NO02G02510, NO02G02510 (gene) Nannochloropsis oceanica

Overview
NameNO02G02510
Unique NameNO02G02510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2008
Alignment locationchr2:692310..694317 -

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Properties
Property NameValue
DescriptionTbc1 domain member 20
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:692310..694317 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035969Rab-GTPase_TBC_sf
IPR000195Rab-GTPase-TBC_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO02G02510 vs. NCBI_GenBank
Match: EWM30367.1 (tbc1 domain member 20 [Nannochloropsis gaditana])

HSP 1 Score: 534.6 bits (1376), Expect = 2.700e-148
Identity = 270/421 (64.13%), Postives = 320/421 (76.01%), Query Frame = 0
Query:    1 MSED-ARRNGRSTSMAQREKAIRDLIVQNPVPLEKLRALALAPGDGFCNNALRSVIWPKLLGLNRFESQPSFHDQVARNQWSDQIGRDVARSLWHYHMPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVRLHGHPFLRDLARKKEVHALNFPHVEWYKKEAPPDWLLREDRRREEGRSVRCKHTRQRRRQAYLAGVQMPSAAGVVGNEKKGA----LWSXXXXXXXXXXXXXXXXXXVGVAAVLFKLGE 417
            MSE+ A        +AQ+ K I+ LIVQNPVPL++LR+LAL+   GF +N LR VIWPKLLG NRFE +P F + VARNQWSDQI RDVARSLWHY +P AKKRKRG RRRLLA M+NALM+K  TLHYYQG HDV SV VLV+TED DLCFAVAERVAL+++GD+TRR DFSVL PLL+LL+PL+EA D DVG+CLRACG+HAYVCLPWVIAWWAHDCH+L + ARLFDAFLS PPLFP+Y+AAA+ILE K++LFALE +DFSAVH FLSRL S+PDLPVE ++ARAH +L + PPAKLV+  G PFLR+LAR +EVH LNFP   WY++EA PDW+L E+RRR + R VR KHTR+RRRQA+LAGV MP+       E   A     W+                  VG  AV+ KL E
Sbjct:    1 MSENGAGAKSSKCDIAQKIKVIQALIVQNPVPLDELRSLALSSDGGFISNDLRQVIWPKLLGFNRFELRPPFQNYVARNQWSDQISRDVARSLWHYRLPQAKKRKRGGRRRLLADMVNALMAKDSTLHYYQGLHDVFSVFVLVLTEDPDLCFAVAERVALFFMGDFTRRSDFSVLIPLLDLLIPLIEAFDADVGSCLRACGLHAYVCLPWVIAWWAHDCHDLAMIARLFDAFLSAPPLFPIYVAAALILEGKSDLFALESRDFSAVHRFLSRLPSQPDLPVEAILARAHGMLQAFPPAKLVQSQGSPFLRELARSREVHGLNFP-PPWYQREALPDWILLENRRRRDKRVVRSKHTRERRRQAHLAGVSMPAPPAKSPPEGPRAFGDRFWTYVSPSASFASTLVACAALVGCMAVILKLSE 420          
BLAST of NO02G02510 vs. NCBI_GenBank
Match: XP_004354942.1 (RabGAP/TBC domain-containing protein [Cavenderia fasciculata] >EGG16542.1 RabGAP/TBC domain-containing protein [Cavenderia fasciculata])

HSP 1 Score: 176.0 bits (445), Expect = 2.500e-40
Identity = 98/255 (38.43%), Postives = 150/255 (58.82%), Query Frame = 0
Query:   45 GFCNNALRSVIWPKLLGLNRFESQPSFHDQVARNQWSDQIGRDVARSLWHYHMPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKL 300
