NO03G04440, NO03G04440 (gene) Nannochloropsis oceanica

Overview
NameNO03G04440
Unique NameNO03G04440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1826
Alignment locationchr3:1276858..1278683 +

Link to JBrowse

Properties
Property NameValue
DescriptionSorting and assembly machinery component 50 putative
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1276858..1278683 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0019867outer membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR000184Bac_surfAg_D15
Homology
[Close]
BLAST of NO03G04440 vs. NCBI_GenBank
Match: XP_009827620.1 (hypothetical protein H257_04711 [Aphanomyces astaci] >ETV82949.1 hypothetical protein H257_04711 [Aphanomyces astaci])

HSP 1 Score: 210.7 bits (535), Expect = 8.000e-51
Identity = 137/392 (34.95%), Postives = 199/392 (50.77%), Query Frame = 0 
Query:    1 MQEAASQNPGETDLLIKVAEKGIFTAYTGTSFTRDDINFEASGSLRNPTGYAESVEGTYSRSRLGNRSVRVNLSKPRVRGANVRLDCELHEDTLNYERTSSLREKVQALAFHLTTHNRRHRLTYEMALRDILPRRHLSTPFAYDASLSIMREATPSLKSAFKYKFIDDRRNDGVLPTGGTFFSGLLELAGLGVGDVAYVKAEVAGATHKPLGVGGICAH-------LSGVVGVVRPTSWRMREGVGEEGVPRTRFSDRYVLGGLQTMRGFGYSGLGPRAARKEGGCLKGDSLGGDLKYVATAALTMPVPLPLLDKFGLRWQVFADAGNLLPWS------APLASMLSDMRLSCGTGLAMSLGAARVELNYSLPFKRKGSDLEQRWQFGLAAH 380
            +++ A     ETD++I V E  + + Y G   +  +       +L NP G+AE +E + +  + G+     +  +P+  G           +   +ER SS REK +     ++ +N  H L + +  RDI+P R+   P  Y AS SIM EA PS KS+ KY + DD+RND  LPT G       E+AGL  GDV +VK E A   H  + +G +  H       LS  VG V           G + +   R SDR+ LGG  ++RGF + G+GPRA   +GG   GD+LGG++ Y   A+L  P PLPLL   G+R  VFA+AG+LL W+      A + ++L D R + G G+ ++    R+E NYS   K    D  +R Q GL  H
Sbjct:   72 LEKTADGTRNETDVVITVKESRMLSLYAGVESSGAEGTANTKCTLTNPLGHAEKIELSAAHGQYGSDGQNFSYRRPKFLGRPWWFTASAANEVQVHERFSSFREKFRGGTVSVSDYNGVHDLAFNLGWRDIVPVRNKKIPNTYAASPSIMAEAVPSTKSSVKYTYNDDQRNDPTLPTSGRLLRASAEVAGLW-GDVQFVKGE-AEVQHN-IPIGPVAFHHPIFNIMLSSRVGAV--------HSYGTDKLRPARISDRFFLGGPLSLRGFNHKGVGPRANPDDGGVKTGDALGGEVFYSVGASLGFPFPLPLLALLGVRGHVFANAGSLLAWNRILDEKAWIKNILDDSRAAAGVGVVIATRFGRLEANYSWVLKALPGDRVKRAQIGLGLH 452
[Close]
BLAST of NO03G04440 vs. NCBI_GenBank
Match: XP_008861809.1 (hypothetical protein H310_00714 [Aphanomyces invadans] >ETW10398.1 hypothetical protein H310_00714 [Aphanomyces invadans])

