NO03G01540, NO03G01540 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G01540 vs. NCBI_GenBank
Match: EWM29527.1 (dna repair rad54-like protein [Nannochloropsis gaditana]) HSP 1 Score: 828.9 bits (2140), Expect = 2.000e-236 Identity = 444/661 (67.17%), Postives = 491/661 (74.28%), Query Frame = 0 Query: 379 MGRGAILADDMGLGKTLQTIAVIWLLTKQSPYAHRTGGSSSSSDVEKAVVVAPSSLLGQWAAEVKKWLQVRLSFMVVDSAMGRALGKGDATEQVATFCTSSAQHSTVLFISYEGYRIHAAALNKCQQIGLLVCDEAHRLKEGGGKTQAALAACPARARLSLTGTPVQNDLEEFYTLVDFVNPGVLGALSSFRTHYIHPILKSRDPKAPLLTKQHGQQRTQEVMAVVSRFFLRRTAATVLKTLIPPKTSLVVMCRLTPVQRKLYQEVTRLAMLPGVMGNDPSVSSALGLKMIDALRKIVNHPRFFSAEV---LGEGXXXXXXXXXXLSEAAIIKVLRMTKASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLPSGMSGKLAVLEELLSAIYFMTPDRVVICSSYTNTLAMLQQMCERQAWSFLRLDGSVSISQRQGLVEAFNRGAGGATRRADQPFVFLLSTRAGGQGLNLVGGNRLVLFDSCFNPSADLQAQARVWRDGQTKPCVLYRLLSTGTMEEKVAIGRREGGREGKKKGADMKPYDTQPYKXXXXXXXXXXFQRQISKRELHSTLVEDAGHDVRNFSPDELRRLFVLSPAHVRCETYDLLRQGRXXXXXXXXXXXTRWKDYRGAEDISDACLKSVVEAGKEGGKLVSFVH 1037 MGRGAILADDMGLGKTLQTIA++W LT+QSP+ HR +DVEKAVVV PSSLL QWAAE+KKWLQVRLSFMVVDSAMG+ALGKGDA EQV TFCTSS QHSTVLFISYEGYRIHAAALN CQQIGLL+CDEAHRLKEG KT ALAA PA+ARL+LTGTPVQNDLEEFY+LVDFVNPGVLG LSSFR++YI PIL++RDPKA +TKQ G+QRT+EVMA+VSRFFLRRTAA VLKTLIPPKTSLVV CRL PVQRKLYQEV R+ ++PGVMG++P+V+SALGLKMIDALRKI NHP FFS EV E LSE+AIIK+LR T+++ A + P GMSGKLAV EELL AIY T DRVV+CSSYT +L MLQ +C+ + W LRLDGSVSISQR GLVEAFNRGAG R + PFVFLLSTRAGGQGLNLVGGNRL+LFDSCFNPSADLQAQARVWRDGQ KPCVLYRLLS GTMEEKV FQRQISKRELHSTLVE+ H+ RNFSPDELR+LFVL+ HVRCETYDLLR G WKDY G +DI DACL+SVVEA GG +V+FVH Sbjct: 1 MGRGAILADDMGLGKTLQTIALLWALTRQSPFQHR------YADVEKAVVVCPSSLLNQWAAELKKWLQVRLSFMVVDSAMGKALGKGDAKEQVNTFCTSSGQHSTVLFISYEGYRIHAAALNACQQIGLLICDEAHRLKEGASKTLVALAASPAQARLALTGTPVQNDLEEFYSLVDFVNPGVLGPLSSFRSNYISPILRARDPKASSVTKQCGEQRTREVMALVSRFFLRRTAAAVLKTLIPPKTSLVVFCRLAPVQRKLYQEVVRIGLMPGVMGHEPAVASALGLKMIDALRKICNHPCFFSTEVSPERSEDIGREGEGRGGLSESAIIKILRTTRSNSA-ADLDEDKKGGSKSGKMGGGKKSAGGQTRTSLRCPIGMSGKLAVTEELLEAIYAQTADRVVVCSSYTLSLDMLQDLCQARGWHVLRLDGSVSISQRHGLVEAFNRGAGCPAREKEDPFVFLLSTRAGGQGLNLVGGNRLILFDSCFNPSADLQAQARVWRDGQRKPCVLYRLLSAGTMEEKV-------------------------------------FQRQISKRELHSTLVENTAHETRNFSPDELRKLFVLAGPHVRCETYDLLRSG-----GGRAEGKREWKDYTGPKDIPDACLRSVVEAQGTGGSMVNFVH 612
BLAST of NO03G01540 vs. NCBI_GenBank
Match: XP_005855347.1 (DNA repair and recombination protein RAD54 and RAD54-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU21022.1 DNA repair and recombination protein RAD54 and RAD54-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 580.5 bits (1495), Expect = 1.200e-161 Identity = 311/453 (68.65%), Postives = 349/453 (77.04%), Query Frame = 0 Query: 390 