NO05G02860, NO05G02860 (gene) Nannochloropsis oceanica

Overview
NameNO05G02860
Unique NameNO05G02860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2447
Alignment locationchr5:749747..752193 +

Link to JBrowse

Properties
Property NameValue
DescriptionDecaprenyl-diphosphate synthase subunit 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:749747..752193 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR008949Isoprenoid_synthase_dom
IPR000092Polyprenyl_synt
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of NO05G02860 vs. NCBI_GenBank
Match: EWM28148.1 (decaprenyl-diphosphate synthase subunit 1 [Nannochloropsis gaditana])

HSP 1 Score: 592.4 bits (1526), Expect = 1.200e-165
Identity = 316/433 (72.98%), Postives = 362/433 (83.60%), Query Frame = 0
Query:    8 GVQGLQALVQHCSTGGRLMARPNPGTSYAAASHINGSSTLFDTRLYS--SEGSTRGIGQPS----WARTAADASINVLVNAVTRPGVDDPTLKVADPRQTGMEVEGGYDMQEDLALDLSRRPRPELSSSWVEAAQRVDPFKLVESDMRSLSAGIKSLLGTDHPVLEACAKYLFERDGGKKIRPTMVLLVARAAAAHAPRSGSNVNGHHASDPESPGPLPSQKRLAEITEMIHTASLFHDDVIDEADARRGVPSINKLYGNKMAILAGDFLLARASVSLARLRNVEVVELLSTVIEHLVKGEVMQSRPQALLDGSGATDDGRAALEYYLHKNYYKTGSLMANSCRAAVLLAGHGEALQAQAFAYGRHVGLAFQLVDDVLDFEQSSEILGKPALNDLRQGLATAPVLLAAQRFPREVAELIKRKFRSEGDVEKVR 435
            G++ L+ LVQ CSTG R   +P+  +S  A S++N +    D   YS  S GST  I   S    WA+TAADASI+V+VNAVTRP +D+PT+KVA+PR+  ++ +   +++EDLALDL R+PR +L + W  AA+ VDPFK+VESDMRSLSAGIKSLLG+DHPVLEACAKY FE DGGKKIRPTMVLL++RA AAHAP  G N +    S  ES  PLPSQKRLAEITEMIHTASLFHDDVIDEAD RRGVPSINK+YGNKMAILAGDFLLARASVSLARLRN+EVVELLSTVIEHLVKGEVMQSRPQAL+DGSG  ++G+AALEYYLHKN+YKTGSLMANSCRAAVLLAG G+ALQ QAFAYGRHVGLAFQLVDDVLDFEQ+SE LGKPALNDLRQGLATAPVLLAA+ FP EV +++KRKF SEGDVE+VR
Sbjct:    8 GLRRLRGLVQSCSTGFRGGVQPSLISSRTAISYVNRA---VDHIYYSHASIGSTTNIVHRSIRSGWAKTAADASIDVIVNAVTRPEIDEPTVKVAEPRRAIIKADQAGELEEDLALDLQRKPRLDLLAGWAGAARGVDPFKIVESDMRSLSAGIKSLLGSDHPVLEACAKYFFELDGGKKIRPTMVLLISRAVAAHAPAQGVNGSRAFTSTSESSTPLPSQKRLAEITEMIHTASLFHDDVIDEADERRGVPSINKIYGNKMAILAGDFLLARASVSLARLRNIEVVELLSTVIEHLVKGEVMQSRPQALVDGSGTGENGQAALEYYLHKNFYKTGSLMANSCRAAVLLAGGGDALQNQAFAYGRHVGLAFQLVDDVLDFEQTSETLGKPALNDLRQGLATAPVLLAARTFPDEVGDMVKRKFASEGDVERVR 437          
BLAST of NO05G02860 vs. NCBI_GenBank
Match: CBN74415.1 (geranyl-diphosphate synthase [Ectocarpus siliculosus])

HSP 1 Score: 354.4 bits (908), Expect = 5.700e-94
Identity = 203/379 (53.56%), Postives = 256/379 (67.55%), Query Frame = 0
Query:   54 SSEGSTRGIGQPSWARTAADASINVLVNAVTRPGVDDPTLKVADPRQTGMEVEGGYDMQEDLALDLSRRPRPELSSSWVEAAQRVDPFKLVESDMRSLSAGIKSLLGTDHPVLEACAKYLFERDGGKKIRPTMVLLVARAAAAHAPRSGSNVNGHHASDPESPGPLPSQKRLAEITEMIHTASLFHDDVIDEADARRGVPSINKLYGNKMAILAGDFLLARASVSLARLRNVEVVELLSTVIEHLVKGEVMQSRPQALLDGSGATDDGRAALEYYLHKNYYKTGSLMANSCRAAVLLAGHGEALQAQAFAYGRHVGLAFQLVDDVLDFEQSSEILGKPALNDLRQGLATAPVLLAAQRFPREVAELIKRKFRSEGDVEK 433