HSP 1 Score: 208.0 bits (528), Expect = 5.200e-50
Identity = 132/385 (34.29%), Postives = 194/385 (50.39%), Query Frame = 0 
Query:    1 MQEAASQNPGETDLLIKVAEKGIFTAYTGTSFTRDDINFEASGSLRNPTGYAESVEGTYSRSRLGNRSVRVNLSKPRVRGANVRLDCELHEDTLNYERTSSLREKVQALAFHLTTHNRRHRLTYEMALRDILPRRHLSTPFAYDASLSIMREATPSLKSAFKYKFIDDRRNDGVLPTGGTFFSGLLELAGLGVGDVAYVKAEVAGATHKPLGVGGICAHLSGVVGVVRPTSWRMREGVGEEGVPRTRFSDRYVLGGLQTMRGFGYSGLGPRAARKEGGCLKGDSLGGDLKYVATAALTMPVPLPLLDKFGLRWQVFADAGNLLPWSAPL------ASMLSDMRLSCGTGLAMSLGAARVELNYSLPFKRKGSDLEQRWQFGLAAH 380
            + ++A     ETD++I V E  + + Y G   +  +       +L NP G+AE VE + +  + G+     +  +P+  G           +   +ER SS REK +     ++ +N  H L + +  RDI+P R+   P  Y AS SIM EA PS KS+ KY F DD+RND  LPT G       E+AGL  GDV + K E     + P+G     A  + +  ++  +        G +     R SDR+ LGG  ++RGF + G+GPRA   +GG + GDSLGG++ Y   A+L  P PLPLL   G+R  VFA+AG ++ W+  L       ++L D R + G GL ++    R+E NYS   K    D  +R Q GL  H
Sbjct:   72 VDKSADGAHNETDVIITVKESRMLSLYAGVESSGVEGTANTKLTLTNPLGHAEQVELSAAHGQYGSDGQNFSYRRPKFLGRPWWFTATAANEVQVHERFSSFREKFRGGTVSISDYNGVHDLAFNLGWRDIVPVRNKKIPNTYAASPSIMAEAVPSTKSSVKYTFNDDQRNDSTLPTSGRLLRVSAEVAGLW-GDVHFTKGEAEIQHNFPIGP---IAFNNPIFNIMLSSRLGAVHSYGADKDRPARISDRFFLGGPLSLRGFNHKGVGPRANPDDGGVVTGDSLGGEVFYSVGASLGFPFPLPLLAMLGVRGHVFANAGTVMGWNRVLDEKNWMKNILDDTRAAAGVGLVVATRFGRLEANYSWVLKSLQGDRVKRAQIGLGMH 452
[Close]
BLAST of NO03G04440 vs. NCBI_GenBank
Match: GBG33292.1 (Sorting and assembly machinery component 50-like [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 194.9 bits (494), Expect = 4.600e-46
Identity = 130/382 (34.03%), Postives = 183/382 (47.91%), Query Frame = 0 
Query:    9 PGE---TDLLIKVAEKGI--FTAYTGTSFTRDDINFEASGSLRNPTGYAESVEGTYSRSRLGNRSVRVNLSKPRVRGANVRLDCELHEDTLNYERTSSLREKVQALAFHLTTHNRRHRLTYEMALRDILPRRHLSTPFAYDASLSIMREATPSLKSAFKYKFIDDRRNDGVLPTGGTFFSGLLELAGLGVGDVAYVKAEVAGATHKPL---GVGGICAHLSGVVGVV------RPTSWRMREGVGEEGVPRTRFSDRYVLGGLQTMRGFGYSGLGPRAARKEGGCLKGDSLGGDLKYVATAALTMPVPLPLLDKFGLRWQVFADAGNLLPWSAPLASMLSDMRLSCGTGLAMSLGAARVELNYSLPFKRKGSDLEQRWQFGL 377
            PG+   TD+ +KV EK +    A T    T  +   E + SL NP GY E +   +S     + S R+ + KPR RG N  LD      T++    SS  EK+Q     L  ++ RH +      RD++P R  S  + + AS  I+ +A PSLK++  Y F  DRR++   P+ G+F     E AG+G GD  + K EV      PL    + GI    +   GV+      R  S     GVG      T   DR+ LGG   +RGF + G GPR +    G   GDSLGGD  +     LT+P P  LL   G+R  ++A+AGNL  W     S++  MR + G G+       R+E NYS   +    D ++R+Q GL
Sbjct:  101 PGQAELTDITVKVREKRMVQLKAETYVQGTGSEGGVETALSLNNPVGYTEKINAAWSYGTKSSASARLEVQKPRFRGLNASLDVSASHSTVSRAIYSSYDEKIQGAQAVLRHNSGRHEIGAGCFWRDVMPVRSASNQYEFAASGLILAQAKPSLKNSIFYTFTQDRRDNPFGPSRGSFLQFRTEFAGMG-GDAHFAKGEVKVQQFLPLFADVISGIALGFTFQAGVLCPLATPRSASPDKLPGVGAS----THICDRFWLGGPLDLRGFNHKGAGPRTSPNRPGAQGGDSLGGDATWRLGTNLTLPFPHGLLHAAGVRCHLYANAGNLCAWETSFRSLVHGMRAAVGAGIVFPTAVGRIEANYSFVLRANSRDQQKRFQLGL 477
[Close]
BLAST of NO03G04440 vs. NCBI_GenBank
Match: CCA15973.1 (sorting and assembly machinery component 50 putativ [Albugo laibachii Nc14])