            GF N+ALR  IWP LL ++  +   + H+ +  ++ +DQ+ +DV RS+W +     K + R  +R  L ++INA++S HP LHY+QG+H++ S+L+LV  E   L FA+ ER++LY++ D    P FS ++ LL L+ PL+   D      L    + +   + W++ W+AH+   LE  ARL+D FLS  PL PLY +  +I   K+ L  LE   +  VHSF S L    DLP++ LI +  +LL  +PP KL
Sbjct:   52 GFVNSALRKKIWPLLLDIDS-DHIINHHNAIVEHKDTDQVAKDVERSMWRF--TKGKSKLRDQKRAELTRIINAILSLHPQLHYFQGYHEIGSILLLVTNE--TLSFAMLERLSLYHIND-NMLPSFSEVSKLLSLVFPLLSLLDNQTYQFLNDSQVQSMFTISWILTWFAHNFDELENIARLYDYFLSSHPLSPLYFSVVLINHFKSNLLVLE-CSYDVVHSFFSTLPE--DLPLDKLIKQTQQLLEKVPPKKL 297          
BLAST of NO02G02510 vs. NCBI_GenBank
Match: XP_012754037.1 (hypothetical protein SAMD00019534_059850 [Acytostelium subglobosum LB1] >GAM22810.1 hypothetical protein SAMD00019534_059850 [Acytostelium subglobosum LB1])

HSP 1 Score: 169.9 bits (429), Expect = 1.800e-38
Identity = 104/286 (36.36%), Postives = 167/286 (58.39%), Query Frame = 0
Query:   15 AQREKAIRDLIVQNPVPLEKLRALALAPGDGFCNNALRSVIWPKLLGLNRFESQPSFHDQ-VARNQWSDQIGRDVARSLWHYHMPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKL 300
            A++  AIR  + + PV +E LR  ++    GF NN +R+ +WP LL +N  +S+   H+  +  ++ +DQ+ +DV RS+W +     K + R  +R  L ++INA++S +P LHY+QG+H++ S+L++V  E   L FA+ ER++L ++GD + RP FS ++ +L LL PL+   D      +    +     + W+I W+AH+   LE TARLFD FL+  PL PLY   ++I   K +L  LE   +  VH + S L    DLP++ LI +  +L   +PP KL
Sbjct:   16 AKKITAIRQCLQRVPVDVEGLRRCSVTE-FGFVNNDIRTSVWPILLDIN--QSKIINHESAIIEHKDTDQVTKDVERSMWRF--TKGKSKLREKKRAELTRIINAILSLYPQLHYFQGYHEIGSILLMVTNE--RLSFAMLERLSLNHIGD-SMRPSFSEVSKILNLLFPLLSFVDKQTHQFIVNSEVQPMFAISWLITWFAHNFEELEPTARLFDFFLASHPLIPLYF--SLITYLKKDLLKLECA-YDTVHHYFSNLPD--DLPLDLLIQQTQKLYDKIPPKKL 288          
BLAST of NO02G02510 vs. NCBI_GenBank
Match: GAX97546.1 (Hypothetical protein PINS_005401, partial [Pythium insidiosum])

HSP 1 Score: 164.9 bits (416), Expect = 5.700e-37
Identity = 110/312 (35.26%), Postives = 170/312 (54.49%), Query Frame = 0
Query:    5 ARRNGRSTSMAQRE--KAIRDLIVQNPV-------PLEKLRALALAPGDGFCNNALRSVIWPKLLGLN-----RFESQPSFHDQVARNQWSDQIGRDVARSLWHYHMP-HAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVR 302
            ++R+ R+  + QRE  + +R L  ++           E+LR LA A G GF ++ALR  IWP LLG +       E +  F    A ++   Q+ +D+ RSLWHY +  + ++ +R  +R+ L  +INA+++ +  L+Y+QG+HD  SV +LV+   D   F     ++  Y  +   R +F  +   + LL PL+E  D ++   LR  G+  +  LPWVI W+AH+        RL+D FL   PLF LY +AA++LEA+  +   E  DF  +HS LS+L    DL  E ++ARA  L   LPP +LVR