            S+ GS R +     A    + + N  ++ V   G+D       D     +EV       +D   D+    RP  +S     A   DPF+LV +++  LS GIKSL+GT+H VL A AKY FE DGGKKIRPTMV+L+++A  +++ +   +V       P +    P Q RLAEITEMIH ASLFHDDVIDEAD RRGVPS+NK++GNK+AILAGDFLLAR+S+SLARLR++E VEL+S  IEHLVKGEV+Q RP         T+DG  A EYY+ KNYYKTGSLMANSC+A+ +L  H   +Q  AF YG+ VGLAFQLVDD+LDFE ++  LGKPALNDLRQGLATAPVLLAA++ P  +A+LI RKFR  GDV++
Sbjct:  109 SAAGSVRALSSSFLADAVRETATNHCIDRVVNGGLDGSV--PVDKDTPTVEV-------QDFVYDIDFAQRPSGASQ--SLADGPDPFELVSAELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTMVILMSQACNSNSQQVRPDV------QPGTELVNPLQLRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSLESVELMSAAIEHLVKGEVLQMRP---------TEDGGGAFEYYVRKNYYKTGSLMANSCKASAVLGQHDLEVQEVAFEYGKRVGLAFQLVDDILDFEGNTFTLGKPALNDLRQGLATAPVLLAAEQQP-GLAKLISRKFRGPGDVDE 460          
BLAST of NO05G02860 vs. NCBI_GenBank
Match: XP_009532096.1 (hypothetical protein PHYSODRAFT_336262 [Phytophthora sojae] >EGZ11763.1 hypothetical protein PHYSODRAFT_336262 [Phytophthora sojae])

HSP 1 Score: 343.6 bits (880), Expect = 1.000e-90
Identity = 193/350 (55.14%), Postives = 240/350 (68.57%), Query Frame = 0
Query:   88 VDDPTLKVADPRQTGMEVEGGYDMQEDLALDLSR---RPRPELSSSWVEAAQRVDPFKLVESDMRSLSAGIKSLLGTDHPVLEACAKYLFERDGGKKIRPTMVLLVARAAAAHAPRSGSNVNGHHASDPESPG---PLPSQKRLAEITEMIHTASLFHDDVIDEADARRGVPSINKLYGNKMAILAGDFLLARASVSLARLRNVEVVELLSTVIEHLVKGEVMQSRPQALLDGSGATDDGRAALEYYLHKNYYKTGSLMANSCRAAVLLAGHGEALQAQAFAYGRHVGLAFQLVDDVLDFEQSSEILGKPALNDLRQGLATAPVLLAAQRFPREVAELIKRKFRSEGDVE 432
            VD+PT+ +  P           ++  DL+LD  +        L+    + +   DPF LVE DM S++  IK +LG+DHPVLEA A+Y FE DGGKK+RPTMVLLVAR A AH   +G+ +       PE+        +Q+RLAEITEMIHTASL HDDVIDEAD RRG PS+NK++G KMA+LAGDFLLAR+SVSLARLRN+E VEL+ST IEHLVKGEVMQ      +  + A DD     EYYL KNYYKTGSLM+NSC+AA++L  H E +    FA+GRH+GLAFQL+DDVLD+E  +   GKP L DL+ GL+TAP+LLA + FP  + EL KRKF  EGD+E
Sbjct:   50 VDEPTVSILHPAPGYALAGSSPEVHRDLSLDFDKSVSEMEVPLAYLPTDPSTLADPFTLVEQDMVSVTESIKRILGSDHPVLEAVARYFFEHDGGKKVRPTMVLLVARTAEAHRRATGAPL-------PETQSEEYTRAAQQRLAEITEMIHTASLMHDDVIDEADTRRGRPSVNKVFGGKMAVLAGDFLLARSSVSLARLRNLEAVELMSTSIEHLVKGEVMQ------MKNADARDD-ITPFEYYLRKNYYKTGSLMSNSCKAALVLGKHDERICDLGFAFGRHIGLAFQLIDDVLDYEGVN--TGKPLLADLKSGLSTAPLLLAQEEFP-VLRELAKRKFSKEGDIE 382          
BLAST of NO05G02860 vs. NCBI_GenBank
Match: KUF81147.1 (hexaprenyl pyrophosphate synthase [Phytophthora nicotianae])

HSP 1 Score: 342.0 bits (876), Expect = 2.900e-90
Identity = 194/356 (54.49%), Postives = 242/356 (67.98%), Query Frame = 0
Query:   88 VDDPTLKVADPRQTGMEVEGGYDMQEDLALDLSR---RPRPELSSSWVEAAQRVDPFKLVESDMRSLSAGIKSLLGTDHPVLEACAKYLFERDGGKKIRPTMVLLVARAAAAH-------APRSGSNVNGHHASDPESPGPLPSQKRLAEITEMIHTASLFHDDVIDEADARRGVPSINKLYGNKMAILAGDFLLARASVSLARLRNVEVVELLSTVIEHLVKGEVMQSRPQALLDGSGATDDGRAALEYYLHKNYYKTGSLMANSCRAAVLLAGHGEALQAQAFAYGRHVGLAFQLVDDVLDFEQSSEILGKPALNDLRQGLATAPVLLAAQRFPREVAELIKRKFRSEGDVEKV 434