HSP 1 Score: 193.4 bits (490), Expect = 1.300e-45
Identity = 129/374 (34.49%), Postives = 184/374 (49.20%), Query Frame = 0 
Query:   11 ETDLLIKVAEKGIFTAYTGTSFTRDDINFEASGSLRNPTGYAESVEGTYSRSRLGNRSVRVNLSKPRVRGANVRLDCELHEDTLNYERTSSLREKVQALAFHLTTHNRRHRLTYEMALRDILPRRHLSTPFAYDASLSIMREATPSLKSAFKYKFIDDRRNDGVLPTGGTFFSGLLELAGLGVGDVAYVKAEVAGATHKPLGVGGICAHLSGVVGVVRPTSWRMREGVGEEGVPRTRFSDRYVLGGLQTMRGFGYSGLGPRAARKEGGCLKGDSLGGDLKYVATAALTMPVPLPLLDKFGLRWQVFADAGNLLPWSAPL------ASMLSDMRLSCGTGLAMSLGAARVELNYSLPFKRKGSDLEQRWQFGLAA 379
            E D+ I V EK       G +    +   E S +L N  G AE +  + S  R G+ +    L +PR  G  + L      +   +E  SS  EKV+     L     RH L+     RDI+P+R  + P  + AS SI+ +A PS+K++ KY F DD R+D +LP  G+      E+AGL  GDV +VK EV+   H   G       L   +     + + + + V +     +R SDR+ LGG  ++RGF Y G+GPRA+  +GG   GDSLGGDL Y A+A +  P P P+L   GLR QVF   GNL  W   L       ++ +D R+S G GL +     R+E +YS        D  +R Q G+ +
Sbjct: 1275 EVDVYINVKEKSWRKIKIGATTDGSEETAETSCTLTNAFGNAERLTLSASYGRTGSNTEAATLVQPRFMGLPLTLSINATNELHTHEAFSSYSEKVRGALVALCDEFGRHELSLHCGWRDIIPKRDKTIPTIFHASPSILAQAQPSVKTSVKYSFNDDDRDDPMLPCFGSLLHCSTEIAGL-YGDVKFVKTEVSAQKHTSFGPTMFQLPL---LNFSLSSRFGLLKTVRDNQEQDSRISDRFFLGGPLSLRGFHYKGVGPRASPTQGGVPSGDSLGGDLFYTASAHVGFPFPFPMLAMLGLRGQVFGSIGNLTTWDRVLHKKRWMRNLANDTRVSIGMGLVLPSSFGRLEASYSWIISALKHDHIRRGQIGIGS 1644
[Close]
BLAST of NO03G04440 vs. NCBI_GenBank
Match: CCA15974.1 (sorting and assembly machinery component 50 putativ [Albugo laibachii Nc14])

HSP 1 Score: 193.4 bits (490), Expect = 1.300e-45
Identity = 129/374 (34.49%), Postives = 184/374 (49.20%), Query Frame = 0 
Query:   11 ETDLLIKVAEKGIFTAYTGTSFTRDDINFEASGSLRNPTGYAESVEGTYSRSRLGNRSVRVNLSKPRVRGANVRLDCELHEDTLNYERTSSLREKVQALAFHLTTHNRRHRLTYEMALRDILPRRHLSTPFAYDASLSIMREATPSLKSAFKYKFIDDRRNDGVLPTGGTFFSGLLELAGLGVGDVAYVKAEVAGATHKPLGVGGICAHLSGVVGVVRPTSWRMREGVGEEGVPRTRFSDRYVLGGLQTMRGFGYSGLGPRAARKEGGCLKGDSLGGDLKYVATAALTMPVPLPLLDKFGLRWQVFADAGNLLPWSAPL------ASMLSDMRLSCGTGLAMSLGAARVELNYSLPFKRKGSDLEQRWQFGLAA 379
            E D+ I V EK       G +    +   E S +L N  G AE +  + S  R G+ +    L +PR  G  + L      +   +E  SS  EKV+     L     RH L+     RDI+P+R  + P  + AS SI+ +A PS+K++ KY F DD R+D +LP  G+      E+AGL  GDV +VK EV+   H   G       L   +     + + + + V +     +R SDR+ LGG  ++RGF Y G+GPRA+  +GG   GDSLGGDL Y A+A +  P P P+L   GLR QVF   GNL  W   L       ++ +D R+S G GL +     R+E +YS        D  +R Q G+ +
Sbjct: 1252 EVDVYINVKEKSWRKIKIGATTDGSEETAETSCTLTNAFGNAERLTLSASYGRTGSNTEAATLVQPRFMGLPLTLSINATNELHTHEAFSSYSEKVRGALVALCDEFGRHELSLHCGWRDIIPKRDKTIPTIFHASPSILAQAQPSVKTSVKYSFNDDDRDDPMLPCFGSLLHCSTEIAGL-YGDVKFVKTEVSAQKHTSFGPTMFQLPL---LNFSLSSRFGLLKTVRDNQEQDSRISDRFFLGGPLSLRGFHYKGVGPRASPTQGGVPSGDSLGGDLFYTASAHVGFPFPFPMLAMLGLRGQVFGSIGNLTTWDRVLHKKRWMRNLANDTRVSIGMGLVLPSSFGRLEASYSWIISALKHDHIRRGQIGIGS 1621
[Close]
BLAST of NO03G04440 vs. NCBI_GenBank
Match: CCA15976.1 (sorting and assembly machinery component 50 putativ [Albugo laibachii Nc14])