Sbjct:  224 SQRDSRALEIKQRELRRLVRRLQSESDSTDDDKGRAFEELRKLAFARG-GFVSDALREAIWPLLLGTDTQLVVHREHEQHFTRLNAEHRDDGQVEKDIERSLWHYDVVLNIREGERRVKRKQLTTIINAVLNDNEALYYFQGYHDTCSVFLLVL--GDQRAFHAMRTLSATYHRE-PMRTNFDTVLHTIRLLFPLLETEDDELFLHLRESGVEPFFALPWVITWFAHELSRFSDVTRLYDVFLLSHPLFVLYTSAAVVLEARQRVLRTE-CDFGTLHSLLSKLPKTMDL--EKVLARAAVLFHRLPPDELVR 528          
BLAST of NO02G02510 vs. NCBI_GenBank
Match: XP_003286006.1 (hypothetical protein DICPUDRAFT_149933 [Dictyostelium purpureum] >EGC37442.1 hypothetical protein DICPUDRAFT_149933 [Dictyostelium purpureum])

HSP 1 Score: 159.5 bits (402), Expect = 2.400e-35
Identity = 91/295 (30.85%), Postives = 171/295 (57.97%), Query Frame = 0
Query:   15 AQREKAIRDLIVQNPVPLEKLRALALAPGDGFCNNALRSVIWPKLLGLNRFESQPSFHDQVARNQWSDQIGRDVARSLWHYHMPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPD-LPVETLIARAHRLLLSLPPAKLVRLHGHPFL 309
            A++ + I+D + +NP+ +E LR  A+    GF NN LR  IWP LL ++   +  +  + +  ++ +DQ+ +DV RS+W +     K + R  ++  L +++N+++S H  L+Y+QG+H++ SVL+L+   D+ L FA+ ER++L +  D    P+FS +  LL  + PLV   D +V   L   G+     + W++ W++H+   L++ AR++D FLS  P+  +Y + ++I   + +L  LE   F ++H+F +  ++ P+ L ++ +I  A +L+  +PP K+  +   P L
Sbjct:   10 AKKIRVIQDCL-ENPIDIEGLRMCAITE-FGFVNNVLRKRIWPILLNIDT-NNIINHSEHIIDHKDTDQVSKDVERSMWRF--TRGKTQLRNRKKPELTRIVNSVLSLHSNLYYFQGYHEIASVLLLI--TDESLAFAMLERLSLNHFSD-CMLPNFSEILKLLNYIFPLVSMVDQEVYDFLIKSGVQPMFAISWILTWFSHNLEELDLAARVYDYFLSSHPMASVYFSVSVITNLRDQLLKLE-CSFDSIHAFFT--SNLPENLDLDKIIFEADKLIDKIPPNKIQIISKEPLL 293          
BLAST of NO02G02510 vs. NCBI_GenBank
Match: XP_016605095.1 (hypothetical protein SPPG_07452 [Spizellomyces punctatus DAOM BR117] >KNC97055.1 hypothetical protein SPPG_07452 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 157.5 bits (397), Expect = 9.100e-35
Identity = 110/317 (34.70%), Postives = 164/317 (51.74%), Query Frame = 0
Query:   32 LEKLRALALAPGDGFCNNALRSVIWPKLLGLNRFESQPSFHDQVARNQWSDQIGRDVARSLWHYHMPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRAC-GIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVRLHGHPFLR-DLARKKEVHALNFPHVEWYKKEAPPDWLLREDRRREE 347