            VD+PT+ + DP        GG ++  +L+LD  +        L+   ++     DPF LV+ DM +++  IK +LG+DHPVL A A+Y FE DGGKK+RPTMVLLVARAA AH        P + S    H A           Q+RLAEITEMIHTASL HDDVIDEAD RRG PS+NK++G KMA+LAGDFLLAR+SVSLARLRN+E VEL+ST IEHLVKGEVMQ      +  + A DD  +  EYYL KNYYKTGSLM+NSC+AA++L  H + +    FA+GRH+GLAFQL+DDVLD+E  +   GKP L DL+ GL+TAP+LLA + FP  + EL KRKF  EGD+E V
Sbjct:   50 VDEPTVSILDPAPGYALAGGGPELHHNLSLDFDQPMGNVDVPLAYLPIDPINLADPFTLVKQDMVNVNDSIKRILGSDHPVLAAVARYFFEHDGGKKVRPTMVLLVARAAEAHRRAMDTPLPETQSEEYTHAA-----------QQRLAEITEMIHTASLMHDDVIDEADTRRGRPSVNKVFGGKMAVLAGDFLLARSSVSLARLRNLEAVELMSTSIEHLVKGEVMQ------MKNADARDD-ISPFEYYLRKNYYKTGSLMSNSCKAALVLGKHDQHICDLGFAFGRHIGLAFQLIDDVLDYEGVN--TGKPLLADLKSGLSTAPLLLAQEEFP-VLRELSKRKFAKEGDIEMV 384          
BLAST of NO05G02860 vs. NCBI_GenBank
Match: XP_008902245.1 (hypothetical protein PPTG_09126 [Phytophthora parasitica INRA-310] >ETI51869.1 hypothetical protein F443_04881 [Phytophthora parasitica P1569] >ETK91759.1 hypothetical protein L915_04748 [Phytophthora parasitica] >ETL48391.1 hypothetical protein L916_02005 [Phytophthora parasitica] >ETL98297.1 hypothetical protein L917_04595 [Phytophthora parasitica] >ETM51484.1 hypothetical protein L914_04700 [Phytophthora parasitica] >ETN12254.1 hypothetical protein PPTG_09126 [Phytophthora parasitica INRA-310] >ETO80621.1 hypothetical protein F444_04919 [Phytophthora parasitica P1976] >ETP21651.1 hypothetical protein F441_04878 [Phytophthora parasitica CJ01A1] >ETP49543.1 hypothetical protein F442_04948 [Phytophthora parasitica P10297])

HSP 1 Score: 341.3 bits (874), Expect = 5.000e-90
Identity = 193/354 (54.52%), Postives = 241/354 (68.08%), Query Frame = 0
Query:   88 VDDPTLKVADPRQTGMEVEGGYDMQEDLALDLSR---RPRPELSSSWVEAAQRVDPFKLVESDMRSLSAGIKSLLGTDHPVLEACAKYLFERDGGKKIRPTMVLLVARAAAAH-------APRSGSNVNGHHASDPESPGPLPSQKRLAEITEMIHTASLFHDDVIDEADARRGVPSINKLYGNKMAILAGDFLLARASVSLARLRNVEVVELLSTVIEHLVKGEVMQSRPQALLDGSGATDDGRAALEYYLHKNYYKTGSLMANSCRAAVLLAGHGEALQAQAFAYGRHVGLAFQLVDDVLDFEQSSEILGKPALNDLRQGLATAPVLLAAQRFPREVAELIKRKFRSEGDVE 432
            VD+PT+ + DP        GG ++  +L+LD  +        L+   ++     DPF LV+ DM +++  IK +LG+DHPVL A A+Y FE DGGKK+RPTMVLLVARAA AH        P + S    H A           Q+RLAEITEMIHTASL HDDVIDEAD RRG PS+NK++G KMA+LAGDFLLAR+SVSLARLRN+E VEL+ST IEHLVKGEVMQ      +  + A DD  +  EYYL KNYYKTGSLM+NSC+AA++L  H + +    FA+GRH+GLAFQL+DDVLD+E  +   GKP L DL+ GL+TAP+LLA + FP  + EL KRKF  EGD+E