HSP 1 Score: 193.4 bits (490), Expect = 1.300e-45
Identity = 129/374 (34.49%), Postives = 184/374 (49.20%), Query Frame = 0 
Query:   11 ETDLLIKVAEKGIFTAYTGTSFTRDDINFEASGSLRNPTGYAESVEGTYSRSRLGNRSVRVNLSKPRVRGANVRLDCELHEDTLNYERTSSLREKVQALAFHLTTHNRRHRLTYEMALRDILPRRHLSTPFAYDASLSIMREATPSLKSAFKYKFIDDRRNDGVLPTGGTFFSGLLELAGLGVGDVAYVKAEVAGATHKPLGVGGICAHLSGVVGVVRPTSWRMREGVGEEGVPRTRFSDRYVLGGLQTMRGFGYSGLGPRAARKEGGCLKGDSLGGDLKYVATAALTMPVPLPLLDKFGLRWQVFADAGNLLPWSAPL------ASMLSDMRLSCGTGLAMSLGAARVELNYSLPFKRKGSDLEQRWQFGLAA 379
            E D+ I V EK       G +    +   E S +L N  G AE +  + S  R G+ +    L +PR  G  + L      +   +E  SS  EKV+     L     RH L+     RDI+P+R  + P  + AS SI+ +A PS+K++ KY F DD R+D +LP  G+      E+AGL  GDV +VK EV+   H   G       L   +     + + + + V +     +R SDR+ LGG  ++RGF Y G+GPRA+  +GG   GDSLGGDL Y A+A +  P P P+L   GLR QVF   GNL  W   L       ++ +D R+S G GL +     R+E +YS        D  +R Q G+ +
Sbjct: 1271 EVDVYINVKEKSWRKIKIGATTDGSEETAETSCTLTNAFGNAERLTLSASYGRTGSNTEAATLVQPRFMGLPLTLSINATNELHTHEAFSSYSEKVRGALVALCDEFGRHELSLHCGWRDIIPKRDKTIPTIFHASPSILAQAQPSVKTSVKYSFNDDDRDDPMLPCFGSLLHCSTEIAGL-YGDVKFVKTEVSAQKHTSFGPTMFQLPL---LNFSLSSRFGLLKTVRDNQEQDSRISDRFFLGGPLSLRGFHYKGVGPRASPTQGGVPSGDSLGGDLFYTASAHVGFPFPFPMLAMLGLRGQVFGSIGNLTTWDRVLHKKRWMRNLANDTRVSIGMGLVLPSSFGRLEASYSWIISALKHDHIRRGQIGIGS 1640
[Close]
BLAST of NO03G04440 vs. NCBI_GenBank
Match: CCA15977.1 (sorting and assembly machinery component 50 putativ [Albugo laibachii Nc14])

HSP 1 Score: 193.4 bits (490), Expect = 1.300e-45
Identity = 129/374 (34.49%), Postives = 184/374 (49.20%), Query Frame = 0 
Query:   11 ETDLLIKVAEKGIFTAYTGTSFTRDDINFEASGSLRNPTGYAESVEGTYSRSRLGNRSVRVNLSKPRVRGANVRLDCELHEDTLNYERTSSLREKVQALAFHLTTHNRRHRLTYEMALRDILPRRHLSTPFAYDASLSIMREATPSLKSAFKYKFIDDRRNDGVLPTGGTFFSGLLELAGLGVGDVAYVKAEVAGATHKPLGVGGICAHLSGVVGVVRPTSWRMREGVGEEGVPRTRFSDRYVLGGLQTMRGFGYSGLGPRAARKEGGCLKGDSLGGDLKYVATAALTMPVPLPLLDKFGLRWQVFADAGNLLPWSAPL------ASMLSDMRLSCGTGLAMSLGAARVELNYSLPFKRKGSDLEQRWQFGLAA 379
            E D+ I V EK       G +    +   E S +L N  G AE +  + S  R G+ +    L +PR  G  + L      +   +E  SS  EKV+     L     RH L+     RDI+P+R  + P  + AS SI+ +A PS+K++ KY F DD R+D +LP  G+      E+AGL  GDV +VK EV+   H   G       L   +     + + + + V +     +R SDR+ LGG  ++RGF Y G+GPRA+  +GG   GDSLGGDL Y A+A +  P P P+L   GLR QVF   GNL  W   L       ++ +D R+S G GL +     R+E +YS        D  +R Q G+ +
Sbjct: 1256 EVDVYINVKEKSWRKIKIGATTDGSEETAETSCTLTNAFGNAERLTLSASYGRTGSNTEAATLVQPRFMGLPLTLSINATNELHTHEAFSSYSEKVRGALVALCDEFGRHELSLHCGWRDIIPKRDKTIPTIFHASPSILAQAQPSVKTSVKYSFNDDDRDDPMLPCFGSLLHCSTEIAGL-YGDVKFVKTEVSAQKHTSFGPTMFQLPL---LNFSLSSRFGLLKTVRDNQEQDSRISDRFFLGGPLSLRGFHYKGVGPRASPTQGGVPSGDSLGGDLFYTASAHVGFPFPFPMLAMLGLRGQVFGSIGNLTTWDRVLHKKRWMRNLANDTRVSIGMGLVLPSSFGRLEASYSWIISALKHDHIRRGQIGIGS 1625
[Close]
BLAST of NO03G04440 vs. NCBI_GenBank
Match: CCA15978.1 (sorting and assembly machinery component 50 putativ [Albugo laibachii Nc14])