            LE LR LA + G GF N+++R  +WP LL  +  + +  F +     + + QI  DV RSL H   P   + +  + R+ L+ ++  ++S+H  LHYYQGFHDV SVL+LV+     L  A  E +AL+YL D+   P        + LL PL+         CL +  G   Y CL WVI W++HD  +L   ARLFD  ++  PL P+YLAAA++L    +L  LE  ++S VH FLS+  S  D  +E LI +A+ +    PP  + +    P  R  +  + +V     P  + Y  + P   L +  R  E+
Sbjct:   36 LEALRTLAASKG-GFVNHSIRRKVWPLLLH-SANKQREMFSEGADEQRDASQIALDVNRSLAHLLQPDTGETRLETLRKELSNLLLTVLSRHSYLHYYQGFHDVASVLLLVL--KPTLASACLEPLALFYLRDF-MAPSLQSSMNQISLLFPLIALVSPATHECLSSIEGFLPYFCLSWVITWYSHDIDDLSRIARLFDFLIASNPLMPVYLAAAVVLSQNEQLVELE-AEYSTVHHFLSKFPS--DANLEMLIKQAYNMYKLHPPEAVQKSAKLPLGRASVVNRFKVDFERLPLTQEYDDQLPQKLLNQHVREVEK 344          
BLAST of NO02G02510 vs. NCBI_GenBank
Match: PRP79899.1 (hypothetical protein PROFUN_12388 [Planoprotostelium fungivorum])

HSP 1 Score: 156.8 bits (395), Expect = 1.500e-34
Identity = 95/294 (32.31%), Postives = 160/294 (54.42%), Query Frame = 0
Query:   15 AQREKAIRDLIVQ-NPVPLEKLRALALAPGDGFCNNALRSVIWPKLLGLNRFESQPSFHDQVARNQWSDQIGRDVARSLWHYHMPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDY-TRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVRLHGHP 307
            A R K IR L+   NP   E LR  A+    G  N+ +R + WP LL ++    +       A+++  DQ+ +DV RS++ +     +     ++R+ L+++IN L+ KHP LHYYQG+HDV SV +++  E           + +  + D     P       +L LL PL++ AD ++   +   G+H Y  + W++ W++H   NL+  +RLFD F++  PL PLY++  +I+  + EL    + +F +VHSFLS++     LP + +I+R+ +L  +LPP +L +L  HP
Sbjct:    7 AARAKEIRRLLDDPNPRNFELLRRHAIE--GGLINDEIRKIAWPMLLKVSS-TPEIDLEKVEAQHKDMDQVEKDVDRSMFKFSA--GRNDFMMAKRKQLSRIINTLLFKHPELHYYQGYHDVCSVFLMITGEG----IRTVAIIEMQLMKDRDALDPTLESTKDILSLLFPLLQFADPELYLYIEKSGVHPYFAISWILTWFSHGFDNLKDISRLFDVFIASHPLMPLYVSCQIIIHFRKELLETVECEFCSVHSFLSKIPQH--LPFDDIISRSVQLQHNLPPERLQKLAHHP 289          
BLAST of NO02G02510 vs. NCBI_GenBank
Match: PRP79918.1 (hypothetical protein PROFUN_12407 [Planoprotostelium fungivorum])

HSP 1 Score: 156.8 bits (395), Expect = 1.500e-34
Identity = 95/294 (32.31%), Postives = 160/294 (54.42%), Query Frame = 0
Query:   15 AQREKAIRDLIVQ-NPVPLEKLRALALAPGDGFCNNALRSVIWPKLLGLNRFESQPSFHDQVARNQWSDQIGRDVARSLWHYHMPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDY-TRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVRLHGHP 307
            A R K IR L+   NP   E LR  A+    G  N+ +R + WP LL ++    +       A+++  DQ+ +DV RS++ +     +     ++R+ L+++IN L+ KHP LHYYQG+HDV SV +++  E           + +  + D     P       +L LL PL++ AD ++   +   G+H Y  + W++ W++H   NL+  +RLFD F++  PL PLY++  +I+  + EL    + +F +VHSFLS++     LP + +I+R+ +L  +LPP +L +L  HP