Sbjct:   50 VDEPTVSILDPAPGYALAGGGPELHHNLSLDFDQPMGNVDVPLAYLPIDPINLADPFTLVKQDMVNVNDSIKRILGSDHPVLAAVARYFFEHDGGKKVRPTMVLLVARAAEAHRRAMDTPLPETQSEEYTHAA-----------QQRLAEITEMIHTASLMHDDVIDEADTRRGRPSVNKVFGGKMAVLAGDFLLARSSVSLARLRNLEAVELMSTSIEHLVKGEVMQ------MKNADARDD-ISPFEYYLRKNYYKTGSLMSNSCKAALVLGKHDQHICDLGFAFGRHIGLAFQLIDDVLDYEGVN--TGKPLLADLKSGLSTAPLLLAQEEFP-VLRELSKRKFAKEGDIE 382          
BLAST of NO05G02860 vs. NCBI_GenBank
Match: XP_008870257.1 (solanesyl diphosphate synthase [Aphanomyces invadans] >ETW01259.1 solanesyl diphosphate synthase [Aphanomyces invadans])

HSP 1 Score: 338.6 bits (867), Expect = 3.200e-89
Identity = 190/346 (54.91%), Postives = 241/346 (69.65%), Query Frame = 0
Query:   88 VDDPTLKVADPRQ--TGMEVEGGYDMQEDLALDLSRRPRPELSSSWVEAAQRVDPFKLVESDMRSLSAGIKSLLGTDHPVLEACAKYLFERDGGKKIRPTMVLLVARAAAAHAPRSGSNVNGHHASDPESPGPLPSQKRLAEITEMIHTASLFHDDVIDEADARRGVPSINKLYGNKMAILAGDFLLARASVSLARLRNVEVVELLSTVIEHLVKGEVMQSRPQALLDGSGATDDGRAALEYYLHKNYYKTGSLMANSCRAAVLLAGHGEALQAQAFAYGRHVGLAFQLVDDVLDFEQSSEILGKPALNDLRQGLATAPVLLAAQRFPREVAELIKRKFRSEGDVE 432
            VD+PTL + DP    T    E  +++ ++  L ++       S+  +     VDPF LV+  + S+SA IK +LG+DHPVLEA AKY FE DGGKKIRPTM+LL+++AA A        + G       +     SQ+RLAEITEMIHTASL HDDVIDEAD RRG+ S+NK++G+K++ILAGDFLLAR+S+ LARLR++E VEL+ST IEHLVKGEVMQ R     D SGA     +  EYYL KNYYKTGSLMANSC+A+++L  H + +    FAYGRH+GLAFQL+DDVLD+  S +  GKP L DL+ GLATAPVLLA + FP  + EL+ RKF SEGD+E
Sbjct:   48 VDEPTLSILDPSPGFTAAMRERSFNLVDNFDLPIN----GSHSTQHIRQPMNVDPFALVKDSIVSVSANIKMILGSDHPVLEAVAKYFFENDGGKKIRPTMILLLSQAAEA------DRLAGQSTFPKSAEYIAASQQRLAEITEMIHTASLLHDDVIDEADTRRGMQSVNKVFGSKLSILAGDFLLARSSICLARLRSLEAVELMSTAIEHLVKGEVMQMRH---ADKSGAI----SPFEYYLRKNYYKTGSLMANSCKASLVLGDHTDRVCELGFAYGRHLGLAFQLIDDVLDY--SGQNTGKPMLADLKAGLATAPVLLAQEEFP-VLKELVARKFSSEGDIE 373          
BLAST of NO05G02860 vs. NCBI_GenBank
Match: XP_002895983.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY53759.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 338.6 bits (867), Expect = 3.200e-89
Identity = 191/350 (54.57%), Postives = 241/350 (68.86%), Query Frame = 0
Query:   88 VDDPTLKVADPRQTGMEVEGGYDMQEDLALDLSR---RPRPELSSSWVEAAQRVDPFKLVESDMRSLSAGIKSLLGTDHPVLEACAKYLFERDGGKKIRPTMVLLVARAAAAHAPRSGSNVNGHHASDPESPGP---LPSQKRLAEITEMIHTASLFHDDVIDEADARRGVPSINKLYGNKMAILAGDFLLARASVSLARLRNVEVVELLSTVIEHLVKGEVMQSRPQALLDGSGATDDGRAALEYYLHKNYYKTGSLMANSCRAAVLLAGHGEALQAQAFAYGRHVGLAFQLVDDVLDFEQSSEILGKPALNDLRQGLATAPVLLAAQRFPREVAELIKRKFRSEGDVE 432
            VD+PT+ + DP        GG ++  +L+LD  +        L+    +++   DPF LVE DM S++  IK +LG+DHPVL A A+Y FE DGGKK+RPTMVLLV+RAA AH   + + +       PE+        +Q+RLAEITEMIHTASL HDDVIDEAD RRG PS+NK++G KMA+LAGDFLLAR+SV LARLRN+E VEL+ST IEHLVKGEVMQ      +  + A DD  +  EYYL KNYYKTGSLM+NSC+AA+ L  H + +    FA+GRH+GLAFQL+DDVLD+E      GKP L DL+ GL+TAP+LLA + FP  + EL KRKF  EGD+E