GLGKTLQTIAVIWLLTKQSPYAHRTGGSSSSSDVEKAVVVAPSSLLGQWAAEVKKWLQVRLSFMVVDSAMGRALGKGDATEQVATFCTSSAQHSTVLFISYEGYRIHAAALNKCQQIGLLVCDEAHRLKEGGGKTQAALAACPARARLSLTGTPVQNDLEEFYTLVDFVNPGVLGALSSFRTHYIHPILKSRDPKAPLLTKQHGQQRTQEVMAVVSRFFLRRTAATVLKTLIPPKTSLVVMCRLTPVQRKLYQEVTRLAMLPGVMGNDPSVSSALGLKMIDALRKIVNHPRFFSAEV---LGEGXXXXXXXXXXLSEAAIIKVLRMTKASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLPSGMSGKLAVLEELLSAIYFMTPDRVVICSSYTNTLAMLQQMCERQAWSFLRLDGSVSISQRQGLVEAFNRGAGGATRRADQPFVFL 840 GLGKTLQTIA++W LT+QSP+ HR +DVEKAVVV PSSLL QWAAE+KKWLQVRLSFMVVDSAMG+ALGKGDA EQV TFCTSS QHSTVLFISYEGYRIHAAALN CQQIGLL+CDEAHRLKEG KT ALAA PA+ARL+LTGTPVQNDLEEFY+LVDFVNPGVLG LSSFR++YI PIL++RDPKA +TKQ G+QRT+EVMA+VSRFFLRRTAA VLKTLIPPKTSLVV CRL PVQRKLYQEV R+ ++PGVMG++P+V+SALGLKMIDALRKI NHP FFS EV E LSE+AIIK+LR T+++ A + P GMSGKLAV EELL AIY T DRVV+CSSYT +L MLQ +C+ + W LRLDGSVSISQR GLVEAFNRGAG R + PFVFL Sbjct: 1 GLGKTLQTIALLWALTRQSPFQHR------YADVEKAVVVCPSSLLNQWAAELKKWLQVRLSFMVVDSAMGKALGKGDAKEQVNTFCTSSGQHSTVLFISYEGYRIHAAALNACQQIGLLICDEAHRLKEGASKTLVALAASPAQARLALTGTPVQNDLEEFYSLVDFVNPGVLGPLSSFRSNYISPILRARDPKASSVTKQCGEQRTREVMALVSRFFLRRTAAAVLKTLIPPKTSLVVFCRLAPVQRKLYQEVVRIGLMPGVMGHEPAVASALGLKMIDALRKICNHPCFFSTEVSPERSEDIGREGEGRGGLSESAIIKILRTTRSNSA-ADLDEDKKGGSKSGKMGGGKKSAGGQTRTSLRCPIGMSGKLAVTEELLEAIYAQTADRVVVCSSYTLSLDMLQDLCQARGWHVLRLDGSVSISQRHGLVEAFNRGAGCPAREKEDPFVFL 446
BLAST of NO03G01540 vs. NCBI_GenBank
Match: XP_022100237.1 (DNA repair and recombination protein RAD54-like [Acanthaster planci] >XP_022100239.1 DNA repair and recombination protein RAD54-like [Acanthaster planci]) HSP 1 Score: 389.0 bits (998), Expect = 5.300e-104 Identity = 253/704 (35.94%), Postives = 367/704 (52.13%), Query Frame = 0 Query: 345 VVLDGFLGRVLRPHQREGVKFLWRCLTGRGNANRMGRGAILADDMGLGKTLQTIAVIWLLTKQSPYAHRTGGSSSSSDVEKAVVVAPSSLLGQWAAEVKKWLQVRLSFMVVDSAMGRALGKGDATEQVATFCTSSAQH--STVLFISYEGYRIHAAALNKCQQIGLLVCDEAHRLKEGGGKTQAALAACPARARLSLTGTPVQNDLEEFYTLVDFVNPGVLGALSSFRTHYIHPILKSRDPKAPLLTKQHGQQRTQEVMAVVSRFFLRRTAATVLKTLIPPKTSLVVMCRLTPVQRKLYQEVT--RLAMLPGVMGNDPSVSSALGLKMIDALRKIVNHPRFFSAEVLGEGXXXXXXXXXXLSEAAIIKVLRMTKASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLPSGMSGKLAVLEELLSAIYFMTPDRVVICSSYTNTLAMLQQMCERQAWSFLRLDGSVSISQRQGLVEAFNRGAGGATRRADQPFVFLLSTRAGGQGLNLVGGNRLVLFDSCFNPSADLQAQARVWRDGQTKPCVLYRLLSTGTMEEKVAIGRREGGREGKKKGADMKPYDTQPYKXXXXXXXXXXFQRQISKRELHSTLVEDAGHDVRNFSPDELRRLFVLSPAHVRCETYDLLRQGR---------XXXXXXXXXXXTRWKDYRGAEDISDACLKSVVEAGKEGGKLVSFV 1036 VV+D L +VLRPHQREGVKFLW C+TGR A G I+AD+MGLGKTLQ I + W L +QSP + +++K V+VAPSSL+ W E+ KWL +L+ + +DS K + + +F + + + + +L ISYE +R+HA L++ +GL++CDE HRLK +T AL A A+ R+ L+GTP+QNDL E+++LV FVN G+LG S F+ + PIL+ RD + KQ GQ++ E+ A+V++ +RRT+A + K L P K VV C+LTP+Q LY++ ++A G P+ SS L I L+K+ NHP + E+ L++ A L +SGK+ VL+ LL+ T ++VV+ S+YT TL + +Q+C + + F+RLDGS+SI +R +V+ FN F+F+LS++AGG GLNL+G NRLV+FD +NP+ D QA ARVWRDGQ K C +YRLL+TGT+EEK+ FQRQ K+ L S +V++ R+FS D+LR LF L+ A + +T+D ++ R W G I+D+ LK V+EA + VSFV Sbjct: 155 VVVDPLLSKVLRPHQREGVKFLWDCVTGRRIAG--SYGCIMADEMGLGKTLQCITLTWTLLRQSP--------DAKPELDKVVIVAPSSLVKNWHNEINKWLGSKLNALAIDSG-----SKQEIDANLESFLSQTGRRILNPILIISYETFRLHAGTLHR-GSVGLVICDEGHRLKNSENQTYQALNAMNAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTASEFKRKFELPILRGRDASSSDKDKQRGQEKLLELAALVNKCIIRRTSALLTKYL-PVKIEQVVCCKLTPLQSALYKQYVDRKVADCTGAPTGKPTASS---LSAITQLKKLCNHPALVHDKCRD-------------GESGFEGALQLFPADYRPGR------------------------------LQPDLSGKMLVLDYLLAVTRTTTSNKVVLVSNYTQTLDLFEQLCRLRGYIFVRLDGSMSIKKRAKMVDRFN-------SPTSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKECFIYRLLATGTIEEKI-------------------------------------FQRQAHKKALSSCVVDNEEDVERHFSLDQLRDLFPLNEATI-SDTHDKIKCRRCVNNIQARPPLPDTDCNSDLAHWNHCAGKRGITDSVLKQVLEADR-----VSFV 745
BLAST of NO03G01540 vs. NCBI_GenBank
Match: XP_011612729.1 (PREDICTED: DNA repair and recombination protein RAD54-like isoform X1 [Takifugu rubripes]) HSP 1 Score: 384.8 bits (987), Expect = 9.900e-103 Identity = 246/667 (36.88%), Postives = 357/667 (53.52%), Query Frame = 0 Query: 327 PVLEARQ--KGGREGRPMKAVVLDGFLGRVLRPHQREGVKFLWRCLTGRGNANRMGRGAILADDMGLGKTLQTIAVIWLLTKQSPYAHRTGGSSSSSDVEKAVVVAPSSLLGQWAAEVKKWLQVRLSFMVVDSAMGRALGKGDATEQVATFCTSSAQH--STVLFISYEGYRIHAAALNKCQQIGLLVCDEAHRLKEGGGKTQAALAACPARARLSLTGTPVQNDLEEFYTLVDFVNPGVLGALSSFRTHYIHPILKSRDPKAPLLTKQHGQQRTQEVMAVVSRFFLRRTAATVLKTLIPPKTSLVVMCRLTPVQRKLYQEVTRLAMLPGVM--GNDPSVSSALGLKMIDALRKIVNHPRFFSAEVLGEGXXXXXXXXXXLSEAAIIKVLRMTKASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLPSGMSGKLAVLEELLSAIYFMTPDRVVICSSYTNTLAMLQQMCERQAWSFLRLDGSVSISQRQGLVEAFNRGAGGATRRADQPFVFLLSTRAGGQGLNLVGGNRLVLFDSCFNPSADLQAQARVWRDGQTKPCVLYRLLSTGTMEEKVAIGRREGGREGKKKGADMKPYDTQPYKXXXXXXXXXXFQRQISKRELHSTLVEDAGHDVRNFSPDELRRLFVLSPAHVRCETYDLLR 988 P L A + K +E P+ VV+D LG+VLRPHQREGVKFLW C+TGR G I+AD+MGLGKTLQ I +IW L +QSP +++K +VV+PSSL+ W+ EV+KWL R++ + +D K D Q+ F + S +L ISYE +R+HAA L+K ++GL++CDE HRLK +T AL A A+ R+ ++GTP+QNDL E+++LV FVN G+LG F+ + PILK RD A +Q G+++ E+++VV+R +RRT + +L +P K VV CRLTP+Q++LYQ R A + G +VS+ L I +L+K+ NHP + + EG K + +SGK+ VL+ +L+ T D+VV+ S+YT TL + +++C + + ++RLDG++SI +R +VE FN ++ F+F+LS++AGG GLNL+G NRLV+FD +NP+ D QA ARVWRDGQ K C +YRLL+TGT+EEK+ QRQ K+ L S +V++ + R+FS ELR LF L+ V +T+D R Sbjct: 125 PTLSAHELIKADKEKVPVH-VVVDPVLGKVLRPHQREGVKFLWECVTGRRIPG--SYGCIMADEMGLGKTLQCITLIWTLLRQSP--------DFKPEIDKVIVVSPSSLVRNWSNEVQKWLGGRVTPLAIDGG-----SKDDIDRQLVNFISQYGLRVPSPILIISYETFRLHAAVLHK-GKVGLVICDEGHRLKNSDNQTYQALNAMAAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKGRDADANEKDRQAGEEKLTELISVVNRCLIRRT-SDILSKYLPVKIEQVVCCRLTPLQKELYQRFVRQAEPLDSLEEGGKMNVST---LSSITSLKKLCNHPALIYDKCV-EGAEGFQGALDLFPPGYCTKAVE------------------------------------------PHLSGKMLVLDYILAITKTTTDDKVVLVSNYTQTLDLFEKLCRSRRYQYVRLDGTMSIKKRAKIVERFN-------SPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQRKTCYIYRLLATGTIEEKI-------------------------------------LQRQAHKKALSSCVVDEEQNVERHFSLGELRELFSLNEDTV-SDTHDKFR 682