Sbjct:    7 AARAKEIRRLLDDPNPRNFELLRRHAIE--GGLINDEIRKIAWPMLLKVSS-TPEIDLEKVEAQHKDMDQVEKDVDRSMFKFSA--GRNDFMMAKRKQLSRIINTLLFKHPELHYYQGYHDVCSVFLMITGEG----IRTVAIIEMQLMKDRDALDPTLESTKDILSLLFPLLQFADPELYLYIEKSGVHPYFAISWILTWFSHGFDNLKDISRLFDVFIASHPLMPLYVSCQIIIHFRKELLETVECEFCSVHSFLSKIPQH--LPFDDIISRSVQLQHNLPPERLQKLAHHP 289          
BLAST of NO02G02510 vs. NCBI_GenBank
Match: ORZ31156.1 (rab-GTPase-TBC domain-domain-containing protein [Catenaria anguillulae PL171])

HSP 1 Score: 155.2 bits (391), Expect = 4.500e-34
Identity = 107/330 (32.42%), Postives = 163/330 (49.39%), Query Frame = 0
Query:    1 MSEDARRNGRSTSMAQREKAIRDLIVQNPVPLEKLRALALAPGDGFCNNALRSVIWPKLLGLNRFESQ--------PSFHDQVARNQWSDQIGRDVARSLWHYH---------------MPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLVRLHGHPF 308
            MS  +   G ++S +  E  +R+ I ++ V     R   L    GF    LR   WP LL      S          S  D      ++ QI  DV RS  H+                 P  K R++   +R+L +    L +++P LHYYQG HDV ++L+LV+  D+ L     E +AL++L D     +   +  L+  +LP++++ D D+   L  C +H Y CL W I+W++HD    +   RLFD FLS  P+ P+Y+AAA++LE K +L  L D+++  VHSFLS++    D+PV+T I  A RL    P A +  + G  F
Sbjct:    1 MSSASAGAGSTSSTSVDEINVREAIERHDV----ARLRQLGQQHGFFTTNLRRRAWPILLRCPSSTSSASGSSSPVESAFDASLSTSYAHQIKLDVNRSFVHFKDQLHPSPPANPTAEPPPSIKARRQAQLQRILVR----LCARYPFLHYYQGLHDVCTILLLVL--DEHLASKAVENLALFFLRD-AMHTNIEPVMQLMRAILPIIKSEDRDIYRLLEECELHPYFCLSWFISWFSHDLREFDKACRLFDLFLSSNPIMPIYVAAAVVLERKEDLMEL-DREYPIVHSFLSKVPQ--DVPVDTWIQHALRLYRRYPLATIQGMTGWQF 316          
BLAST of NO02G02510 vs. NCBI_GenBank
Match: KYQ90188.1 (RabGAP/TBC domain-containing protein [Tieghemostelium lacteum])

HSP 1 Score: 154.1 bits (388), Expect = 1.000e-33
Identity = 93/290 (32.07%), Postives = 165/290 (56.90%), Query Frame = 0
Query:   10 RSTSMAQREKAIRDLIVQNPVPLEKLRALALAPGDGFCNNALRSVIWPKLLGLNRFESQPSFHDQVARNQWSDQIGRDVARSLWHYHMPHAKKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLCFAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACGIHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEAKTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKL 300
            R  + A++ + I+  + Q+P+ ++ L+  +++   GF N ALR  IWP LL ++  ++      ++  +  +DQ+ +DV RS+W +     K + R  ++  L  ++NA++S H  LHY+QG+H++ SVL+LV   D+ L FA+ ER++LY+  D    P F+ +  +L LL PL++  +  +   +    +     + WV+ W++H+   LE  +R++D FLS  PL  LY +A +I   K  L  LE   +  VH++ + L    +LP++ LI + + LLL +PP KL