HSP 1 Score: 193.4 bits (490), Expect = 1.300e-45
Identity = 129/374 (34.49%), Postives = 184/374 (49.20%), Query Frame = 0 
Query:   11 ETDLLIKVAEKGIFTAYTGTSFTRDDINFEASGSLRNPTGYAESVEGTYSRSRLGNRSVRVNLSKPRVRGANVRLDCELHEDTLNYERTSSLREKVQALAFHLTTHNRRHRLTYEMALRDILPRRHLSTPFAYDASLSIMREATPSLKSAFKYKFIDDRRNDGVLPTGGTFFSGLLELAGLGVGDVAYVKAEVAGATHKPLGVGGICAHLSGVVGVVRPTSWRMREGVGEEGVPRTRFSDRYVLGGLQTMRGFGYSGLGPRAARKEGGCLKGDSLGGDLKYVATAALTMPVPLPLLDKFGLRWQVFADAGNLLPWSAPL------ASMLSDMRLSCGTGLAMSLGAARVELNYSLPFKRKGSDLEQRWQFGLAA 379
            E D+ I V EK       G +    +   E S +L N  G AE +  + S  R G+ +    L +PR  G  + L      +   +E  SS  EKV+     L     RH L+     RDI+P+R  + P  + AS SI+ +A PS+K++ KY F DD R+D +LP  G+      E+AGL  GDV +VK EV+   H   G       L   +     + + + + V +     +R SDR+ LGG  ++RGF Y G+GPRA+  +GG   GDSLGGDL Y A+A +  P P P+L   GLR QVF   GNL  W   L       ++ +D R+S G GL +     R+E +YS        D  +R Q G+ +
Sbjct: 1295 EVDVYINVKEKSWRKIKIGATTDGSEETAETSCTLTNAFGNAERLTLSASYGRTGSNTEAATLVQPRFMGLPLTLSINATNELHTHEAFSSYSEKVRGALVALCDEFGRHELSLHCGWRDIIPKRDKTIPTIFHASPSILAQAQPSVKTSVKYSFNDDDRDDPMLPCFGSLLHCSTEIAGL-YGDVKFVKTEVSAQKHTSFGPTMFQLPL---LNFSLSSRFGLLKTVRDNQEQDSRISDRFFLGGPLSLRGFHYKGVGPRASPTQGGVPSGDSLGGDLFYTASAHVGFPFPFPMLAMLGLRGQVFGSIGNLTTWDRVLHKKRWMRNLANDTRVSIGMGLVLPSSFGRLEASYSWIISALKHDHIRRGQIGIGS 1664
[Close]
BLAST of NO03G04440 vs. NCBI_GenBank
Match: CCA15979.1 (sorting and assembly machinery component 50 putativ [Albugo laibachii Nc14])

