NO04G03780, NO04G03780 (gene) Nannochloropsis oceanica

Overview
NameNO04G03780
Unique NameNO04G03780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3301
Alignment locationchr4:1018775..1022075 +

Link to JBrowse

Properties
Property NameValue
Descriptioncationic amino acid transporter 9
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1018775..1022075 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006122mitochondrial electron transport, ubiquinol to cytochrome c
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005750mitochondrial respiratory chain complex III
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR036544QCR7_sf
IPR002293AA/rel_permease1
IPR029485CAT_C
IPR003197QCR7
Homology
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BLAST of NO04G03780 vs. NCBI_GenBank
Match: EWM28674.1 (amino acid permease-associated region [Nannochloropsis gaditana])

HSP 1 Score: 583.6 bits (1503), Expect = 6.900e-163
Identity = 333/567 (58.73%), Postives = 368/567 (64.90%), Query Frame = 0 
Query:    4 SSKSASFWSHLLGRAFHKKCDAEEPGLRPPSPTESFKSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQAGTVFLYNHITFGELPALLG---------------HRDGGRTKCDFDEY------------------------------------------------------------------------------------------QVFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLVQRSTTRVNTTRWLVLLLPACALPFALHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVLWAGLLVHYVWTEHQYFHGNGEKRGRQFGERSGSRRYEGTENG 466
            + + ASFW H+  RA H K +A   G  P         + G DGH  F HLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAA AGPAVVFS+IFSGIIAAIDALCYSEMASRYPQAGTVFLY H+TFGELPALL                 R       DF ++                                                                                           VFFSYVGFDTIASSSEEC+DPLRD+PRAILVSL  CVGIYC VCL+LTGMVP+D IDLAAPLSSAFAGLGLAWV AVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLP  LA IHPRFKTP  AQ LCG LPM L+AFFNV+LL+ELLD+GVILAYGTVCAA+L+QRST RV TTR LV LLPACALP +LHKY   TGI A+DT + L P+  LVPL+RPGDY AP  GVCFACPAVPY+P+AGVVLNVYL VNL + AW RL +LW G+L++YVWTE+ YF    ++R          R  + TENG
Sbjct:    4 NGRPASFWRHIHDRALHLKSEA---GADP--------DTEGDDGHVHFQHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAAGAGPAVVFSYIFSGIIAAIDALCYSEMASRYPQAGTVFLYTHVTFGELPALLVSINLLVDYTVAAALISRSFALYLVDFLKHAGLGPVPAWLAPVPVTELFSLSLVAPLLLLLHTLVLCRGTETGAVLNAILTSAKVAVILLVCALGLFHVQPRHWLPFFPRGLEAVFRTSSTVFFSYVGFDTIASSSEECQDPLRDMPRAILVSLATCVGIYCAVCLVLTGMVPFDAIDLAAPLSSAFAGLGLAWVQAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPAALARIHPRFKTPVNAQALCGFLPMALAAFFNVRLLSELLDIGVILAYGTVCAALLLQRSTRRVYTTRCLVALLPACALPLSLHKYKASTGILALDTAIWLSPLFVLVPLLRPGDYLAPPPGVCFACPAVPYVPVAGVVLNVYLAVNLPAVAWARLFILWTGILLYYVWTEYGYFLRGDDRRDVGARRTRKERPKDVTENG 559
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BLAST of NO04G03780 vs. NCBI_GenBank
Match: GAQ84323.1 (cationic amino acid transporter [Klebsormidium nitens])

HSP 1 Score: 250.8 bits (639), Expect = 1.100e-62
Identity = 175/512 (34.18%), Postives = 246/512 (48.05%), Query Frame = 0 