BLAST of NO03G01540 vs. NCBI_GenBank
Match: XP_011612730.1 (PREDICTED: DNA repair and recombination protein RAD54-like isoform X2 [Takifugu rubripes]) HSP 1 Score: 384.8 bits (987), Expect = 9.900e-103 Identity = 246/667 (36.88%), Postives = 357/667 (53.52%), Query Frame = 0 Query: 327 PVLEARQ--KGGREGRPMKAVVLDGFLGRVLRPHQREGVKFLWRCLTGRGNANRMGRGAILADDMGLGKTLQTIAVIWLLTKQSPYAHRTGGSSSSSDVEKAVVVAPSSLLGQWAAEVKKWLQVRLSFMVVDSAMGRALGKGDATEQVATFCTSSAQH--STVLFISYEGYRIHAAALNKCQQIGLLVCDEAHRLKEGGGKTQAALAACPARARLSLTGTPVQNDLEEFYTLVDFVNPGVLGALSSFRTHYIHPILKSRDPKAPLLTKQHGQQRTQEVMAVVSRFFLRRTAATVLKTLIPPKTSLVVMCRLTPVQRKLYQEVTRLAMLPGVM--GNDPSVSSALGLKMIDALRKIVNHPRFFSAEVLGEGXXXXXXXXXXLSEAAIIKVLRMTKASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLPSGMSGKLAVLEELLSAIYFMTPDRVVICSSYTNTLAMLQQMCERQAWSFLRLDGSVSISQRQGLVEAFNRGAGGATRRADQPFVFLLSTRAGGQGLNLVGGNRLVLFDSCFNPSADLQAQARVWRDGQTKPCVLYRLLSTGTMEEKVAIGRREGGREGKKKGADMKPYDTQPYKXXXXXXXXXXFQRQISKRELHSTLVEDAGHDVRNFSPDELRRLFVLSPAHVRCETYDLLR 988 P L A + K +E P+ VV+D LG+VLRPHQREGVKFLW C+TGR G I+AD+MGLGKTLQ I +IW L +QSP +++K +VV+PSSL+ W+ EV+KWL R++ + +D K D Q+ F + S +L ISYE +R+HAA L+K ++GL++CDE HRLK +T AL A A+ R+ ++GTP+QNDL E+++LV FVN G+LG F+ + PILK RD A +Q G+++ E+++VV+R +RRT + +L +P K VV CRLTP+Q++LYQ R A + G +VS+ L I +L+K+ NHP + + EG K + +SGK+ VL+ +L+ T D+VV+ S+YT TL + +++C + + ++RLDG++SI +R +VE FN ++ F+F+LS++AGG GLNL+G NRLV+FD +NP+ D QA ARVWRDGQ K C +YRLL+TGT+EEK+ QRQ K+ L S +V++ + R+FS ELR LF L+ V +T+D R Sbjct: 120 PTLSAHELIKADKEKVPVH-VVVDPVLGKVLRPHQREGVKFLWECVTGRRIPG--SYGCIMADEMGLGKTLQCITLIWTLLRQSP--------DFKPEIDKVIVVSPSSLVRNWSNEVQKWLGGRVTPLAIDGG-----SKDDIDRQLVNFISQYGLRVPSPILIISYETFRLHAAVLHK-GKVGLVICDEGHRLKNSDNQTYQALNAMAAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKGRDADANEKDRQAGEEKLTELISVVNRCLIRRT-SDILSKYLPVKIEQVVCCRLTPLQKELYQRFVRQAEPLDSLEEGGKMNVST---LSSITSLKKLCNHPALIYDKCV-EGAEGFQGALDLFPPGYCTKAVE------------------------------------------PHLSGKMLVLDYILAITKTTTDDKVVLVSNYTQTLDLFEKLCRSRRYQYVRLDGTMSIKKRAKIVERFN-------SPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQRKTCYIYRLLATGTIEEKI-------------------------------------LQRQAHKKALSSCVVDEEQNVERHFSLGELRELFSLNEDTV-SDTHDKFR 677
BLAST of NO03G01540 vs. NCBI_GenBank