HSP 1 Score: 193.4 bits (490), Expect = 1.300e-45
Identity = 129/374 (34.49%), Postives = 184/374 (49.20%), Query Frame = 0 
Query:   11 ETDLLIKVAEKGIFTAYTGTSFTRDDINFEASGSLRNPTGYAESVEGTYSRSRLGNRSVRVNLSKPRVRGANVRLDCELHEDTLNYERTSSLREKVQALAFHLTTHNRRHRLTYEMALRDILPRRHLSTPFAYDASLSIMREATPSLKSAFKYKFIDDRRNDGVLPTGGTFFSGLLELAGLGVGDVAYVKAEVAGATHKPLGVGGICAHLSGVVGVVRPTSWRMREGVGEEGVPRTRFSDRYVLGGLQTMRGFGYSGLGPRAARKEGGCLKGDSLGGDLKYVATAALTMPVPLPLLDKFGLRWQVFADAGNLLPWSAPL------ASMLSDMRLSCGTGLAMSLGAARVELNYSLPFKRKGSDLEQRWQFGLAA 379
            E D+ I V EK       G +    +   E S +L N  G AE +  + S  R G+ +    L +PR  G  + L      +   +E  SS  EKV+     L     RH L+     RDI+P+R  + P  + AS SI+ +A PS+K++ KY F DD R+D +LP  G+      E+AGL  GDV +VK EV+   H   G       L   +     + + + + V +     +R SDR+ LGG  ++RGF Y G+GPRA+  +GG   GDSLGGDL Y A+A +  P P P+L   GLR QVF   GNL  W   L       ++ +D R+S G GL +     R+E +YS        D  +R Q G+ +
Sbjct: 1272 EVDVYINVKEKSWRKIKIGATTDGSEETAETSCTLTNAFGNAERLTLSASYGRTGSNTEAATLVQPRFMGLPLTLSINATNELHTHEAFSSYSEKVRGALVALCDEFGRHELSLHCGWRDIIPKRDKTIPTIFHASPSILAQAQPSVKTSVKYSFNDDDRDDPMLPCFGSLLHCSTEIAGL-YGDVKFVKTEVSAQKHTSFGPTMFQLPL---LNFSLSSRFGLLKTVRDNQEQDSRISDRFFLGGPLSLRGFHYKGVGPRASPTQGGVPSGDSLGGDLFYTASAHVGFPFPFPMLAMLGLRGQVFGSIGNLTTWDRVLHKKRWMRNLANDTRVSIGMGLVLPSSFGRLEASYSWIISALKHDHIRRGQIGIGS 1641
[Close]
BLAST of NO03G04440 vs. NCBI_GenBank
Match: CCA15981.1 (sorting and assembly machinery component 50 putativ [Albugo laibachii Nc14])

HSP 1 Score: 193.4 bits (490), Expect = 1.300e-45
Identity = 129/374 (34.49%), Postives = 184/374 (49.20%), Query Frame = 0 
Query:   11 ETDLLIKVAEKGIFTAYTGTSFTRDDINFEASGSLRNPTGYAESVEGTYSRSRLGNRSVRVNLSKPRVRGANVRLDCELHEDTLNYERTSSLREKVQALAFHLTTHNRRHRLTYEMALRDILPRRHLSTPFAYDASLSIMREATPSLKSAFKYKFIDDRRNDGVLPTGGTFFSGLLELAGLGVGDVAYVKAEVAGATHKPLGVGGICAHLSGVVGVVRPTSWRMREGVGEEGVPRTRFSDRYVLGGLQTMRGFGYSGLGPRAARKEGGCLKGDSLGGDLKYVATAALTMPVPLPLLDKFGLRWQVFADAGNLLPWSAPL------ASMLSDMRLSCGTGLAMSLGAARVELNYSLPFKRKGSDLEQRWQFGLAA 379
            E D+ I V EK       G +    +   E S +L N  G AE +  + S  R G+ +    L +PR  G  + L      +   +E  SS  EKV+     L     RH L+     RDI+P+R  + P  + AS SI+ +A PS+K++ KY F DD R+D +LP  G+      E+AGL  GDV +VK EV+   H   G       L   +     + + + + V +     +R SDR+ LGG  ++RGF Y G+GPRA+  +GG   GDSLGGDL Y A+A +  P P P+L   GLR QVF   GNL  W   L       ++ +D R+S G GL +     R+E +YS        D  +R Q G+ +
Sbjct: 1252 EVDVYINVKEKSWRKIKIGATTDGSEETAETSCTLTNAFGNAERLTLSASYGRTGSNTEAATLVQPRFMGLPLTLSINATNELHTHEAFSSYSEKVRGALVALCDEFGRHELSLHCGWRDIIPKRDKTIPTIFHASPSILAQAQPSVKTSVKYSFNDDDRDDPMLPCFGSLLHCSTEIAGL-YGDVKFVKTEVSAQKHTSFGPTMFQLPL---LNFSLSSRFGLLKTVRDNQEQDSRISDRFFLGGPLSLRGFHYKGVGPRASPTQGGVPSGDSLGGDLFYTASAHVGFPFPFPMLAMLGLRGQVFGSIGNLTTWDRVLHKKRWMRNLANDTRVSIGMGLVLPSSFGRLEASYSWIISALKHDHIRRGQIGIGS 1621
The following BLAST results are available for this feature:
BLAST of NO03G04440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009827620.18.000e-5134.95hypothetical protein H257_04711 [Aphanomyces astac... [more]
XP_008861809.15.200e-5034.29hypothetical protein H310_00714 [Aphanomyces invad... [more]
GBG33292.14.600e-4634.03Sorting and assembly machinery component 50-like [... [more]
CCA15973.11.300e-4534.49sorting and assembly machinery component 50 putati... [more]
CCA15974.11.300e-4534.49sorting and assembly machinery component 50 putati... [more]
CCA15976.11.300e-4534.49sorting and assembly machinery component 50 putati... [more]
CCA15977.11.300e-4534.49sorting and assembly machinery component 50 putati... [more]
CCA15978.11.300e-4534.49sorting and assembly machinery component 50 putati... [more]
CCA15979.11.300e-4534.49sorting and assembly machinery component 50 putati... [more]
CCA15981.11.300e-4534.49sorting and assembly machinery component 50 putati... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL066nonsL066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR048ngnoR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005494NSK005494Nannochloropsis salina (N. salina CCMP1776)gene