Query:   54 LKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQAGTVFLYNHITFGELPALLGHRD-----------------------------------------------GGRTKCDF----------------------------------------------------------------DEYQVFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPG-FLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLVQR-------------STTRVNTTRW---LVLLLPACALPFALHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRL-AVLWAGLLVHYVWTEH 437
            L R+LG W LT+LG+G SIG+G+F +TGVAA  AGPAV  SF+ +G+ +A+DALCY+E+A+R+P  G+ +LY ++TF ELPA L                                                   GG    +F                                                                    VFF+YVGFD +A+++EE K+P RDLP  I+ SL VC  +Y  VCL+LTGMVPY  +D  +PLSSAF+  GLA++  +I LG VVGL TTLL+GL+AQ+R+++G+ RDGLLP  F A++ P   TP RAQ   G++   L+ FF+V  L+ +L VGV+ AYG VC  ++  R                  N TRW    + +    AL FA        G + +  + L       +PL+    Y   A    F+CP VP LPL G+  NVYL   ++  A++RL AV    +L++  + +H
Sbjct:   81 LTRRLGPWDLTLLGIGASIGSGIFVVTGVAARQAGPAVALSFLLAGLASALDALCYAELAARFPALGSAYLYTYLTFSELPAFLVFSHLMFDYHISAASIARSLAGYTVKLLVRILPFTAPYIPQWLAGGGLSLLGGLLSVNFLAPLILLALTLLLCQGVKESSTINAVMTCTKVAIVLLVVAVGTSEVDPANWVPFAPSGLPAVVSTSTLVFFAYVGFDAVANTAEESKNPQRDLPVGIIGSLAVCTLLYVSVCLVLTGMVPYTQLDPESPLSSAFSAKGLAFIEGIIDLGAVVGLTTTLLVGLYAQSRLYMGVGRDGLLPARFFAQVSPLHHTPVRAQAWVGLVAGTLALFFDVSRLSHILSVGVLTAYGVVCMCIISLRLDPGHCPRGGRFAFPALDNLTRWQEGTLCMAAVAALVFAGGIAARLGGGFGVLALFLAXXXXXXLPLILRQGYKTHAG---FSCPLVPGLPLLGMAFNVYLLAQMHWEAYVRLVAVTILSILLYAFYGQH 589
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BLAST of NO04G03780 vs. NCBI_GenBank
Match: OAE28571.1 (hypothetical protein AXG93_2175s1550 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 241.5 bits (615), Expect = 6.400e-60
Identity = 169/506 (33.40%), Postives = 245/506 (48.42%), Query Frame = 0 
Query:   54 LKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYP-QAGTVFLYNHITFGELPALL------------------------------------------------------------------------GHRD---------------------GGRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLV--------------QRSTTRVNTTRWLV-LLLPACALPFAL---HKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVLWAGLLVHY 432
            L+R+LG W L +LG+G SIGAG+F +TG  A  AGP VV SF+ +G  + ++ALCY+E++SR+P   G  +LY + TF EL A +                                                                        G R+                      G  + D   +                 VFF+YVGFD +A+S+EE K P +DLPRAI++S+  C  +Y  VCL++TGMVPY  +D AAPL+SAF   GL ++ ++I +G V GL TT+LIGL+ Q+R++LG+ RDGLLP   A+++ +  TP  AQ+  G++   L+ F NV  L+ +L VG+++ Y  VCA V+V              Q     V  T+  V   L   AL FA+   ++Y  H    A    LLLL +   VP+    +Y  P+    FACPAVP LPL  +++N++L   L+  AW+R AV+    L+ Y
Sbjct:   39 LERKLGLWDLILLGIGASIGAGIFVVTGTVAQDAGPGVVLSFLLAGGASILNALCYAELSSRFPAHVGGAYLYAYFTFNELTAFIVFVNVMFDYHIGAASVIRSLASYLATLLKLIPAFSILPEVFGPGGKEFYGGWVSINLMAPILLTIITFVLCQGVRESAIVNGVMTVTKIVIVLLVVLAGSFEVDVSNWTPFAPFGLPAIVQGATVVFFAYVGFDAVANSAEETKHPQKDLPRAIIISVLSCALLYVAVCLVVTGMVPYYELDAAAPLTSAFISKGLNFMSSLIGVGAVAGLTTTVLIGLYVQSRLYLGVGRDGLLPSLFAKVNSKHHTPVIAQIWVGIVAGVLATFINVSHLSHILSVGILIGYSVVCACVVVLRVLPEEQWRSDERQGGAKDVRRTQGAVGCTLVTAALGFAIGLCYRYGAHP---AFAISLLLLELLCAVPMYTHQEYFEPSG---FACPAVPTLPLFSILVNMFLFAQLHWEAWVRFAVVTLLALILY 538
