEG
GKDLMMKVLPGEGQGGAFDGGFGCALRRRS*
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Synonyms
Publications