Match: KKF21875.1 (DNA repair and recombination protein RAD54-like protein [Larimichthys crocea]) HSP 1 Score: 382.5 bits (981), Expect = 4.900e-102 Identity = 242/666 (36.34%), Postives = 357/666 (53.60%), Query Frame = 0 Query: 327 PVLEARQ--KGGREGRPMKAVVLDGFLGRVLRPHQREGVKFLWRCLTGRGNANRMGRGAILADDMGLGKTLQTIAVIWLLTKQSPYAHRTGGSSSSSDVEKAVVVAPSSLLGQWAAEVKKWLQVRLSFMVVDSAMGRALGKGDATEQVATFCTSSAQH--STVLFISYEGYRIHAAALNKCQQIGLLVCDEAHRLKEGGGKTQAALAACPARARLSLTGTPVQNDLEEFYTLVDFVNPGVLGALSSFRTHYIHPILKSRDPKAPLLTKQHGQQRTQEVMAVVSRFFLRRTAATVLKTLIPPKTSLVVMCRLTPVQRKLYQEVTRLAM-LPGVMGNDPSVSSALGLKMIDALRKIVNHPRFFSAEVLGEGXXXXXXXXXXLSEAAIIKVLRMTKASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLPSGMSGKLAVLEELLSAIYFMTPDRVVICSSYTNTLAMLQQMCERQAWSFLRLDGSVSISQRQGLVEAFNRGAGGATRRADQPFVFLLSTRAGGQGLNLVGGNRLVLFDSCFNPSADLQAQARVWRDGQTKPCVLYRLLSTGTMEEKVAIGRREGGREGKKKGADMKPYDTQPYKXXXXXXXXXXFQRQISKRELHSTLVEDAGHDVRNFSPDELRRLFVLSPAHVRCETYDLLR 988 P+L A K +E P+ VV+D LG+VLRPHQREGVKFLW C+TGR + G I+AD+MGLGKTLQ IA++W L +QSP + +++KA+VV+PSSL+ W EV KWL R++ + +D K D Q+ F + + +L ISYE +R+HA L+K ++GL++CDE HRLK +T AL A+ R+ ++GTP+QNDL E+++LV FVN G+LG F+ + PILK RD A +Q G+++ +E++++V+R +RRT + +L +P K VV CRLTP+Q++LY+ R A + + +VSS L I +L+K+ NHP + + EG K + +SGK+ VL+ +L+ T D+VV+ S+YT TL + +++C +++ ++RLDG++SI +R +VE FN ++ F+F+LS++AGG GLNL+G NRLV+FD +NP+ D QA ARVWRDGQ K C +YRLLSTGT+EEK+ QRQ K+ L S +V++ R+FS ELR LF L+ +T+D R Sbjct: 122 PILSAHDLIKAEKEKLPVH-VVVDPVLGKVLRPHQREGVKFLWECVTGRRISE--SYGCIMADEMGLGKTLQCIALMWTLLRQSP--------DAKPEIDKAIVVSPSSLVRNWYNEVGKWLGGRVTPVAIDGG-----SKDDIDRQLVNFISQRGLRAPTPILIISYETFRLHAEVLHK-GKVGLVICDEGHRLKNSDNQTYQALNTMSAQRRVLISGTPIQNDLLEYFSLVHFVNTGILGTAQEFKKRFELPILKGRDADASDKDRQTGEEKLKELISIVNRCLIRRT-SDILSKYLPVKIEQVVCCRLTPLQKELYKRFLRQAKPIETLQEGKINVSS---LSSITSLKKLCNHPALIYDKCV-EGEEGFEGALDLFPPGYCTKAVE------------------------------------------PQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRSRSYLYVRLDGTMSIKKRAKIVEKFN-------SPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKI-------------------------------------LQRQAHKKALSSCVVDEEQDVERHFSLGELRELFTLN-EETTSDTHDKFR 678
BLAST of NO03G01540 vs. NCBI_GenBank
Match: XP_019123536.1 (PREDICTED: DNA repair and recombination protein RAD54-like [Larimichthys crocea]) HSP 1 Score: 382.5 bits (981), Expect = 4.900e-102 Identity = 242/666 (36.34%), Postives = 357/666 (53.60%), Query Frame = 0 Query: 327 PVLEARQ--KGGREGRPMKAVVLDGFLGRVLRPHQREGVKFLWRCLTGRGNANRMGRGAILADDMGLGKTLQTIAVIWLLTKQSPYAHRTGGSSSSSDVEKAVVVAPSSLLGQWAAEVKKWLQVRLSFMVVDSAMGRALGKGDATEQVATFCTSSAQH--STVLFISYEGYRIHAAALNKCQQIGLLVCDEAHRLKEGGGKTQAALAACPARARLSLTGTPVQNDLEEFYTLVDFVNPGVLGALSSFRTHYIHPILKSRDPKAPLLTKQHGQQRTQEVMAVVSRFFLRRTAATVLKTLIPPKTSLVVMCRLTPVQRKLYQEVTRLAM-LPGVMGNDPSVSSALGLKMIDALRKIVNHPRFFSAEVLGEGXXXXXXXXXXLSEAAIIKVLRMTKASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLPSGMSGKLAVLEELLSAIYFMTPDRVVICSSYTNTLAMLQQMCERQAWSFLRLDGSVSISQRQGLVEAFNRGAGGATRRADQPFVFLLSTRAGGQGLNLVGGNRLVLFDSCFNPSADLQAQARVWRDGQTKPCVLYRLLSTGTMEEKVAIGRREGGREGKKKGADMKPYDTQPYKXXXXXXXXXXFQRQISKRELHSTLVEDAGHDVRNFSPDELRRLFVLSPAHVRCETYDLLR 