[Close]
BLAST of NO04G03780 vs. NCBI_GenBank
Match: PTQ35486.1 (hypothetical protein MARPO_0071s0097 [Marchantia polymorpha])

HSP 1 Score: 241.5 bits (615), Expect = 6.400e-60
Identity = 169/506 (33.40%), Postives = 245/506 (48.42%), Query Frame = 0 
Query:   54 LKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYP-QAGTVFLYNHITFGELPALL------------------------------------------------------------------------GHRD---------------------GGRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLV--------------QRSTTRVNTTRWLV-LLLPACALPFAL---HKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVLWAGLLVHY 432
            L+R+LG W L +LG+G SIGAG+F +TG  A  AGP VV SF+ +G  + ++ALCY+E++SR+P   G  +LY + TF EL A +                                                                        G R+                      G  + D   +                 VFF+YVGFD +A+S+EE K P +DLPRAI++S+  C  +Y  VCL++TGMVPY  +D AAPL+SAF   GL ++ ++I +G V GL TT+LIGL+ Q+R++LG+ RDGLLP   A+++ +  TP  AQ+  G++   L+ F NV  L+ +L VG+++ Y  VCA V+V              Q     V  T+  V   L   AL FA+   ++Y  H    A    LLLL +   VP+    +Y  P+    FACPAVP LPL  +++N++L   L+  AW+R AV+    L+ Y
Sbjct:   46 LERKLGLWDLILLGIGASIGAGIFVVTGTVAQDAGPGVVLSFLLAGGASILNALCYAELSSRFPAHVGGAYLYAYFTFNELTAFIVFVNVMFDYHIGAASVIRSLASYLATLLKLIPAFSILPEVFGPGGKEFYGGWVSINLMAPILLTIITFVLCQGVRESAIVNGVMTVTKIVIVLLVVLAGSFEVDVSNWTPFAPFGLPAIVQGATVVFFAYVGFDAVANSAEETKHPQKDLPRAIIISVLSCALLYVAVCLVVTGMVPYYELDAAAPLTSAFISKGLNFMSSLIGVGAVAGLTTTVLIGLYVQSRLYLGVGRDGLLPSLFAKVNSKHHTPVIAQIWVGIVAGVLATFINVSHLSHILSVGILIGYSVVCACVVVLRVLPEEQWRSDERQGGAKDVRRTQGAVGCTLVTAALGFAIGLCYRYGAHP---AFAISLLLLELLCAVPMYTHQEYFEPSG---FACPAVPTLPLFSILVNMFLFAQLHWEAWVRFAVVTLLALILY 545
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BLAST of NO04G03780 vs. NCBI_GenBank
Match: XP_021755249.1 (cationic amino acid transporter 9, chloroplastic-like [Chenopodium quinoa])

HSP 1 Score: 235.0 bits (598), Expect = 6.000e-58
Identity = 168/531 (31.64%), Postives = 252/531 (47.46%), Query Frame = 0 
Query:   31 RPPSPTESFKSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITFGELPALL--------------------------------------------GHRD-------------------------------------------------GGRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVL---VQRSTTRVNTTRW--------LVLLLPACALPFALHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVLWAGLLVHYVWTEHQYFH 441
            +P +P  S   ++  +G      L R+LG ++L ++G+G SIGAG+F +TG  A  AGPAV   FI +G+   ++ALCY+E+ASR+P   G  +LY +  F EL A L                                            G +D                                                  G  K D   +                 VFF+YVGFD +A+S+EE K+P RDLP  I+ SL +C+G+Y  VCL++TGMVPY+++   APL++AF   GL +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP   A++HP+  TP  +Q+  G++   ++   NV +L+ +L VG +  Y  V A VL    +  +   ++TRW        L+L+L AC    A   Y      + +  I L++ I ALV L     Y   +H   F+CPAVP+LP   +  N++L   L+  AW+R  V    L+   ++  +  FH