Sbjct:   50 VDEPTVSILDPAPGYALAGGGPELHHNLSLDFDQPMDNVGVPLAYLPTDSSNLADPFTLVEQDMVSVNHSIKRILGSDHPVLAAVARYFFEHDGGKKVRPTMVLLVSRAAEAHRRATDTPL-------PETQSEEYMHAAQQRLAEITEMIHTASLMHDDVIDEADTRRGRPSVNKVFGGKMAVLAGDFLLARSSVLLARLRNLEAVELMSTSIEHLVKGEVMQ------MKNADARDD-ISPFEYYLRKNYYKTGSLMSNSCKAALALGKHDQHICDLGFAFGRHIGLAFQLIDDVLDYEGVE--TGKPFLADLKSGLSTAPLLLAQEEFP-VLRELSKRKFAQEGDIE 382          
BLAST of NO05G02860 vs. NCBI_GenBank
Match: POM67618.1 (Terpenoid synthase [Phytophthora palmivora var. palmivora] >POM68169.1 Terpenoid synthase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 335.5 bits (859), Expect = 2.700e-88
Identity = 193/352 (54.83%), Postives = 242/352 (68.75%), Query Frame = 0
Query:   88 VDDPTLKVADPRQTGMEVEGG---YDM-QEDLALDLSRRPRPELSSSWVEAAQRVDPFKLVESDMRSLSAGIKSLLGTDHPVLEACAKYLFERDGGKKIRPTMVLLVARAAAAHAPRSGSNVNGHHASDPESPG---PLPSQKRLAEITEMIHTASLFHDDVIDEADARRGVPSINKLYGNKMAILAGDFLLARASVSLARLRNVEVVELLSTVIEHLVKGEVMQSRPQALLDGSGATDDGRAALEYYLHKNYYKTGSLMANSCRAAVLLAGHGEALQAQAFAYGRHVGLAFQLVDDVLDFEQSSEILGKPALNDLRQGLATAPVLLAAQRFPREVAELIKRKFRSEGDVEK 433
            VD+PT+ + D    G  + GG   +D    D+ + L+  P         + +Q  DPF LVE DM  ++  IK +LG+DHPVL A A+Y FE DGGKK+RPTMVLL++RAA AH    G  +       PE+        +Q+RLAEITEMIHTASL HDDVIDEAD RRG PS+NK++G KMA+LAGDFLLAR+SVSLARLRN+E VEL+ST IEHLVKGEVMQ      +  + A DD  +  EYYL KNYYKTGSLM+NSC+AA++L  H E +    FA+GRH+GLAFQL+DDVLD+E  +   GKP L DL+ GL+TAP+LLA + FP  + EL KRKF  EGD+E+
Sbjct:   49 VDEPTVSILD-AAPGYALTGGRIDFDKPMSDVDVPLTYLP--------TDPSQLADPFTLVEQDMVGVTTSIKRILGSDHPVLAAVARYFFEHDGGKKVRPTMVLLMSRAAEAHRRAVGLPL-------PETQSDEYTRAAQQRLAEITEMIHTASLMHDDVIDEADTRRGRPSVNKVFGGKMAVLAGDFLLARSSVSLARLRNLEAVELMSTSIEHLVKGEVMQ------MKNADARDD-ISPFEYYLRKNYYKTGSLMSNSCKAALVLGKHDEHICDLGFAFGRHIGLAFQLIDDVLDYEGVN--TGKPLLADLKSGLSTAPLLLAQEEFP-VLRELAKRKFAEEGDIER 374          
BLAST of NO05G02860 vs. NCBI_GenBank
Match: OQR92468.1 (hypothetical protein THRCLA_08695 [Thraustotheca clavata])

HSP 1 Score: 331.6 bits (849), Expect = 4.000e-87
Identity = 184/347 (53.03%), Postives = 238/347 (68.59%), Query Frame = 0
Query:   88 VDDPTLKVADPRQ--TGMEVEGGYDMQEDLALDLSRRPRPELSSSWVEAAQRVDPFKLVESDMRSLSAGIKSLLGTDHPVLEACAKYLFERDGGKKIRPTMVLLVARAAAAHAPRSGSNVNGHHASDPESPGPLPSQKRLAEITEMIHTASLFHDDVIDEADARRGVPSINKLYGNKMAILAGDFLLARASVSLARLRNVEVVELLSTVIEHLVKGEVMQSRPQALLDGSGATDDGR-AALEYYLHKNYYKTGSLMANSCRAAVLLAGHGEALQAQAFAYGRHVGLAFQLVDDVLDFEQSSEILGKPALNDLRQGLATAPVLLAAQRFPREVAELIKRKFRSEGDVE 432
            VD+PTL + DP    T       +D+  D   D  +     ++ + +      DPF+L++  + S+S  IK++LG+DHPVLEA AKY FE DGGKKIRPTM+LL+++AA A      ++ +  + S         SQ+RLAEITEMIHTASL HDDVIDEAD RRG+ S+NK++G+K++ILAGDFLLAR+S+ LARLR++E VEL+ST IEHLVKGEVMQ R         A  +G+    EYYL KNYYKTGSLMANSCRAA++L  H   +    FAYGRH+GLAFQL+DDVLD++   E  GKP L DL+ GLATAPVLLA + FP  + +L+ RKF + GD+E
