jgi.p|Nanoce1779_2|295463, gene_2161 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|295463
Unique Namegene_2161
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:930873..933344 +

Link to JBrowse

Properties
Property NameValue
TranscriptId295549
ProteinId295463
Product nameAmino acid permease-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:930873..933344 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006865amino acid transport
Vocabulary: Molecular Function
TermDefinition
GO:0015171amino acid transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03780NO04G03780Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|295463mRNA_2161-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|295463mRNA_2161Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|295463

>mRNA_2161-protein ID=mRNA_2161-protein|Name=jgi.p|Nanoce1779_2|295463|organism=Nannochloropsis oceanica|type=polypeptide|length=624bp
MRHTSQPPPNCTSLRPPSPTESFKSSSGKDGHHVFHHLKRQLGFWQLTML
GVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRY
PQAGTVFLYNHITFGELPALLVSINLLVDYTVAAALIARSFALYLVEFLK
HAGLGPLPSWLASWPLTDIISLSLVAPLLLLLLTLVLCRGTETGAVLNVI
LTSIKVGVILIVCAVGLFHVHPPNWVPFFPHGIESVFRTSSTVFFSYVGF
DTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDL
AAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDG
LLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILA
YGTVCAAVLVQRSTTRVNTTRWLVLLLPACALPFALHKYNVHTGIWAMDT
ILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVN
LNSAAWLRLAVLWAGLLVHYVWTEHQYFHGNGEKRGRQFGERSGSRRYEG
TENGVVPYPPFESLRRRRGVGGGGSGQSQFGGGGGGRRRRGGEFISDALV
GRGRRRVDLRVQTSTHKIRSVQK*
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Synonyms
Publications