Sbjct:   34 KPLAPNSSDVRTNSGEG------LVRRLGLFELVLIGIGASIGAGIFVVTGTVAHDAGPAVTLCFILAGVSCILNALCYAELASRFPAVVGGAYLYTYSAFNELTAFLVFAQLMLDYHIGAASIARSLASYAIALLELFPSIKGNIPNWIGHGTKDYLGVFSINVLAPILLFILTIVLCWGVGESSIVNSFMTVTKVVIVIIVIISGAFKVDVSNWSPFAPNGYGAVLTGATVVFFAYVGFDAVANSAEESKNPQRDLPLGIIGSLLICIGLYIGVCLVITGMVPYNLLGEEAPLAAAFTSKGLKFVSVLISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPKLFAKVHPKRHTPINSQVWVGLVASVMAGLLNVHVLSHILSVGTLTGYSVVAACVLSLRFEEKSPGQSSTRWCSKWAEGVLLLVLLACCGFGAGLTYRFGASFYFL-IIPLVIAIVALVALYVRQVY---SHPPGFSCPAVPFLPALCIFFNMFLFAQLHYEAWVRFVVF--SLITVGIYAFYGQFH 552
[Close]
BLAST of NO04G03780 vs. NCBI_GenBank
Match: XP_021863991.1 (cationic amino acid transporter 9, chloroplastic [Spinacia oleracea] >KNA26095.1 hypothetical protein SOVF_000150 [Spinacia oleracea])

HSP 1 Score: 233.4 bits (594), Expect = 1.700e-57
Identity = 174/558 (31.18%), Postives = 262/558 (46.95%), Query Frame = 0 
Query:    4 SSKSASFWSHLLGRAFHKKCDAEEPGLRPPSPTESFKSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITFGEL------------------------------------------PALLGHRD---------------------------------------------------GGRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVL----VQRSTTRVNTTRW-------LVLLLPACALPFALHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVLWAGLLVHYVWTEHQYFH 441
            SS S++++SH    A   K         P +P  S   ++  DG      L R+LG  +L ++GVG SIGAG+F +TG  A   GPAV   FI +G    ++ALCY+E++SR+P   G  +LY +  F EL                                          P+ +GH                                                      G  K D   +                 VFF+YVGFD +A+S+EE K+P RDLP  I+ SL +C+G+Y  VCL++TGMVPYD++   APL+SAF   GL +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP   A++HP+  TP  +Q+  G++   ++   NV +L+ +L VG +  Y  V A VL     ++S ++ +T+R+       + L++ AC    A   Y      + +  I L++ +AALV L     Y  P     F+CPAVP+LP   +  N++L   L+  AW+R  V+   L+   ++  +  FH
Sbjct:   14 SSSSSNWFSHFWESARRSK---------PLAPNSSDVHTNSGDG------LVRRLGLLELVLIGVGASIGAGIFVVTGTVARDVGPAVTLCFILAGASCILNALCYAELSSRFPAVVGGAYLYTYSAFNELTAFLVFAQLMLDYHIGAASIARSLASYAVALLELFPSIKGNIPSWIGHGTDDFLGVFSFNALAPILLFILTLVLCRGVGESSIVNSFMTVTKVVIVIVVIVSGAFKVDVSNWSPFAPNGYGAVLTGATVVFFAYVGFDAVANSAEESKNPQRDLPLGIIGSLLICIGLYIGVCLVITGMVPYDLLGEDAPLASAFTSKGLKFVSVLISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPKLFAKVHPKRHTPVNSQIWVGLVASVMAGLLNVHVLSHILSVGTLTGYSVVAACVLSLRFEEKSPSQASTSRFSKWAEGVIYLVVLACCGFGAGLTYRFGASYFFL-IIPLVIALAALVALYVRQVYSNPPG---FSCPAVPFLPALCIFFNMFLFAQLHYEAWVRFLVV--SLITLGIYAFYGQFH 550
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BLAST of NO04G03780 vs. NCBI_GenBank
Match: XP_008366679.1 (PREDICTED: cationic amino acid transporter 9, chloroplastic-like isoform X1 [Malus domestica])

HSP 1 Score: 231.9 bits (590), Expect = 5.100e-57
Identity = 170/559 (30.41%), Postives = 254/559 (45.44%), Query Frame = 0 
Query:    8 ASFWSHLLGRAFHKKCDAEEPGLRPPSPTESFKSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITFGELPALL------------------------------------------GHRD----------------------------------------------------GGRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLVQR----STTRVNTTRW----LVLLLPACALPFA--LHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVLWAGLLVHYVWTEHQYFHGNGEK 446