Sbjct:   46 VDEPTLSILDPAPGFTAATAHRSFDLMSD--FDRLQNGEAIVNCTHINTPMESDPFELIKDKIVSVSESIKTILGSDHPVLEAVAKYFFENDGGKKIRPTMILLLSQAAEAARDVDNTDKSIEYIS--------ASQQRLAEITEMIHTASLLHDDVIDEADTRRGMKSVNKVFGSKLSILAGDFLLARSSICLARLRSLEAVELMSTAIEHLVKGEVMQMR--------HADKNGQITPFEYYLRKNYYKTGSLMANSCRAALVLGEHSSEVCELGFAYGRHLGLAFQLIDDVLDYK--GENTGKPMLADLKAGLATAPVLLAQEEFP-VLKDLVARKFSNSGDIE 371          
BLAST of NO05G02860 vs. NCBI_GenBank
Match: XP_009823053.1 (hypothetical protein H257_01501 [Aphanomyces astaci] >ETV88190.1 hypothetical protein H257_01501 [Aphanomyces astaci])

HSP 1 Score: 331.3 bits (848), Expect = 5.200e-87
Identity = 189/347 (54.47%), Postives = 238/347 (68.59%), Query Frame = 0
Query:   88 VDDPTLKVADPRQ--TGMEVEGGYDMQEDLALDLSRRPRPELSSSWVEAAQRVDPFKLVESDMRSLSAGIKSLLGTDHPVLEACAKYLFERDGGKKIRPTMVLLVARAAAAHAPRSGSNVNGHHASDPESPGPL-PSQKRLAEITEMIHTASLFHDDVIDEADARRGVPSINKLYGNKMAILAGDFLLARASVSLARLRNVEVVELLSTVIEHLVKGEVMQSRPQALLDGSGATDDGRAALEYYLHKNYYKTGSLMANSCRAAVLLAGHGEALQAQAFAYGRHVGLAFQLVDDVLDFEQSSEILGKPALNDLRQGLATAPVLLAAQRFPREVAELIKRKFRSEGDVE 432
            VD+PT+ + DP    T       +++ +   L L    R   S+  +     VDPF LV+  + S+SA IK +LG+DHPVLEA AKY F+ DGGKKIRPTM+LLV++AA A      S         P+SP  +  SQ+RLAEITEMIHTASL HDDVIDEAD RRG+ S+NK++G+K++ILAGDFLLAR+S+ LARLR++E VEL+ST IEHLVKGEVMQ R     D  G      +  EYYL KNYYKTGSLMANSC+A+++L  H + +    FAYGRH+GLAFQL+DDVLD+  S +  GKP L DLR GLATAPVLLA + FP  + EL+ R F  EGD++
Sbjct:   49 VDEPTMSILDPSPGFTAALRTRSFNLADSYDLPLIHGAR---STRHISDPVTVDPFALVKDSIVSVSANIKMILGSDHPVLEAVAKYFFDNDGGKKIRPTMILLVSQAAEADRVADQSTF-------PKSPEYIAASQQRLAEITEMIHTASLLHDDVIDEADTRRGMQSVNKVFGSKLSILAGDFLLARSSICLARLRSLEAVELMSTAIEHLVKGEVMQMRH---ADKGGTI----SPFEYYLRKNYYKTGSLMANSCKASLVLGDHSDRVCELGFAYGRHLGLAFQLIDDVLDY--SGQNTGKPMLADLRAGLATAPVLLAQEEFP-VLKELVARNFSLEGDID 375          
The following BLAST results are available for this feature:
BLAST of NO05G02860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28148.11.200e-16572.98decaprenyl-diphosphate synthase subunit 1 [Nannoch... [more]
CBN74415.15.700e-9453.56geranyl-diphosphate synthase [Ectocarpus siliculos... [more]
XP_009532096.11.000e-9055.14hypothetical protein PHYSODRAFT_336262 [Phytophtho... [more]
KUF81147.12.900e-9054.49hexaprenyl pyrophosphate synthase [Phytophthora ni... [more]
XP_008902245.15.000e-9054.52hypothetical protein PPTG_09126 [Phytophthora para... [more]
XP_008870257.13.200e-8954.91solanesyl diphosphate synthase [Aphanomyces invada... [more]
XP_002895983.13.200e-8954.57conserved hypothetical protein [Phytophthora infes... [more]
POM67618.12.700e-8854.83Terpenoid synthase [Phytophthora palmivora var. pa... [more]
OQR92468.14.000e-8753.03hypothetical protein THRCLA_08695 [Thraustotheca c... [more]