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667540gene_1646Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100017g27gene800Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04440.1NO03G04440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G04440.2NO03G04440.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G04440.3NO03G04440.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G04440.4NO03G04440.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04440.1NO03G04440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G04440.2NO03G04440.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G04440.3NO03G04440.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G04440.4NO03G04440.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04440 ID=NO03G04440|Name=NO03G04440|organism=Nannochloropsis oceanica|type=gene|length=1826bp
AGGAAGCTTGGCAAAGACTTGTTGAAGCTGTTGCTATTGGGCCTGGGGAA
GGATGGTGCGCGCAGACACGCCCTTGCGCATTAACCGCGTCGTTGTTGAA
Ggtcagttggatgggagggcttggagggggaggctataaccgctgtagac
acacttcacacattggcgcagttcacttccgcaccacaccacaactacag
GTAACAAGCGCACGGACCCATCGGTGATTGAGGATGAGTTGCAGGAGGCC
TACCGGGCCAGCACGGTAGAAGGCGTCCATCGAGGGCTGCAGAGGTACGT
GTTCAGATTATTTTTAAGGGTGGTTGGACGGACAGAGACGTCGCTTCGGC
TTGAGGCGCCTTCGTGCTCACTTCATCTTGCATGTAAGTCCAGAGCGAGA
CACTCATCGCCTGGGCTTGAGTGTAAGCAAGAACGGATGGCAAGCAGCCA
CTCTACGAGGTCATCATCTCTACCCTCCGTCATCCCCCAAACTTTCAAAC
CTCCTCACACCGCCCAACAGGGCAACCCAAAGCCTGCAAAGTCTTGGGAT
CTTCCACGGCATCGACATTCAAATGCAAGAAGCCGCTAGCCAAAACCCGG
GGGAAACCGACCTCCTTATCAAAGTAGCCGAAAAAGGCATCTTCACTGCC
TACACAGGCACAAGCTTCACCCGCGACGACATCAATTTCGAAGCCTCCGG
CTCCCTCCGCAACCCCACCGGGTACGCCGAAAGCGTCGAAGGCACCTATT
CCCGTTCTCGCCTTGGCAATCGTTCTGTTCGTGTAAACCTTAGCAAGCCC
CGCGTCCGTGGCGCCAACGTCCGTCTCGACTGCGAACTTCACGAAGATAC
GCTCAACTACGAACGCACTTCCTCGCTGCGCGAGAAAGTTCAAGCCCTGG
CATTTCATCTCACTACACACAATCGTCGCCATCGCCTCACGTACGAAATG
GCCTTGAGAGACATCCTCCCGAGGAGGCACCTTTCTACCCCCTTTGCCTA
CGACGCTTCTCTTTCCATAATGCGAGAAGCCACCCCCTCCCTCAAATCTG
CGTTCAAATACAAATTTATCGATGACCGGCGGAATGATGGTGTTTTACCC
ACAGGCGGGACCTTTTTTTCTGGGTTGTTGGAGCTAGCGGGACTGGGGGT
GGGAGATGTGGCGTATGTCAAAGCCGAAGTGGCGGGGGCCACTCATAAGC
CTCTCGGAGTCGGAGGGATCTGTGCGCATTTATCAGGCGTAGTGGGTGTG
GTGCGGCCGACGAGTTGGAGGATGAGGGAGGGAGTGGGGGAGGAAGGGGT
GCCAAGGACGAGGTTTAGTGACCGGTATGTGTTGGGGGGACTACAGACAA
TGAGAGGTTTTGGGTACTCTGGGCTGGGGCCACGGGCGGCGAGGAAGGAG
GGCGGATGTTTGAAGGGAGACTCTCTTGGCGGTGATTTGAAGTATGTGGC
AACGGCAGCATTGACGATGCCGGTACCTCTGCCGCTTCTCGATAAGTTTG
GGTTGAGGTGGCAAGTGTTCGCGGATGCCGGTAATTTGTTGCCCTGGTCC
GCGCCCTTGGCCAGCATGCTGAGTGATATGCGATTGTCGTGTGGGACGGG
CTTGGCGATGAGCTTGGGTGCTGCAAGGGTGGAATTGAACTATTCGTTAC
CGTTCAAGAGGAAGGGAAGTGACCTCGAGCAACGGTGGCAGTTCGGCTTG
GCGGCGCATATCGGGTAGATAGCAGAGGAGAGATGGACGAGAGATAAATA
GAAAAATTGAGGTAGAAAAGCGCACGCGCACTCATCAGCGATGCCATAAA
GTAAAAATATGGACGGACAAAGCAGG
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protein sequence of NO03G04440.1