            +S WSH    A   K           SP+ES   ++  DG      L R+LG + L +LGVG SIGAG+F +TG  A  AGP V  SFI +G    ++ALCY+E+ASR+P   G  +LY +  F EL A L                                          GH                                                       G  + D   +                 VFF+YVGFD +A+S+EE K P RDLP  I+ SL +CV +Y  VCL++TGMVP+ ++   APL++AF   GL +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP   A +HP+ +TP  +Q+  G++   L+  FNVK+L+ +L VG +  Y  V A V+  R    +   V+++ W    + L + AC    A   ++++       +  ++ +L +AAL       D P       F+CP VPY+P   +  N++L   ++  AW+R  +L   ++  Y +    +   N E+
Sbjct:   22 SSCWSHFWSSALRTK--------PLVSPSESAVRTNSGDG------LVRRLGMFDLILLGVGASIGAGIFVVTGTVAKDAGPGVTISFILAGASCVLNALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFAQLMLDYHIGAASIARSLASYIITILELFPVFKDHIPDWIGHGGQKFLGGAISINVLAPILLALLTIXLCRGVGESSAVNSFMTAMKIIIVIIVIFAGAFEVDVSNWTPFTPNGFKPILTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLICVALYIGVCLVITGMVPFYLLGEDAPLANAFTSKGLXFVSILISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSVFARVHPKLRTPIHSQVWVGIVSGILAGLFNVKILSHILSVGSLTGYSVVAACVVSLRFKGKAANEVSSSXWREGVICLFIVACGGFGAGLCYRFSASIVFLVLTVVVAILALAALCFRQVYADLPG------FSCPGVPYVPAVCIFFNMFLFAQIHHEAWVRFVILSIIVVGTYAFYGQYHADPNSEE 560
[Close]
BLAST of NO04G03780 vs. NCBI_GenBank
Match: XP_008366680.1 (PREDICTED: cationic amino acid transporter 9, chloroplastic-like isoform X2 [Malus domestica])

HSP 1 Score: 231.9 bits (590), Expect = 5.100e-57
Identity = 170/559 (30.41%), Postives = 254/559 (45.44%), Query Frame = 0 
Query:    8 ASFWSHLLGRAFHKKCDAEEPGLRPPSPTESFKSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITFGELPALL------------------------------------------GHRD----------------------------------------------------GGRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLVQR----STTRVNTTRW----LVLLLPACALPFA--LHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVLWAGLLVHYVWTEHQYFHGNGEK 446
            +S WSH    A   K           SP+ES   ++  DG      L R+LG + L +LGVG SIGAG+F +TG  A  AGP V  SFI +G    ++ALCY+E+ASR+P   G  +LY +  F EL A L                                          GH                                                       G  + D   +                 VFF+YVGFD +A+S+EE K P RDLP  I+ SL +CV +Y  VCL++TGMVP+ ++   APL++AF   GL +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP   A +HP+ +TP  +Q+  G++   L+  FNVK+L+ +L VG +  Y  V A V+  R    +   V+++ W    + L + AC    A   ++++       +  ++ +L +AAL       D P       F+CP VPY+P   +  N++L   ++  AW+R  +L   ++  Y +    +   N E+
Sbjct:   22 SSCWSHFWSSALRTK--------PLVSPSESAVRTNSGDG------LVRRLGMFDLILLGVGASIGAGIFVVTGTVAKDAGPGVTISFILAGASCVLNALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFAQLMLDYHIGAASIARSLASYIITILELFPVFKDHIPDWIGHGGQKFLGGAISINVLAPILLALLTIXLCRGVGESSAVNSFMTAMKIIIVIIVIFAGAFEVDVSNWTPFTPNGFKPILTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLICVALYIGVCLVITGMVPFYLLGEDAPLANAFTSKGLXFVSILISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSVFARVHPKLRTPIHSQVWVGIVSGILAGLFNVKILSHILSVGSLTGYSVVAACVVSLRFKGKAANEVSSSXWREGVICLFIVACGGFGAGLCYRFSASIVFLVLTVVVAILALAALCFRQVYADLPG------FSCPGVPYVPAVCIFFNMFLFAQIHHEAWVRFVILSIIVVGTYAFYGQYHADPNSEE 560