XP_009823053.15.200e-8754.47hypothetical protein H257_01501 [Aphanomyces astac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL083nonsL083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR121ngnoR121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003622NSK003622Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02860.1NO05G02860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO05G02860.2NO05G02860.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO05G02860.3NO05G02860.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584541gene_3092Nannochloropsis oceanica (N. oceanica CCMP1779)gene
GPPSgene2414Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02860.1NO05G02860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO05G02860.2NO05G02860.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO05G02860.3NO05G02860.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02860 ID=NO05G02860|Name=NO05G02860|organism=Nannochloropsis oceanica|type=gene|length=2447bp
ACAGGACGATCGGGCCTCCACAACGCCACTAGACCGTGCACACGCCTTTC
AAACCCACTGCGTGGCGGATTCAAGGAAAGGTCTAGAGAGCCATGGCCCC
TACATGGAGAGGAGGGGTCCAAGGACTCCAAGCTCTCGTGCAGCATTGTT
CCACCGGCGGGCGGTTGATGGCCCGCCCCAACCCAGGAACCTCCTACGCT
GCGGCCTCACACATCAATGGCAGCTCCACGCTCTTTGATACGCGATTGTA
TTCTAGTGAAGGCAGCACACGGGGCATAGGTAAGCCTAGAACAGCTAGCA
CCCTGAACAGTAGCGAGCCGAAATACATATCTCCTGCCTCTTTCTTGTCC
TTTGCCCCATCTGGGCACATTGCCACGACCTAACGGACCAGTGCCTACCT
CTCTCTAGTAAAGAAGAGTGCCCATTATGTAGAACATGAAAATATGCCAC
ATTCTCAAAACCACGATTTATCTTTCACAACAAATGTCTTCAATCTTCAA
TCCCCTCTCATCTGTGTCCCTGCGCAGGCCAACCTAGTTGGGCTCGGACG
GCCGCGGATGCCTCGATCAATGTTCTGGTAAACGCAGTAACACGGCCAGG
AGTGGACGATCCGACGCTGAAGGTGGCTGATCCTCGACAAACAGGGATGG
AGGTGGAAGGGGGATATGATATGCAGGAAGACTTGGCCTTGGACTTGTCT
CGAAGACCTCGCCCGGAGCTGTCGTCGAGCTGGGTGGAAGCAGCACAGAG
GGTCGATCCATTCAAGgtgcgctaagctacgatccaaatcgctgcgatgt
cttctacaacgtatcactcatcttctctccttccctcatttcctttcagT
TGGTAGAAAGCGATATGAGAAGTCTATCTGCCGGGATCAAGgtatgtcta
tgactttgcaatcccgcgctgacaccatgacgaagcgagaaagagtatga
gaggagttacagcaatttattttgtttgccatagccctaggctcgatccc
acgtaaaagtcgtgctgactcttgcccctttttcctcatcctctctctcc
cccactgtcccccactccctccagTCACTGCTGGGCACCGACCACCCCGT
GCTAGAAGCCTGTGCCAAATACCTCTTCGAGCGGGACGGGGGCAAAAAGA
TCCGTCCGACTATGGTCTTACTAGTCGCACGGGCCGCCGCCGCGCATGCT
CCCAGATCAGGGTCCAATGTGAACGGTCATCACGCTTCAGATCCGGAGTC
CCCTGGGCCCTTGCCCTCCCAGAAACGCCTGGCAGAGATCACAGAGATGA
TTCATACAGCCAGCCTGTTTCACGACGATGTCATTGATGAAGCCGATGCG
CGGCGGGGCGTCCCTTCCATCAACAAATTGTATGGAAACAAAATGGCGAT
TTTGGCGGGGGACTTCCTATTGGCCCGCGCCTCGGTGAGCCTGGCCCGGC
TGCGGAATGTCGAGGTGGTAGAGCTTTTGTCTACGGTCATCGAGCACCTG
GTCAAGGGTGAAGTAATGCAATCGAGGCCTCAGGCCTTGCTGGATGGGAG
TGGAGCTACGGATGATGGGCGGGCGGCGTTGGAGTACTATTTGCACAAGA
ATTACTACAAAACAGGCTCGTTGATGGCAAATTCGTGCCGGGCCGCCGTG
TTATTGGCCGGGCACGGAGAAGCTCTACAGGCGCAGGCGTTTGCGTATGG
CAGGCATGTGGGACTGGCCTTTCAGTTGGTGGACGATGTGTTGGATTTCG
AGCAGTCGTCTGAGATATTAGGCAAACCCGCGTTGAACGACCTGAGACAG