>NO03G04440.1-protein ID=NO03G04440.1-protein|Name=NO03G04440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=382bp
MQEAASQNPGETDLLIKVAEKGIFTAYTGTSFTRDDINFEASGSLRNPTG
YAESVEGTYSRSRLGNRSVRVNLSKPRVRGANVRLDCELHEDTLNYERTS
SLREKVQALAFHLTTHNRRHRLTYEMALRDILPRRHLSTPFAYDASLSIM
REATPSLKSAFKYKFIDDRRNDGVLPTGGTFFSGLLELAGLGVGDVAYVK
AEVAGATHKPLGVGGICAHLSGVVGVVRPTSWRMREGVGEEGVPRTRFSD
RYVLGGLQTMRGFGYSGLGPRAARKEGGCLKGDSLGGDLKYVATAALTMP
VPLPLLDKFGLRWQVFADAGNLLPWSAPLASMLSDMRLSCGTGLAMSLGA
ARVELNYSLPFKRKGSDLEQRWQFGLAAHIG*
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protein sequence of NO03G04440.2

>NO03G04440.2-protein ID=NO03G04440.2-protein|Name=NO03G04440.2|organism=Nannochloropsis oceanica|type=polypeptide|length=447bp
MVRADTPLRINRVVVEGNKRTDPSVIEDELQEAYRASTVEGVHRGLQRAT
QSLQSLGIFHGIDIQMQEAASQNPGETDLLIKVAEKGIFTAYTGTSFTRD
DINFEASGSLRNPTGYAESVEGTYSRSRLGNRSVRVNLSKPRVRGANVRL
DCELHEDTLNYERTSSLREKVQALAFHLTTHNRRHRLTYEMALRDILPRR
HLSTPFAYDASLSIMREATPSLKSAFKYKFIDDRRNDGVLPTGGTFFSGL
LELAGLGVGDVAYVKAEVAGATHKPLGVGGICAHLSGVVGVVRPTSWRMR
EGVGEEGVPRTRFSDRYVLGGLQTMRGFGYSGLGPRAARKEGGCLKGDSL
GGDLKYVATAALTMPVPLPLLDKFGLRWQVFADAGNLLPWSAPLASMLSD
MRLSCGTGLAMSLGAARVELNYSLPFKRKGSDLEQRWQFGLAAHIG*
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protein sequence of NO03G04440.3

>NO03G04440.3-protein ID=NO03G04440.3-protein|Name=NO03G04440.3|organism=Nannochloropsis oceanica|type=polypeptide|length=382bp
MQEAASQNPGETDLLIKVAEKGIFTAYTGTSFTRDDINFEASGSLRNPTG
YAESVEGTYSRSRLGNRSVRVNLSKPRVRGANVRLDCELHEDTLNYERTS
SLREKVQALAFHLTTHNRRHRLTYEMALRDILPRRHLSTPFAYDASLSIM
REATPSLKSAFKYKFIDDRRNDGVLPTGGTFFSGLLELAGLGVGDVAYVK
AEVAGATHKPLGVGGICAHLSGVVGVVRPTSWRMREGVGEEGVPRTRFSD
RYVLGGLQTMRGFGYSGLGPRAARKEGGCLKGDSLGGDLKYVATAALTMP
VPLPLLDKFGLRWQVFADAGNLLPWSAPLASMLSDMRLSCGTGLAMSLGA
ARVELNYSLPFKRKGSDLEQRWQFGLAAHIG*
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protein sequence of NO03G04440.4

>NO03G04440.4-protein ID=NO03G04440.4-protein|Name=NO03G04440.4|organism=Nannochloropsis oceanica|type=polypeptide|length=382bp
MQEAASQNPGETDLLIKVAEKGIFTAYTGTSFTRDDINFEASGSLRNPTG
YAESVEGTYSRSRLGNRSVRVNLSKPRVRGANVRLDCELHEDTLNYERTS
SLREKVQALAFHLTTHNRRHRLTYEMALRDILPRRHLSTPFAYDASLSIM
REATPSLKSAFKYKFIDDRRNDGVLPTGGTFFSGLLELAGLGVGDVAYVK
AEVAGATHKPLGVGGICAHLSGVVGVVRPTSWRMREGVGEEGVPRTRFSD
RYVLGGLQTMRGFGYSGLGPRAARKEGGCLKGDSLGGDLKYVATAALTMP
VPLPLLDKFGLRWQVFADAGNLLPWSAPLASMLSDMRLSCGTGLAMSLGA
ARVELNYSLPFKRKGSDLEQRWQFGLAAHIG*
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Synonyms
Publications