[Close]
BLAST of NO04G03780 vs. NCBI_GenBank
Match: OMP00735.1 (Amino acid/polyamine transporter I [Corchorus olitorius])

HSP 1 Score: 231.9 bits (590), Expect = 5.100e-57
Identity = 164/499 (32.87%), Postives = 242/499 (48.50%), Query Frame = 0 
Query:   38 SFKSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITFGE-----------------------------------LPALLGH-----RDGGR----------------------------------------TKCDFDEYQVFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLVQRSTTRVNT-------TRW---LVLLLPACALPFA---LHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVLWAGLLVHYVWTEHQYFHGN 443
            S+++++G+D       L R+LG   L +LG+G SIGAG+F +TG  A  AGP V  SFI +G    ++ALCY+E+ASR+P   G  +LY++  F E                                   +P L G+       GG+                                        TK       VFFSYVGFD +A+S+EE K P RDLP  IL SL VCV +Y  VCL++TGMVPY ++   APL+ AF   GL +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP   A++HP+  TP  +Q+  G++   L   FNV +L+ +L VG +  Y  V A V+  R   +          + W   ++ L+   +  FA   L++Y+       +  ++ +L  AAL       D       + F+CP VP LP   +  N++L   L+  AW+R  VL   ++   ++  +  FH N
Sbjct:   37 SYRTATGRD------DLVRRLGVLDLLLLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVLNALCYAELASRFPAVVGGAYLYSYTAFNEITAFLVFMQLMLDYHIGAASIARSLASYVAALFELIPGLKGNIPAWIGQGGQEFFGGTLSINILAPVLLVLLTIILCWGVGESSAVNSFMTATKILTGATVVFFSYVGFDAVANSAEESKRPQRDLPIGILGSLLVCVVLYVGVCLVITGMVPYYLLGEEAPLADAFTSKGLKYVSILISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSLFAKVHPKRHTPIHSQIWVGIVAAVLGGIFNVHVLSHILSVGSLTGYSVVAACVVTLRWKNKTGNPASSKCISTWCEGVICLIIVASCGFATGVLYRYDASFFYIIVAAVIAVLACAALCFRQVYSD------ALGFSCPGVPILPAVCIFFNIFLFAQLHYEAWIRFIVL--SIISVGIYAFYGQFHAN 521
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BLAST of NO04G03780 vs. NCBI_GenBank
Match: XP_021756382.1 (cationic amino acid transporter 9, chloroplastic-like [Chenopodium quinoa])

HSP 1 Score: 231.1 bits (588), Expect = 8.700e-57
Identity = 165/510 (32.35%), Postives = 243/510 (47.65%), Query Frame = 0 
Query:   54 LKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITFGELPALL--------------------------------------------GHRD-------------------------------------------------GGRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVL----VQRSTTRVNTTR---------WLVLLLPACALPFALHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVLWAGLLVHYVWTEHQYFH 441
            L R+LG ++L ++G+G SIGAG+F +TG  A  AGPAV   FI +G+   ++ALCY+E+AS +P   G  +LY +  F EL A L                                            G +D                                                  G  K D   +                 VFF+YVGFD +A+S+EE K+P RDLP  I+ SL +C+G+Y  VCL++TGMVPY+++   APL++AF   GL +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP   A++HP+  TP  +Q+  G++   ++   NV +L+ +L VG +  Y  V A VL     ++S ++ +T R         WLVLL  AC    A   Y      + +  I L++ I ALV L     Y   +H   F+CPAVP+LP   +  N++L   L+  AW+R  V    L+   ++  +  FH