Sbjct:    5 RERNEAKKIRIIQGYLNQSPIDIDGLKQCSVSE-FGFVNAALRRRIWPLLLNIDT-KNLIQHRQKIIDHPETDQVLKDVERSMWRF--TKGKSQLRNRKKPELMNIVNAILSIHKELHYFQGYHEIGSVLLLV--TDESLAFAMLERLSLYHFRD-CMYPTFASVLNILHLLFPLIQQINTQLYNFIIQSQVQPLFAISWVLTWFSHNLEELEYASRVYDFFLSSHPLASLYFSAVVIDYLKDGLLDLE-CSYDTVHAYFTHLPE--NLPLDHLIKQTNDLLLKIPPNKL 284          
The following BLAST results are available for this feature:
BLAST of NO02G02510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30367.12.700e-14864.13tbc1 domain member 20 [Nannochloropsis gaditana][more]
XP_004354942.12.500e-4038.43RabGAP/TBC domain-containing protein [Cavenderia f... [more]
XP_012754037.11.800e-3836.36hypothetical protein SAMD00019534_059850 [Acytoste... [more]
GAX97546.15.700e-3735.26Hypothetical protein PINS_005401, partial [Pythium... [more]
XP_003286006.12.400e-3530.85hypothetical protein DICPUDRAFT_149933 [Dictyostel... [more]
XP_016605095.19.100e-3534.70hypothetical protein SPPG_07452 [Spizellomyces pun... [more]
PRP79899.11.500e-3432.31hypothetical protein PROFUN_12388 [Planoprotosteli... [more]
PRP79918.11.500e-3432.31hypothetical protein PROFUN_12407 [Planoprotosteli... [more]
ORZ31156.14.500e-3432.42rab-GTPase-TBC domain-domain-containing protein [C... [more]
KYQ90188.11.000e-3332.07RabGAP/TBC domain-containing protein [Tieghemostel... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006895NSK006895Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02510.1NO02G02510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574314gene_840Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100026g52gene253Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02510.1NO02G02510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02510 ID=NO02G02510|Name=NO02G02510|organism=Nannochloropsis oceanica|type=gene|length=2008bp
TGCAAGTCTGAGGTGCAACAGTCAAGTGGTCCGCCGCACTAACACAGCAC
ACACACAAGATACAGGTGTGCACTGATAGGAAAGGAGCAGCAACAATACG
AACGTCTCGTTGTCTACCTGCCCTGGAGCTGGAGTCTCGCTAGTGGCCAC
TCGTTGACTTAGCCAGCCGAGAGCCTCCCTCCCTCCCTCCCTCCCACCCC
GCTATCCGCCCACAATCCCTAGGGGCTGCCCTGGCACTCAATGTCTGAGG
ATGCCAGAAGAAACGGCCGCAGTACCTCCATGGCACAAAGAGAGAAGGCC
ATTCGAGATCTCATCGTCCAAAATCCTGTGCCTTTGGAGAAGCTTAGGGC
CTTGgtaagtcgccatcgaaatcgatttccacaagcccattggcagattc
ccaaaacccttatcttcgcttgccctacccgcgatcccgatgcatacatg