GGCCTGGCGACGGCCCCTGTCCTCTTGGCTGCACAAAGGTTCCCACGGGA
GGTGGCGGAGCTGATTAAGCGCAAGTTTCGATCTGAGGGGGATGTGGAGA
AGgtaaggagaggaagaaaaggacgtggtggtgcggtttgtcgtctcttg
aaaaagtggatgcatcttacgcacgcctcttcttttctgcgtgacatttt
atacgtattgaaaatacttttcattctccaattgtctttctacagGCACT
CGAGTTGGTAGAACGCGGCGATGGGCTGCGGCAAGCGAAAGATCTAGCAT
CGGTACAGGCGGAGCAGGCTATGGAAGCGGCTTTGACCATGCATCCTTCC
CCCGCTCGGGACGGTCTTATCAAGCTGGCCTCGCTCGTTGTACACCGCAC
GAGTTAAACCATAGAGGCACCAGACGGGAAGACCGGAATAACCTGGTGAA
GCTGGTGGTAGGCAGGGGGGAGGAATCGGGGAGAGTGCCATATCTTGAGA
GAGGGGACCAAATGACTGTTGATAACCTGCCCATTGGCTTTTCCTCCTTG
TTGCCGCCGCCAGCGCAACACCCATCCACTCACTCACACAAATCTTTCAA
ATGTATCAAACAAAGATAGAACGGAAACAGCTACCATCACATGATCA
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protein sequence of NO05G02860.1

>NO05G02860.1-protein ID=NO05G02860.1-protein|Name=NO05G02860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=486bp
MAPTWRGGVQGLQALVQHCSTGGRLMARPNPGTSYAAASHINGSSTLFDT
RLYSSEGSTRGIGQPSWARTAADASINVLVNAVTRPGVDDPTLKVADPRQ
TGMEVEGGYDMQEDLALDLSRRPRPELSSSWVEAAQRVDPFKLVESDMRS
LSAGIKSLLGTDHPVLEACAKYLFERDGGKKIRPTMVLLVARAAAAHAPR
SGSNVNGHHASDPESPGPLPSQKRLAEITEMIHTASLFHDDVIDEADARR
GVPSINKLYGNKMAILAGDFLLARASVSLARLRNVEVVELLSTVIEHLVK
GEVMQSRPQALLDGSGATDDGRAALEYYLHKNYYKTGSLMANSCRAAVLL
AGHGEALQAQAFAYGRHVGLAFQLVDDVLDFEQSSEILGKPALNDLRQGL
ATAPVLLAAQRFPREVAELIKRKFRSEGDVEKALELVERGDGLRQAKDLA
SVQAEQAMEAALTMHPSPARDGLIKLASLVVHRTS*
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protein sequence of NO05G02860.2

>NO05G02860.2-protein ID=NO05G02860.2-protein|Name=NO05G02860.2|organism=Nannochloropsis oceanica|type=polypeptide|length=485bp
MAPTWRGGVQGLQALVQHCSTGGRLMARPNPGTSYAAASHINGSSTLFDT
RLYSSEGSTRGIGQPSWARTAADASINVLVNAVTRPGVDDPTLKVADPRQ
TGMEVEGGYDMQEDLALDLSRRPRPELSSSWVEAAQRVDPFKLVESDMRS
LSAGIKSLLGTDHPVLEACAKYLFERDGGKKIRPTMVLLVARAAAAHAPR
SGSNVNGHHASDPESPGPLPSQKRLAEITEMIHTASLFHDDVIDEADARR
GVPSINKLYGNKMAILAGDFLLARASVSLARLRNVEVVELLSTVIEHLVK
GEVMQSRPQALLDGSGATDDGRAALEYYLHKNYYKTGSLMANSCRAAVLL
AGHGEALQAQAFAYGRHVGLAFQLVDDVLDFEQSSEILGKPALNDLRQGL
ATAPVLLAAQRFPREVAELIKRKFRSEGDVEKVRRGRKGRGGAVCRLLKK
WMHLTHASSFLRDILYVLKILFILQLSFYRHSSW*
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protein sequence of NO05G02860.3

>NO05G02860.3-protein ID=NO05G02860.3-protein|Name=NO05G02860.3|organism=Nannochloropsis oceanica|type=polypeptide|length=384bp
MEVEGGYDMQEDLALDLSRRPRPELSSSWVEAAQRVDPFKLVESDMRSLS
AGIKSLLGTDHPVLEACAKYLFERDGGKKIRPTMVLLVARAAAAHAPRSG
SNVNGHHASDPESPGPLPSQKRLAEITEMIHTASLFHDDVIDEADARRGV
PSINKLYGNKMAILAGDFLLARASVSLARLRNVEVVELLSTVIEHLVKGE
VMQSRPQALLDGSGATDDGRAALEYYLHKNYYKTGSLMANSCRAAVLLAG
HGEALQAQAFAYGRHVGLAFQLVDDVLDFEQSSEILGKPALNDLRQGLAT
APVLLAAQRFPREVAELIKRKFRSEGDVEKALELVERGDGLRQAKDLASV
QAEQAMEAALTMHPSPARDGLIKLASLVVHRTS*
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Synonyms
Publications