Sbjct:   51 LVRRLGLFELVLIGIGASIGAGIFVVTGTVAHDAGPAVTLCFILAGVSCILNALCYAELASCFPAVVGGAYLYTYSAFNELTAFLVFAQLMLDYHIGAASIARSLASYAIALLELFPSIKGNIPNWIGHGTKDFLGVFSINVLAPILLFILTIVLCWGVGESSIVNSFMTVTKVVIVIIVIISGAFKVDVSNWAPFAPNGYGAVLTGATVVFFAYVGFDAVANSAEESKNPQRDLPLGIIGSLLICIGLYIGVCLVITGMVPYNLLGEEAPLAAAFTSKGLKFVSVLISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPKLFAKVHPKRHTPINSQVWVGLVASVMAGLLNVHVLSHILSVGTLTGYSVVAACVLSLRFEEKSPSQASTRRCSKWAEGVLWLVLL--ACCGFGAGLTYRFGASFYFL-VIPLVIAIVALVALYVRQVY---SHPPGFSCPAVPFLPALCIFFNIFLFAQLHYEAWVRFVVF--SLITVGIYAFYGQFH 552
The following BLAST results are available for this feature:
BLAST of NO04G03780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28674.16.900e-16358.73amino acid permease-associated region [Nannochloro... [more]
GAQ84323.11.100e-6234.18cationic amino acid transporter [Klebsormidium nit... [more]
OAE28571.16.400e-6033.40hypothetical protein AXG93_2175s1550 [Marchantia p... [more]
PTQ35486.16.400e-6033.40hypothetical protein MARPO_0071s0097 [Marchantia p... [more]
XP_021755249.16.000e-5831.64cationic amino acid transporter 9, chloroplastic-l... [more]
XP_021863991.11.700e-5731.18cationic amino acid transporter 9, chloroplastic [... [more]
XP_008366679.15.100e-5730.41PREDICTED: cationic amino acid transporter 9, chlo... [more]
XP_008366680.15.100e-5730.41PREDICTED: cationic amino acid transporter 9, chlo... [more]
OMP00735.15.100e-5732.87Amino acid/polyamine transporter I [Corchorus olit... [more]
XP_021756382.18.700e-5732.35cationic amino acid transporter 9, chloroplastic-l... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009419NSK009419Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03780.1NO04G03780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|295463gene_2161Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g111gene1823Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03780.1NO04G03780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03780 ID=NO04G03780|Name=NO04G03780|organism=Nannochloropsis oceanica|type=gene|length=3301bp
ATGGTACCCTCCAGCAAGTCGGCATCTTTTTGGAGCCATTTATTAGGCCG
GGCCTTCCACAAGAAGTGCGACGCTGAAGAGCCAGgtgactgtttgcttg
tttgtggtgaagagtggtctcttgccccacactattctccccgcgtgtga
aagctctgtatgcggcacacaagccaaccgccaccgaattgtactagtgc
gtgtcaaaataaaagtcgactctccttgtcctttccagcgcagtgccacc
tgcttctttgctccagtacaatgatgcccccagccccatccgaggccccc
agcaatctcacgccacctcttccccccctctattccccccgacaaaacag
GCCTACGGCCCCCGTCGCCCACAGAGTCTTTCAAGTCAAGCAGCGGCAAA
GATGGCCACCATGTATTTCACCACCTAAAGCGCCAACTCGGTTTCTGGCA
GTTGACGATGCTGGGCGTCGGTGGCTCAATTGGCGCTGGCGTTTTCTCCC
TGACCGGGGTCGCTGCCGCAAGCGCGGGCCCGGCAGTCGTGTTTAGCTTC
ATCTTCAGCGGTATCATAGCGGCCATCGACGCGTTGTGCTATTCGGAGAT
GGCTTCACGGTACCCTCAAGCGGGAACTGTCTTTTTGTACAATCATATCA
CGTTTGGAGAGCTCCCTGCCCTGCTTgtgagtataaatttgttggtggat
tacactgtggctgctgctttgattgcccgctcttttgccttgtatcttgt
tgaatttctcaagcatgctggcttagggccccttccttcatggttggctt
cttggccacttacggatatcataagtctaagtcttgttgcccccctcctt
ctacttctcctcactctcgtcctgtgtagGGGCACCGAGACGGGGGCCGT
ACTAAATGTGATTTTGACGAGTATCAAGgtcggtgtcattttgattgtgt
gcgctgtagggctcttccatgtacacccgcccaattgggtgcctttcttc
ccgcatgggatcgagagtgtgtttcgaacctcttccacagTTTTTTTTTC
TTATGTAGGCTTCGACACCATAGCTTCTTCCTCTGAAGAATGCAAGGATC
CTTTGCGGGATTTGCCACGTGCAATCCTAGTGAGTCTGGGCGTGTGCGTG
GGTATCTATTGTGTTGTTTGTTTAATTTTGACTGGCATGGTGCCTTACGA