ttgccctgaagctctcctcaacgtgctggggtcctacaattattgaaacc
cctcccaccaagacccatttcgcttgcccacaacgcacgcacacgtcctc
ctaattgaaccctttccgcatctctgcccccttcgtagGCCCTGGCCCCC
GGTGATGGATTCTGTAACAATGCGCTTCGATCCGTGATATGGCCAAAGCT
ATTGGGCCTCAACCGCTTCGAATCTCAGCCCTCCTTCCATGACCAAGTGG
CGCGCAATCAATGGAGTGACCAAATCGGGCGTGACGTCGCTCGCTCGCTC
TGGCACTACCACATGCCGCATGCCAAGAAGCGGAAGCGAGGGAGTCGAAG
AAGGCTGCTAGCGAAGATGATCAACGCCTTGATGAGCAAGCATCCGACTC
TTCACTACTATCAAGGTTTTCACGACGTCCTCTCTGTCCTCGTCCTCGTC
ATGACTGAAGACGATGATCTTTGCTTCGCAGTTGCTGAGCGGGTAGCCCT
CTACTATCTAGGTGATTATACCCGCCGACCAGACTTCTCTGTGCTCACCC
CTCTATTAGAACTGCTTCTCCCCCTCGTCGAAGCTGCTGATGGCGACGTC
GGTGCTTGCCTCCGGGCGTGTGGCATCCACGCATACGTGTGCTTGCCATG
GGTCATTGCTTGGTGGGCGCATGATTGTCATAATCTCGAAATAACAGCTC
GATTGTTCGATGCCTTTCTGTCAGGCCCTCCCTTATTTCCTCTCTACCTT
GCCGCCGCCATGATCCTGGAAGCCAAAACCGAGCTTTTTGCTTTGGAGGA
CAAGGACTTCTCCGCAGTCCACTCCTTCCTCTCCCGCCTTGCCTCCCGTC
CCGACTTACCGGTGGAAACCCTCATCGCCCGTGCACATCGCTTGCTTCTC
TCCCTTCCTCCTGCCAAACTCGTTCGACTGCATGGTCACCCTTTCTTGAG
AGACCTGGCGAGGAAGAAAGAAGTGCACGCTTTGAATTTTCCTCATGTGG
AATGGTATAAAAAAGAAGCTCCCCCTGATTGGTTGCTGCGCGAAGATCGA
CGACGGGAGGAAGGACGGAGTGTCCGGTGCAAACACACGAGACAGCGACG
CCGACAGGCTTACCTAGCGGGAGTCCAGATGCCATCAGCGGCGGGTGTTG
TGGGTAACGAGAAAAAAGGGGCGTTGTGGTCGTCGGCTTCGTCGCCGCCT
TCCTCCACCTCACTCTGGGTGGCTGCGGCGGCCGTGGTGGGGGTGGCGGC
GGTCTTGTTCAAACTGGGGGAAGGGGATTTGATGGAGCTTTGGTATAACA
GAATGTCATGAGTAAATGTATCACCTGCAGGTATGTGCGTTTGGAGTGAA
ATTGTTTTCATTTTATGGAACGAGGTAGGGAGAAGATTTTGGCCAGCCAA
ATTGATAGGTTAGACGGATATCTGTTTATGTACGTATAGACAGTAGTGTG
TATATGCTTGTAAATTTATAATTTTGGCATTTGTTACCGAGGTTAAGAAC
TCAACGCATTTCGTGGGAACTGAGATGGAATGGGCCAAGAGCCAAAAAGA
CGCTGATA
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protein sequence of NO02G02510.1

>NO02G02510.1-protein ID=NO02G02510.1-protein|Name=NO02G02510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=429bp
MSEDARRNGRSTSMAQREKAIRDLIVQNPVPLEKLRALALAPGDGFCNNA
LRSVIWPKLLGLNRFESQPSFHDQVARNQWSDQIGRDVARSLWHYHMPHA
KKRKRGSRRRLLAKMINALMSKHPTLHYYQGFHDVLSVLVLVMTEDDDLC
FAVAERVALYYLGDYTRRPDFSVLTPLLELLLPLVEAADGDVGACLRACG
IHAYVCLPWVIAWWAHDCHNLEITARLFDAFLSGPPLFPLYLAAAMILEA
KTELFALEDKDFSAVHSFLSRLASRPDLPVETLIARAHRLLLSLPPAKLV
RLHGHPFLRDLARKKEVHALNFPHVEWYKKEAPPDWLLREDRRREEGRSV
RCKHTRQRRRQAYLAGVQMPSAAGVVGNEKKGALWSSASSPPSSTSLWVA
AAAVVGVAAVLFKLGEGDLMELWYNRMS*
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Synonyms
Publications