988 P+L A K +E P+ VV+D LG+VLRPHQREGVKFLW C+TGR + G I+AD+MGLGKTLQ IA++W L +QSP + +++KA+VV+PSSL+ W EV KWL R++ + +D K D Q+ F + + +L ISYE +R+HA L+K ++GL++CDE HRLK +T AL A+ R+ ++GTP+QNDL E+++LV FVN G+LG F+ + PILK RD A +Q G+++ +E++++V+R +RRT + +L +P K VV CRLTP+Q++LY+ R A + + +VSS L I +L+K+ NHP + + EG K + +SGK+ VL+ +L+ T D+VV+ S+YT TL + +++C +++ ++RLDG++SI +R +VE FN ++ F+F+LS++AGG GLNL+G NRLV+FD +NP+ D QA ARVWRDGQ K C +YRLLSTGT+EEK+ QRQ K+ L S +V++ R+FS ELR LF L+ +T+D R Sbjct: 120 PILSAHDLIKAEKEKLPVH-VVVDPVLGKVLRPHQREGVKFLWECVTGRRISE--SYGCIMADEMGLGKTLQCIALMWTLLRQSP--------DAKPEIDKAIVVSPSSLVRNWYNEVGKWLGGRVTPVAIDGG-----SKDDIDRQLVNFISQRGLRAPTPILIISYETFRLHAEVLHK-GKVGLVICDEGHRLKNSDNQTYQALNTMSAQRRVLISGTPIQNDLLEYFSLVHFVNTGILGTAQEFKKRFELPILKGRDADASDKDRQTGEEKLKELISIVNRCLIRRT-SDILSKYLPVKIEQVVCCRLTPLQKELYKRFLRQAKPIETLQEGKINVSS---LSSITSLKKLCNHPALIYDKCV-EGEEGFEGALDLFPPGYCTKAVE------------------------------------------PQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRSRSYLYVRLDGTMSIKKRAKIVEKFN-------SPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKI-------------------------------------LQRQAHKKALSSCVVDEEQDVERHFSLGELRELFTLN-EETTSDTHDKFR 676
BLAST of NO03G01540 vs. NCBI_GenBank
Match: XP_013863536.1 (PREDICTED: DNA repair and recombination protein RAD54-like [Austrofundulus limnaeus]) HSP 1 Score: 382.1 bits (980), Expect = 6.400e-102 Identity = 248/667 (37.18%), Postives = 358/667 (53.67%), Query Frame = 0 Query: 327 PVLEARQ--KGGREGRPMKAVVLDGFLGRVLRPHQREGVKFLWRCLTGRGNANRMGRGAILADDMGLGKTLQTIAVIWLLTKQSPYAHRTGGSSSSSDVEKAVVVAPSSLLGQWAAEVKKWLQVRLSFMVVDSAMGRALGKGDATEQVATFCTSSAQH--STVLFISYEGYRIHAAALNKCQQIGLLVCDEAHRLKEGGGKTQAALAACPARARLSLTGTPVQNDLEEFYTLVDFVNPGVLGALSSFRTHYIHPILKSRDPKAPLLTKQHGQQRTQEVMAVVSRFFLRRTAATVLKTLIPPKTSLVVMCRLTPVQRKLYQEVTRLAM-LPGVMGNDPSVSSALGLKMIDALRKIVNHPR-FFSAEVLGEGXXXXXXXXXXLSEAAIIKVLRMTKASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLPSGMSGKLAVLEELLSAIYFMTPDRVVICSSYTNTLAMLQQMCERQAWSFLRLDGSVSISQRQGLVEAFNRGAGGATRRADQPFVFLLSTRAGGQGLNLVGGNRLVLFDSCFNPSADLQAQARVWRDGQTKPCVLYRLLSTGTMEEKVAIGRREGGREGKKKGADMKPYDTQPYKXXXXXXXXXXFQRQISKRELHSTLVEDAGHDVRNFSPDELRRLFVLSPAHVRCETYDLLR 988 PVL + + K +E P+ VV+D LG+VLRPHQREGV+FLW C+TGR G I+AD+MGLGKTLQ IA++W L +QSP A +++KA+VV+PSSL+ W EV KWL RLS + +D K + +Q+ F + + +L ISYE +R+HA L+K ++GL++CDE HRLK +T AL A + R+ ++GTP+QNDL E+++LV FVN G+LG F+ + PILK RD A +Q G+++ +E++ +V+R +RRT + +L +P K VV CRLTP+Q +LY+ R A L + S+SS L I +L+K+ NHP + V GEG + TKA + +SGK+ VL+ +L+ T D+VV+ S+YT TL + +++C + + ++RLDG++SI +R +VE FN + F+F+LS++AGG GLNL+G NRLV+FD +NP+ D QA ARVWRDGQ K C +YRLLSTGT+EEK+ QRQ K+ L S +V++ R+FS ELR LF L+ +T+D R Sbjct: 118 PVLSSHELIKADKEKLPVH-VVVDPVLGKVLRPHQREGVRFLWECVTGRRIPG--SYGCIMADEMGLGKTLQCIALMWTLLRQSPDAR--------PEIDKAIVVSPSSLVRNWYNEVGKWLGGRLSPVAIDGG-----SKEEIDKQLVNFISQHGLRVPTPILIISYETFRLHAEVLHK-GKVGLIICDEGHRLKNSDNQTYQALNAMGGQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKGRDADASDKERQTGEEKLKELIGIVNRCLIRRT-SDILSKYLPVKIEQVVCCRLTPLQTELYKLFLRQAKPLESLQEGKISISS---LSSITSLKKLCNHPALIYDRCVEGEGGFE--------GALDLFPPGYNTKA------------------------------------VEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRHRRYLYVRLDGTMSIKKRAKIVERFN-------SPQNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKI-------------------------------------LQRQAHKKALSSCVVDEEQDVERHFSLGELRELFTLN-EETSSDTHDKFR 674
BLAST of NO03G01540 vs. NCBI_GenBank
Match: XP_013783608.1 (DNA repair and recombination protein RAD54-like [Limulus polyphemus]) HSP 1 Score: 381.7 bits (979), Expect = 8.400e-102 Identity = 234/645 (36.28%), Postives = 348/645 (53.95%), Query Frame = 0 Query: 345 VVLDGFLGRVLRPHQREGVKFLWRCLTGRGNANRMGRGAILADDMGLGKTLQTIAVIWLLTKQSPYAHRTGGSSSSSDVEKAVVVAPSSLLGQWAAEVKKWLQVRLSFMVVDSAMGRALGKGDATEQVATFCTSSAQH--STVLFISYEGYRIHAAALNKCQQIGLLVCDEAHRLKEGGGKTQAALAACPARARLSLTGTPVQNDLEEFYTLVDFVNPGVLGALSSFRTHYIHPILKSRDPKAPLLTKQHGQQRTQEVMAVVSRFFLRRTAATVLKTLIPPKTSLVVMCRLTPVQRKLYQEVTRLAMLPGVMGNDPSVSSALGLKMIDALRKIVNHPRFFSAEVLGEGXXXXXXXXXXLSEAAIIKVLRMTKASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLPSGMSGKLAVLEELLSAIYFMTPDRVVICSSYTNTLAMLQQMCERQAWSFLRLDGSVSISQRQGLVEAFNRGAGGATRRADQPFVFLLSTRAGGQGLNLVGGNRLVLFDSCFNPSADLQAQARVWRDGQTKPCVLYRLLSTGTMEEKVAIGRREGGREGKKKGADMKPYDTQPYKXXXXXXXXXXFQRQISKRELHSTLVEDAGHDVRNFSPDELRRLFVLSPAHVRCETYDLLR 988 VV+D L +VLRPHQREGVKF+W C+TG+ + G I+AD+MGLGKTLQ I ++W L +QSP A T +EKA++VAPSSL+ W E+KKWL +R+ + +DS K + + + +F + + + +L ISYE +R+HA L++ ++GL++CDE HRLK +T AL A+ R+ L+GTP+QNDL E+++L+ FVN G+LG F+ Y PIL+ RD A + G+++ +E++++V+R +RRT AT+L +P K V+ C LTP+Q+ +Y + + V + VS++L L I L+K+ NHP + I + + L LP +SGK++VL+ L+ I T D+VV+ S+YT TL + +++C + + ++RLDGS+SI +R +VE FN F+F+LS++AGG GLNL+G NRLV+FD +NP+ D QA ARVWRDGQ K C +YRLL+TGT+EEK+ FQRQ K+ L S +V++ R+FS ELR LF L V +T+D L+ Sbjct: 150 VVVDPLLSKVLRPHQREGVKFMWDCVTGKQIPD--SYGCIMADEMGLGKTLQCITLVWTLLRQSPDAKPT--------IEKAIIVAPSSLVKNWYNEIKKWLGMRIDALAIDSGT-----KSEIDKNLKSFMNTHGRRPVNPILIISYETFRLHAEVLHR-SEVGLVICDEGHRLKNSDNQTYHALNKLNAKRRVLLSGTPIQNDLLEYFSLLHFVNQGILGTAHEFKRKYETPILRGRDAAATDKDHEKGKEKLEELISIVNRCMIRRT-ATILSKYLPVKVEQVICCSLTPLQKSIYSHIVHSKTISEVANENTKVSASLSL--ITTLKKLCNHP------------------------SLIYEQCQQRVKDLEGCLNLFPVGYDFKKL------------------LPE-LSGKMSVLDCTLAVIKSTTTDKVVLVSNYTQTLDLFEKLCRHRNYQYVRLDGSMSIKKRAKVVEQFN-------NPQSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDGQAMARVWRDGQKKQCFIYRLLTTGTIEEKI-------------------------------------FQRQTHKKALSSCVVDNEEDVQRHFSLAELRELFRLEENTV-SDTHDKLK 687