TATGATTGATCTGGCTGCACCGCTTTCGTCGGCTTTTGCGGGGTTGGGAT
TAGCGTGGGTTCCGGCTGTGATTAGTCTGGGGGGGGTTGTTGGGCTTGCG
ACTACGCTTTTGATTGGTTTGTTTGCACAGGCAAGGATCTGGTTGGGGAT
AGCCCGGGATGGTCTTTTGCCAGGCTTCCTGGCGGAGATTCACCCACGAT
TTAAAACGCCGTTTAGAGCGCAGATGTTGTGTGGTGTATTACCTATGTGT
TTGTCTGCCTTTTTCAACGTGAAATTACTGGCGGAGTTGCTGGATGTGGG
AGTTATTTTGGCGTATGGCACAGTTTGTGCGGCTGTCTTAGTGCAGCGGT
CGACGACAAGAGTAAATACGACCAGATGGCTTGTGTTGCTGCTGCCGGCG
TGTGCTTTGCCGTTTGCATTGCATAAATACAACGTACACACGGGAATTTG
GGCCATGGACACAATCCTTTTATTGCTCCCGATTGCTGCGTTGGTGCCTT
TGGTACGACCGGGAGATTACCCGGCGCCTGCGCATGGTGTGTGTTTTGCT
TGCCCGGCTGTGCCTTATCTACCGCTGGCGGGAGTGGTTCTCAACGTATA
TTTAGGGGTAAATTTGAATAGTGCCGCGTGGTTGCGTTTGGCAGTGCTGT
GGGCGGGCTTGTTGGTGCATTATGTTTGGACGGAACACCAGTATTTTCAT
GGAAATGGGGAGAAGCGTGGAAGGCAGTTTGGAGAGAGAAGTGGCAGCAG
ACGTTATGAAGGAACAGAGAACGGTGTGgtaccttaccctccgttcgaat
cgttgcggcgccgtcgtggggtcggggggggagggtcaggacaatctcag
tttggtggtggagggggggaggaggaggagggggggagaattcatctcgg
acgcccttgttggacggggacgacgccgtgtagacttacgtgtacagaca
agcacacataaaatacgatctgttcaaaaataatgcaaaagaaatgatca
aattcaaatgacgagggagaggtgatcatagaacgaccttcttcttttgt
tcgttttcaaatcgggaaagcattgccaataagcgaggcaagagcgaggg
tggacccgcaagaagtgcatccaacacccgagcaaagacaagaaccattg
caaaaccagcgccctggaggcttacagcgaccattggtccccatcccatc
cctctatattacctattttgaacgagagggctgttggaagaagttggacg
ataggcgaagtctttggctaactcgcaaacataaattcaggacaagcctt
cttaccctcacttctttcattcactcatggctggctgcactgtcaaaacc
cacactacatacgcagCACTCTACCATGTCCGTCGTGGCCAAGATCTGGG
ACAGCCTGCGAACGTCCTACACCAGGATGGTGGTGGGAGAGCTCAACAAC
TACGgtacgtcttgcttaagcctgctagacgtgggctccccccatttcta
ccggcttgttgtcgtcaagtcctgttgttctctctttctatcccttctcc
tgctgcgagatgtacgtgcacgtgtcaatggtcttgtcgtgtctgctgag
ggcaggcccttattcgagctaaactctgcctcccatcccatcatcgtgct
tggaggctgccagtatttgccatcctctacgccttgacaatgtgcgccct
atgcttgtggccacgtcaagcttttcttctcttgtagtgcaagctttttt
tatggttatctgttttgatttttccttcctccctcacatcttttcaccga
attcctctccgacgaactcacccacctacctcatatcccctccttcccct
tcccctcagGCCTGCGTTACCAAGATCTCTTCATAGAAGATCCCGCGGTG
ATCAAGGCAGTCCACCACCTTTCTCCCGAAGAACAAGTCTCCCGTGAACG
CCGAATTAAGCGCGCCATCGAGATTTCCCTTAAAAAGAAGTACTTACCCA
CGGACCTGCAAAAGATGCAAACGCCCCTCAAGCCTTACCTCAGCCACGCC
CTGGAGGAGGTAGAGGCGGAGGAGACGGAGCGCAAGTTGCTAAATCCCTA
G
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protein sequence of NO04G03780.1

>NO04G03780.1-protein ID=NO04G03780.1-protein|Name=NO04G03780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=576bp
MVPSSKSASFWSHLLGRAFHKKCDAEEPGLRPPSPTESFKSSSGKDGHHV
FHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGI
IAAIDALCYSEMASRYPQAGTVFLYNHITFGELPALLGHRDGGRTKCDFD
EYQVFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLIL
TGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQ
ARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLL
AELLDVGVILAYGTVCAAVLVQRSTTRVNTTRWLVLLLPACALPFALHKY
NVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLA
GVVLNVYLGVNLNSAAWLRLAVLWAGLLVHYVWTEHQYFHGNGEKRGRQF
GERSGSRRYEGTENGVHSTMSVVAKIWDSLRTSYTRMVVGELNNYGLRYQ
DLFIEDPAVIKAVHHLSPEEQVSRERRIKRAIEISLKKKYLPTDLQKMQT
PLKPYLSHALEEVEAEETERKLLNP*
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Synonyms
Publications