BLAST of NO03G01540 vs. NCBI_GenBank
Match: XP_020843301.1 (DNA repair and recombination protein RAD54-like [Phascolarctos cinereus] >XP_020843302.1 DNA repair and recombination protein RAD54-like [Phascolarctos cinereus]) HSP 1 Score: 380.6 bits (976), Expect = 1.900e-101 Identity = 239/654 (36.54%), Postives = 352/654 (53.82%), Query Frame = 0 Query: 337 REGRPMKAVVLDGFLGRVLRPHQREGVKFLWRCLTGRGNANRMGRGAILADDMGLGKTLQTIAVIWLLTKQSPYAHRTGGSSSSSDVEKAVVVAPSSLLGQWAAEVKKWLQVRLSFMVVDSAMGRALGKGDATEQVATFCT--SSAQHSTVLFISYEGYRIHAAALNKCQQIGLLVCDEAHRLKEGGGKTQAALAACPARARLSLTGTPVQNDLEEFYTLVDFVNPGVLGALSSFRTHYIHPILKSRDPKAPLLTKQHGQQRTQEVMAVVSRFFLRRTAATVLKTLIPPKTSLVVMCRLTPVQRKLYQEVTRLAM-LPGVMGNDPSVSSALGLKMIDALRKIVNHPRFFSAEVLGEGXXXXXXXXXXLSEAAIIKVLRMTKASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLPSGMSGKLAVLEELLSAIYFMTPDRVVICSSYTNTLAMLQQMCERQAWSFLRLDGSVSISQRQGLVEAFNRGAGGATRRADQPFVFLLSTRAGGQGLNLVGGNRLVLFDSCFNPSADLQAQARVWRDGQTKPCVLYRLLSTGTMEEKVAIGRREGGREGKKKGADMKPYDTQPYKXXXXXXXXXXFQRQISKRELHSTLVEDAGHDVRNFSPDELRRLFVLSPAHVRCETYDLLR 988 RE P+ VV+D L ++LRPHQREGVKFLW C+T R G I+AD+MGLGKTLQ I ++W L +QSP +++KAVVV+PSSL+ W+ EV KWL R+ + +D K + +++A+F S S +L ISYE +R+HA AL + +GL++CDE HRLK +T AL + R+ ++GTP+QNDL E+++LV FVN G+LG F+ H+ PILK RD A +Q G++R +E++++V+R +RRT + +L +P K VV CRLTP+Q +LY+ + A + + SVSS L I +L+K+ NHP + + E E + L + + + +SGK+ VL+ +L+ + D+VV+ S+YT TL + +++C + + ++RLDG++SI +R +VE FN + F+F+LS++AGG GLNL+G NRLV+FD +NP+ D QA ARVWRDGQ K C +YRLLS GT+EEK+ FQRQ K+ L S +V++ R+FS ELR LF L+ A + +T+D LR Sbjct: 136 REKLPVH-VVVDPILSKILRPHQREGVKFLWECVTSRRIPG--SHGCIMADEMGLGKTLQCITLMWTLLRQSP--------EGKPEIDKAVVVSPSSLVRNWSNEVHKWLGGRIQPLAIDGG-----SKEEIDQKLASFMNQRGSRVPSPILIISYETFRLHAEALQR-GSVGLVICDEGHRLKNSENQTYQALNSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKGRDADASEDARQKGEERLRELVSIVNRCLIRRT-SDILSKYLPVKIEQVVCCRLTPLQTELYRRFLKQAKPMEELRAGKMSVSS---LSSITSLKKLCNHPGLIYEKCVEE-------------EEGFVGALDLFPPGYSCK------------------------------SVEPQLSGKMLVLDYILAVTRRTSSDKVVLVSNYTQTLDLFERLCRLRRYLYVRLDGTMSIKKRAKVVERFN-------NPSSPDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKI-------------------------------------FQRQTHKKALSSCVVDEEQDVERHFSLGELRELFTLNEA-MPSDTHDKLR 680 The following BLAST results are available for this feature:
BLAST of NO03G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G01540 ID=NO03G01540|Name=NO03G01540|organism=Nannochloropsis oceanica|type=gene|length=5804bpback to top protein sequence of NO03G01540.1 >NO03G01540.1-protein ID=NO03G01540.1-protein|Name=NO03G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1218bpback to top Synonyms
Publications
|